mRNA_14276 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353693
Unique NamemRNA_14276
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A835ZC82_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC82_9STRA)

HSP 1 Score: 625 bits (1613), Expect = 4.920e-223
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQEGGSTAAASA 927
            MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQEGGSTAAASA
Sbjct:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQEGGSTAAASA 309          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A6H5KCS3_9PHAE (Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCS3_9PHAE)

HSP 1 Score: 486 bits (1250), Expect = 1.300e-166
Identity = 238/311 (76.53%), Postives = 264/311 (84.89%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPS--LYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQEGGSTAAASA 927
            MP QRP WFRVP+PG   +K+ +LK SL EL LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAV TS  PP+PDPFEPFHTA+A+SRWGINYVVLTSVDRDDL DGGA HFA TVELIK A   MLVECLVSDFRGD AAV RLATSGLDVYAHN+ETV RLQ +VRD+RAGY QSL VLR AK A  +  +YTKTSLMLGLGETE E+L+TMRD+REAGVDVLTLGQYLRPTDHHLAVV+YV P KFD Y  QG+A+GF YVASGP+VRSSYKAGEF++E+M+R GR  ++    + A ASA
Sbjct:   74 MPEQRPGWFRVPAPGGKHSKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQKPPEPDPFEPFHTAEAISRWGINYVVLTSVDRDDLEDGGANHFATTVELIKTAKSDMLVECLVSDFRGDYAAVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLRRAKIAGEATGVYTKTSLMLGLGETEEEILETMRDLREAGVDVLTLGQYLRPTDHHLAVVDYVTPEKFDQYARQGDALGFSYVASGPMVRSSYKAGEFFMENMIRRGRQGEDAVAAAMAVASA 384          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: W7T3L4_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3L4_9STRA)

HSP 1 Score: 466 bits (1198), Expect = 6.040e-159
Identity = 229/302 (75.83%), Postives = 255/302 (84.44%), Query Frame = 1
Query:   10 QRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQEGGSTA 915
            +RP WF VP+PG   T+F +L++SL EL LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAV TS  PP  DPFEP  TA+AV+RWGINYVVLTSVDRDD+PDGGA HFA TVE IK   P MLVECLVSDFRGD AAV RLATSGLDVYAHNVETVERLQ +VRD+RA Y QSL VL  AKAA+P++YTKTSLMLGLGE E EVL+ MRD+R   VDVLTLGQYLRPTDHHLAVVEYV P KFD++R+QGE MGFKYVASGPLVRSSYKAGEF+LE+ ++  +A +  E G+ A
Sbjct:   75 RRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPPADPFEPLKTAEAVARWGINYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFRGDLAAVERLATSGLDVYAHNVETVERLQKYVRDKRASYTQSLQVLAHAKAAQPTVYTKTSLMLGLGEEEGEVLEAMRDMRAHNVDVLTLGQYLRPTDHHLAVVEYVTPEKFDFFRKQGEEMGFKYVASGPLVRSSYKAGEFFLENELKRVKAKRAAEQGAMA 376          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A7S3RYP2_9SPIT (Lipoyl synthase, mitochondrial n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RYP2_9SPIT)

