mRNA_14343 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176890
Unique NamemRNA_14343
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A835Z9E0_9STRA (MoaB/Mog domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E0_9STRA)

HSP 1 Score: 503 bits (1294), Expect = 2.910e-179
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 
Query:    1 MPGEQVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETVVSLEAQERGELVRAEAALSELVARVNPDVRPHRCIKASAAKAKAKATAATQSKL 813
            MPGEQVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETVVSLEAQERGELVRAEAALSELVARVNPDVRPHRCIKASAAKAKAKATAATQSKL
Sbjct:    1 MPGEQVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETVVSLEAQERGELVRAEAALSELVARVNPDVRPHRCIKASAAKAKAKATAATQSKL 271
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A3A0FRE8_9PROT (Competence/damage-inducible protein A n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3A0FRE8_9PROT)

HSP 1 Score: 166 bits (419), Expect = 6.730e-47
Identity = 97/240 (40.42%), Postives = 151/240 (62.92%), Query Frame = 1 
Query:   19 TVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESP-ETVVSLEAQERGELVRAEAALSELVARVNPD 735
            T AIVV+G+E+LSG+V D NS +L  +LR  G  +  I  IPD++D+IA  VR+ + ++ +V T+GG+GPTHDD+T +GVAKAFG  ++V   +VA ++R     A    ++S  K+A LP  A+L+      +PV  V NV I PG+P L++ +FD  R+ F+G         +   E+DI   LN+L+ AHP + +GSYP+  E+  + +++LE+++ G + RA   L EL+AR+  D
Sbjct:    3 TAAIVVIGNEILSGKVVDTNSPYLCRELRALGVEVDRIVVIPDEIDVIAREVRQQSETHDWVFTSGGVGPTHDDLTMDGVAKAFGLPVEVNEAIVARIERALKQPA----NESQRKMAALPRGALLIDAGDLWFPVVVVENVHIFPGIPELLQKKFDAIRSRFQGVPFVLRRVYVRRKESDIAHELNALLEAHPELMLGSYPRIRETEYQVLLTLESRDEGYVQRA---LEELLARLPSD 235
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A2D6BQP8_9DELT (MoCF_biosynth domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BQP8_9DELT)

HSP 1 Score: 161 bits (407), Expect = 7.400e-45
Identity = 92/245 (37.55%), Postives = 149/245 (60.82%), Query Frame = 1 
Query:    4 PGEQVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESP-ETVVSLEAQERGELVRAEAALSELVARVNPD 735
            P    T  I+++G+E+LSG+V D NS +L  +LR+ G  +  I TIPD++D+I+A VR ++ +   V T+GGIGPTHDD+T +GVA AFG  L+  A +   ++R  G    +A ++S +K+AM+P +A L+      +PV  V NV + PG+P L+R +F+  R  FRG         +   E+DI  +LN L+  HP + +GSYP+  E     +++LE+++ G L +A   L +L++++  D
Sbjct:   18 PAFMPTAGILIIGNEILSGKVTDTNSPYLCRELRELGVDVERILTIPDEIDLISAEVRSMSDAYDHVFTSGGIGPTHDDLTMDGVAAAFGLRLEQNASIAGRMERAQG----KAPNESQLKMAMVPEQARLIDAGDLWFPVVVVQNVHVFPGIPELLRKKFESIRDMFRGVPFLLKRVYVKRRESDIAHSLNELLQTHPQLLLGSYPKIGEEAFHVLLTLESRDAGYLQKA---LDDLLSKLPED 255
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A2H5ZH78_9BACT (Competence-damage inducible protein n=1 Tax=bacterium HR30 TaxID=2035425 RepID=A0A2H5ZH78_9BACT)

