mRNA_1425 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161659
Unique NamemRNA_1425
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A836CJC6_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC6_9STRA)

HSP 1 Score: 510 bits (1313), Expect = 8.520e-183
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1 
Query:    1 MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV
Sbjct:    1 MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 252
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BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A835ZE58_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE58_9STRA)

HSP 1 Score: 462 bits (1189), Expect = 2.700e-163
Identity = 226/252 (89.68%), Postives = 238/252 (94.44%), Query Frame = 1 
Query:    1 MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            MK+GGRETCSITSFLVVK  +T VDE+E+D+FI +DDDQYCELCN+VKVLEPRSAQSICLTCGETN YMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIE +VLEKISQELAKTYNHDEL KVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPL+L+QTQEGELLHLF LIQAPWERLRPEGRSNMLSYSYLIHKMA +LGYP VA RFSLLKSK+KMVVQD LWKTIC ELGFRFERS 
Sbjct:   39 MKVGGRETCSITSFLVVKTDATLVDEDEVDDFIDKDDDQYCELCNTVKVLEPRSAQSICLTCGETNGYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEPDVLEKISQELAKTYNHDELCKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLILTQTQEGELLHLFQLIQAPWERLRPEGRSNMLSYSYLIHKMANILGYPDVAERFSLLKSKEKMVVQDSLWKTICNELGFRFERSA 290
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BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A835Z3I5_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I5_9STRA)

HSP 1 Score: 334 bits (857), Expect = 5.440e-113
Identity = 163/252 (64.68%), Postives = 200/252 (79.37%), Query Frame = 1 
Query:    1 MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            MKI     CS+ +F++V A  TT  E ++++ + +DDD YCELCN+VK  + R+AQ+ICLTCG ++ YMVPDTS+REGVSIH+PYLYKR NH RDHL R+ GRESTQIE EV+E+IS ELAKT+  +EL  VT  DIRL+LK+LGLSRLYNHTTRIW LTT  +PLVL+QTQE ELLHLFNLIQ PWE+LRP+ R N LSYSYL+HK++ LLGY  VA+ F LLKSK+K+  QD  W+ IC  +GFRFERSV
Sbjct:   25 MKIPSNVNCSLNNFIIVSAPKTT--EEDLEDAVNQDDDAYCELCNTVKQFDARTAQAICLTCGLSSTYMVPDTSYREGVSIHSPYLYKRINHCRDHLHRITGRESTQIEPEVIERISSELAKTHRPEELCNVTQTDIRLLLKRLGLSRLYNHTTRIWALTTGGKPLVLTQTQEQELLHLFNLIQVPWEKLRPKNRKNFLSYSYLLHKLSLLLGYTDVASHFKLLKSKEKVHFQDLYWQKICAAMGFRFERSV 274
[Close]
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A835Z4M5_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 6.580e-77
Identity = 118/218 (54.13%), Postives = 153/218 (70.18%), Query Frame = 1 
Query:  109 DDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTY--NHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            D   CE CN  K ++ R A ++C  CGE   Y V DTS+REG S+HTPYLYKRSNHF+DHLKR   REST+IE  VLE I  EL K    + D++  V P++IR ILK L +S LYNHT RIW L T + P  L++TQE EL+ +F+++Q PW R RP  R NMLSYSY+IHK+A++LGY  ++  F LLKS+DK+  QD +WK +C++LG+ F RSV
Sbjct:   88 DPHICEPCNCAKSIDLRQATALCPRCGECECYNVIDTSYREGTSLHTPYLYKRSNHFKDHLKRFSARESTEIEDGVLEAIRGELGKRIYGDSDDMTAVAPEEIRAILKSLNMSHLYNHTMRIWSLVTGRRPPTLTETQERELVTMFHMVQEPWLRNRPPSRKNMLSYSYIIHKLAQMLGYDDISRHFKLLKSRDKIAFQDDMWKLVCKDLGWPFVRSV 305
[Close]
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A835Z4D5_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.620e-73
Identity = 124/256 (48.44%), Postives = 172/256 (67.19%), Query Frame = 1 
Query:    1 MKIGGRETCSITSFLVVKACSTTVD---ENEIDEFIGEDDDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAK-TYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            MK+  R   +I +F+ V A S  +    +   D+F+   D   C+ CN  +V++ R A + C  CG++  + V D SFREG S+HTPYLYKRSNHFRDHLKR   RE+T IE +VLE I  EL K  Y+      V+  ++R +LK+L LS LYNH+TRIW L T  +P  L++TQE  L+ +F +IQAP+E+ +P+ RSNMLSYSY+I + A+LLGY  +A  F LLKSK+K+V QD +W+ IC+ELG+R+ RS+
Sbjct:   39 MKLAARPP-NIAAFVSVSAPSKMLSREAQQRRDDFVP--DAHLCDPCNRPRVIDTRQATATCSRCGDSQTFNVIDRSFREGTSLHTPYLYKRSNHFRDHLKRFAARETTTIEDDVLEAIRTELRKRVYDDASFKNVSQDEVRDVLKRLSLSHLYNHSTRIWTLLTGHQPPELTETQEQNLVVMFAMIQAPFEKHKPKERSNMLSYSYVISQCAKLLGYHDIARAFKLLKSKEKVVYQDAIWRKICEELGWRYARSM 291
[Close]
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A836CC98_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC98_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.170e-64
Identity = 108/217 (49.77%), Postives = 146/217 (67.28%), Query Frame = 1 
Query:  109 DDQYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAK-TYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            D   CE CN  +V++ R A ++C  CGE++ Y V D SFREG S+HT YLY       DHLKR   RE+T IE +VLE I  EL K  Y+      V+  ++R+ILK+L LS LYNH+TRIW L T  +P  LS+TQE +L+ +F ++Q  +ER +P+ R NMLSYSY++ + A LLGY  +AA F LLKSK+K+  QDQ+WK IC +LG+R+ RS+
Sbjct:   76 DPHNCEGCNRSRVIDTRQATAVCARCGESDMYNVIDASFREGTSLHTAYLY-----IEDHLKRFSARETTLIEDDVLESIRTELRKRVYDDASFKDVSQDEVRIILKRLSLSALYNHSTRIWTLITGNQPPSLSETQENDLVTMFAMLQTSFERNKPKERRNMLSYSYVLKQCALLLGYDEIAAAFKLLKSKEKIQFQDQVWKLICADLGWRYIRSM 287
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BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A6C0CDD6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CDD6_9ZZZZ)

