mRNA_14013 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352812
Unique NamemRNA_14013
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835ZDC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDC0_9STRA)

HSP 1 Score: 531 bits (1367), Expect = 1.250e-187
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
Query:    1 MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF 867
            MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF
Sbjct:    1 MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF 289          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2EGA5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGA5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.270e-17
Identity = 83/270 (30.74%), Postives = 126/270 (46.67%), Query Frame = 1
Query:   61 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRC-APLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 861
            TS LI  +AV  +K  +  +   V C+V  ++ D+L  G V    + GR W+SPLGLTCR+I+A+V T  +D   ++ RR+L L  PA G AMI  ++ADF   + HP ++  AP          F   D  IDAA   +T  G   G   R QL+R +G G  A+ ++             P   V                Q+   + A  E  L + +  +F  +  +LDG  L + DM   + ++   V L L++V+ + P  G A
Sbjct:   58 TSTLISQLAVVALKRRLAQQT-AVNCNVSGSSSDLLMRGEVGPVTVAGRRWRSPLGLTCRAIEAKVQTCQLDMGAVISRRKLILTVPAKGDAMIAMDDADFMGFITHPLMKPPAPPSTINAELITFVSEDVEIDAATGAITFYGLYMGERWRCQLKRGSGNGKGASIIVTHA----------PSRGV--------------QSQKDNNKFALMEPELTSTMTDFFNEMVFELDGTFLSFRDMMVTQRSEVPIVMLSLDIVVKKFPSPGLA 302          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2HM10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HM10_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.740e-14
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   61 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRC-APLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRR 522
            TS LI  +A+  +K+ + ++   V C+V  ++ D+L  G+V    + GR WQSPLGLTCR+I+A V    +D   ++ RR+L L  PA G AMI  N+ADF + + HP ++  +P       A  F      +DA   TVT  G       R +LRR
Sbjct:   46 TSTLISQLAIVALKLRLADQA-AVKCNVNGSSTDLLMRGSVGPVTVSGRKWQSPLGLTCRAIEATVQNCQLDMGAIVSRRKLVLNVPAEGDAMIAMNDADFGSFITHPLMKPPSPPSNANAEAIKFLNEGVKVDAETGTVTFYGLYMNERWRCELRR 201          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S1HGK6_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGK6_HEMAN)

HSP 1 Score: 80.1 bits (196), Expect = 1.260e-13
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1
Query:  127 TVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRR-QLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGG 408
            TV  SV S + ++L G V G  + G NW+SP GLTCR + A+VG   +D + LL++ ++ L+RPALG+  + F+  DF N L HP +  A +  G
Sbjct:   12 TVGVSVDSPSEELLQGQVRGVEVLGTNWESPRGLTCRDLMAKVGETGIDTEALLKKGRIDLSRPALGSCEVVFDSQDFANFLAHPRISKASIPAG 106          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2UAU9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAU9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.230e-13
Identity = 50/147 (34.01%), Postives = 79/147 (53.74%), Query Frame = 1
Query:   61 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLA-GTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMAGTLDG 495
