mRNA_14091 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350107
Unique Name	mRNA_14091
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A835YXJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ4_9STRA)

HSP 1 Score: 835 bits (2158), Expect = 1.110e-302
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 3

Query:   63 MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV 1580
            MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV
Sbjct:    1 MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV 506

[Close]

BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A835YRY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY4_9STRA)

HSP 1 Score: 475 bits (1223), Expect = 1.500e-162
Identity = 273/509 (53.63%), Postives = 305/509 (59.92%), Query Frame = 3

Query:   63 MHYFRRPKEALHRRRSYVADRGFQDHYS--EGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTAT--HWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQL 1577
            M Y RRPKE LHRR   + ++ FQD Y   +GLADGL VSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDF LTVRARLSPPVSLSR+ AATQL MP FTVCRPLLL GND A WGDWQGIPY T V C+RT  Y A G  +DDG VRHR+N T       ITT  GD C++I I   I                        DID+NKDLRY ++F T                       +  DT++WA+YYV+D+ P D IDWN +E++YDFG VK+GNHY AK                                                    ITK+RD+HL CT GGL                           SC  TT+ SY AE+TML+++     +VFDFTSDALGLMIL EQDPVDWLNLVSNAYSYLGYCLAAFTLLF  ARTARLRELEEAKTLHILKQHLA V  QQR LTEC+APVDTV  DAR   VQL
Sbjct:    1 MQYIRRPKETLHRRHGSIDNQSFQDQYGNLKGLADGLTVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFALTVRARLSPPVSLSRNAAATQLNMPNFTVCRPLLLRGNDEANWGDWQGIPYTTQVRCVRTARYDAGGTPADDGAVRHRINITTAVEQQAITTFTGDRCDIISIKNGI------------------------DIDINKDLRYEIQFDT-----------------------RGNDTYDWASYYVSDKRPWDAIDWNANEVQYDFGAVKMGNHYRAK----------------------------------------------------ITKQRDIHLNCTHGGL---------------------------SCAPTTSDSYSAEVTMLATETKPDIVVFDFTSDALGLMILEEQDPVDWLNLVSNAYSYLGYCLAAFTLLFSCARTARLRELEEAKTLHILKQHLATV--QQRALTECYAPVDTV--DARQD-VQL 378

[Close]

BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A836CBG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG7_9STRA)

HSP 1 Score: 303 bits (775), Expect = 3.150e-95
Identity = 184/454 (40.53%), Postives = 223/454 (49.12%), Query Frame = 3

Query:  141 YSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWG-DWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPIT----TSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLA 1487
            Y EGLADGL VSWPP+GV RRWH  ANA FV+L++  + VC  D   TV AR SP VS SRDP  T ++MP +TVCRPLL   +D  G+G DWQG PYAT V CL T      GV ++ G VRHR  C     PI     T KGD C+VI  +                           +IDV++DLR  V  +                         P DT++W +YYVT++ P  G DW TS+  YDFG VK+GN YA +                                                    IT+ER   L C+ GGL      RS                           SY A  ++++ +    ++VF FTSD LG+ +L EQDPVDWLNL+SN YSY GYCLAAF LLFGFART RLRELEEAKTLHIL+QHLA
Sbjct:   20 YGEGLADGLAVSWPPAGVPRRWHGRANAVFVSLILACIGVCAFDVTKTVLARQSPSVSYSRDPTTTAVRMPCWTVCRPLLKAEDDAGGFGGDWQGYPYATQVTCLMTAFSDDQGVPTEGGNVRHRARCPVE--PIVERMVTPKGDACDVIRFEDG------------------------HEIDVDQDLRLEVTIVPTT----------------------PADTYDWVSYYVTEDMPTGG-DWKTSDQAYDFGAVKLGNQYAVQ----------------------------------------------------ITQERQERLECSWGGLKCRHVARS---------------------------SYSAGTSLITQESDGLSVVFSFTSDPLGVTLLREQDPVDWLNLLSNVYSYFGYCLAAFALLFGFARTTRLRELEEAKTLHILQQHLA 345

[Close]

BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A836CBH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.430e-13
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 3

Query: 1068 ATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDA-LGLMILAEQDPVDWLNLVSN 1364
            AT+TK+RDVHLACTRGGL  A                            + T SY AE+TML+++     +VF+FTS+A LGLMIL E DPV WLNLV+ 
Sbjct:    2 ATVTKQRDVHLACTRGGLSGAP-------------------------PPSVTVSYSAEVTMLATEGNPNAIVFNFTSEAALGLMILMEHDPVHWLNLVTT 76