HSP 1 Score: 156 bits (394), Expect = 3.930e-43
Identity = 96/243 (39.51%), Postives = 147/243 (60.49%), Query Frame = 1 
Query:   13 QVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETV-VSLEAQERGELVRAEAALSELVARVNPDV 738
            Q T A++V+G+E+LSG+V D NS +LA +LR  G  L  I  IPDDVD+IA  V + +   R+V T+GG+GPTHDDVT  GVA+A G    VR     +L+      +   +D++ +KLA +P  A L+     A+PV +  NVFILPG+P L R +F   R+ FR A  +     +   ET +V  LN+ + A P + +GSYP+ ++    V V+LE++++  +   E AL+ L+A++ P++
Sbjct:    3 QATAALIVIGNEILSGKVVDTNSSYLAKELRALGVALERILVIPDDVDVIAEAVLDYSQRFRWVFTSGGVGPTHDDVTIAGVAQALG----VRVVRHPVLEEQIHKFSSGEVDEARLKLAEVPEGAELIYGDELAFPVLQARNVFILPGIPELFRAKFQALRSRFRSAPFHLRVVYLRAAETALVPYLNATLRAFPGLLLGSYPKWNDPEYHVKVTLESKDQSYV---EQALAHLLAQIPPEM 238
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A7Y3GUK0_9DELT (Competence/damage-inducible protein A n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GUK0_9DELT)

HSP 1 Score: 153 bits (387), Expect = 4.130e-42
Identity = 91/242 (37.60%), Postives = 150/242 (61.98%), Query Frame = 1 
Query:   28 IVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQ-ESESPETVVSLEAQERGELVRAEAALSELVARVNPDVRPHR 750
            I+++G+E+LSG+V D NS +L  +LR+ G  +  I TI D++D+I   VR  +S+  FV T+GG+GPTHDD+T +GVAKAFG  L+  + +++ ++   G       ++S VK+AM+P+ A L+      +PV  V NV+I PG+P+L+  +FD  R  FRG         I   E+DI   L+ ++ + P + +GSYP+   ES + +++LE+++ G L   ++AL +L+ R+ P+   HR
Sbjct:    6 IIIIGNEILSGKVTDTNSPYLCRELRELGVDVDRILTIADEIDLIGDEVRRFSSNYDFVFTSGGVGPTHDDLTMDGVAKAFGRELERNSSIISRIEAAQGKPC----NESQVKMAMIPTGASLLDAGDLWFPVVVVENVYIFPGIPALLMKKFDSIRDRFRGVPFLLKRVFINQRESDIAGHLHEVLESFPKLLLGSYPKIGEESFKVLLTLESRDAGYL---QSALDDLLNRL-PEGAVHR 239
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A7V3XLG8_9BACT (Competence/damage-inducible protein A n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XLG8_9BACT)

HSP 1 Score: 153 bits (387), Expect = 4.240e-42
Identity = 91/240 (37.92%), Postives = 145/240 (60.42%), Query Frame = 1 
Query:   19 TVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETV-VSLEAQERGELVRAEAALSELVARVNPD 735
            T  IV++G+E+LSG+V+D N+ +L  +LR+ G  +  IC +PD+VD IAA +   +  +    T+GG+GPTHDDVT EG A+A G  +    E+VALL+   G     AL+++ +K+A +P+ A L+   +  +PV  V NV+ILPG+P + R +F+  R  FR    +  +  + + E  + A LN L++  P++ +GSYP+ S     V V+LE+++R  L   E AL   +AR+  D
Sbjct:    4 TAGIVLIGNEILSGKVQDANASYLCRELRQLGVDVRRICVVPDEVDAIAAEIAASSRDHEVAFTSGGVGPTHDDVTIEGAARAMGVEVVRHPELVALLRAHYGD----ALNEAHLKMAEVPAGAELIAAGSLRFPVILVRNVYILPGVPEIFRRKFEAIRERFRDRPFHLRSVFVSIGEGTLAAYLNDLLAEFPALMLGSYPEFSNPEYRVKVTLESKDRPYL---EEALGRFLARLPAD 236
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A7C2NEC8_9DELT (Competence/damage-inducible protein A n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2NEC8_9DELT)