HSP 1 Score: 451 bits (1161), Expect = 2.030e-154
Identity = 224/302 (74.17%), Postives = 251/302 (83.11%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAK----AARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQE 894
            MPA RP WFRVP+PG D T+FN+L+ SLS+LKL+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNT +TPP PDP EPF+TA AV +WGI+YVVLTSVDRDDLPDGGAGHFA TV  +K+  PG+LVECLVSDF GD  A+  LA SGLDVYAHNVETV RLQ++VRDRRAGY QSL  L AAK    A    LYTKTSLMLGLGET+ EVL  MRD+R A VDVLTLGQYLRPTDHHLAVVEYV P  FD  R  GE MGF+YVASGP+VRSSYKAGEF++++M+++   A E
Sbjct:    1 MPASRPDWFRVPAPGGDHTRFNELQSSLSQLKLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTDSTPPPPDPDEPFNTAAAVVQWGIDYVVLTSVDRDDLPDGGAGHFAKTVRTLKDLKPGILVECLVSDFAGDQEAIRTLALSGLDVYAHNVETVRRLQSYVRDRRAGYDQSLQGLAAAKKMAAAEGRRLYTKTSLMLGLGETKEEVLAAMRDMRAADVDVLTLGQYLRPTDHHLAVVEYVTPEVFDELRVAGEEMGFRYVASGPMVRSSYKAGEFFMQNMIKADGGAVE 302          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: B8BQ31_THAPS (Lipoyl synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ31_THAPS)

HSP 1 Score: 449 bits (1155), Expect = 1.900e-153
Identity = 213/295 (72.20%), Postives = 250/295 (84.75%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDK-TKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGR 882
            MP  RP+WF VP+P   + +++  +K+SLS L L+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAV T   PP+PDPFEPF TA+AV++WG++Y+VLTSVDRDD+PDGGA HFA TVEL+K+A P +LVECLVSDF+GD+ +VA LATSGLDVYAHNVETVERLQ +VRD RAGY QS+  LR AK A+P LYTKTSLMLGLGET+ EV+QTM+D+R   VDV+T GQYLRPT++HL+VVEYV P KFD +RE GE +GFKYVASGPLVRSSYKAGEFYL HM+   R
Sbjct:   10 MPKGRPSWFHVPAPSSSEASRYQQVKESLSTLSLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVKTDQKPPEPDPFEPFKTAEAVTKWGVDYIVLTSVDRDDIPDGGAQHFATTVELLKQANPSLLVECLVSDFQGDSKSVATLATSGLDVYAHNVETVERLQKYVRDARAGYWQSINTLRDAKRAQPDLYTKTSLMLGLGETDDEVIQTMKDLRSVDVDVVTFGQYLRPTENHLSVVEYVTPEKFDHFREIGEELGFKYVASGPLVRSSYKAGEFYLTHMINKER 304          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A7S2UUF0_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF0_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 2.890e-153
Identity = 222/295 (75.25%), Postives = 246/295 (83.39%), Query Frame = 1
Query:   10 QRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPS----LYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGR 882
            QRP WFRVP+PGYD T FN L+QSL +LKL+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAV+TS TP    P EPFHTA+AV++WGI YVVLTSVDRDDLPDGGAGHFA TVE +K   PG+LVECLVSDF GD ++V  LA SGLDVYAHNVETV RLQ  VRD+RA Y QSL VL+ AK         LYTKTSLMLGLGETE EV+Q MRD+R A VDV+T GQYLRPT+HHLAVVEYV P KFD YR  GE MGFKYVASGP+VRSSYKAGEF++EHM+++GR