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350107 vs. uniprot

BLAST of jgi.p|Trimin1|350107 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835YXJ4_9STRA	1.110e-302	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YRY4_9STRA	1.500e-162	53.63	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CBG7_9STRA	3.150e-95	40.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CBH3_9STRA	1.430e-13	46.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_56	contig	Contig_56:241586..250566 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350107\|estExt_Genemark1.C_Ctg_560025
Hectar predicted targeting category	signal anchor
TranscriptId	350429
Track	FilteredModels1
ProteinId	350107

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350107	gene_14091	Tribonema minus UTEX_B_3156	gene	Contig_56 241586..250566 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350107	Trimin1\|350107\|estExt_Genemark1.C_Ctg_560025	Tribonema minus UTEX_B_3156	polypeptide	Contig_56 241586..248521 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_14091_13	exon_14091_13	Tribonema minus UTEX_B_3156	exon	Contig_56 241586..242014 -
exon_14091_12	exon_14091_12	Tribonema minus UTEX_B_3156	exon	Contig_56 242191..242201 -
exon_14091_11	exon_14091_11	Tribonema minus UTEX_B_3156	exon	Contig_56 242347..242416 -
exon_14091_10	exon_14091_10	Tribonema minus UTEX_B_3156	exon	Contig_56 242514..242567 -
exon_14091_9	exon_14091_9	Tribonema minus UTEX_B_3156	exon	Contig_56 244169..244219 -
exon_14091_8	exon_14091_8	Tribonema minus UTEX_B_3156	exon	Contig_56 245693..245743 -
exon_14091_7	exon_14091_7	Tribonema minus UTEX_B_3156	exon	Contig_56 245820..246001 -
exon_14091_6	exon_14091_6	Tribonema minus UTEX_B_3156	exon	Contig_56 246327..246395 -
exon_14091_5	exon_14091_5	Tribonema minus UTEX_B_3156	exon	Contig_56 246929..247006 -
exon_14091_4	exon_14091_4	Tribonema minus UTEX_B_3156	exon	Contig_56 247141..247270 -
exon_14091_3	exon_14091_3	Tribonema minus UTEX_B_3156	exon	Contig_56 247445..247700 -
exon_14091_2	exon_14091_2	Tribonema minus UTEX_B_3156	exon	Contig_56 248382..248535 -
exon_14091_1	exon_14091_1	Tribonema minus UTEX_B_3156	exon	Contig_56 250519..250566 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_14091	CDS_14091	Tribonema minus UTEX_B_3156	CDS	Contig_56 248382..248521 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_14091	UTR5_14091	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_56 250519..250566 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_56:241586..250566-
coding sequence from alignment at Contig_56:241586..250566-