HSP 1 Score: 151 bits (381), Expect = 3.250e-41
Identity = 95/240 (39.58%), Postives = 140/240 (58.33%), Query Frame = 1 
Query:   19 TVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESP-ETVVSLEAQERGELVRAEAALSELVARVNPD 735
            T  I+V+G+E+LSG+V D NS +L  +LR  G  +  I  IPDDVD IA  VR +A    F  T+GG+GPTHDD+T +GVAKAFG  L++ A +V  + R  G S     ++SL+K+A +P+ A L+      +PV  V NV++ PG+P L   +F   R  FRG         +   E++I  ALN L+   P++ +GSYP+  E     +++LE+++   L RA   L  L+ R+ PD
Sbjct:    3 TAGILVIGNEILSGKVTDTNSPFLCRELRALGVDVQRILVIPDDVDAIARDVRAMADGYDFAFTSGGVGPTHDDLTMDGVAKAFGRPLELDASIVDRIARAQGRSP----NESLLKMARIPAGASLLDAGDLWFPVVVVENVYVFPGVPELFVKKFHAIRERFRGVPFLLRNVYVRRRESEIAEALNDLLREFPALLLGSYPKIGEEGFHVLLTLESRDPAYLGRA---LDGLLKRLPPD 235
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A7C2INC2_9BACT (Competence/damage-inducible protein A n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2INC2_9BACT)

HSP 1 Score: 150 bits (379), Expect = 6.820e-41
Identity = 89/236 (37.71%), Postives = 138/236 (58.47%), Query Frame = 1 
Query:   13 QVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETV-VSLEAQERGELVRAEAALSELV 717
            Q T AIVV+G+E+L+G+ ED N+ +L  +L + G  L  I  IPDD+D IA  VRE A+   +V T+GG+GPTHDD+T EG+A+AFG  +    E+ A+++   G  A    D++ +++A  P  + L+      +PV    NV+ILPG+P L R +F+  R  FR    + +A      E DI   LN +   HP V +GSYP  +     V +++E+++  ++ RA  AL +L+
Sbjct:    3 QKTAAIVVIGNEILTGKSEDKNASFLIGELHRLGVSLLRIEVIPDDLDEIARAVRECAARFDYVFTSGGVGPTHDDLTIEGIARAFGREVVRDPELAAMIRGYFGDGA----DETRLRMADTPEGSRLIRENGLRWPVLATENVYILPGVPELFRSKFEAIRELFRAEPFFTAAIYTREDEFDIAPRLNDVAGNHPGVEIGSYPNFTTDEYRVKITIESKQSDQVARALRALLDLL 234
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A7C3EJZ0_9DELT (Competence/damage-inducible protein A n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3EJZ0_9DELT)

HSP 1 Score: 150 bits (379), Expect = 7.210e-41
Identity = 91/234 (38.89%), Postives = 140/234 (59.83%), Query Frame = 1 
Query:   19 TVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETV-VSLEAQERGELVRAEAALSELV 717
            T A++V+G+E+LSG++ D NS +LA +LR  G  L  I  +PD ++ IA  V + +    FV T+GG+GPTHDDVT  GVA+  G  + VR  ++    R  G+ +    D++ +K+A +P  A LV     A+PV +V N+FILPG+P L R +F   R  F  A  +  A  + +PET +V  LN+ + A PS+ +GSYP+ ++    V V+LE+++   L RA A L + +
Sbjct:    7 TAAVIVIGNEILSGKIADTNSNFLARELRALGVSLERILVVPDRIETIAEAVADFSRKFDFVFTSGGVGPTHDDVTIAGVARGLGVPV-VRHPILERQIRQYGAGSA---DEARLKMADVPEGAELVFGEELAFPVLKVRNIFILPGVPELFRAKFQALRQRFASAPFFLRAVYVRVPETAMVPYLNATLEAFPSLLLGSYPKWNDPEYQVRVTLESKDASYLERAFAHLLDQI 236
[Close]
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Match: A0A2E5YHP5_9DELT (Competence/damage-inducible protein A n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YHP5_9DELT)