Sbjct:   86 QRPNWFRVPAPGYDHTHFNKLQQSLKDLKLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVSTSPTPXXXXPQEPFHTAEAVAQWGITYVVLTSVDRDDLPDGGAGHFAQTVEFLKLRQPGILVECLVSDFAGDLSSVETLALSGLDVYAHNVETVRRLQGFVRDKRAEYDQSLKVLKHAKQVAQKDGRDLYTKTSLMLGLGETEEEVIQCMRDLRAADVDVVTFGQYLRPTEHHLAVVEYVHPDKFDNYRRIGEEMGFKYVASGPMVRSSYKAGEFFMEHMIKTGR 380          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A7S4VVM7_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VVM7_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 5.790e-153
Identity = 212/301 (70.43%), Postives = 254/301 (84.39%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGY-DKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQE 900
            MP  RP+WFRVP+P   +K++++++K SL++L LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAVNT + PP PDPFEPF TA+AV++WG++Y+VLTSVDRDD+PDGGA HF  TVEL+K   P +LVECLVSDF+GD  +V  LA SGLDVYAHNVETV RLQ  VRD RAGY QSL  L+ AK A+P LYTKTS+MLGLGET+ EV+QTM+D+RE  VDV+T GQYLRPT++HL+VVEYV P KFD +R+ GE MGFKYVASGP+VRSSYKAGEFYL+HM+   RA +E++
Sbjct:   96 MPKGRPSWFRVPAPSQQEKSRYSEVKSSLADLNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVNTDSKPPPPDPFEPFKTAEAVTQWGVDYIVLTSVDRDDIPDGGASHFGTTVELLKAKKPSLLVECLVSDFQGDLNSVETLACSGLDVYAHNVETVRRLQKFVRDPRAGYDQSLSTLKHAKEAKPGLYTKTSIMLGLGETDEEVIQTMKDLREIDVDVVTFGQYLRPTENHLSVVEYVTPEKFDHFRKVGEEMGFKYVASGPMVRSSYKAGEFYLKHMISKERAEKEKQ 396          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A0G4EX03_VITBC (Lipoyl synthase, mitochondrial n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX03_VITBC)

HSP 1 Score: 448 bits (1153), Expect = 1.890e-152
Identity = 214/294 (72.79%), Postives = 246/294 (83.67%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGR 882
            MPAQRP WFRVP+PG   T+F +LK SL +LKLHTVCEEAQCPNIGECWNGGT TIMLLGDTCTRGC+FCAVNTS  PP PDP EP +TA A+S+WG++Y+VLTSVDRDD+ DGGA HFA TVE +K A+P +LVECLVSDF+GD  AV RLATSGLDVYAHNVETVERLQ  VRD+RA Y QSL VLR AK A P +YTKTSLMLGLGETE EV+QTM+D+R+   DV+T GQYLRPTDHHL+VVEY+ P KF  Y   GE MGF+YVASGPLVRSSYKAGE+++ +M+ + R
Sbjct:   54 MPAQRPDWFRVPAPGGIYTRFEELKDSLRDLKLHTVCEEAQCPNIGECWNGGTATIMLLGDTCTRGCRFCAVNTSPEPPAPDPDEPLNTATAISQWGVDYIVLTSVDRDDMADGGADHFARTVEFLKAASPHILVECLVSDFQGDKEAVERLATSGLDVYAHNVETVERLQRFVRDKRANYKQSLDVLRQAKEAEPRVYTKTSLMLGLGETEDEVIQTMKDLRDIDCDVITFGQYLRPTDHHLSVVEYITPDKFAKYGRLGEEMGFRYVASGPLVRSSYKAGEYFMTNMINTDR 347          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A1Z5JJT1_FISSO (Lipoyl synthase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJT1_FISSO)

HSP 1 Score: 448 bits (1153), Expect = 5.790e-152
Identity = 214/297 (72.05%), Postives = 250/297 (84.18%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGYDK-TKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAA 888