spliced messenger RNA

>mRNA_14091 ID=mRNA_14091|Name=jgi.p|Trimin1|350107|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1583bp|location=Sequence derived from alignment at Contig_56:241586..250566- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCGGATGCGGCGAATACCGGAGCGCTTATAAGGCTGTGAGGCGCGAGGG
CGACCAACCCGCATGCACTACTTCCGGCGCCCGAAGGAGGCGCTCCACAG
GCGCCGCAGCTACGTCGCCGACCGCGGCTTCCAAGACCACTACAGTGAGG
GCCTCGCAGACGGCCTGGGAGTGAGCTGGCCGCCCTCGGGCGTGTCGCGC
AGATGGCACCGGCACGCCAACGCGACCTTCGTGGCGCTCGTCATCGTCTT
CGTCTGCGTCTGTGTAACCGACTTTGTGCTCACCGTGCGCGCGCGCCTCT
CGCCGCCCGTCAGCCTGAGCCGAGACCCCGCTGCGACGCAGTTGAAGATG
CCGTACTTCACCGTGTGCCGCCCGCTGCTGCTGATTGGCAACGACGTGGC
GGGCTGGGGGGATTGGCAGGGGATCCCCTACGCGACGAGCGTGGGGTGCC
TGCGCACGGTGTTGTACGGCGCTGATGGTGTTGAATCGGATGATGGAACG
GTGCGCCACCGCGTGAATTGCACCGCGACACACTGGCCCATCACCACGTC
CAAGGGCGACGGCTGCGAAGTCATCGGGATAGACCAAGCCATAGCCAGTG
GGCAGAGCTACTGGCCCATTACCACGTTCAAGGGGGACGGCTGCGAGGCC
ATTGGGATACACCAAGACATTGACGTAAACAAGGACCTGCGGTACGCGGT
GGAGTTCATCACGCCCCGCGCAGGCATGGACATGCACATCGACGTGAACA
AGGACCTGCGGTACGCAGTGGAGTTCATCACCCAGCCGCAAGACACGTTC
AACTGGGCAAACTACTACGTCACGGACGAGGCGCCACCCGATGGTATCGA
CTGGAACACCAGCGAGTTGCGGTATGATTTTGGCGGCGTCAAAGTCGGGA
ACCACTATGCCGCGAAGTTGCGGTACGATTTCGGCGGCGTCAAAGTCGGG
AACCACTACGCCGCAAAGAGGAAGTATGACTTTGGCGGCGTAAAAGTCGG
CAACCACTACGCCGCACAGCCGCCACCGCCGCAGATTACGGAGAAGCGCG
ATGTGCACTCGGAGAGGGCTACTATCACGAAGGAGCGCGACGTGCACCTG
GCGTGCACGCGTGGCGGCCTAGACAGCGCTGAGTTTACCAGAAGTCACGA
AGGAATCACGAAGGAGCGCGACGTGCACCTGGCGTGCACGCGCGGCGGCC
TCTCCTGCACGCGCACCACGACCTACAGCTACGGCGCCGAGATGACCATG
CTGTCGAGCGACGAGGGCAACACGACGCTCGTCTTCGACTTCACGAGCGA
CGCCCTCGGCCTCATGATCCTCGCGGAGCAGGACCCCGTCGACTGGCTCA
ACCTCGTGAGCAACGCGTACAGCTACCTCGGCTACTGCCTCGCGGCGTTC
ACGCTGCTGTTCGGCTTTGCGCGCACGGCGCGCCTGCGCGAGCTCGAGGA
GGCCAAGACGCTGCACATACTGAAGCAGCACCTCGCGGCGGTGGAGCGGC
AGCAGCGCATGCTTACGGAGTGCCATGCGCCCGTGGATACCGTGGTGGAC
GACGCGCGGCACAGCGCGGTGCAGCTGGTCTGA

protein sequence of jgi.p|Trimin1|350107

>Trimin1|350107|estExt_Genemark1.C_Ctg_560025 ID=Trimin1|350107|estExt_Genemark1.C_Ctg_560025|Name=jgi.p|Trimin1|350107|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=507bp
MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHR
HANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFT
VCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHR
VNCTATHWPITTSKGDGCEVIGIDQAIASGQSYWPITTFKGDGCEAIGIH
QDIDVNKDLRYAVEFITPRAGMDMHIDVNKDLRYAVEFITQPQDTFNWAN
YYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKLRYDFGGVKVGNHYA
AKRKYDFGGVKVGNHYAAQPPPPQITEKRDVHSERATITKERDVHLACTR
GGLDSAEFTRSHEGITKERDVHLACTRGGLSCTRTTTYSYGAEMTMLSSD
EGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLF
GFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARH
SAVQLV*

