mRNA_1417 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A835Z0B8_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0B8_9STRA) HSP 1 Score: 649 bits (1674), Expect = 1.220e-235 Identity = 313/317 (98.74%), Postives = 316/317 (99.68%), Query Frame = 1 Query: 1 MKDAPPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKFKKRASTPRKAKS 951 MK+APPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFL+GPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVS DLLCSFQILQPQ+NTKFKKRASTPRKAKS Sbjct: 1 MKNAPPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLAGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSPDLLCSFQILQPQDNTKFKKRASTPRKAKS 317
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A835ZHC4_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC4_9STRA) HSP 1 Score: 549 bits (1415), Expect = 4.200e-196 Identity = 256/314 (81.53%), Postives = 284/314 (90.45%), Query Frame = 1 Query: 7 DAPPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKFKKRASTPRKAK 948 + PFCG+DSIIERLTA+R P+TM +I ESDVATLCA A++AFL PMLLE+ PVKI GDIHGQY DLLRLFEY +YPP + YLFLGDYVDRGKQS+EVICLLFAYRLKYP++FFILRGNHECSSIN++YGF+DECKRRYSV+LYKKFI CF+CMPVSA+VG RVLCMHGGLSP LDSLDS+R+LRRPTP+PDEGL CDLLWSDPEPGT GWGPNDRGVSYTFG DIVDE+T K DIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGG+M VS+ LLCSFQILQPQEN KFK++ STPR +K Sbjct: 4 ETSPFCGVDSIIERLTAVRSCAPNTMVNIAESDVATLCATAREAFLESPMLLEIPPPVKICGDIHGQYSDLLRLFEYGDYPPGSSYLFLGDYVDRGKQSLEVICLLFAYRLKYPERFFILRGNHECSSINRIYGFYDECKRRYSVALYKKFIDCFNCMPVSAVVGNRVLCMHGGLSPHLDSLDSVRELRRPTPIPDEGLMCDLLWSDPEPGTSGWGPNDRGVSYTFGTDIVDEYTQKFDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGMMSVSAGLLCSFQILQPQENEKFKRKPSTPRTSK 317
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: Q4UE52_THEAN (Serine/threonine-protein phosphatase n=2 Tax=Piroplasmida TaxID=5863 RepID=Q4UE52_THEAN) HSP 1 Score: 436 bits (1120), Expect = 1.670e-151 Identity = 195/297 (65.66%), Postives = 241/297 (81.14%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKFK 918 LDSIIERL +R ++P + E ++ LC +++ FLS +LLE+EAP+KI GDIHGQYYDLLRLFEY +PP YLFLGDYVDRGKQS+E ICLL AY++KYP+ FF+LRGNHEC+SIN++YGF+DECKRRYS+ L+K F CF+C+PV+AI+ ++ CMHGGLSP L ++D IRQ+ RPT VPD GL CDLLWSDP+P T GWG NDRGVS+TFG+DIV F AK ++DLICRAHQVVEDGYEFF+KR+LVT+FSAPNYCGEFDNAG +M V L+CSFQIL+P + + K Sbjct: 5 LDSIIERLLEVRGNRPIKSVQLSEDEIKGLCHKSREIFLSQSILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKAFTDCFNCLPVAAIIDDKIFCMHGGLSPELTTMDQIRQISRPTDVPDTGLLCDLLWSDPDPNTTGWGENDRGVSFTFGSDIVVNFLAKHELDLICRAHQVVEDGYEFFSKRRLVTLFSAPNYCGEFDNAGAMMSVDKTLMCSFQILKPVDRKRLK 301
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A5N6U269_9EURO (Serine/threonine-protein phosphatase n=1 Tax=Aspergillus avenaceus TaxID=36643 RepID=A0A5N6U269_9EURO) HSP 1 Score: 436 bits (1121), Expect = 2.010e-151 Identity = 196/305 (64.26%), Postives = 243/305 (79.67%), Query Frame = 1 Query: 13 PPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKFKKRA 927 P LDSII++L +R S+P +PESD+ LC A++ F+S P+ LE+EAP+KI GD+HGQYYDLL LF+Y YPP + YLFLGDYVDRGKQS+E ICLL AY++KYP+ FFILRGNHEC+S+N++YGF+DECKRRY++ L+K F+ CF+C+PV+AI+ ++LCMHGGLSP L+SL+ IR++ RPT +PD GL CDLLW+DPE GWG NDRGVS+TFG D+V F K DIDLICRAHQ VEDGYEFFA RKLVT+FSAPNYCGEFDNAG +M V +LLCSFQIL+P + K RA Sbjct: 4 PTNIDLDSIIDKLLEVRGSRPGQHVKLPESDIQYLCHKAREVFMSQPIFLELEAPIKICGDVHGQYYDLLSLFKYGGYPPESNYLFLGDYVDRGKQSVECICLLLAYKIKYPEGFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTFMDCFNCLPVAAILEDKILCMHGGLSPDLNSLEQIRRIMRPTDIPDSGLLCDLLWADPEKDLTGWGENDRGVSFTFGPDVVHRFVQKHDIDLICRAHQCVEDGYEFFASRKLVTLFSAPNYCGEFDNAGAMMSVDENLLCSFQILKPAQKQKISLRA 308