            MP  RP+WF+VP+P   K ++++++K+SL  L LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAVNT A PP PDPFEPF TA AV++WG++Y+VLTSVDRDD+PDGGA HFA TVEL+K+  P +LVECLVSDF+G  ++V  LA SGLDVYAHNVETVERLQ  VRD RAGYAQSL  L  AK  +PSLYTKTS+MLGLGET+ EV+QTM+D+R   VDV+T GQYLRPT+ HLAVVEYV P KFD +R+ GE MGFKYVASGPLVRSSYKAGEF++EHM++S R A
Sbjct:   89 MPKGRPSWFKVPAPSQAKDSRYSEVKESLRNLDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVNTDAKPPPPDPFEPFKTADAVTKWGVDYIVLTSVDRDDIPDGGAQHFAHTVELLKQKKPELLVECLVSDFQGMLSSVETLALSGLDVYAHNVETVERLQRFVRDHRAGYAQSLSTLEHAKKVKPSLYTKTSIMLGLGETDEEVIQTMKDLRAFDVDVVTFGQYLRPTEQHLAVVEYVRPEKFDMFRQLGEEMGFKYVASGPLVRSSYKAGEFFMEHMIKSERKA 385          
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Match: A0A448Z673_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z673_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 1.770e-150
Identity = 213/301 (70.76%), Postives = 251/301 (83.39%), Query Frame = 1
Query:    1 MPAQRPAWFRVPSPGY-DKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQE 900
            MP  RP+WFRVP+P   +++++ ++K SL +L L+TVCEEAQCPN+GECW+GGTGTIMLLGDTCTRGC FCAV T   PP PDPFEPF TA AV++WG++Y+VLTSVDRDD+ DGGA HFA TVEL+K   P +LVECLVSDF+G+  +V  LA SGLDVYAHNVETVERLQ  VRD RAGY QSL  L  AK A+P LYTKTS+MLGLGET+ EVLQTM+D+RE  VDV+T GQYLRPT++HLAVVEYV P  FD+YRE GE MGFKYVASGPLVRSSYKAGEFYLEHM+++ R+AQ+ E
Sbjct:  137 MPQGRPSWFRVPAPSLLEESRYTEVKSSLEDLSLNTVCEEAQCPNVGECWSGGTGTIMLLGDTCTRGCMFCAVKTDTKPPPPDPFEPFKTADAVAKWGVDYIVLTSVDRDDIDDGGAQHFAHTVELLKYKKPELLVECLVSDFQGNLTSVETLAVSGLDVYAHNVETVERLQKFVRDPRAGYQQSLSTLEHAKKAKPGLYTKTSIMLGLGETKEEVLQTMKDLREIDVDVVTFGQYLRPTENHLAVVEYVKPEVFDYYREVGEEMGFKYVASGPLVRSSYKAGEFYLEHMIKTERSAQQNE 437          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353693 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZC82_9STRA4.920e-223100.00Lipoyl synthase, mitochondrial n=1 Tax=Tribonema m... [more]
A0A6H5KCS3_9PHAE1.300e-16676.53Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus ... [more]
W7T3L4_9STRA6.040e-15975.83Lipoyl synthase, mitochondrial n=2 Tax=Monodopsida... [more]
A0A7S3RYP2_9SPIT2.030e-15474.17Lipoyl synthase, mitochondrial n=1 Tax=Strombidino... [more]
B8BQ31_THAPS1.900e-15372.20Lipoyl synthase (Fragment) n=1 Tax=Thalassiosira p... [more]
A0A7S2UUF0_9STRA2.890e-15375.25Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa ... [more]
A0A7S4VVM7_9STRA5.790e-15370.43Lipoyl synthase, mitochondrial n=2 Tax=Ditylum bri... [more]
A0A0G4EX03_VITBC1.890e-15272.79Lipoyl synthase, mitochondrial n=2 Tax=Vitrella br... [more]
A0A1Z5JJT1_FISSO5.790e-15272.05Lipoyl synthase, mitochondrial n=2 Tax=Fistulifera... [more]
A0A448Z673_9STRA1.770e-15070.76Lipoyl synthase, mitochondrial n=1 Tax=Pseudo-nitz... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_178contigContig_178:170486..173029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353693|estExt_Genemark1.C_Ctg_1780028