mRNA from alignment at Contig_56:241586..250566-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_14091 ID=mRNA_14091|Name=jgi.p|Trimin1|350107|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8981bp|location=Sequence derived from alignment at Contig_56:241586..250566- (Tribonema minus UTEX_B_3156 )
GGCGGATGCGGCGAATACCGGAGCGCTTATAAGGCTGTGAGGCGCGAGGT
AAGTAGTGCGTCGGCTCGACGTACATAAGCAAAGATCAACTTCCTGCTCG
ACGCAATTGTAGCGAGCAGCAGCGTGGCGCTGCTGCTGAGCTGTGCAGTG
CATGGCAGTACTTGCCTGTGCAAAGTGCTCTGTATCATACTGTCGCACCC
GATCAGCATCAGGTTCACGTGAACATTCTGCTGCCGCGCACTGCCGGCCT
TAAGACAATACGCTGCCGCTGAGTCTTGCGGCTGTCGTGGCAAGCAACCT
CAGCAGCACACAAAGTGGGATTTTGCCTACACGCAACTGATTCCCTATGC
GAGTTGAGACGCTGGTATGAGGCACCATGAGCACAACAAATGCCCTTCGC
GGTCTGCTGTTCTGGTTACGAATATATTGCATGGTTTGTCAGTTTGTCCT
TCATGCAGACACAGTGCAGTCTGGTCGTCCTGATGGCTAGTGGTTAGGTA
CCTCTGATATGGTTCTTCTTTCAAATGCTTGTGATACCGATACTTCGACG
TGCCAAACATGTCTGTTCATAGTCAAACCTACCTCCAGCTGAACGCACCC
TCAGCTAGCTCATTCCTGCACTCACTGTCAGCAGTGACGCTTCTAAAATA
CTATCCATTGTGAGACTTTGCTGATTTTGACGTAGATGTCGCACCCACGC
ACCCCCTCGCTATAAGACGGGTGCAACGTGTCTCAGCACCACTTCGCTCG
TGCCCAAAAAATGTGTGCAACTTTACACCCCCTGTGATTGGCATTTCTAC
ATGGTCATGTAGCGATGTTGCTGTTTTAGTCCGCCCGCATTCAAGCCTCC
GTCACTCAAGGTCAGACTCAGAGTCATCCAGGCGCGCTGTGGCTTCTAAT
TTAAGCCCTGCCACACAGCTACGACTCACGCTTACCATACCAAGTGCAGC
TTGGGGTTTGACGTATGCGACTATGAGTGCAGAAAGAGCTGGCGTGTGGC
AGAGGGTGTCTCAGCGAACCGCGGTGATGCGCCGGGAATCAGTCATGCAG
ATGCAAAATGGTTTTTGCCATACCAAAGCCCGGAACTTCAACAGCCCACG
CAAGGATGTAACTGTAGGTAACCGCGCTGAAGCGCATCGTCAGCACGAAT
TCTTGACACTTGCACTGAGCCACCGCTGTATGCATACCTACCTCGCCGAT
GGCACGTCACAGGCATCTGCACGCACTGCTTCCAATTTCCATCGGCGGCA
CGCAGTGCGCGCATGCATGCAGTGTGCATCCCACGCATTGTAGTGCATTG
CGGACGCCTGTGACGTGCCATCGGTGTGCGCCAGAGTAGTATGCATCTAC
AAGTCCGAGCATCGTCAGCGGGCGACTTCGCGGTTTTATAATACTCGTGC
CTATGTGCCACTGTCTCATGCGCACATACCCTGCCGCCACGCAAATGGTA
CGTCACGACTTTTGACGTCAAAAGGAAGTGTGGCAAGCAACGGCACGGCA
CGCATTGAGTGCCCCACGCGTCGGTTTCAATCCCTGTGATCCGTTTCCAA
TCATCATCCGCAGAGGTTTACGTCATCTGGCCACCGCCATCATCTTGAAC
AATTGTAACATGCATACGTACCCACCCGTCGCAGGCGACCAACCCGTATG
CATTACTTCCGGCGTAAATGTATGTATGTATGCCCCGTAAGAACTGAGAT
GCAAAAGCAACAAGTATATTGAAGAGTAATCTATGTACACTAAAACAAAT
ATCGAGACAAACTCACCTCACTTGTGTTGTAAGCCTTGTTGAGCTGCTGT
GATGTACGTACGTAACTGTGTTGCAGGCGACCAGCCCGCATGCACTACTT
CAGGTGCCCAAAGGAGGTGCTCCACAGGCGCCGCAAGCAGCTGCGCGCGC
ATCGCATGCCCCATGTATCGGTTCAAATCCTTGCCAGTTATTTCTCGAGC
ACCATTAACAGAGGACCGCGCCACCTGGCTTACCTTAATAACGTTGAGAT