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A1Y2I2V2_9FUNG (Serine/threonine-protein phosphatase n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I2V2_9FUNG) HSP 1 Score: 434 bits (1115), Expect = 1.190e-150 Identity = 194/301 (64.45%), Postives = 242/301 (80.40%), Query Frame = 1 Query: 1 MKDAPPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQE 903 M D+ P +DSIIERL +R S+P ++PE +V LC ++D F+S P+LLE+EAP+KI GD+HGQYYDLLRLFEY +PP YLFLGDYVDRGKQS+E ICLL AY++KYP+ FFILRGNHEC+SIN++YGF+DECKRRYS+ L+K F CF+C+P++AIV ++ CMHGGLSP L S++ IR++ RPT VPD GL CDLLW+DP+ G+ NDRGVS+ FGAD+V F K D+DLICRAHQVVEDGY+FFAKR+LVT+FSAPNYCGEFDNAGG+M V L+CSFQ+L+P E Sbjct: 1 MPDSNPEPNVDSIIERLLEVRGSRPGKQVALPEHEVRWLCTKSRDIFVSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLPIAAIVDEKIFCMHGGLSPDLQSMEQIRRVMRPTDVPDTGLLCDLLWADPDKDVSGFAQNDRGVSFVFGADVVTRFLQKHDMDLICRAHQVVEDGYQFFAKRQLVTVFSAPNYCGEFDNAGGMMCVDESLMCSFQVLKPAE 301
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: Q2U8P0_ASPOR (Serine/threonine-protein phosphatase n=16 Tax=Aspergillus TaxID=5052 RepID=Q2U8P0_ASPOR) HSP 1 Score: 434 bits (1115), Expect = 2.340e-150 Identity = 201/308 (65.26%), Postives = 245/308 (79.55%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKFKKRASTPRKAKS 951 LDSII RL +R S+P + +S++ LC A++ F+S P+LLE+EAP++I GD+HGQYYDLLRLFEY YPP YLFLGDYVDRGKQS+E ICLL AY++KYP+ FFILRGNHEC+SIN++YGF+DECKRRY+V L+K FI CF+C+P++AIV ++ CMHGGLSP L+S++ IR++ RPT +PD GL CDLLW+DPE GWG NDRGVS+TFG D+V F K DIDLICRAHQ VEDGYEFFAKRKLVT+FSAPNYCGEFDNAG +M V LLCSFQIL+P E KK+A+ R KS Sbjct: 9 LDSIINRLLEVRGSRPGKHVRLQDSEIQYLCHKAREVFISQPILLELEAPIQICGDVHGQYYDLLRLFEYGGYPPDANYLFLGDYVDRGKQSVECICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNVKLWKTFIDCFNCLPIAAIVEDKIFCMHGGLSPDLNSMEQIRRIMRPTDIPDCGLLCDLLWADPEKEITGWGENDRGVSFTFGPDVVHRFVQKHDIDLICRAHQCVEDGYEFFAKRKLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAE----KKKANITRGFKS 312
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=PP12_SCHPO) HSP 1 Score: 433 bits (1114), Expect = 2.890e-150 Identity = 195/292 (66.78%), Postives = 237/292 (81.16%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQE 903 +D+IIE+L R+ KP + ++++ LC ++ FLS PMLLE+EAP+KI GDIHGQY DLLRLFEY YPP YLFLGDYVDRGKQS+EVICLLFAY++KYP+ FF+LRGNHE +SIN++YGF+DECKRRYS+ L+K F CF+CMPV+A++ ++ CMHGGLSP L+SLD I+++ RPT +PD GL CDL+WSDPE GWG NDRGVSYTFGAD+V F K D+DLICRAHQVVEDGYEFF KR+LVTIFSAPNYCGEFDN G +M V+ DLLCSFQIL+P E Sbjct: 5 IDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDGYEFFGKRQLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQILKPAE 296
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A1Y2CUL7_9FUNG (Serine/threonine-protein phosphatase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CUL7_9FUNG) HSP 1 Score: 434 bits (1115), Expect = 3.110e-150 Identity = 193/292 (66.10%), Postives = 239/292 (81.85%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQE 903 +DS+IERL +R S+P + E ++ LC A+D F+S P+LLE+EAP+KI GD+HGQYYDLLRLFEY +PP + YLFLGDYVDRGKQS+E ICLL AY++KYP+ FFILRGNHEC+SIN++YGF+DECKRRY++ L+K F CF+C+PV A++ ++LCMHGGLSP L+SL+ IR++ RPT +PD GL CDLLWSDP+ T GWG NDRGVS+TFG D+V F K D+DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAG +M V L+CSFQIL+P E Sbjct: 14 IDSVIERLLEVRGSRPGKQVMLAEHEIRYLCTKARDIFISQPILLELEAPIKICGDVHGQYYDLLRLFEYGGFPPDSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVCALIDEKILCMHGGLSPDLNSLEQIRRVMRPTDIPDTGLLCDLLWSDPDKETSGWGENDRGVSFTFGPDVVTRFLEKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMSVDDTLMCSFQILKPAE 305
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: A0A1J1I5E8_9DIPT (Serine/threonine-protein phosphatase n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1I5E8_9DIPT) HSP 1 Score: 433 bits (1114), Expect = 3.570e-150 Identity = 195/296 (65.88%), Postives = 243/296 (82.09%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQENTKF 915 +D+II RL +R S+P + ES++ LC +++ FLS P+LLE+EAP+KI GDIHGQYYDLLRLFEY +PP + YLFLGDYVDRGKQS+E ICLL AY++KYP+ FF+LRGNHEC+SIN++YGF+DECKRRY++ L+K F CF+C+PV+AIV ++ C HGGLSP L S++ IR++ RPT VPD+GL CDLLWSDP+ T+GWG NDRGVS+TFGA+IV +F AK D DLICRAHQVVEDGYEFFAKR+LVT+FSAPNYCGEFDNAG +M V L+CSFQIL+P + KF Sbjct: 9 IDNIIARLLEVRGSRPGKNVQLTESEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEIVAKFLAKHDFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKRKF 304
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Match: S9VPN3_SCHCR (Serine/threonine-protein phosphatase n=2 Tax=Schizosaccharomyces TaxID=4895 RepID=S9VPN3_SCHCR) HSP 1 Score: 433 bits (1113), Expect = 4.100e-150 Identity = 193/292 (66.10%), Postives = 241/292 (82.53%), Query Frame = 1 Query: 28 LDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGPMLLEVEAPVKIAGDIHGQYYDLLRLFEYAEYPPCTKYLFLGDYVDRGKQSIEVICLLFAYRLKYPDKFFILRGNHECSSINKLYGFFDECKRRYSVSLYKKFIACFDCMPVSAIVGGRVLCMHGGLSPSLDSLDSIRQLRRPTPVPDEGLYCDLLWSDPEPGTVGWGPNDRGVSYTFGADIVDEFTAKLDIDLICRAHQVVEDGYEFFAKRKLVTIFSAPNYCGEFDNAGGVMIVSSDLLCSFQILQPQE 903 +D+IIE+L ++H KP + E+++ LC ++ FL+ PMLLE+EAP+K+ GDIHGQY DLLRLFEY +PP T YLFLGDYVDRGKQS+EVICLLFA+++KYP+ FF+LRGNHEC+SIN++YGF+DECKRRY++ ++K F CF+CMPV+AIV ++ CMHGGLSP L++++ I+++ RPT +PD GL CDLLWSDPE GWG NDRGVSYTFGAD+V+ F K D+DLICRAHQVVEDGYEFFAKR LVTIFSAPNYCGEFDN G +M V+ DLLCSFQIL+P E Sbjct: 5 IDTIIEKLIKVQHVKPGRQTQLTEAEIRYLCTTSRSLFLNQPMLLELEAPLKVCGDIHGQYSDLLRLFEYGGFPPDTNYLFLGDYVDRGKQSLEVICLLFAFKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKIWKIFTDCFNCMPVAAIVDEKIFCMHGGLSPDLNAMEQIQRIIRPTDIPDTGLLCDLLWSDPEKDVTGWGDNDRGVSYTFGADVVNRFLQKHDMDLICRAHQVVEDGYEFFAKRLLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQILKPAE 296 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161724 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1417 ID=mRNA_1417|Name=jgi.p|Trimin1|161724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=954bp|location=Sequence derived from alignment at Contig_18:999556..1000509+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAGGACGCACCGCCATTCTGTGGCCTGGATTCGATAATTGAACGTTTback to top protein sequence of jgi.p|Trimin1|161724 >Trimin1|161724|e_gw1.18.177.1 ID=Trimin1|161724|e_gw1.18.177.1|Name=jgi.p|Trimin1|161724|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=318bp MKDAPPFCGLDSIIERLTALRHSKPDTMASIPESDVATLCAMAKDAFLSGback to top mRNA from alignment at Contig_18:999556..1000509+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1417 ID=mRNA_1417|Name=jgi.p|Trimin1|161724|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=954bp|location=Sequence derived from alignment at Contig_18:999556..1000509+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:999556..1000509+ >mRNA_1417 ID=mRNA_1417|Name=jgi.p|Trimin1|161724|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=954bp|location=Sequence derived from alignment at Contig_18:999556..1000509+ (Tribonema minus UTEX_B_3156 )back to top |