mRNA_13956 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|176575
Unique NamemRNA_13956
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A835Z8Q8_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q8_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 6.550e-164
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
Query:    1 MRWIGGSVVALSLASCCQGFVPAAVPAGRLCAAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            MRWIGGSVVALSLASCCQGFVPAAVPAGRLCAAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED
Sbjct:    1 MRWIGGSVVALSLASCCQGFVPAAVPAGRLCAAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 215          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A6H5L1Z1_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Z1_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.540e-69
Identity = 119/221 (53.85%), Postives = 149/221 (67.42%), Query Frame = 1
Query:    1 MRWIGGSVVALSLASCCQGFVPAAVPAGRLC---AAAAGPNTAARQKHPRHTCRMAYDVRYSPNSWPNQP-LEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGK--VKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            MR   G++V L +A   + F+ A    G +C   AAA    T+A          MAYDV+YSPN W ++  + PG GGIWPGDP+A+TH        VT  NKAGE VA  DVP DRYI+FA ED G D+P+ N +RMCRNGCCTTCA+ V EGK  VK EG LGLLK+LR++G+ LTCCSY  +D+ +QLQ+ED+VY+KQ+G  FE GGVEWGGF  +ED
Sbjct:   28 MRARAGALVWLLMAVQSRAFLVAPAVGGGVCRPRAAAGAARTSAASP------LMAYDVKYSPNKWWDEDDIVPGFGGIWPGDPDAETH-------HVTYVNKAGEEVASADVPVDRYIFFATEDAGVDVPIINKKRMCRNGCCTTCAVKVLEGKARVKQEGALGLLKNLRQEGYALTCCSYPKSDLVVQLQEEDDVYMKQFGNDFEGGGVEWGGFFLDED 235          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A4D9CSH6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH6_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.460e-69
Identity = 102/178 (57.30%), Postives = 129/178 (72.47%), Query Frame = 1
Query:  118 AARQKHPRHTCRMAYDVRYSPNSWPN--QPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            AA    P     +   ++ SPN W    QPLEPGVGGIWPG P+A+ +K       VT+ +   +    MDVP+DRYI+FAFED G DLP+ NG+RMCRNGCCTTCA+ ++EGKVKME  LGLL+D++  G+ L+CCS   +D+  +LQDEDEVY++QWGETFESGGVEWGGFLPE+D
Sbjct:   47 AALHASPPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYK-------VTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVYVRQWGETFESGGVEWGGFLPEDD 217          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A7S2V5A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.820e-65
Identity = 103/181 (56.91%), Postives = 127/181 (70.17%), Query Frame = 1
Query:  109 PNTAARQKHPRHTCRMAYDVRYSPNSWPNQ-PLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKN-KAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            P++      PR   + AYD R SPN W    P+EPG GG WPGDPNA T         V ++N   GE V +MDVP DRYIYFAFED G +LPL N  R CRNGCCTTCA+  +EGK+KM+  LGLLK++++ G+ L CCSY  +D+ +++Q EDEVY KQWG+TFESGGVEWGGFLPE+D