HSP 1 Score: 139 bits (350), Expect = 6.800e-36
Identity = 79/237 (33.33%), Postives = 130/237 (54.85%), Query Frame = 1 
Query:   85 IDEFIGEDDDQY-----------CELCNSVKVLEPRSAQSICLTCGETNEYMVPDT--SFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            ID ++   DD Y           C+LCN+        ++ +C  CG T + ++     S+++     + + YKR NHF + L + Q +EST+I   + + I  E+ K  N D + K+ PK ++ ILK++G ++ Y H   I  + + ++   LS+ +E +L  LF  IQ P+    P  R N LSYSY++HK   LL Y ++   F LLKS++K++ QDQ+WK IC +L ++F  S+
Sbjct:   96 IDFYMSNIDDTYVLHNEIYMNDKCKLCNNNMSFGLIDSELVCEKCGYTEDIIINSEKCSYKDPPREVSYFAYKRINHFNEWLAQFQAKESTEISDNIYKNIFDEIHKNVNLD-IQKIKPKQMKSILKKMGYNKYYEHIPHIINVMSGKKAPCLSRKEEEQLRTLFKEIQIPFSNNCPPNRKNFLSYSYVLHKFCELLEYDYLLPYFPLLKSREKLLQQDQIWKLICNDLCWQFIESI 331
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BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A3G5A6Z1_9VIRU (Late transcription factor VLTF3-like protein n=1 Tax=Homavirus sp. TaxID=2487769 RepID=A0A3G5A6Z1_9VIRU)