BRITEko00000,ko00001,ko01000
KEGG rclassRC01978
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
KEGG koko:K03644
EC2.8.1.8
Preferred namelipA
Descriptionlipoate synthase activity
COG categoryH
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0320@1|root,KOG2672@2759|Eukaryota
Evalue4.11e-172
Seed ortholog2880.D7FSB7
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionElongator protein 3/MiaB/NifB
Ec32 orthologEc-20_004920.1
TranscriptId354015
TrackFilteredModels1
ProteinId353693
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353693gene_14276Tribonema minus UTEX_B_3156 geneContig_178 170486..173029 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14276_3exon_14276_3Tribonema minus UTEX_B_3156 exonContig_178 170486..171399 -
exon_14276_2exon_14276_2Tribonema minus UTEX_B_3156 exonContig_178 171822..172188 -
exon_14276_1exon_14276_1Tribonema minus UTEX_B_3156 exonContig_178 172746..173029 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14276UTR3_14276Tribonema minus UTEX_B_3156 three_prime_UTRContig_178 170486..171120 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14276CDS_14276Tribonema minus UTEX_B_3156 CDSContig_178 172746..173029 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353693Trimin1|353693|estExt_Genemark1.C_Ctg_1780028Tribonema minus UTEX_B_3156 polypeptideContig_178 171121..173029 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14276 ID=mRNA_14276|Name=jgi.p|Trimin1|353693|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1565bp|location=Sequence derived from alignment at Contig_178:170486..173029- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGCGCAGCGGCCGGCTTGGTTCAGAGTGCCATCTCCAGGCTATGA
CAAGACCAAGTTCAACGATCTGAAGCAATCTCTGTCGGAGCTGAAGTTGC
ATACGGTCTGCGAGGAAGCGCAGTGCCCGAACATCGGGGAGTGCTGGAAT
GGAGGCACTGGGACGATCATGCTGCTTGGAGATACCTGCACACGGGGGTG
CAAGTTCTGTGCCGTCAACACCAGCGCCACCCCGCCTAAGCCCGATCCCT
TTGAGCCCTTCCACACGGCACAGGCTGTGTCCAGGTGGGGCATCAACTAC
GTGGTCCTCACGTCCGTGGACCGCGACGATCTGCCGGACGGCGGCGCGGG
GCACTTTGCGCTCACGGTCGAGCTCATCAAGGAGGCCGCGCCGGGCATGC
TCGTGGAGTGCCTGGTGAGCGACTTCCGCGGCGACGCGGCGGCGGTCGCG
CGGCTCGCGACGTCCGGCCTCGACGTCTACGCGCACAACGTGGAGACGGT
GGAGCGCCTGCAGGCGCACGTGCGCGACCGGCGCGCGGGCTACGCGCAGA
GCCTCGGCGTGCTGCGCGCGGCCAAGGCGGCACGCCCGTCGCTGTACACC
AAGACGTCGCTCATGCTGGGGCTCGGCGAGACGGAGGCGGAGGTGCTGCA
GACCATGCGCGACATCCGCGAAGCCGGCGTCGACGTGCTGACGCTCGGCC
AGTACCTGCGCCCCACGGACCACCACCTGGCGGTTGTGGAGTACGTGCCG
CCGCACAAGTTCGACTGGTACCGCGAGCAGGGCGAGGCGATGGGCTTCAA
GTACGTCGCGAGCGGCCCCCTCGTGCGCTCCAGCTACAAGGCGGGGGAGT
TCTATCTGGAGCACATGGTGCGCAGCGGGCGCGCGGCGCAGGAGCAGGAG
GGGGGGAGCACCGCTGCTGCTAGCGCGTGATGCGCCCGGGGTCGCGCGCT
TGCGGCAGCGGCAGGTCTGCATCTGGCGCAGGCTGCGCGGTGCGTTGCCG