GCCGTGATATACATACCTACCTGTGTCGCAGGGCGACCAACCCGCATGCA
CTACTTCCGGCGCCCGAAGGAGGCGCTCCACAGGCGCCGCAGCTACGTCG
CCGACCGCGGCTTCCAAGACCACTACAGTGAGGGCCTCGCAGACGGCCTG
GGAGTGAGCTGGCCGCCCTCGGGCGTGTCGCGCAGGTAAGTAGGTATATG
TTGCTCTGTCACTCACATGCGGGTCTTTACTATATGCATGATATTCATGC
GTATATATGCACCTACAGTAGCGTGCAGGCAGGTATTAAGTGTGTAGAGT
GTGACACGGAGCTGGCCGCCCTCGGGCGTGTCGCGCAGGTATTGTAGGTA
TATGCTCATGGGTATGTATGTATGCGACGCGCAGGTCGCGCAGGGTTGTA
CATATATCTTGCTCATGGGTATGCATGTACCTGTCATGCATGTATGCATG
CATCAAGTGTGTGGGCAGTGACAGTGAGCTGGCAGCCCTCGCGCGTGTCA
TGCAGGTATGTAGGTATATGTAGCTCATGGGTATGTATGTACGTGGTGTG
CAGGTATGCTTGTTTAAAGCGTGTGGGCTGTAAGAGTGAGCTGGCTGCGC
GCTCGGGCCTGTTGCACACGTACGCAGGTACATGTAGCTCACAGGTATGT
ATAGCTATGGTATAGCTATAGCTGCAGGTAGGTGTAAAACAGGCGTGTTT
TCATGTCACAGCATCTATGCATGTGTTAGTTGAAGAACATCATTCAACAA
CATGCCTTTGGGGGGGGGGGGGGGGTTGACCTCCCGTTCTTTCTGGATCT
CCACAACTGGCTGACCCCCCCCTCCCCCCCCCCCCCCCCCCCCCTATCAC
ATTTGCATTTGTGCAGATGGCACCGGCACGCCAACGCGACCTTCGTGGCG
CTCGTCATCGTCTTCGTCTGCGTCTGTGTAACCGACTTTGTGCTCACCGT
GCGCGCGCGCCTCTCGCCGCCCGTCAGCCTGAGCCGAGACCCCGCTGCGA
CGCAGTTGAAGATGCCGTACTTCACCGTGTGCCGCCCGCTGCTGCTGATT
GGCAACGACGTGGCGGGCTGGGGGGATTGGCAGGGGATCCCCTACGCGAC
GAGCGTGGGGTGCCTGCGCACGGTGAGCTTGGGCGTGATGAAGTCTATTT
GACCGCTGTGCATATGGTGGCACTGTCTGGAGTGCTGCAGCAGCGGCGAC
CACGATTATTGGTGGAAGGCATTCAATGCGACAGCTAACCACACCTTGTC
ACCTAGAGCTCTACGATCTTTTGATGCGTTTCCCTTCACATCACAGGTGT
TGTACGGCGCTGATGGTGTTGAATCGGATGATGGAACGGTGCGCCACCGC
GTGAATTGCACCGCGACACACTGGCCCATCACCACGTCCAAGGGCGACGG
CTGCGAAGTCATCGGGATAGACCAAGGTGCGCTCTCGCCTGTCGGGCAGA
ACCACCAAGCATTTCATGTAGCATGGGCATGAGAGATCGCATGCGTCACG
TGAGACTAGGATTAGGGAAAGGTTTGGGGTTAGGGCTGGGGTTGGCTGTC
TATGAGACAGCCATAGCCAGTGGGCAGAGCTACTGGCCCATTACCACGTT
CAAGGGGGACGGCTGCGAGGCCATTGGGATACACCAAGGTGCGCGCTATT
GTGCCAAGTCTACATCTGCCGTTGGACACAACTACCGTGCATATGTGCAT
AGCCTCTCAGCACAGGCACGAGCGGCTCAGGGTTAGGGCTAGGGTTAGGG
AGGCTTAGAGTTAGGGTTAGCCATCTAGATTTAGGGTTAGGGTTAGGGTT
TAATTTAGGGCTAGAATAGGGTTAGCGACCCGTTGGCATCTCTGCATCCA
GCGCGTTCACCTCCATGGCTTCGCGCGATGATCACTGCGCTCAAAACACG
GACACAGCAAGATCCCCATGTTACCTGACAAACCAATGGCCATTACCCCT
CGCAGACACTGACGTGAACAAGGACCTGCTATACGCGGTGGAGTTCATCA
AGCAGCCACGCAGGACACGTTTAATTTGGACGTTTGTGTACTAAACTTCA
AATTGAAAGTTCTGCACTAAACTTCAAATTGAAGTTTTTATGCGCACATC
CGCATCCAAAACGCGGACACTGCCACATTCCCCATGTTCCCGACGAATCA
ACGGCCACCGCCTCCTCGCAGACATTGACGTAAACAAGGACCTGCGGTAC
GCGGTGGAGTTCATCACGCCCCGCGCAGGCATGGACATGCGTTCAAGGAT
GAACTTCAAGTTGAAGTACACGCACCCGTCCCATGCACCCGTCCCCATAC
TGTCACAGTGTTCCGCACAATGACTGCGTCAAAACGCGGACACTGCAAGA