            TS LI  +A+  +++ ++ ++  V C+VQ  + D+L  G V    + G+ W SPLGLTCR+I+A VG   +D   ++ +R+LRL  PA G AMI     DF N + HP ++   + G   +   F +    +D    +V   GT  G
Sbjct:  126 TSSLISQLAIVALQLRLK-QNSGVECNVQGKSADLLLKGKVGPVTVRGKGWGSPLGLTCRAIEATVGQCDLDLGSIVSKRKLRLTVPAKGEAMIALTAEDFGNFITHPLMKAPAVPGSAEKGVQFCKEGVVVDPETGSVIFMGTTHG 271          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S2EIJ9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIJ9_TRICV)

HSP 1 Score: 78.6 bits (192), Expect = 2.060e-12
Identity = 83/270 (30.74%), Postives = 117/270 (43.33%), Query Frame = 1
Query:   61 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDM-LAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLL-RRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAA-ARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 861
            TS LI  +AV  +K+ +  +   V C V   A D+ L G V    + GR W+SPLGLTCR+I+A V    +D   ++ RR+L L  PALG AMI  N ADF N + HP +R   L         F +    IDA     VT      G   +  L RD                 A + A+  V+ V             P++ ++          L   ++ YF  LT++LDG  L Y DM         +V L L++ + + P  G A
Sbjct:  101 TSSLISQLAVVALKLRLAAQSG-VKCDVTGAASDLILKGEVGPVTVRGRGWESPLGLTCRAIEATVRKCHLDMGSVVSRRKLVLTTPALGDAMIAMNGADFANFITHPLMRPPSLLA---EPLQFIKEGVVIDAGDGGAVTFFARHKGKQYKCFLMRDTSR-------------TATTTAK--VDVV-------------PVESEEAGDIEQISIELGEVLSDYFNQLTVELDGTFLSYRDMMVTAKGGSPSVMLALSIRVKKFPSPGLA 338          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835W822_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W822_CHLIN)

HSP 1 Score: 78.6 bits (192), Expect = 2.740e-12
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 1
Query:  112 RNRDH-TVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFAR 435
            R R H  V   VQ+N  DMLAG V+GAA+ GR W+SPLGLT R +D  VG + +D    L++Q + L    LG A + F+  DF   L HP VR A      G  F F R
Sbjct:   17 RLRSHGRVAVRVQANGWDMLAGRVDGAAVEGRMWESPLGLTARILDVEVGRVELDLAAALQQQRIALRNVPLGAARVVFSGPDFGAFLQHPLVRAAAARAVQGLPFTFDR 126          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A448Z6R5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6R5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.840e-12
Identity = 73/269 (27.14%), Postives = 125/269 (46.47%), Query Frame = 1
Query:   61 TSRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVR--CAPLGGGGGRA-FHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVG 855
            TS LI ++A   +K  + ++ H V C + + + ++L G V    + GR WQSPLGLTCR+I+A V   T+D   ++  Q L L  PA G AM+  +  DF N + HP ++    P+      +   F + + +I+ +   +   GT  G+  + +L+R+   GA  A++    L  +     R V+  A                         E++LA   +++F  +  +LDG  L + DM      +E +V L L + + + P  G
Sbjct:   67 TSTLISTLACMALKKRLVDQTH-VSCDLTAESNNLLFGRVGPVTVRGRGWQSPLGLTCRAIEATVNECTLDMGRVVTNQKLVLTTPAEGQAMVALSATDFGNFITHPLMKPPSPPVNSDRSNSRLVFQKENVSINPSTGLIIFYGTYAGSEWKFELQRNT-RGAEKAKI-DATLVESRGTDERDVDVDAM------------------------EKSLALTTSKFFNDMVFELDGTFLSFEDMMLTDKGRESSVMLSLRIKVKKFPSPG 308          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A835WZN9_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WZN9_9CHLO)

HSP 1 Score: 75.9 bits (185), Expect = 1.900e-11
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   73 IESVAVTIVKMLMRNRDHTVYCSVQSNAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQ-LRLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAIDAAARTVTMA 480
