mRNA_14337 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CL53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL53_9STRA) HSP 1 Score: 628 bits (1619), Expect = 1.620e-226 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 Query: 1 MASAVDSIDSSSLALNQALEGDELVARDCFAEFTCMGTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSSA 981 MASAVDSIDSSSLALNQALEGDELVARDCFAEFTCMGTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSSA Sbjct: 1 MASAVDSIDSSSLALNQALEGDELVARDCFAEFTCMGTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSSA 327
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CEX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX4_9STRA) HSP 1 Score: 437 bits (1124), Expect = 1.560e-150 Identity = 248/368 (67.39%), Postives = 277/368 (75.27%), Query Frame = 1 Query: 1 MASAVDSIDSSSLALNQALEGDELVARDCFAEFTCM--------------------------------GTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLA---------GTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSSA 981 MASAVDSIDSS+LALNQAL+GDELVARDCFAEFT M GTAGVLGMSYNGDGTDLEQRLE+L+L +GL + +G LRAILTFYQ V+ RRPV VIDIN + PA LS LLLAA+QLGFQEKLATFIFVVSASRSALGLT+GI QSRVRGYRAPDF+ EA YLAKHL PFP + EFVVQQ+GTRAMDLVE+CS RGVE E ECRERVEAYR A I DAR AL GFVAIA++N AFSK+AS+AFF++LLA GT VL D A AFGF++P+LLL ALA++HAFA+DPFDHTISMQSHFMQ A++QYLQ EA AAGTSEP SA Sbjct: 1 MASAVDSIDSSTLALNQALDGDELVARDCFAEFTSMVSLARTDKQNPSLLVYGARGVGKTSLVEAALQGTAGVLGMSYNGDGTDLEQRLEQLLLKLAGLPEHGPKADLGDRLRAILTFYQIVHKRRPVVVIDINERTGPATLSKLLLAAKQLGFQEKLATFIFVVSASRSALGLTIGIRQSRVRGYRAPDFSEDEALAYLAKHLPPFPGMAEFVVQQIGTRAMDLVELCSECRGVELEPECRERVEAYREACIKDARFALRGFVAIAKKNEAFSKEASVAFFRQLLAADSDDAALAGTCVLDDDYAADAFGFEEPELLLLALAKYHAFAIDPFDHTISMQSHFMQTAIEQYLQPEAPSAAGTSEPRSA 368
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CEG5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG5_9STRA) HSP 1 Score: 377 bits (967), Expect = 7.930e-128 Identity = 206/293 (70.31%), Postives = 234/293 (79.86%), Query Frame = 1 Query: 130 MSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLA---------GTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSSA 981 MSYNGDGTDLEQRLE+L+L +GL + +G LRAILTFYQ V+ RRPV VIDIN + PA LS LLLAA+QLGFQEKLATFIFVVSASRSALGLT+GI QSRVRGYRAPDF+ EA YLAKHL PFP + EFVVQQ+GTRA+DLVE+CS RGVE E ECRERVEAYR A I DAR AL GFVAIA++N AFSK+AS+AFF++LLA GT VL D A AFGF++P+LLL ALA++HAFA+DPFDHTISMQSHFMQ A++QYLQ EA AAGTSE SA Sbjct: 1 MSYNGDGTDLEQRLEQLLLKLAGLPEHGPKADLGDRLRAILTFYQIVHKRRPVVVIDINERTGPATLSKLLLAAKQLGFQEKLATFIFVVSASRSALGLTIGIRQSRVRGYRAPDFSEDEALAYLAKHLPPFPGMAEFVVQQIGTRALDLVELCSECRGVELEPECRERVEAYREACIKDARFALRGFVAIAKKNEAFSKEASVAFFRQLLAADSDDAALAGTCVLDDDYAADAFGFEEPELLLLALAKYHAFAIDPFDHTISMQSHFMQTAIEQYLQPEAPSAAGTSERRSA 293