TCTTCATGTCTTGACGATTTGATCATCGTCGCCCCTTGCAGACATCGATG
TGAACAAGGACCTGCGGTGCGCGGTGCAATTTATCACGCAGCCGCAAGAC
ACGTTCAACTTGGAAGTTTGTGTACTAACCTTCAAATTGAATTTTTGCAC
AAAATTTCAAATTGAAGTTTCTACGGACCTGACGAACCAGCAGCCACCGC
CCTTTGCAATTGCAGACATCGACGTGAACAAGGACCTGCGGTACGCAGTG
GAGTTCATCACCCAGCCGCAAGACACGTTCAACTGGGCAAACTACTACGT
CACGGACGAGGCGCCACCCGATGGTATCGACTGGAACACCAGCGAGTTGC
GGTATGATTTTGGCGGCGTCAAAGTCGGGAACCACTATGCCGCGAAGGTG
AGCAACCTACTAGCGGCTACAGCATACAGTTTGCCCTTAGTGTGTCCCAG
GAGCTGTGTTGCGCAGGTGCAAGTTGCGGTACGATTTCGGCGGCGTCAAA
GTCGGGAACCACTACGCCGCAAAGGTGAGCTACAGCATGGGAGTGTATTG
GAATATATGGAAACGAATCAAAAGATTGTGGAGCTCTATATATTAGAAAT
AATATTGGAGCTGTTGCGCAAGTGAGCATTTTGGCTGGTGTACGAGCTAT
GGTACTTCCTCTGTCCCATAAGTATGTTTCCCTTAAAGTCGCCTCAAAGC
TAACTTTTTGAGATGGGCTTGTTGGTGAAAAGTTCCTATGTAAAAATTGA
TGGTCAAGTCCCGAGCTTTCCGGAACAATTTTCAAAAATGAAGTCCGTTA
CAATCTTCACCATTGAAGTAGAGCTTATCTGAAAAAAAGCCAGATTTCGG
AGTCAAATCTGGGCCAAAATTTCGCCAAAAGTCAAATCCGCCGTGGCGCG
CAAAAATCACTGTGGCAGCTCCACACACAGCACACGCGCTACATGACACT
TGAGGAGGAGTGGTTGCTCACAGCTGCCAATGATGGCATTAGTTCCAGAG
TTACTTAGCGCACCACATGGCCAGGGTGTGCCTGTGGACGGCAAGGCGGC
TTTTGGCGTGGAGGTCCCAAATTGAGCTAGGTGGCAGTCAGGTGGCTACA
ACTCGCTGCCGGCACTACCTGGCATGTGCCAGGCAGTCGGAATCCCTTAG
GGAAGCAGCAAAGATGCTGTGTGGTGGCCGGTGCACCTGCTGGTGTGCTG
TGTGGGCGGCGCATTGATGTCTGCCTGGGGGAGTGCAGTCGCAGGCGACT
GCAACTCTGCGAAGGAAGCACACGCTGCAGCTCGTGTACCATGAGCTCAG
GTGAGCTGTCAACCACACATGGCGTTCCATTGCTGCTACTTAAACTATAG
CAGCAACCTGAGCACCAGCCTGTTTGTACAAGGTGCCTTGCAAGCCTCAC
AGATCGGTGCTGTCGCTCAGGTGGCGTGTCACCAAGCTCTGGCTAGAGCA
TGGCGCTACAGCACATTGCCTATGTGGTGGGGCAACCAAACTTCTTGAGA
CGTCTCACTACTGTTCGTCTATGGTGTGGTGAAATTGCTGCCCATGCAAT
GGACATGCAAGGCTTGCTGTGCTGGTTGCCACCTCGTTGTGCAAAAACTT
GGTAGACCAGCACAGGACGGCAGCCGGCCTTGAGCGGTGTATGTGGTGCA
TACGCAGTCGTGTGGTCTTGTGAGCTGTTGCTGAGGCCTGCCTTAGCTTC
TGACCATGACATACTGGTATGCCACACACAAGAAACTGCATCTACCCCTC
AAAATGGCAGCCATCACAGCAGCCTATGTGGTTGCCGTGCTGTGCATGTC
TGCCTGCTGGGCTGCAAAATGTTAGATACACGGTAATGAACCGTTTATCA
GCGTATCGAAGAGTTGAGAGCTGAGAATTTGACACGCAACAGGCCTATAC
CCGACACACAAGTTTCATTATGACTCTGCACATTGGTTGCCGCAATTGCA
ACTGGGACTGTCATGTTTGTACAATGGGAAACATACTTATGGGACAGAGG
AAGTATGACTTTGGCGGCGTAAAAGTCGGCAACCACTACGCCGCACAGGT
GAGCTAGTTGCAGCGTAAATAACCACACCCTGTCACCTAGAGCTTTACGA
TCTTGTGATTCGTCTCAGTAGTTGTTTCCCGGAAGATGTGTTGCGCAAGT
GCGAGTTCTGACAAGGTGACAATTTGCGGTATACGAAGTTCGGCGGCGTC
AAAGTTGGGAACCACAACGCCGCAAAGGTGAGCTACTACTATTCGGTTCA
CAGTTCCCCACCACACTTTTCTGTTTTTTTTCGAAAAAACACATCCGCGC