            +E+VA   ++  +R+    V   + +N  DMLAG VEGAA+ GR W+SPLGLT R +D  VG + +D    L++Q + L    LG A + F+  DF   L HP VR A      G  F F R    +  +A T T A
Sbjct:    6 VEAVAAAALRARLRSHGR-VSVRLAANGWDMLAGRVEGAAVEGRLWESPLGLTARILDVEVGRVELDLGAALQQQRIVLRNTPLGAARVVFSGPDFGAFLQHPLVRAAAARAVQGLPFSFDREVLVLPPSAGTGTGA 141          
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Match: A0A7S0GM09_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GM09_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.060e-10
Identity = 75/269 (27.88%), Postives = 118/269 (43.87%), Query Frame = 1
Query:   64 SRLIESVAVTIVKMLMRNRDHTVYCSVQSNAMDM-LAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVD-PQGLLRRQLRLARPALGTAMIEFNEADFENLLVHPAVRCAPLG-GGGGRAFHFARGDCAIDAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRPVEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLDGVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKA 861
            S +I  +AV  +K  + +  H V C V ++   + L G V    + G+ W+SPLGLTCR+I+A V   ++D  + L +R+LRL  PA G AM+    ADF + + HP ++   L   G    F F +    ID  A  V   G   G   R  L+R+  +G    +V              P+  ++               +       A  +AL   +  +F  LT +LDG  L + DM      +E  V + L +++ + P  G A
Sbjct:   72 SNIIPQLAVFALKRRLADEAH-VACDVTADPTRIALQGKVGPVTVKGKGWKSPLGLTCRAIEATVNECSLDFVEVLQKRKLRLTVPAEGNAMVALTGADFGSFVTHPLLKPPRLTMNGRSHPFQFLKDGVLIDPNAGEVRFFGMFQGERWRCILKRNR-DGKAEIKVF-------------PINNISS-----------VDDEDNVANKLAISKALTKIITIFFNNLTFELDGTFLSFQDMMVTDRGRESCVMISLKILVKKFPSTGIA 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352812 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835ZDC0_9STRA1.250e-187100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EGA5_9STRA1.270e-1730.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HM10_9STRA3.740e-1436.94Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1HGK6_HEMAN1.260e-1342.11Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S2UAU9_9STRA4.230e-1334.01Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2EIJ9_TRICV2.060e-1230.74Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A835W822_CHLIN2.740e-1244.55Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A448Z6R5_9STRA2.840e-1227.14Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A835WZN9_9CHLO1.900e-1138.69Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A7S0GM09_9STRA1.060e-1027.88Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_133contigContig_133:19696..21853 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352812|estExt_Genemark1.C_Ctg_1330002
Max annot lvl2759|Eukaryota
EggNOG OGs2E7A0@1|root,2SDWV@2759|Eukaryota
Evalue4.76e-22
Seed ortholog2880.D7FWQ0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_001480.1
TranscriptId353134
TrackFilteredModels1
ProteinId352812
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352812gene_14013Tribonema minus UTEX_B_3156 geneContig_133 19696..21853 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14013_1exon_14013_1Tribonema minus UTEX_B_3156 exonContig_133 19696..19755 +
exon_14013_2exon_14013_2Tribonema minus UTEX_B_3156 exonContig_133 20111..20190 +