HSP 1 Score: 138 bits (347), Expect = 2.780e-34
Identity = 77/214 (35.98%), Postives = 122/214 (57.01%), Query Frame = 1 
Query:  121 CELCNSVKVLEPRSAQSICLTCGETNEYMVPDT--SFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            CE CN  K L       +C  CG +   ++     ++++ V     Y YKR NHF + L + Q +EST+I  E+ + I  EL K   +D L ++T   ++ ILK+LG+++ Y HTT I    +   P  +++  E EL  +F +IQ P+E+  P+ R N LSYSY++HK  +LL        F LLKS++K+  QD++W+ IC+EL ++F  S+
Sbjct:  276 CEECNMDKTLNQAEGSYVCQNCGISEMIIIESEIPNYKDVVPDKPGYPYKRINHFNEWLSQFQAKESTEIPKEIYDLILTELHKQKFYD-LKRLTLPQMKKILKKLGITQQYEHTTHIISKLSGLPPPTINRETEEELRKMFKMIQLPFEKHCPKARINFLSYSYVLHKFCQLLELDDFIKCFPLLKSREKLRQQDKIWQAICRELKWQFIPSI 488
[Close]
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A5E8CHP0_9ZZZZ (Poxvirus Late Transcription Factor VLTF3 like n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CHP0_9ZZZZ)

HSP 1 Score: 136 bits (342), Expect = 3.610e-34
Identity = 77/215 (35.81%), Postives = 117/215 (54.42%), Query Frame = 1 
Query:  115 QYCELCNSVKVLEPRSAQSICLTCGETNEYMVPDT--SFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERS 753
            +YCE CN+ K+L       IC  CG+    +V     ++++     + Y YKR NHF + L + Q +EST+I  +V +K+  E+ +      L +++   +R ILK+L L++ Y H   I        P  LS+  E +L H+F  IQ P+   RP+GR N LSYSY++HK   LL        F LLKS +K++ QD++WK ICQ + + F  S
Sbjct:  182 KYCEHCNTEKILSACDGMFICTKCGDCEMAIVDSDRPNYKDPSKDTSTYAYKRINHFNEWLNQFQAKESTEIPKDVYDKVLLEINRL-RITNLAELSADKMRKILKKLRLNKYYEHIPHIINKLNGLPPPKLSRETERKLRHMFREIQEPFTLYRPKGRKNFLSYSYILHKFCELLELDEFLPCFPLLKSHEKLLQQDKVWKKICQHVNWEFYPS 395
[Close]
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Match: A0A6C0BUT0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BUT0_9ZZZZ)