CGCTGGTGTGCGAGTATTTGCGCCGTGGAACGCTTGCTCGCTTTGGCGGT
TGGGGCATCGTCGTTGGAATGGCAGCGGACGCCGCACGCTGCAAGCCATG
CAGTGAACGGAAACTATTATGCAGCGCACGAGCGCGCTTTACCTGTGGGT
GTTGGAGGGCAAGGGGGGCGGTGGAAGGAGCGCAGTGAGCACTTCTACCA
GGCGCCGGCGACGATGAACACGCAATCGCGTGCATCGGCGGCAGGGAAAC
GCTTGCTCTTAGTACGTGTTTCAGCAACACACTCACCCATGTCCACTTCG
AGTTGCCATCAGCACACACGGCGCAGTGCTGACTATGGTGCACCCTCAGA
GGGAGGGCGGCAGTCGCTGCCATTGCCATGGTGCACACTTGGCGCCCACA
ACAGTATTCACGCCTCACAACGTGCACCGTCCCTCATGGAGCAGGTGCAT
TGCTGTAAAGCTCATGGTGTACGCTGATTTTCCTGTAAATAGTTTACGTA
CAGAGCACAGAGCTTAGGTCACGTGTAACACTATTAATGAATGGGGCGGC
GCCATTGCCACAACT
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protein sequence of jgi.p|Trimin1|353693

>Trimin1|353693|estExt_Genemark1.C_Ctg_1780028 ID=Trimin1|353693|estExt_Genemark1.C_Ctg_1780028|Name=jgi.p|Trimin1|353693|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWN
GGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINY
VVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVA
RLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAARPSLYT
KTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVP
PHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQE
GGSTAAASA*
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mRNA from alignment at Contig_178:170486..173029-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14276 ID=mRNA_14276|Name=jgi.p|Trimin1|353693|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2544bp|location=Sequence derived from alignment at Contig_178:170486..173029- (Tribonema minus UTEX_B_3156 )
ATGCCTGCGCAGCGGCCGGCTTGGTTCAGAGTGCCATCTCCAGGCTATGA CAAGACCAAGTTCAACGATCTGAAGCAATCTCTGTCGGAGCTGAAGTTGC ATACGGTCTGCGAGGAAGCGCAGTGCCCGAACATCGGGGAGTGCTGGAAT GGAGGCACTGGGACGATCATGCTGCTTGGAGATACCTGCACACGGGGGTG CAAGTTCTGTGCCGTCAACACCAGCGCCACCCCGCCTAAGCCCGATCCCT TTGAGCCCTTCCACACGGCACAGGCTGTGTCCAGGTACGCATGCCATACG CTTAGAGCACAATCACTTCAGCGAAAGCAATGACCTGGCTGCTTTTAGGA CAGTGCAGTTTGTCGTCTGCCGGATGAGGCAGAGTGTACCCGTAAAGTCA CTTGCGTGTTCAGTTCAATATTTAGTGTGAGTATCTGTCGGATCTTGAAT GCCAGTCTATATTGGTGGAGGTCCTATCGATGTTTTGCCACTTTGCCATT TGTTGATCTGCATGAAGTTACAATGCACTCAAGTATAGGGCTATCTGCTC TTGCAATGGAACGTTAGTCAGATGCAGCACCAACGCTGCTCACCAACAGT CTGGACCATAAAGTGGGACGCAGCAGTAGTGTGATGGCAGCTGCGCAGCT TACGCGGCGGAAGGCAAATTGGTATCTTCTGATTCGTGATCATTTGGACC ATTCAATTTCATAGAGCATGAATTCTGCAATCGGTCAACCTAGAGTTCAG TCCATAGACACTCGCGACGACGTCCTGCCGGTCGCTGCGGCACCTCACCC GCCACGCGCGCCGCCGCCGCCGCCGCCGCCGCCGCGCGCAGGTGGGGCAT CAACTACGTGGTCCTCACGTCCGTGGACCGCGACGATCTGCCGGACGGCG GCGCGGGGCACTTTGCGCTCACGGTCGAGCTCATCAAGGAGGCCGCGCCG GGCATGCTCGTGGAGTGCCTGGTGAGCGACTTCCGCGGCGACGCGGCGGC GGTCGCGCGGCTCGCGACGTCCGGCCTCGACGTCTACGCGCACAACGTGG AGACGGTGGAGCGCCTGCAGGCGCACGTGCGCGACCGGCGCGCGGGCTAC GCGCAGAGCCTCGGCGTGCTGCGCGCGGCCAAGGCGGCACGCCCGTCGCT GTACACCAAGACGTCGCTCATGCTGGGGCTCGGCGAGACGGAGGCGGAGG