exon_14013_3exon_14013_3Tribonema minus UTEX_B_3156 exonContig_133 20743..21853 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14013CDS_14013Tribonema minus UTEX_B_3156 CDSContig_133 19696..19755 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14013UTR3_14013Tribonema minus UTEX_B_3156 three_prime_UTRContig_133 21473..21853 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352812Trimin1|352812|estExt_Genemark1.C_Ctg_1330002Tribonema minus UTEX_B_3156 polypeptideContig_133 19696..21472 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14013 ID=mRNA_14013|Name=jgi.p|Trimin1|352812|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1251bp|location=Sequence derived from alignment at Contig_133:19696..21853+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGCTGATGCCCACCAGAGATCCAACAGCCTTGACGGGAATGGT
CATCGTGCAGACGAGCCGGCTCATCGAGAGCGTCGCGGTCACCATTGTCA
AGATGCTGATGAGAAACAGAGATCATACAGTGTACTGCAGCGTGCAGAGC
AACGCCATGGACATGCTCGCCGGCACAGTCGAGGGCGCCGCAATCGGTGG
CCGCAACTGGCAGAGCCCCCTGGGGCTCACGTGTCGCTCCATAGACGCGC
GCGTGGGGACGCTTACCGTGGACCCGCAGGGCCTGCTGCGGCGACAGTTA
CGCCTGGCGCGGCCCGCTCTGGGGACGGCGATGATAGAGTTCAACGAGGC
CGATTTTGAGAACCTGCTGGTGCACCCAGCCGTGAGGTGCGCGCCGCTGG
GCGGCGGCGGCGGCCGGGCGTTTCACTTTGCGCGCGGCGACTGCGCGATC
GACGCCGCGGCGCGCACCGTAACGATGGCGGGCACGCTCGACGGGGCGCA
CGCGCGCGTGCAGCTGAGGCGCGACGCGGGGGAGGGGGCGCTGGCGGCGC
GCGTGCTGCGGCAGGAGCTCGCGGCGGCCGCCTCGCCTGCGCGCCGGCCC
GTGGAGGCGGTCGCGCAGCGGCGGCAGCGCGCGCAGCAGCGGGGCGAGCG
GCCGCTGCAGCAGCAGCAGGGGGAGCAGGCGGCGGCCGCGGAAAGGGCGC
TCGCGGCAGGCGTCGCGCGCTACTTCCAGGGCCTGACGATAGACCTGGAC
GGCGTGAGCCTGCGCTACGCCGACATGGAGTTCGGGCGCGACGCGCAGGA
GGACACGGTGAAGTTGAAGTTGAACGTGGTGATAGACAGGGCGCCCGACG
TCGGCAAGGCGCGCTTCTGAGCGGCCGTGAAGCTGAGGCGCATGGGGTCG
GGTCCAGTGTTCCGTGCTCGGCATGCACTACTGTATGTCTGCTGAAAGCG
CTCGACCCAGTGCAACGCCGCATAGGTGCGCCCCCTGCGCCTGCTGTATG
TACATGTGCGTGCGTGTCGGACGCGGCTCAGAGGTTTTGACTGGCTTTTT
GCTTCATGGTCAGTGGCAATGTCGTGCGTTCATGGTACCTCGGGCCACAC
ACATTTTGCTTCACATCGGTGTCATGCATGCATACATGTACGCTCACATC
CATCTGTACGGTTCAGCGGCTGGTTGCGCAGCGCTGCATCGTATGTGACT
TAACAGCGACAGTTCTCTCCCCAAATACACATTACAGCCCTGACCACCGG
C
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protein sequence of jgi.p|Trimin1|352812

>Trimin1|352812|estExt_Genemark1.C_Ctg_1330002 ID=Trimin1|352812|estExt_Genemark1.C_Ctg_1330002|Name=jgi.p|Trimin1|352812|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MAELMPTRDPTALTGMVIVQTSRLIESVAVTIVKMLMRNRDHTVYCSVQS
NAMDMLAGTVEGAAIGGRNWQSPLGLTCRSIDARVGTLTVDPQGLLRRQL
RLARPALGTAMIEFNEADFENLLVHPAVRCAPLGGGGGRAFHFARGDCAI
DAAARTVTMAGTLDGAHARVQLRRDAGEGALAARVLRQELAAAASPARRP
VEAVAQRRQRAQQRGERPLQQQQGEQAAAAERALAAGVARYFQGLTIDLD
GVSLRYADMEFGRDAQEDTVKLKLNVVIDRAPDVGKARF*
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mRNA from alignment at Contig_133:19696..21853+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14013 ID=mRNA_14013|Name=jgi.p|Trimin1|352812|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2158bp|location=Sequence derived from alignment at Contig_133:19696..21853+ (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCTGATGCCCACCAGAGATCCAACAGCCTTGACGGGAATGGT CATCGTGCAGGTACCGTTGTTGTAGACGTGCTGTGTGAAGTGTGAGTGTG AACAAATGGATTTTTTTATTTTTTCTATTTGAGCCCCTTACGCCGCTCGA AACTCAACTGTCGCTGGACGCCGACAGTAGGGCCACGCTCTTCTGACGAT CACAGAAACTGGCGCGACCCGATCCGTCTTGCGCTGTCGCCACTGCTGCT