mRNA_13941 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175213
Unique NamemRNA_13941
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A835ZD28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD28_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 1.290e-252
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1
Query:    1 MLNLSVALLYARPGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTYTQNVKAVTPQPDLMFKFFLQPVWGPPDLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSMYNENIKTSLSMDTQALNLSLTLALTLALNRS 987
            MLNLSVALLYARPGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTYTQNVKAVTPQPDLMFKFFLQPVWGPPDLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSMYNENIKTSLSMDTQALNLSLTLALTLALNRS
Sbjct:    1 MLNLSVALLYARPGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTYTQNVKAVTPQPDLMFKFFLQPVWGPPDLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSMYNENIKTSLSMDTQALNLSLTLALTLALNRS 329          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A835Z2T5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 8.690e-74
Identity = 121/264 (45.83%), Postives = 163/264 (61.74%), Query Frame = 1
Query:   37 PGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTYTQNVKAV----TPQPDLMFKFFLQPVWGPP--DLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYD 810
            PGV  GSC QV+C+P SI  G  FHT VRWCLQRPR  H   D +D +TK+ YG  G+TP G +QCGEHT+ Q + AV    T + ++++++F+ PVWG    D+   +P+PN IA  G+++QP +  LV+DC   P R+ N  PTG Q+GIDFP  P C+ PGEP+ + V THL +  AADL VNL IGTG DKYLG  DI+V ES  +G+  +  A          W+ H   FT + T ++      Y+ AF+VP G  +D
Sbjct:   55 PGVKPGSCFQVVCLPTSIAIGAPFHTRVRWCLQRPRRSHLVVDTLDVNTKEWYGGDGYTPEGEWQCGEHTFEQTMNAVPDPATGEYNVLWRYFVTPVWGDGRYDIREEEPYPNAIAATGIDRQPLYDGLVDDCGLRPDRLVNFPPTGVQDGIDFPYTPYCIQPGEPFFVAVFTHLLSAPAADLHVNLHIGTGPDKYLGPDDIFVAESVEFGIPRDVDAI---------WSRHLARFTGRATAMLVGYSTPYLTAFLVPAGSTFD 309          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A835ZES1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES1_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.410e-71
Identity = 132/323 (40.87%), Postives = 169/323 (52.32%), Query Frame = 1
Query:   37 PGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTY----TQNVKAVTPQPDLMFKFFLQPVWGPPDLNS--YDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYL--------------------------------------GAKDIYVGESNVYGVLSNPVATKW-SDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTL 870
            PGV  G C+Q+MCIP  +  G  FH T             S +++D  TK  Y  +G  P   YQCGEHT+      N KA T   D+M+K+F+ P WG  D N+  YDPFPN++AE G+NKQP +G L  DC PVP R WN+ PTG+Q+GIDF  +P C+  G+ W+I V  HLE+   ADLRVNLQIGTG D YL                                      G KDIYV ESN YG+L NP    W + LP  YWT++ ++F + Q  L + G  +YIAAF+VP    ++A            A GW  L
Sbjct:  291 PGVKVGGCMQIMCIPQQVGAGDVFHVT------------SSVNLLDMTTKQYYTGSGTQPNQPYQCGEHTFQATFNANYKAGTTTYDIMWKWFVTPFWGSLDANTQYYDPFPNMLAESGINKQPTYGPLQGDCVPVPDRWWNLPPTGEQDGIDFVTIPQCIVKGKAWTIEVKVHLESALTADLRVNLQIGTGGDMYLAHPHVPPTDARKPHVLPSLSSVYHQLTHATLRVTHRTAGDKDIYVTESNKYGILPNPAVVSWDAPLPANYWTTYQMDFDADQMNLFDNGARLYIAAFLVPHLAQFNAT----------IAGGWNVL 591          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A836CLJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.990e-66
Identity = 122/293 (41.64%), Postives = 172/293 (58.70%), Query Frame = 1
Query:   37 PGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGF-TPGGAYQCGEHTYTQNVKA-VTPQP--DLMFKFFLQPVWGPPDLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTR---VWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSM 894
            PGV  G+C+QVMC+P ++ PG  FH  VR+C+QRPR +H +F ++D+ TK+ YG  G        QCGE T+     A  TP    DLM+KFF+ P  G       D FPN+IAE G+++QP++ A ++  A  P +    WN+ PTG QNGI++  +P C  PG  W I+V+THLET+DAADL  NLQIG+GAD YLG  D ++ E  V  + +NP    W+ +P  YWT+  + FT+ +T LV  G  +Y++ FM P   V++               GWK L   F+ +M