Sbjct:   84 PSSKQESSTPRVPIKSAYDWRTSPNKWGRGIPIEPGFGGPWPGDPNAPT-------FNVKVRNVDTGEEV-EMDVPADRYIYFAFEDAGIELPLINKERACRNGCCTTCAVKTKEGKMKMDPQLGLLKEMKKQGYGLLCCSYPRSDLVVEVQKEDEVYRKQWGDTFESGGVEWGGFLPEDD 256          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A7S3YL42_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL42_HETAK)

HSP 1 Score: 192 bits (489), Expect = 1.550e-58
Identity = 94/168 (55.95%), Postives = 118/168 (70.24%), Query Frame = 1
Query:  160 YDVRYSPNSWP--NQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKN-KAGEVVAQMDVPDDRYIYFAFEDEGHDLPL---QNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            YD R SPN W   ++P EPG GG WPGDPNA   K       VT+KN   G  V  M VP DRYI+F FE++   +P+   Q G RMCRNGCCTTCA+ V EGKVK +  +GL+K+LR++G+ L CC+Y  +D+ L++  EDE Y+KQWGE+FESGGVEWGGFLPE+D
Sbjct:   61 YDWRRSPNKWTVTDKPAEPGFGGPWPGDPNAPKFK-------VTVKNVDEGTEVTHM-VPIDRYIFFQFEEDDIPVPIISGQRGERMCRNGCCTTCAVKVVEGKVKQDAQIGLMKELRKEGYALMCCAYPRSDLVLEVTAEDECYIKQWGESFESGGVEWGGFLPEDD 220          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A482T133_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T133_9ARCH)

HSP 1 Score: 189 bits (481), Expect = 1.390e-57
Identity = 88/149 (59.06%), Postives = 109/149 (73.15%), Query Frame = 1
Query:  202 LEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNK-AGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
             +PGVGGIWPGDP+A+ +       QVT+K+K  GE   QM VP+DRYIYF FE++G +LP+ N  RMCR GCCT C + V EGKVKM+  LGLLK+ R DG+ L+CC+Y  +DV  +LQDEDE+Y+KQW E FE GGV WGG LPE D
Sbjct:   61 FKPGVGGIWPGDPSAKKY-------QVTVKSKKTGEEFVQM-VPEDRYIYFYFEEQGVELPIHNKARMCRQGCCTICTVKVSEGKVKMDAPLGLLKEFRNDGYALSCCAYPKSDVVCELQDEDEMYIKQWAEGFEGGGVIWGGVLPEHD 201          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: W7TUL4_9STRA (Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUL4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.110e-50
Identity = 82/155 (52.90%), Postives = 106/155 (68.39%), Query Frame = 1
Query:  118 AARQKHPRHTCRMAYDVRYSPNSWPN--QPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVY 576
            AA    P     +   ++ SPN W    QPLEPGVGGIWPG P+A+ +K       VT+ +   +    MDVP+DRYI+FAFED G DLP+ NG+RMCRNGCCTTCA+ ++EGKVKME  LGLL+D++  G+ L+CCS   +D+  +LQDEDEVY
Sbjct:   47 AALHASPPKRLTVTEQLQLSPNRWKRNGQPLEPGVGGIWPGKPDAKKYK-------VTVVDPRTKTNYTMDVPEDRYIFFAFEDSGVDLPMVNGKRMCRNGCCTTCAVKMKEGKVKMEAALGLLRDMKNKGYALSCCSLPRSDIVCELQDEDEVY 194          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A0G4HZN2_9ALVE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZN2_9ALVE)

HSP 1 Score: 157 bits (396), Expect = 4.080e-44
Identity = 74/162 (45.68%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  160 YDVRYSPNSWPNQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            +D+  SP  W  Q L P  GG +PGDP+A+ +          I +K GE  + +DV +DRYI+FAFE+ G  LP++N ++MCRNGCCTTC + ++EG V+M+  +GL+K++ ++G+ L+C S   +DV  + QDEDEVY+KQW E+FE G V++G  +P ED