TGCTGCAGGTGAGCTGCCGCCGCTGCCGCCGCTGCTGCTGCCGCCACGCG AGGCGCGCTGCGCGGCGCCCGTTCGGCTGCGCGCCAGGCGGCGCTCGTGC TGGTGAAGCCGCGTGGCAACTATCCCCAATGCTTAACGGCTTACCGCCTG CTACATCACCACGCCGCCGATGCCGCATTCATTTCATCCGTCGCTGCAGT AAGATATGCAGGCGGCAGCGCCGTCTTGCACTGTCGACCCGCCGCTGCGG CATGCAGTACCCATTCATCCGTTGCTGCTGCTGCGACAGTCTGCACGAGG GCGCCGACGCGGCCTCGCGCGCACCGACTACCTGCAAGCATCCGCAGAGC CAGCTCAGGCAGCGCTGCTCAGCTGCTGCTGCTCATGCCGCCCTCCGCCC CCTGTCCCCCCTCTGCGCGCGCGCGCGCAGACCATGCGCGACATCCGCGA AGCCGGCGTCGACGTGCTGACGCTCGGCCAGTACCTGCGCCCCACGGACC ACCACCTGGCGGTTGTGGAGTACGTGCCGCCGCACAAGTTCGACTGGTAC CGCGAGCAGGGCGAGGCGATGGGCTTCAAGTACGTCGCGAGCGGCCCCCT CGTGCGCTCCAGCTACAAGGCGGGGGAGTTCTATCTGGAGCACATGGTGC GCAGCGGGCGCGCGGCGCAGGAGCAGGAGGGGGGGAGCACCGCTGCTGCT AGCGCGTGATGCGCCCGGGGTCGCGCGCTTGCGGCAGCGGCAGGTCTGCA TCTGGCGCAGGCTGCGCGGTGCGTTGCCGCGCTGGTGTGCGAGTATTTGC GCCGTGGAACGCTTGCTCGCTTTGGCGGTTGGGGCATCGTCGTTGGAATG GCAGCGGACGCCGCACGCTGCAAGCCATGCAGTGAACGGAAACTATTATG CAGCGCACGAGCGCGCTTTACCTGTGGGTGTTGGAGGGCAAGGGGGGCGG TGGAAGGAGCGCAGTGAGCACTTCTACCAGGCGCCGGCGACGATGAACAC GCAATCGCGTGCATCGGCGGCAGGGAAACGCTTGCTCTTAGTACGTGTTT CAGCAACACACTCACCCATGTCCACTTCGAGTTGCCATCAGCACACACGG CGCAGTGCTGACTATGGTGCACCCTCAGAGGGAGGGCGGCAGTCGCTGCC ATTGCCATGGTGCACACTTGGCGCCCACAACAGTATTCACGCCTCACAAC GTGCACCGTCCCTCATGGAGCAGGTGCATTGCTGTAAAGCTCATGGTGTA CGCTGATTTTCCTGTAAATAGTTTACGTACAGAGCACAGAGCTTAGGTCA CGTGTAACACTATTAATGAATGGGGCGGCGCCATTGCCACAACT
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Coding sequence (CDS) from alignment at Contig_178:170486..173029-

>mRNA_14276 ID=mRNA_14276|Name=jgi.p|Trimin1|353693|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=930bp|location=Sequence derived from alignment at Contig_178:170486..173029- (Tribonema minus UTEX_B_3156 )
ATGCCTGCGCAGCGGCCGGCTTGGTTCAGAGTGCCATCTCCAGGCTATGA
CAAGACCAAGTTCAACGATCTGAAGCAATCTCTGTCGGAGCTGAAGTTGC
ATACGGTCTGCGAGGAAGCGCAGTGCCCGAACATCGGGGAGTGCTGGAAT
GGAGGCACTGGGACGATCATGCTGCTTGGAGATACCTGCACACGGGGGTG
CAAGTTCTGTGCCGTCAACACCAGCGCCACCCCGCCTAAGCCCGATCCCT
TTGAGCCCTTCCACACGGCACAGGCTGTGTCCAGGTGGGGCATCAACTAC
GTGGTCCTCACGTCCGTGGACCGCGACGATCTGCCGGACGGCGGCGCGGG
GCACTTTGCGCTCACGGTCGAGCTCATCAAGGAGGCCGCGCCGGGCATGC
TCGTGGAGTGCCTGGTGAGCGACTTCCGCGGCGACGCGGCGGCGGTCGCG
CGGCTCGCGACGTCCGGCCTCGACGTCTACGCGCACAACGTGGAGACGGT
GGAGCGCCTGCAGGCGCACGTGCGCGACCGGCGCGCGGGCTACGCGCAGA
GCCTCGGCGTGCTGCGCGCGGCCAAGGCGGCACGCCCGTCGCTGTACACC
AAGACGTCGCTCATGCTGGGGCTCGGCGAGACGGAGGCGGAGGTGCTGCA
GACCATGCGCGACATCCGCGAAGCCGGCGTCGACGTGCTGACGCTCGGCC
AGTACCTGCGCCCCACGGACCACCACCTGGCGGTTGTGGAGTACGTGCCG
CCGCACAAGTTCGACTGGTACCGCGAGCAGGGCGAGGCGATGGGCTTCAA
GTACGTCGCGAGCGGCCCCCTCGTGCGCTCCAGCTACAAGGCGGGGGAGT
TCTATCTGGAGCACATGGTGCGCAGCGGGCGCGCGGCGCAGGAGCAGGAG
GGGGGGAGCACCGCTGCTGCTAGCGCGTGA
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