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CIF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF9_9STRA) HSP 1 Score: 369 bits (947), Expect = 3.540e-124 Identity = 199/276 (72.10%), Postives = 222/276 (80.43%), Query Frame = 1 Query: 151 TDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSS 978 T L RLE ++ + L A G LRAI T Y++ RRP+ +IDIN KMEPA LS LL+AA+QLGF+EKLATFIFVVSASRSALGLTV +SRV GY APDF EA YLAKHLSPFP + EFVVQQVGTRAM LV +C +G +SE ECR RVEAYR ARIDDARD LDGF+AIA++NAAFSKDAS+AFFKKLL GT VLKD+DARVAFGF +PDLLLAALA+WHAFAVDPF HTISMQSHFMQIA+DQYLQAEALGAAGTSE SS Sbjct: 39 TALAVRLEHAMMKLAKLPIVAPKADPGDRLRAIFTIYKKARKRRPIVIIDINEKMEPATLSKLLMAAKQLGFEEKLATFIFVVSASRSALGLTVTTEESRVDGYSAPDFTEDEALAYLAKHLSPFPGMAEFVVQQVGTRAMHLVSLCRKCQGAKSETECRGRVEAYREARIDDARDVLDGFLAIAKKNAAFSKDASVAFFKKLLNGTPVLKDRDARVAFGFDEPDLLLAALAKWHAFAVDPFKHTISMQSHFMQIAIDQYLQAEALGAAGTSELSS 314
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A835Z1Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z3_9STRA) HSP 1 Score: 367 bits (941), Expect = 3.050e-121 Identity = 206/289 (71.28%), Postives = 224/289 (77.51%), Query Frame = 1 Query: 112 TAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSS 978 TAGVL MSY GDG DL RLE ++ + L A G LRAI T Y++ RRP+ +IDIN KMEPA LS LL+AA+QLGF EKLATFIFVVSA SALGLTV +SRV GY APDF EA YLAKHLSPFP + EFVVQQVGTRAM LV +C +G +SE E R RVEAYRTARIDDA L GFVAIAEENAAFSK+ASLAFFKKLL GT VLKD+ A VAFGFKKPDLLLAALAQWHAFAV PF+HTISMQSHFM IA+DQYLQAEA AAGTSEPSS Sbjct: 188 TAGVLYMSYQGDGLDLAVRLEHAMMKLAKLPIVAPKADPGDRLRAIFTIYRKARKRRPIVIIDINEKMEPATLSKLLMAAKQLGF-EKLATFIFVVSALWSALGLTVTTEESRVDGYSAPDFTEDEALAYLAKHLSPFPGMAEFVVQQVGTRAMHLVSLCRKCQGAKSETERRGRVEAYRTARIDDAGLVLLGFVAIAEENAAFSKEASLAFFKKLLDGTPVLKDRHAMVAFGFKKPDLLLAALAQWHAFAVVPFEHTISMQSHFMHIAIDQYLQAEASSAAGTSEPSS 475
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A835YHU7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHU7_9STRA) HSP 1 Score: 366 bits (939), Expect = 2.540e-120 Identity = 217/371 (58.49%), Postives = 247/371 (66.58%), Query Frame = 1 Query: 1 MASAVDSIDSSSLALNQALEGDELVARDCFAEFTC--------------------------------MGTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAG--------------TSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPS 975 MASAVDSIDS+ L LNQAL GD+L+ RDCFAEF G AGVL MSYNGDGTDLEQRLE+L+L +GL +G LRAILTFYQ+VY+RRPV VI I+ + PA LS LLLAA QLGFQEKLATFIFVVSA RSALGL +G++Q++V GYRAPDF EA YLAKHL P + EF VQQ+GTRAMDLVE+CS RGVESE ECR RV A R RI DAR AL GFV IA++N AF + A LAFF+KLLA VL D A VAFGF+KP LLL+ALA++HAF VDPF HTISMQSH M+IA+ +YLQA A AA PS Sbjct: 61 MASAVDSIDST-LPLNQALAGDKLLQRDCFAEFKATVNLTRADDQNPSLLVYGARGGGKTSIVEAALQGIAGVLAMSYNGDGTDLEQRLEQLLLKPAGLPGHGPKADLGDRLRAILTFYQKVYDRRPVVVIHIDERTAPATLSKLLLAAEQLGFQEKLATFIFVVSAYRSALGLPIGLSQTQVLGYRAPDFTEDEALAYLAKHLPSCPGMAEFAVQQIGTRAMDLVELCSACRGVESETECRARVAALRAMRIGDARFALRGFVGIAKKNKAFEEKAGLAFFEKLLAAHGGDAALARACVLDDDVLTDYHAAVAFGFEKPALLLSALAEYHAFVVDPFYHTISMQSHCMRIAIQEYLQAVASSAASAHAPS 430