Sbjct:   98 FDLNKSPMRWQGQTLVPPKGGAFPGDPDAKKYNV------TLIDSKTGESYS-LDVAEDRYIFFAFEEAGIKLPIRNIKKMCRNGCCTTCTVRMREGDVEMDPQIGLVKEMTKNGYRLSCVSMPRSDVVAEFQDEDEVYVKQWAESFEKGKVDFG--IPIED 250          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A0G4ELQ0_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELQ0_VITBC)

HSP 1 Score: 152 bits (383), Expect = 8.740e-42
Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 1
Query:  163 DVRYSPNSWP-NQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            D   +P  W     ++P  GG WPGDPNA+T+K       VTI +         DVP+DRYI+F+FE+  +  P++N ++MCRNGCCTTCA+ V+EG+VKM+  +GL +++ R G+ LTC SY  +DV L+LQDEDEVY KQ+G+TF+S        +P ED
Sbjct:  129 DADDTPMKWEMGDRIKPYKGGPWPGDPNAKTYK-------VTIIDPVSGERHTQDVPEDRYIFFSFEESRNLPPIKNIKKMCRNGCCTTCAVRVREGEVKMDPQIGLTREMERAGYALTCVSYPRSDVVLELQDEDEVYKKQFGDTFDSMSKNPTWEIPIED 283          
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Match: A0A2V3IXT2_9FLOR (Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXT2_9FLOR)

HSP 1 Score: 144 bits (364), Expect = 3.170e-40
Identity = 75/160 (46.88%), Postives = 99/160 (61.88%), Query Frame = 1
Query:  184 SWPNQPLEPGV------GGIWPGDPNAQTHKAMRLPLQVTIKNKAGEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEGKVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETFESGGVEWGGFLPEED 645
            S P  PL P         G +P  P A+T+       QV I++    +V    VP+DRYI+ +  D+G DLP       CRNGCCTTCA+ +  G+V+ E  LGLLKD+R  G+ L C SYA +D+   LQ +DEVY+KQ+G +FESGGVEWGGF+PE+D
Sbjct:   30 SSPLTPLNPSETRIKKRDGSFPSRPGAKTY-------QVKIEDPRKGIVHTYTVPEDRYIWHSITDQGADLPAS-----CRNGCCTTCAVKMSTGEVQQEEALGLLKDMRAKGYALLCVSYARSDIDCVLQGKDEVYVKQFGSSFESGGVEWGGFVPEDD 177          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176575 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8Q8_9STRA6.550e-164100.00Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A6H5L1Z1_9PHAE1.540e-6953.852Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9CSH6_9STRA2.460e-6957.302Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2V5A4_9STRA1.820e-6556.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3YL42_HETAK1.550e-5855.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482T133_9ARCH1.390e-5759.062Fe-2S iron-sulfur cluster binding domain-containi... [more]
W7TUL4_9STRA2.110e-5052.90Ferredoxin (2fe-2s) n=1 Tax=Nannochloropsis gadita... [more]
A0A0G4HZN2_9ALVE4.080e-4445.682Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4ELQ0_VITBC8.740e-4246.912Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2V3IXT2_9FLOR3.170e-4046.88Ferredoxin-2 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_138contigContig_138:21789..24047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|176575|e_gw1.138.70.1
BRITEko00000,ko00001,ko00194
KEGG Pathwayko00195,map00195
KEGG koko:K02639
Preferred namePETF2
Description2Fe-2S iron-sulfur cluster binding domain
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0633@1|root,2RXRY@2759|Eukaryota
Evalue1.45e-71
Seed ortholog2880.D7G7R1
Hectar predicted targeting categorysignal peptide
Ec32 ortholog description2Fe-2S ferredoxin-type domain