GCGCGACGAGCACACCTACCATCGTGTGCAAAACATCACACGCGAAGCAC TCGCGCAGGACATCACACGCAAGCTTCGAACATTCGTACGCAGATGATCG TCAGACGAGGTACTGCTACGGCGGTGCTTGTGCTATGCCTCGGGCCGTGC ACGGCGTTCCTGCAGACGAGCCGGCTCATCGAGAGCGTCGCGGTCACCAT TGTCAAGATGCTGATGAGAAACAGAGATCATACAGTGTACTGCAGGTGAG AGAACTTCAGGAAGGTCGTCGGTTTCATGTGACCAATTTCGGTTAGCTGC AGGGAAATGCTGACCTTCAGCTCGAGAAGTTCAGTGTTAGACTTATAGTT CAGAACTGGTGCACCACCATTGTTGACTTGCAACCTGCGCATGCCGTGTC TGGTGCGAGTGTTCGACTTCAGAACGACAGCACCTATGAAGTCCATCGTG AGCTGCAGCACTTGCACACACTTGTGTTCAGAGGCAAATAGGACTGAATC CTAGCTGTCTACGCAAATGCTCTCATAACTGTGCGATTATGAACCTCAAG CCTCACAATCAACTGTCAGTGCATAGTTCATGTATCTGAAGTGGTCGGGC CGCCACATCACCATGCGATGCCCCCATTCCATCACGACTTTCAAAACCAT GTTTAGACAGACAAGTTGCACACAAAATTCCATGTTGCAGCTGCGCCCTG CTGCACTGCTTTGCGCAGCAAGCAATGGCTGACGCAGCGCAGCATTCCAG CCCGTTCCCATCGTCTCTGCTGCCTTCGTCCGCATGCGCTCACGCAGCGT GCAGAGCAACGCCATGGACATGCTCGCCGGCACAGTCGAGGGCGCCGCAA TCGGTGGCCGCAACTGGCAGAGCCCCCTGGGGCTCACGTGTCGCTCCATA GACGCGCGCGTGGGGACGCTTACCGTGGACCCGCAGGGCCTGCTGCGGCG ACAGTTACGCCTGGCGCGGCCCGCTCTGGGGACGGCGATGATAGAGTTCA ACGAGGCCGATTTTGAGAACCTGCTGGTGCACCCAGCCGTGAGGTGCGCG CCGCTGGGCGGCGGCGGCGGCCGGGCGTTTCACTTTGCGCGCGGCGACTG CGCGATCGACGCCGCGGCGCGCACCGTAACGATGGCGGGCACGCTCGACG GGGCGCACGCGCGCGTGCAGCTGAGGCGCGACGCGGGGGAGGGGGCGCTG GCGGCGCGCGTGCTGCGGCAGGAGCTCGCGGCGGCCGCCTCGCCTGCGCG CCGGCCCGTGGAGGCGGTCGCGCAGCGGCGGCAGCGCGCGCAGCAGCGGG GCGAGCGGCCGCTGCAGCAGCAGCAGGGGGAGCAGGCGGCGGCCGCGGAA AGGGCGCTCGCGGCAGGCGTCGCGCGCTACTTCCAGGGCCTGACGATAGA CCTGGACGGCGTGAGCCTGCGCTACGCCGACATGGAGTTCGGGCGCGACG CGCAGGAGGACACGGTGAAGTTGAAGTTGAACGTGGTGATAGACAGGGCG CCCGACGTCGGCAAGGCGCGCTTCTGAGCGGCCGTGAAGCTGAGGCGCAT GGGGTCGGGTCCAGTGTTCCGTGCTCGGCATGCACTACTGTATGTCTGCT GAAAGCGCTCGACCCAGTGCAACGCCGCATAGGTGCGCCCCCTGCGCCTG CTGTATGTACATGTGCGTGCGTGTCGGACGCGGCTCAGAGGTTTTGACTG GCTTTTTGCTTCATGGTCAGTGGCAATGTCGTGCGTTCATGGTACCTCGG GCCACACACATTTTGCTTCACATCGGTGTCATGCATGCATACATGTACGC TCACATCCATCTGTACGGTTCAGCGGCTGGTTGCGCAGCGCTGCATCGTA TGTGACTTAACAGCGACAGTTCTCTCCCCAAATACACATTACAGCCCTGA CCACCGGC
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Coding sequence (CDS) from alignment at Contig_133:19696..21853+

>mRNA_14013 ID=mRNA_14013|Name=jgi.p|Trimin1|352812|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=870bp|location=Sequence derived from alignment at Contig_133:19696..21853+ (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCTGATGCCCACCAGAGATCCAACAGCCTTGACGGGAATGGT
CATCGTGCAGACGAGCCGGCTCATCGAGAGCGTCGCGGTCACCATTGTCA
AGATGCTGATGAGAAACAGAGATCATACAGTGTACTGCAGCGTGCAGAGC
AACGCCATGGACATGCTCGCCGGCACAGTCGAGGGCGCCGCAATCGGTGG
CCGCAACTGGCAGAGCCCCCTGGGGCTCACGTGTCGCTCCATAGACGCGC
GCGTGGGGACGCTTACCGTGGACCCGCAGGGCCTGCTGCGGCGACAGTTA
CGCCTGGCGCGGCCCGCTCTGGGGACGGCGATGATAGAGTTCAACGAGGC
CGATTTTGAGAACCTGCTGGTGCACCCAGCCGTGAGGTGCGCGCCGCTGG
GCGGCGGCGGCGGCCGGGCGTTTCACTTTGCGCGCGGCGACTGCGCGATC
GACGCCGCGGCGCGCACCGTAACGATGGCGGGCACGCTCGACGGGGCGCA
CGCGCGCGTGCAGCTGAGGCGCGACGCGGGGGAGGGGGCGCTGGCGGCGC
GCGTGCTGCGGCAGGAGCTCGCGGCGGCCGCCTCGCCTGCGCGCCGGCCC
GTGGAGGCGGTCGCGCAGCGGCGGCAGCGCGCGCAGCAGCGGGGCGAGCG
GCCGCTGCAGCAGCAGCAGGGGGAGCAGGCGGCGGCCGCGGAAAGGGCGC
TCGCGGCAGGCGTCGCGCGCTACTTCCAGGGCCTGACGATAGACCTGGAC
GGCGTGAGCCTGCGCTACGCCGACATGGAGTTCGGGCGCGACGCGCAGGA
GGACACGGTGAAGTTGAAGTTGAACGTGGTGATAGACAGGGCGCCCGACG
TCGGCAAGGCGCGCTTCTGA
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