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CJC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC5_9STRA) HSP 1 Score: 333 bits (854), Expect = 1.310e-110 Identity = 184/289 (63.67%), Postives = 214/289 (74.05%), Query Frame = 1 Query: 112 TAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDAATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQAEALGAAGTSEPSS 978 T+GVL + Y G+G +LE RLE +L + L T R G RAIL Y++V+ RP+ VIDIN M PA LS LLL A+QLGF+E LAT IFVV+A SALGL V + +SRVRGYRAPDF EA Y AKHLS FP++TEFVV+Q+GTRAM LV +C +G ESE ECR R+ AYRTARIDDA L GFVAIA+EN +SKDASLAFFKKL GT VL D DA AFGF PDLL AALA+W AF VDPFDHTISMQSHFM+ A+D+ LQAEA+GAAGT+ PSS Sbjct: 9 TSGVLPVLYEGNGLNLEVRLELAMLALAELPIINPTVRPGSRCRAILAIYKKVHKCRPIVVIDINEAMAPATLSKLLLEAKQLGFEEYLATLIFVVTAPWSALGLPVSLEESRVRGYRAPDFTEDEALTYAAKHLSAFPDMTEFVVKQIGTRAMHLVSLCRKCQGAESETECRRRLAAYRTARIDDAALVLLGFVAIAQENETYSKDASLAFFKKLKDGTPVLDDGDAWDAFGFDDPDLLFAALAKWPAFPVDPFDHTISMQSHFMKTAIDEDLQAEAVGAAGTNAPSS 297
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A835Z0B3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0B3_9STRA) HSP 1 Score: 268 bits (684), Expect = 7.040e-86 Identity = 145/203 (71.43%), Postives = 163/203 (80.30%), Query Frame = 1 Query: 238 LRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALA 846 LRAI T Y++ RRP+ +IDIN KMEPA LS LL+AA+QLGF+EKLATFIFVVSASRSAL LTV +SRV GY AP F EA YLAKHLSPFP + EFVVQQVGTRAM LV +C +G +SE ECR R EAYRTARIDDA L GFVA+A++NAAFSK+ASLAFFKKLL GT VLKD+DA VAFGF +PDLLLAALA Sbjct: 19 LRAIFTIYKKARKRRPIVIIDINEKMEPATLSKLLMAAKQLGFEEKLATFIFVVSASRSALRLTVTTEESRVDGYSAPGFTEDEALAYLAKHLSPFPGMAEFVVQQVGTRAMHLVSLCRKCQGAKSETECRGRAEAYRTARIDDAGLVLLGFVAMAKKNAAFSKEASLAFFKKLLDGTPVLKDRDAMVAFGFDEPDLLLAALA 221
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CPB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPB3_9STRA) HSP 1 Score: 232 bits (591), Expect = 8.440e-70 Identity = 133/278 (47.84%), Postives = 171/278 (61.51%), Query Frame = 1 Query: 109 GTAGVLGMSYNGDGTDLEQRLEELVLDCSGLSDDA--ATGRIGYCLRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDARDALDGFVAIAEENAAFSKDASLAFFKKLLAGTSVLKDKDARVAFGFKKPDLLLAALAQWHAFAVDPFDHTISMQSHFMQIAVDQYLQ 936 G GV+ Y TD++ L++++ + A A RA L Y Y RR V VI+INS++ P L ++LLAA+QLGF E LATF+ VVSASRSALG+ +G+++ RVR Y APDF AEAH Y+ + L FP + + VG AM LVEV R +S EC E AYR + DA+D L F+AIA++N FSKD S F ++L AG L +DA VAFGF + D LLAALA+WHAF +DPF +SMQSHFM IA+ QYLQ Sbjct: 90 GMRGVITAYYTEGITDIQGWLDQVLTRVTSKRTTAQPAGTMTADRARAALATYLVKYRRRAVIVIEINSEVTPHTLCEILLAAKQLGFDEMLATFVIVVSASRSALGVPIGLSELRVRRYSAPDFTEAEAHQYIQQRLPKFPGIAANITSLVGEHAMHLVEVSEACREAKSAEECVEHAHAYREVGVRDAQDTLRNFIAIAKKNGTFSKDDSRLFLEQLRAGKPALFKEDACVAFGFTELDTLLAALAKWHAFVIDPFKKQVSMQSHFMWIAMGQYLQ 367
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A835Z4Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Z8_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.640e-58 Identity = 104/146 (71.23%), Postives = 116/146 (79.45%), Query Frame = 1 Query: 238 LRAILTFYQRVYNRRPVFVIDINSKMEPAALSDLLLAARQLGFQEKLATFIFVVSASRSALGLTVGITQSRVRGYRAPDFNPAEAHNYLAKHLSPFPELTEFVVQQVGTRAMDLVEVCSGSRGVESELECRERVEAYRTARIDDAR 675 LRAI T Y++ RRP+ +IDIN KMEPA LS LL+AA+QLGF+EKLATFIFVVSASRSALGLTV +SRV GY APDF EA YLAKHLSPFP + EFVVQQVGTRAM LV +C +GV+SE ECR RVEAYR ARI DAR Sbjct: 19 LRAIFTIYKKARKRRPIVIIDINEKMEPATLSKLLMAAKQLGFEEKLATFIFVVSASRSALGLTVTTEESRVDGYSAPDFTEDEALAYLAKHLSPFPGMAEFVVQQVGTRAMHLVSLCRKCQGVKSETECRGRVEAYRAARIKDAR 164