Ec32 orthologEc-06_000690.1
TranscriptId176897
TrackFilteredModels1
ProteinId176575
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176575gene_13956Tribonema minus UTEX_B_3156 geneContig_138 21789..24047 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176575Trimin1|176575|e_gw1.138.70.1Tribonema minus UTEX_B_3156 polypeptideContig_138 21789..24047 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13956_3exon_13956_3Tribonema minus UTEX_B_3156 exonContig_138 21789..21983 -
exon_13956_2exon_13956_2Tribonema minus UTEX_B_3156 exonContig_138 22581..22771 -
exon_13956_1exon_13956_1Tribonema minus UTEX_B_3156 exonContig_138 23786..24047 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13956CDS_13956Tribonema minus UTEX_B_3156 CDSContig_138 23786..24047 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13956 ID=mRNA_13956|Name=jgi.p|Trimin1|176575|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=648bp|location=Sequence derived from alignment at Contig_138:21789..24047- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGTGGATAGGAGGCAGCGTCGTGGCGCTGTCGCTGGCGTCCTGCTG
CCAGGGCTTCGTGCCTGCAGCAGTACCAGCAGGCAGACTTTGTGCAGCAG
CTGCGGGCCCGAACACCGCAGCTCGACAAAAGCATCCGCGGCACACATGC
AGGATGGCTTACGATGTGCGATACTCACCCAACTCGTGGCCTAACCAGCC
TCTGGAGCCCGGTGTCGGAGGTATATGGCCTGGAGATCCGAACGCACAGA
CGCACAAGGCAATGCGCCTGCCGCTGCAGGTCACGATCAAGAACAAGGCC
GGCGAGGTGGTGGCGCAGATGGACGTCCCGGATGACCGCTACATCTACTT
CGCATTTGAAGACGAAGGACACGATCTGCCGCTGCAGAACGGGCGGCGCA
TGTGCCGCAACGGCTGCTGCACGACGTGCGCCATGCACGTGCAGGAGGGG
AAGGTCAAGATGGAGGGCGGGCTGGGGCTGCTCAAGGACCTGCGGCGCGA
CGGCTGGACGCTCACGTGCTGTTCGTACGCGACGACGGATGTGACGCTAC
AGCTGCAGGACGAGGACGAGGTGTACCTCAAGCAGTGGGGGGAGACGTTC
GAGAGCGGGGGGGTCGAGTGGGGGGGGTTCCTGCCGGAGGAGGACTAG
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protein sequence of jgi.p|Trimin1|176575

>Trimin1|176575|e_gw1.138.70.1 ID=Trimin1|176575|e_gw1.138.70.1|Name=jgi.p|Trimin1|176575|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp
MRWIGGSVVALSLASCCQGFVPAAVPAGRLCAAAAGPNTAARQKHPRHTC
RMAYDVRYSPNSWPNQPLEPGVGGIWPGDPNAQTHKAMRLPLQVTIKNKA
GEVVAQMDVPDDRYIYFAFEDEGHDLPLQNGRRMCRNGCCTTCAMHVQEG
KVKMEGGLGLLKDLRRDGWTLTCCSYATTDVTLQLQDEDEVYLKQWGETF
ESGGVEWGGFLPEED*
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mRNA from alignment at Contig_138:21789..24047-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13956 ID=mRNA_13956|Name=jgi.p|Trimin1|176575|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2259bp|location=Sequence derived from alignment at Contig_138:21789..24047- (Tribonema minus UTEX_B_3156 )