HSP 1 Score: 151 bits (381), Expect = 7.890e-41
Identity = 87/226 (38.50%), Postives = 138/226 (61.06%), Query Frame = 1 
Query:   19 TVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDDVDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEVVALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFILPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHPSVAVGSYPQESESPETVV-SLEAQERGELVRA 693
            T A++V+G+E+LSG+V D NS +LA++LRK G  L  I TIPD++D+IA   R L+ +  FV T+GGIGPTHDD+T +G+A+AFG  +++   +V  + R +     + L+ ++ K+AM+P+ A ++      +PV  V NV ILPG+P L   +F   +  F G         +   E+DI   LN+L+   P + +GSYP+ +E    V+ +LE++  G + RA
Sbjct:   36 TAALLVIGNEILSGKVRDTNSAFLAVELRKLGVDLERILTIPDEIDLIADETRALSHAYDFVFTSGGIGPTHDDMTMDGIAQAFGREIELHQSMVDRMARYS----DKPLNDAMKKMAMIPAGADVLDVGGLWFPVVVVENVHILPGIPELFEKKFQSIQDRFSGVPFILRKLYVRESESDIADILNALLREFPELMLGSYPRMNEEHYRVMLTLESRNEGYVERA 257
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176890 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9E0_9STRA2.910e-179100.00MoaB/Mog domain-containing protein n=1 Tax=Tribone... [more]
A0A3A0FRE8_9PROT6.730e-4740.42Competence/damage-inducible protein A n=1 Tax=Prot... [more]
A0A2D6BQP8_9DELT7.400e-4537.55MoCF_biosynth domain-containing protein n=1 Tax=De... [more]
A0A2H5ZH78_9BACT3.930e-4339.51Competence-damage inducible protein n=1 Tax=bacter... [more]
A0A7Y3GUK0_9DELT4.130e-4237.60Competence/damage-inducible protein A n=1 Tax=Myxo... [more]
A0A7V3XLG8_9BACT4.240e-4237.92Competence/damage-inducible protein A n=1 Tax=Cand... [more]
A0A7C2NEC8_9DELT3.250e-4139.58Competence/damage-inducible protein A n=1 Tax=Delt... [more]
A0A7C2INC2_9BACT6.820e-4137.71Competence/damage-inducible protein A n=1 Tax=Blas... [more]
A0A7C3EJZ0_9DELT7.210e-4138.89Competence/damage-inducible protein A n=1 Tax=Delt... [more]
A0A2E5YHP5_9DELT7.890e-4138.50Competence/damage-inducible protein A n=1 Tax=Delt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:302794..304208 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176890|e_gw1.143.12.1
Preferred namecinA1
DescriptionProbable molybdopterin binding domain
COG categoryS
Max annot lvl28211|Alphaproteobacteria
EggNOG OGsCOG1058@1|root,COG1058@2|Bacteria,1MVG6@1224|Proteobacteria,2TU5C@28211|Alphaproteobacteria,3JR92@41294|Bradyrhizobiaceae
Evalue1.24e-37
Seed ortholog1037409.BJ6T_41290
Hectar predicted targeting categoryother localisation
TranscriptId177212
TrackFilteredModels1
ProteinId176890
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176890gene_14343Tribonema minus UTEX_B_3156 geneContig_143 302794..304208 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176890Trimin1|176890|e_gw1.143.12.1Tribonema minus UTEX_B_3156 polypeptideContig_143 302794..304208 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14343_2exon_14343_2Tribonema minus UTEX_B_3156 exonContig_143 302794..303386 -
exon_14343_1exon_14343_1Tribonema minus UTEX_B_3156 exonContig_143 303986..304208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14343CDS_14343Tribonema minus UTEX_B_3156 CDSContig_143 303986..304208 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14343 ID=mRNA_14343|Name=jgi.p|Trimin1|176890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=816bp|location=Sequence derived from alignment at Contig_143:302794..304208- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGGCGAACAAGTTACAGTCGCCATTGTGGTGGTGGGGTCTGAGGT
GCTGTCTGGGAGAGTTGAGGATGTCAACTCTCGCTGGTTGGCGATACAGC
TGAGGAAGTGCGGGGCGGTGCTCACAGAGATTTGCACCATACCAGATGAC
GTCGACATCATAGCAGCCAGGGTGAGGGAGCTAGCGTCCAGCAATAGGTT
TGTCATCACGGCGGGAGGCATAGGCCCCACGCACGACGACGTCACCTACG
AGGGCGTGGCCAAGGCCTTTGGCTGCGGCCTCCAGGTGCGCGCCGAAGTG
GTCGCGCTGCTCAAGCGACTCACGGGCTCCAGCGCGCAGCGCGCCCTCGA
CAAGTCTCTCGTCAAGCTGGCCATGCTGCCGAGCAAGGCGGTCCTGGTGA
CCAACGCCGCAGATGCGTACCCCGTCGCGCGCGTGGCCAACGTCTTCATC
CTCCCCGGCATGCCCTCGCTCATGCGCGGCCAGTTCGACCAGTTCCGCGC
CGCCTTCCGCGGCGCGCTGCGCTACCACTCCGCCTTCCGCATCGGCCTGC
CGGAGACGGACATTGTGGCAGCGCTCAACTCCCTCGTCTCCGCGCACCCG
TCCGTGGCCGTGGGCTCGTACCCCCAGGAAAGCGAGTCGCCCGAAACGGT
TGTCAGCTTGGAGGCGCAGGAGCGCGGCGAGCTGGTGCGCGCGGAGGCAG
CGCTCAGCGAGCTGGTGGCGCGCGTCAACCCGGACGTGCGGCCGCACCGC
TGCATCAAGGCGTCGGCGGCGAAGGCAAAGGCAAAGGCGACGGCGGCGAC
GCAGAGCAAGCTGTGA
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protein sequence of jgi.p|Trimin1|176890