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A836CLZ7_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLZ7_9STRA) HSP 1 Score: 378 bits (971), Expect = 2.080e-129 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1 Query: 1 MEWRLAEAGCSWKRTKTDGHSSRRQWWRRHITMSEDTSVFGTVGAFMGTWWFAILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAAAQGGAEGSAAGEPGPEPQRRCRPAMLQLAALSAGARLRAQLPLRWTQSDDEVEIFLSVPKELGRSDIGFTLTGTSRITVTIKKEVVLSGELYKSVDREGCNWQIEDEGERRVVWIQLTKSEPSTRPGYWRALLKQTDAS 825 MEWRLAEAGCSWKRTKTDGHSSRRQWWRRHITMSEDTSVFGTVGAFMGTWWFAILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAAAQGGAEGSAAGEPGPEPQRRCRPAMLQLAALSAGARLRAQLPLRWTQSDDEVEIFLSVPKELGRSDIGFTLTGTSRITVTIKKEVVLSGELYKSVDREGCNWQIEDEGERRVVWIQLTKSEPSTRPGYWRALLKQTDAS Sbjct: 1 MEWRLAEAGCSWKRTKTDGHSSRRQWWRRHITMSEDTSVFGTVGAFMGTWWFAILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAAAQGGAEGSAAGEPGPEPQRRCRPAMLQLAALSAGARLRAQLPLRWTQSDDEVEIFLSVPKELGRSDIGFTLTGTSRITVTIKKEVVLSGELYKSVDREGCNWQIEDEGERRVVWIQLTKSEPSTRPGYWRALLKQTDAS 275
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Match: A0A7S2XD20_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XD20_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 1.100e-6 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 541 WTQSDDEVEIFLSVPKELGRSDIGFTLTGTSRITVTIKKEVVLSGELYKSVDREGCNWQIEDEGERRVVWIQLTKSEPSTRPGYWRALLK 810 W Q DDE+EI + V + D+ TS ITV +K E VL G L+ + +G W + +G++R + I+L K++ T W ALL+ Sbjct: 221 WKQGDDEIEITIKVSPDCKSKDVKVKFQ-TSSITVEVKGESVLKGNLFGIIHTDGSTWSLSGDGKQRTLSIELEKAKEIT----WTALLQ 305 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353084 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
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BLAST of jgi.p|Trimin1|353084 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14337 ID=mRNA_14337|Name=jgi.p|Trimin1|353084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1053bp|location=Sequence derived from alignment at Contig_143:272395..274072- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGAGTGCGGTGGATAGCATTGACAGCAGCAGTCTCGCACTGAACCAback to top protein sequence of jgi.p|Trimin1|353084 >Trimin1|353084|estExt_Genemark1.C_Ctg_1430029 ID=Trimin1|353084|estExt_Genemark1.C_Ctg_1430029|Name=jgi.p|Trimin1|353084|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=328bp MASAVDSIDSSSLALNQALEGDELVARDCFAEFTCMGTAGVLGMSYNGDGback to top mRNA from alignment at Contig_143:272395..274072- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14337 ID=mRNA_14337|Name=jgi.p|Trimin1|353084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1678bp|location=Sequence derived from alignment at Contig_143:272395..274072- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_143:272395..274072- >mRNA_14337 ID=mRNA_14337|Name=jgi.p|Trimin1|353084|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=984bp|location=Sequence derived from alignment at Contig_143:272395..274072- (Tribonema minus UTEX_B_3156 )back to top |