HSP 1 Score: 134 bits (336), Expect = 7.270e-34
Identity = 78/214 (36.45%), Postives = 117/214 (54.67%), Query Frame = 1 
Query:  121 CELCNSVKVLEPRSAQSICLTCGETNEY--MVPDTSFREGVSIHTPYLYKRSNHFRDHLKRVQGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLYNHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLSYSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFERSV 756
            CE CN   +++  S   IC  CG T +   M    S+ +       + YKR NHF + L + Q +E+T+I   +   I  EL K  N D L KVT K IR +LK+L  ++ Y++   +  + ++++   L++  E  L  LF  IQ P+ +  P  R N LSYSY++HK   LL Y H+   F LLKS++K+  QDQ+WK IC+EL + +  S 
Sbjct:  116 CEKCNINMLMDNISGNIICSKCGNTKQIIIMTEKNSYNDPPKEANYFAYKRINHFNEWLAQFQAKETTEIPENIYRDIYNELQKNINLD-LTKVTYKQIRDVLKKLKYNKYYDNIPHLINIISNKKAPQLNRESEEMLRSLFKEIQLPFMKHCPPTRKNFLSYSYVLHKFCELLEYDHLLCFFPLLKSREKLQQQDQIWKKICEELKWEYIPSA 328
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161659 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJC6_9STRA8.520e-183100.00Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A835ZE58_9STRA2.700e-16389.68Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A835Z3I5_9STRA5.440e-11364.68Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A835Z4M5_9STRA6.580e-7754.13Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A835Z4D5_9STRA3.620e-7348.44Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A836CC98_9STRA5.170e-6449.77Poxvirus late transcription factor VLTF3 like-doma... [more]
A0A6C0CDD6_9ZZZZ6.800e-3633.33Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A3G5A6Z1_9VIRU2.780e-3435.98Late transcription factor VLTF3-like protein n=1 T... [more]
A0A5E8CHP0_9ZZZZ3.610e-3435.81Poxvirus Late Transcription Factor VLTF3 like n=1 ... [more]
A0A6C0BUT0_9ZZZZ7.270e-3436.45Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:1016141..1016899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161659|e_gw1.18.326.1
DescriptionPoxvirus Late Transcription Factor VLTF3 like
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2BYWV@1|root,2SBBB@2759|Eukaryota
Evalue4.89e-44
Seed ortholog2880.D8LPD2
Hectar predicted targeting categoryother localisation
TranscriptId161981
TrackFilteredModels1
ProteinId161659
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161659gene_1425Tribonema minus UTEX_B_3156 geneContig_18 1016141..1016899 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1425_1exon_1425_1Tribonema minus UTEX_B_3156 exonContig_18 1016141..1016899 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1425CDS_1425Tribonema minus UTEX_B_3156 CDSContig_18 1016141..1016899 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161659Trimin1|161659|e_gw1.18.326.1Tribonema minus UTEX_B_3156 polypeptideContig_18 1016141..1016899 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1425 ID=mRNA_1425|Name=jgi.p|Trimin1|161659|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=759bp|location=Sequence derived from alignment at Contig_18:1016141..1016899+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGATAGGAGGCAGGGAAACGTGCTCCATCACTTCGTTTCTTGTGGT
GAAGGCATGCAGCACCACAGTCGACGAGAACGAGATTGATGAGTTTATCG
GTGAGGACGACGACCAGTACTGTGAGCTCTGCAATTCAGTCAAGGTGCTG
GAGCCGCGTAGCGCACAGAGCATCTGCCTGACGTGCGGTGAGACGAATGA
ATATATGGTGCCGGATACTTCTTTCAGGGAGGGAGTTTCCATTCATACGC
CCTACCTGTACAAGCGCAGCAACCACTTCAGGGACCACCTCAAGAGAGTG
CAGGGGAGAGAGTCAACGCAGATAGAGGCTGAGGTGCTGGAGAAAATCTC
ACAAGAACTCGCCAAGACGTACAATCATGATGAGCTGCACAAAGTGACCC
CAAAAGACATTCGCCTGATACTCAAGCAGCTGGGCTTATCACGCCTTTAC
AATCACACGACGCGAATATGGTGTCTGACCACAGATCAGGAGCCCCTCGT
TCTCTCCCAGACACAGGAAGGAGAGCTGCTCCACCTCTTTAACCTCATAC
AAGCGCCGTGGGAGCGTCTCAGGCCTGAAGGGAGGTCGAACATGCTGTCT
TATAGCTACCTCATCCACAAAATGGCGCGCTTGTTGGGGTACCCCCACGT
CGCGGCGAGGTTCAGTCTGCTGAAGAGCAAGGATAAAATGGTGGTTCAAG
ACCAGTTGTGGAAAACCATATGCCAAGAGCTAGGCTTCAGGTTTGAGAGG
TCAGTGTGA
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protein sequence of jgi.p|Trimin1|161659