>Trimin1|176890|e_gw1.143.12.1 ID=Trimin1|176890|e_gw1.143.12.1|Name=jgi.p|Trimin1|176890|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=272bp
MPGEQVTVAIVVVGSEVLSGRVEDVNSRWLAIQLRKCGAVLTEICTIPDD
VDIIAARVRELASSNRFVITAGGIGPTHDDVTYEGVAKAFGCGLQVRAEV
VALLKRLTGSSAQRALDKSLVKLAMLPSKAVLVTNAADAYPVARVANVFI
LPGMPSLMRGQFDQFRAAFRGALRYHSAFRIGLPETDIVAALNSLVSAHP
SVAVGSYPQESESPETVVSLEAQERGELVRAEAALSELVARVNPDVRPHR
CIKASAAKAKAKATAATQSKL*
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mRNA from alignment at Contig_143:302794..304208-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14343 ID=mRNA_14343|Name=jgi.p|Trimin1|176890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1415bp|location=Sequence derived from alignment at Contig_143:302794..304208- (Tribonema minus UTEX_B_3156 )
ATGCCAGGCGAACAAGTTACAGTCGCCATTGTGGTGGTGGGGTCTGAGGT
GCTGTCTGGGAGAGTTGAGGATGTCAACTCTCGCTGGTTGGCGATACAGC
TGAGGAAGTGCGGGGCGGTGCTCACAGAGATTTGCACCATACCAGATGAC
GTCGACATCATAGCAGCCAGGGTGAGGGAGCTAGCGTCCAGCAATAGGTT
TGTCATCACGGCGGGAGGCATAGGTACGCACGTCGGTCCACGCAATTGTG
TGCCACCATCCTGGTGTCAATGAGCGACTTCTGCAACACTGCTGTTCAGT
GTTGTGCGATTTTCGTGCCAGTCGTGAGCTTCTCTACCACGCTGAGGTTT
GCATCATTGCGCGCATCCGATCGTGGTCTGTTTTAATGTTGTTGTCTGTT
GTGCAGCGCAGCACCTTCATGGTTTACAACAAGCTGCTTCAAAAGCCAAC
GGTTTTGTTGACAAGTTTTTATGGCTGTCTACACAACATACAAACAATAA
AAAAGCGATCCCTTGCCTCGCATTGGTGGAGCACAAAAGTTTGCCTCTGG
TGGCGTTACACATCAAAGGCTGTTGGCATGAGAGCAATACGTCATGCAGG
CACCGTCATGTGCCTGTGTGCACCCTCACACGTCCTAGGCATCCTGCCAG
CATCACCTGCATCATCCCTTCCTGCACATCAGCAACCTCAGCGAAGCTCA
ACATAATACCAACCTTTGTTTACGTCATGCACATTCCCCATCTACGCATT
AATCACCCCACAAAGCCCTGACACGCACTGTTGCTCATGCTCACGCCGCG
CTTCCGCCCGCGCATGCTGCAGGCCCCACGCACGACGACGTCACCTACGA
GGGCGTGGCCAAGGCCTTTGGCTGCGGCCTCCAGGTGCGCGCCGAAGTGG
TCGCGCTGCTCAAGCGACTCACGGGCTCCAGCGCGCAGCGCGCCCTCGAC
AAGTCTCTCGTCAAGCTGGCCATGCTGCCGAGCAAGGCGGTCCTGGTGAC
CAACGCCGCAGATGCGTACCCCGTCGCGCGCGTGGCCAACGTCTTCATCC
TCCCCGGCATGCCCTCGCTCATGCGCGGCCAGTTCGACCAGTTCCGCGCC
GCCTTCCGCGGCGCGCTGCGCTACCACTCCGCCTTCCGCATCGGCCTGCC
GGAGACGGACATTGTGGCAGCGCTCAACTCCCTCGTCTCCGCGCACCCGT
CCGTGGCCGTGGGCTCGTACCCCCAGGAAAGCGAGTCGCCCGAAACGGTT
GTCAGCTTGGAGGCGCAGGAGCGCGGCGAGCTGGTGCGCGCGGAGGCAGC
GCTCAGCGAGCTGGTGGCGCGCGTCAACCCGGACGTGCGGCCGCACCGCT
GCATCAAGGCGTCGGCGGCGAAGGCAAAGGCAAAGGCGACGGCGGCGACG
CAGAGCAAGCTGTGA
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Coding sequence (CDS) from alignment at Contig_143:302794..304208-