GCGCGCCACTTTGAGCTGATACAGCTTGCGACGCAGGCGGACTTGATCAG
AGCCGTCTTAAATAATTCCATAGATGTGCTCGTGATCAGTCAGCCTACCA
GAGGGCTGCACAGCGCGTGTTGTTTGTGGTGACCTGTGCGCATTCCAGGT
GAAAAGTGCCTTCACAAAACGGGGAGAAGCTTATGTCCTGAACCATGCGC
TGCCGACGTGAGCGCTGCTAAGCAAAGTGGTAGCCTGCCAGTGTGAGATG
GGGACCATAGAAGCCGATTTTCAATTGGTGCTCATGGTCAAAAGTTATCA
CTGTCGTCGCCAGTACCTCCGTCTCTGTGCAGTACTAATTGTTCGAAAAT
GAGCGCGAGAAACAGCCCGAAACGACGCAAGAGGCCTATGCACAAACAAC
GATGCAGCAGAATGGAGATACCGCGCGATAGCGATGGAGCTGGCACATCT
CTACATCTGTGTCGTTAGGCTGAGACACAGCGGTGGCGTCTCTTAAATTT
GCGTGGAAATCCACCGAGTCGTTCGCAAACGACGACTGCTTGAAAAATGG
AGCGATTTTGAGTACAACGATGCAGAAGAATGGAAATACCGCGCGATAGG
GATGGTCCTGGCAGGCTCGCTGTATCTGTACAAGTAGTCTGACATGAGGC
GATTGCAGCTCACAAAGTTGCATTCAAAACCATCAAAGCGGCTGCTATTT
ACGGCTGCCTGAAAATCGAGGTCGGCAATTTTGAGCGCAAATTTCTAGTA
GAATGAAGATAGCACGCGATAGGCATGGAGCTGGTACGCTCACTGCATAT
GTGCTGATAGGGGTGCTACTTAGCAATTGCGTTGCGCCACTTTGCAGAGA
AATTCATGGCGGCGATCACAAGTTATGAATGCTTGAAAAGTGTGGTCGGG
AACTGTGAACCGAATAGTTGTAGTGCTTGCAGCGTAAACGTGTCCCGGAA
GTCGTGTTGCGCAAGTATGAGTTCTGAGCAGGTGACAGTTGCGTAATCAT
TTCGGCGGCATCAGAGTGCGGAACCCCTCTGCTGCCAACTTGAGCTGCGC
CTCGAACGTGTTTGGGCAAATCTGTGGAATATGTGGTCAAAACCTTACGC
AGGCAGGGCAGGGCACCCTGTTGCCGATGCGGAACAGCAAAGGAAGTAGA
GGCGCTGAATGCAGAATGAGAAGTAATCCTGTACATGGGATGCACAAACT
ATGCCGGCGCAAAAACTTTGCCAGAGGAGGGGGGCGCAACTAGGATCTAG
ATTTCGTATTTCAAGGTCAAGTTAGAACAAGGGGCAGGGCTGAACGCAAG
CGATCGTGGTCACTGTCTCAGGCTGCGCCGCTGCTCTTCTCACCCGCAGC
CGCCACCGCCGCAGATTACGGAGAAGCGCGATGTGCACTCGGAGAGGGCT
ACTGTAGGGTCAGGGCTAGGGGTCAACACAAGTGAGGGCGTCCATTCTGT
AAACCTGCACTGCTGCTCTCGCCCTCATCGCGCGCGTTTTTTGCATGCAG
ATCACGAAGGAGCGCGACGTGCACCTGGCGTGCACGCGTGGCGGCCTAGA
CAGCGCTGAGTTTACCAGAAGTCAGGGTCAGGGTCGGGACTGGGGTTAAA
ATGAGGTTCAGGGGTAGAGATAGGGCCGAAGTAGCGAGAGCGTCCACTTT
CTCGAGCTTCCACCTTCTCAGGCTGTGCTCCTGCTGTTCTCACCCGCTGC
CGCCCGTCGCCGCAGGTCACGAAGGAGTGCGACGTGCACCTCGTTTAGGG
CTTCTGAAAGGTTAGGGCTAGGAGGTAACACGTGAGGACATCCACTATCT
AAGGCCGCACCGCTGCTCTCGCTTTCGCCACGGTTCAACAAAAGTGAGGG
CATGCACTTTCTGAAGCTGCGCCGCTGCCCTCTCTTTCGCCGCGTCTCGC
AGATCACGAAGGAGCGCGACGTGCACCTGGCGTGCACGCGCGGCGGCCTC
TCCTGCACGCGCACCACGACCTACAGCTACGGCGCCGAGATGACCATGCT
GTCGAGCGACGAGGGCAACACGACGCTCGTCTTCGACTTCACGAGCGACG
CCCTCGGCCTCATGATCCTCGCGGAGCAGGACCCCGTCGACTGGCTCAAC
CTCGTGAGCAACGCGTACAGCTACCTCGGCTACTGCCTCGCGGCGTTCAC
GCTGCTGTTCGGCTTTGCGCGCACGGCGCGCCTGCGCGAGCTCGAGGAGG
CCAAGACGCTGCACATACTGAAGCAGCACCTCGCGGCGGTGGAGCGGCAG
CAGCGCATGCTTACGGAGTGCCATGCGCCCGTGGATACCGTGGTGGACGA
CGCGCGGCACAGCGCGGTGCAGCTGGTCTGA