>Trimin1|161659|e_gw1.18.326.1 ID=Trimin1|161659|e_gw1.18.326.1|Name=jgi.p|Trimin1|161659|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MKIGGRETCSITSFLVVKACSTTVDENEIDEFIGEDDDQYCELCNSVKVL
EPRSAQSICLTCGETNEYMVPDTSFREGVSIHTPYLYKRSNHFRDHLKRV
QGRESTQIEAEVLEKISQELAKTYNHDELHKVTPKDIRLILKQLGLSRLY
NHTTRIWCLTTDQEPLVLSQTQEGELLHLFNLIQAPWERLRPEGRSNMLS
YSYLIHKMARLLGYPHVAARFSLLKSKDKMVVQDQLWKTICQELGFRFER
SV*
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mRNA from alignment at Contig_18:1016141..1016899+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1425 ID=mRNA_1425|Name=jgi.p|Trimin1|161659|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=759bp|location=Sequence derived from alignment at Contig_18:1016141..1016899+ (Tribonema minus UTEX_B_3156 )
ATGAAGATAGGAGGCAGGGAAACGTGCTCCATCACTTCGTTTCTTGTGGT
GAAGGCATGCAGCACCACAGTCGACGAGAACGAGATTGATGAGTTTATCG
GTGAGGACGACGACCAGTACTGTGAGCTCTGCAATTCAGTCAAGGTGCTG
GAGCCGCGTAGCGCACAGAGCATCTGCCTGACGTGCGGTGAGACGAATGA
ATATATGGTGCCGGATACTTCTTTCAGGGAGGGAGTTTCCATTCATACGC
CCTACCTGTACAAGCGCAGCAACCACTTCAGGGACCACCTCAAGAGAGTG
CAGGGGAGAGAGTCAACGCAGATAGAGGCTGAGGTGCTGGAGAAAATCTC
ACAAGAACTCGCCAAGACGTACAATCATGATGAGCTGCACAAAGTGACCC
CAAAAGACATTCGCCTGATACTCAAGCAGCTGGGCTTATCACGCCTTTAC
AATCACACGACGCGAATATGGTGTCTGACCACAGATCAGGAGCCCCTCGT
TCTCTCCCAGACACAGGAAGGAGAGCTGCTCCACCTCTTTAACCTCATAC
AAGCGCCGTGGGAGCGTCTCAGGCCTGAAGGGAGGTCGAACATGCTGTCT
TATAGCTACCTCATCCACAAAATGGCGCGCTTGTTGGGGTACCCCCACGT
CGCGGCGAGGTTCAGTCTGCTGAAGAGCAAGGATAAAATGGTGGTTCAAG
ACCAGTTGTGGAAAACCATATGCCAAGAGCTAGGCTTCAGGTTTGAGAGG
TCAGTGTGA
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Coding sequence (CDS) from alignment at Contig_18:1016141..1016899+

>mRNA_1425 ID=mRNA_1425|Name=jgi.p|Trimin1|161659|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=759bp|location=Sequence derived from alignment at Contig_18:1016141..1016899+ (Tribonema minus UTEX_B_3156 )
ATGAAGATAGGAGGCAGGGAAACGTGCTCCATCACTTCGTTTCTTGTGGT
GAAGGCATGCAGCACCACAGTCGACGAGAACGAGATTGATGAGTTTATCG
GTGAGGACGACGACCAGTACTGTGAGCTCTGCAATTCAGTCAAGGTGCTG
GAGCCGCGTAGCGCACAGAGCATCTGCCTGACGTGCGGTGAGACGAATGA
ATATATGGTGCCGGATACTTCTTTCAGGGAGGGAGTTTCCATTCATACGC
CCTACCTGTACAAGCGCAGCAACCACTTCAGGGACCACCTCAAGAGAGTG
CAGGGGAGAGAGTCAACGCAGATAGAGGCTGAGGTGCTGGAGAAAATCTC
ACAAGAACTCGCCAAGACGTACAATCATGATGAGCTGCACAAAGTGACCC
CAAAAGACATTCGCCTGATACTCAAGCAGCTGGGCTTATCACGCCTTTAC
AATCACACGACGCGAATATGGTGTCTGACCACAGATCAGGAGCCCCTCGT
TCTCTCCCAGACACAGGAAGGAGAGCTGCTCCACCTCTTTAACCTCATAC
AAGCGCCGTGGGAGCGTCTCAGGCCTGAAGGGAGGTCGAACATGCTGTCT
TATAGCTACCTCATCCACAAAATGGCGCGCTTGTTGGGGTACCCCCACGT
CGCGGCGAGGTTCAGTCTGCTGAAGAGCAAGGATAAAATGGTGGTTCAAG
ACCAGTTGTGGAAAACCATATGCCAAGAGCTAGGCTTCAGGTTTGAGAGG
TCAGTGTGA
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