>mRNA_14343 ID=mRNA_14343|Name=jgi.p|Trimin1|176890|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=816bp|location=Sequence derived from alignment at Contig_143:302794..304208- (Tribonema minus UTEX_B_3156 )
ATGCCAGGCGAACAAGTTACAGTCGCCATTGTGGTGGTGGGGTCTGAGGT
GCTGTCTGGGAGAGTTGAGGATGTCAACTCTCGCTGGTTGGCGATACAGC
TGAGGAAGTGCGGGGCGGTGCTCACAGAGATTTGCACCATACCAGATGAC
GTCGACATCATAGCAGCCAGGGTGAGGGAGCTAGCGTCCAGCAATAGGTT
TGTCATCACGGCGGGAGGCATAGGCCCCACGCACGACGACGTCACCTACG
AGGGCGTGGCCAAGGCCTTTGGCTGCGGCCTCCAGGTGCGCGCCGAAGTG
GTCGCGCTGCTCAAGCGACTCACGGGCTCCAGCGCGCAGCGCGCCCTCGA
CAAGTCTCTCGTCAAGCTGGCCATGCTGCCGAGCAAGGCGGTCCTGGTGA
CCAACGCCGCAGATGCGTACCCCGTCGCGCGCGTGGCCAACGTCTTCATC
CTCCCCGGCATGCCCTCGCTCATGCGCGGCCAGTTCGACCAGTTCCGCGC
CGCCTTCCGCGGCGCGCTGCGCTACCACTCCGCCTTCCGCATCGGCCTGC
CGGAGACGGACATTGTGGCAGCGCTCAACTCCCTCGTCTCCGCGCACCCG
TCCGTGGCCGTGGGCTCGTACCCCCAGGAAAGCGAGTCGCCCGAAACGGT
TGTCAGCTTGGAGGCGCAGGAGCGCGGCGAGCTGGTGCGCGCGGAGGCAG
CGCTCAGCGAGCTGGTGGCGCGCGTCAACCCGGACGTGCGGCCGCACCGC
TGCATCAAGGCGTCGGCGGCGAAGGCAAAGGCAAAGGCGACGGCGGCGAC
GCAGAGCAAGCTGTGA
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