Coding sequence (CDS) from alignment at Contig_56:241586..250566-

>mRNA_14091 ID=mRNA_14091|Name=jgi.p|Trimin1|350107|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1521bp|location=Sequence derived from alignment at Contig_56:241586..250566- (Tribonema minus UTEX_B_3156 )
ATGCACTACTTCCGGCGCCCGAAGGAGGCGCTCCACAGGCGCCGCAGCTA
CGTCGCCGACCGCGGCTTCCAAGACCACTACAGTGAGGGCCTCGCAGACG
GCCTGGGAGTGAGCTGGCCGCCCTCGGGCGTGTCGCGCAGATGGCACCGG
CACGCCAACGCGACCTTCGTGGCGCTCGTCATCGTCTTCGTCTGCGTCTG
TGTAACCGACTTTGTGCTCACCGTGCGCGCGCGCCTCTCGCCGCCCGTCA
GCCTGAGCCGAGACCCCGCTGCGACGCAGTTGAAGATGCCGTACTTCACC
GTGTGCCGCCCGCTGCTGCTGATTGGCAACGACGTGGCGGGCTGGGGGGA
TTGGCAGGGGATCCCCTACGCGACGAGCGTGGGGTGCCTGCGCACGGTGT
TGTACGGCGCTGATGGTGTTGAATCGGATGATGGAACGGTGCGCCACCGC
GTGAATTGCACCGCGACACACTGGCCCATCACCACGTCCAAGGGCGACGG
CTGCGAAGTCATCGGGATAGACCAAGCCATAGCCAGTGGGCAGAGCTACT
GGCCCATTACCACGTTCAAGGGGGACGGCTGCGAGGCCATTGGGATACAC
CAAGACATTGACGTAAACAAGGACCTGCGGTACGCGGTGGAGTTCATCAC
GCCCCGCGCAGGCATGGACATGCACATCGACGTGAACAAGGACCTGCGGT
ACGCAGTGGAGTTCATCACCCAGCCGCAAGACACGTTCAACTGGGCAAAC
TACTACGTCACGGACGAGGCGCCACCCGATGGTATCGACTGGAACACCAG
CGAGTTGCGGTATGATTTTGGCGGCGTCAAAGTCGGGAACCACTATGCCG
CGAAGTTGCGGTACGATTTCGGCGGCGTCAAAGTCGGGAACCACTACGCC
GCAAAGAGGAAGTATGACTTTGGCGGCGTAAAAGTCGGCAACCACTACGC
CGCACAGCCGCCACCGCCGCAGATTACGGAGAAGCGCGATGTGCACTCGG
AGAGGGCTACTATCACGAAGGAGCGCGACGTGCACCTGGCGTGCACGCGT
GGCGGCCTAGACAGCGCTGAGTTTACCAGAAGTCACGAAGGAATCACGAA
GGAGCGCGACGTGCACCTGGCGTGCACGCGCGGCGGCCTCTCCTGCACGC
GCACCACGACCTACAGCTACGGCGCCGAGATGACCATGCTGTCGAGCGAC
GAGGGCAACACGACGCTCGTCTTCGACTTCACGAGCGACGCCCTCGGCCT
CATGATCCTCGCGGAGCAGGACCCCGTCGACTGGCTCAACCTCGTGAGCA
ACGCGTACAGCTACCTCGGCTACTGCCTCGCGGCGTTCACGCTGCTGTTC
GGCTTTGCGCGCACGGCGCGCCTGCGCGAGCTCGAGGAGGCCAAGACGCT
GCACATACTGAAGCAGCACCTCGCGGCGGTGGAGCGGCAGCAGCGCATGC
TTACGGAGTGCCATGCGCCCGTGGATACCGTGGTGGACGACGCGCGGCAC
AGCGCGGTGCAGCTGGTCTGA