ATGAGGTGGATAGGAGGCAGCGTCGTGGCGCTGTCGCTGGCGTCCTGCTG CCAGGGCTTCGTGCCTGCAGCAGTACCAGCAGGCAGACTTTGTGCAGCAG CTGCGGGCCCGAACACCGCAGCTCGACAAAAGCATCCGCGGCACACATGC AGGATGGCTTACGATGTGCGATACTCACCCAACTCGTGGCCTAACCAGCC TCTGGAGCCCGGTGTCGGAGGTATATGGCCTGGAGATCCGAACGCACAGA CGCACAAGGCAAGTTCAGCACACATCAGGATACGATGTACGAAATCACCG CACGGGATCCTACAACGGATTTTGAAGCAGTGGGTAGAGCATGTCGATAC AATAGGAACACATGCGTCAGCACTCGAGTCCGGTAGTGGTTTAGGCACCC GAACCCTGCTGTGGTGGCATTTGAGTGGTGACACAAGTGTGGCGAGACAC CGGCACTGAAAATCCGCTACTGAAGTGATAGGAGTTGCACTTGCTCAGCC CGTCGATTTGCTCACCGCACCATTTCCAGATGCCTTTGGATCCCAGATTG TTGTCGTGACTACCGCCTTTGGTGCATTATTAAATTGTGCATGGGCTGCT GATTACCTATGACAGCAGCGTTGCACGTGCTGTCGAAGTTGCGTCAATGC AACTTCAAATTTCTGTTTTGCGACACCGGGCCATGCTTGTCGTCCTGCAC GGTGAACGCAACGCAACAGTCACTATAATCCTATGGCAGCATGTGGTGGG CGGGGTACCATCAGTGAGATGCACCAATGAGTGTCATCCACTGCGAAGCC CGTCAATGGGGTGACTATGCCATCAGCCTCTTTTGGCCCCACCTTTCGGT AGCAGCAGCAGCGCCGGTGCCTCGAACCAGGCCTCATTATGTGTGTGAGC AGTGCAGAGCATGGCAGCACATCACAGGTGTGCTGATGCCCAGCACAGAA TAGGGTCACGCTAATACTTGCGCATACATGGATGATGCATAGTATGCACG CCAGCACGTTCACACGACGCATTCTACGCTGCGAGGGCGCTGGCTGCATG ATGCTGGTTTGTAAGCTGTCTTGCTCACGGTAATTGAAAACCAGATGCAA CACGACGCATACTGCGCTGCGAGGGCGCTGGCTGCATGATGCTGGTTTGT AAGCTGTCTTGCTCACGATAATTGAAAACCAGATGCAAGCAAATGGCACT GACAATGTAGAAGCTGTCGTTCTCACGACACTGAAAGATTTAAACCAGAG CTTTTAGAAGCAAACGGCACTGACAGTGCGCCTGCCGCTGCAGGTCACGA TCAAGAACAAGGCCGGCGAGGTGGTGGCGCAGATGGACGTCCCGGATGAC CGCTACATCTACTTCGCATTTGAAGACGAAGGACACGATCTGCCGCTGCA GAACGGGCGGCGCATGTGCCGCAACGGCTGCTGCACGACGTGCGCCATGC ACGTGCAGGAGGGGAAGGTGAGAAGACACAGCGGCGTACGTATGCGCGCG CCCATGTATGCGACGCGGCACATGAGCTACACAGGCCGTGACTGCGATGA TTTACAGCGCAGCGTCGCACACGCGAGTGCAGTACAGTGCCATGGCGCAG TCAATGTTGTATGGCGTGAGCTCAAACCCTGACCGTGCGTGCGGTTTTAC TCTCGCTGGACCACTAGCAGCCCATGCGGGAGAGTGTCGGTACACAGCCA GGAGTGCCAAATCAGGTTGCGTCGTGGCGGATCGATATTCGCCACTGTGC ATGCTGCGCAGACGCCTGATCTAACATGTAGAGTGACTGTCTTTCGCAGA TGCAGCTGCCTCACGAGTTGATGTCCCCGCTGAAGCTGAGGCATACCGGC GGTCGGTTCACAGTTACAGTTTGTGCACCGCCAAACCTCAACTTCTTCGA TACCGCATAATCAAATACCTTCAAGTACATGGCCTCAAGCTCATACCTCC ATGACACGCGTTACCGCCGCATCCCCACATTGTCACCTATGGCTTTATTA ATATCAAGCAAAATTGGGAGCAAATGAAGCGTTGAAAACGTGAGATTCGC TGCTCGCGGCGCAGGTCAAGATGGAGGGCGGGCTGGGGCTGCTCAAGGAC CTGCGGCGCGACGGCTGGACGCTCACGTGCTGTTCGTACGCGACGACGGA TGTGACGCTACAGCTGCAGGACGAGGACGAGGTGTACCTCAAGCAGTGGG GGGAGACGTTCGAGAGCGGGGGGGTCGAGTGGGGGGGGTTCCTGCCGGAG GAGGACTAG
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Coding sequence (CDS) from alignment at Contig_138:21789..24047-

>mRNA_13956 ID=mRNA_13956|Name=jgi.p|Trimin1|176575|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=648bp|location=Sequence derived from alignment at Contig_138:21789..24047- (Tribonema minus UTEX_B_3156 )
ATGAGGTGGATAGGAGGCAGCGTCGTGGCGCTGTCGCTGGCGTCCTGCTG
CCAGGGCTTCGTGCCTGCAGCAGTACCAGCAGGCAGACTTTGTGCAGCAG
CTGCGGGCCCGAACACCGCAGCTCGACAAAAGCATCCGCGGCACACATGC
AGGATGGCTTACGATGTGCGATACTCACCCAACTCGTGGCCTAACCAGCC
TCTGGAGCCCGGTGTCGGAGGTATATGGCCTGGAGATCCGAACGCACAGA
CGCACAAGGCAATGCGCCTGCCGCTGCAGGTCACGATCAAGAACAAGGCC
GGCGAGGTGGTGGCGCAGATGGACGTCCCGGATGACCGCTACATCTACTT
CGCATTTGAAGACGAAGGACACGATCTGCCGCTGCAGAACGGGCGGCGCA
TGTGCCGCAACGGCTGCTGCACGACGTGCGCCATGCACGTGCAGGAGGGG
AAGGTCAAGATGGAGGGCGGGCTGGGGCTGCTCAAGGACCTGCGGCGCGA
CGGCTGGACGCTCACGTGCTGTTCGTACGCGACGACGGATGTGACGCTAC
AGCTGCAGGACGAGGACGAGGTGTACCTCAAGCAGTGGGGGGAGACGTTC
GAGAGCGGGGGGGTCGAGTGGGGGGGGTTCCTGCCGGAGGAGGACTAG
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