Sbjct:  113 PGVKPGACMQVMCMPKTVQPGDVFHIRVRFCMQRPRRWHLTFGLLDQKTKEFYGGAGAGIVDTKTQCGEVTFEHPFDAGETPAGGFDLMWKFFIIPNHGMNGFYVEDTFPNMIAEAGVDQQPNYLAPLDPAADCPAQDMLQWNLPPTGYQNGIEYTVIPKCFQPGVAWIIQVDTHLETDDAADLHCNLQIGSGADIYLGPADEFIAEYKVNALKANPKTNSWAAIPKGYWTTTPVLFTAAETALVEPGSPVYVSCFMTPVDAVFNKL----------VPGGWKILEREFYLAM 395          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A836CPC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPC5_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.360e-64
Identity = 117/281 (41.64%), Postives = 166/281 (59.07%), Query Frame = 1
Query:   37 PGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPYGSTGF-TPGGAYQCGEHTY---------------TQNVKAVTPQP-DLMFKFFLQPVWGP-PDLNSYDPFPNVIAEVGLNKQPDFGALVN---DCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAK 816
            PGV  G+C+QVMC+P ++     FHTTVR+CLQRPR +H +F ++D  TK   G  GF      +QC EHT+               T+    +TP   DLM+KFF  P WG   D    D FPN++AE G++ QP++   +    DC   PTR WN+ PTG+++GI+F  +P C+ PGE W+I V+TH+E+   ADL VN+QIG+G D YLG  D+YV ES+++G+  N         P + WT + + FT  QT+LV + D +Y+A F+V     Y+ K
Sbjct:   70 PGVKPGACMQVMCVPKAVEKLDKFHTTVRFCLQRPRKWHLAFGLLDMKTKAYLGGEGFGIVDEEWQCAEHTFEHVFLAPKDLPDPATTKPYPNLTPSKLDLMWKFFAIPNWGTGADDYVEDTFPNMLAEAGIDIQPNYLKPLTPEGDCPIKPTRFWNLPPTGEEDGINFSVIPPCLAPGEEWTIVVDTHIESVPMADLHVNMQIGSGGDVYLGDADVYVTESDIFGLDKNT--------PGRKWTQNVVTFTKAQTKLVTRTDKVYLATFLVRPNSQYNKK 342          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A835YN55_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN55_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.510e-63
Identity = 113/275 (41.09%), Postives = 157/275 (57.09%), Query Frame = 1
Query:   94 PGKDFHTTVRWCLQRPRAFHGSFDIIDRDTKDPY-GSTGFTPGGAYQCGEHTYTQNVKAVTPQPDLMFKFFLQPVWGPPDLNSY--DPFPNVIAEVGLNKQPDFGALVNDCAPVPT-----RVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSM 894
            PG  F  TVR+CLQRPR +H +F ++D  TK+ Y G          QC E T+T          +LM+KF++   WG  + N Y  D FPN++AE G+  QPD+   ++     P      R+W+  PTG QN ID+  +P C  P   W+++VNTH+ET D ADL  NLQIG+GAD +LG  D+Y+ E++V G+ +NPVA  W  LPP YWT +DI FT +QT +V  G  +Y++ F+VP G +Y+A              GW  L   F TS+
Sbjct:    2 PGNQFRVTVRFCLQRPRRWHLAFALLDMVTKEYYMGDGNGIVDMESQCAEVTFTDIFDVPPDANNLMWKFYVVANWG--NANDYVEDVFPNMLAETGVPMQPDYTQPLDPANMCPETDPNPRMWSYPPTGFQNAIDYAVVPPCFQPNAEWAVQVNTHIETVDEADLHCNLQIGSGADVFLGPADLYLTETDVPGLQANPVAKTWDALPPNYWTINDIVFTPEQTGMVQDGQPVYLSCFLVPAGAIYNAA----------VPGGWHLLEREFFTSV 264          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A836CMI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.020e-38
Identity = 75/181 (41.44%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  289 MFKFFLQP---VWGPPDLNSYDPFPNVIAEVGLNKQPDFGA----LVNDCAPVPTRVWNVAPTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYD 810
            M+K+F+ P   +  P D    D FPN++AE G+ KQP + A       DC  + TR+WN  PTG+Q+ +++ + P C+TPG+PWSI++  HLE+   AD+R NL +GTG DKYLG  D++V E NV+ V  N           K WT+H ++FT+ QT+L  K  + Y+ +FMVP G  ++
Sbjct:    1 MWKYFVTPRHYLDHPTD----DIFPNMLAESGIYKQPQYLADGVPTQGDCPILKTRLWNEKPTGKQDAVEYTERPACITPGKPWSIQIRYHLESIQKADMRTNLMLGTGGDKYLGPNDVFVTE-NVFTVSDN-----------KGWTAHTVQFTAAQTQLFAKRPSPYVTSFMVPAGSEFN 165          
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Match: A0A835YNJ3_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ3_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.590e-27
Identity = 71/178 (39.89%), Postives = 92/178 (51.69%), Query Frame = 1
Query:  397 GALVNDCAPVPTRVWNV----------APTGQQN--GIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGADKYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELVNKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSM 894
            GA   DC  VP R W+V          A  G +N   I+FP +PDC+TPGE W ++V  H+ +  AADL VNLQ+GTG + YLGAKD YV E+N +G+          D    YW +    F+  QT  +  GD  YI AF+VP G  YDA              GWKTL   ++ S+
Sbjct: 1139 GATEGDCNAVPDRSWDVLEPVPGLGAAADAGVKNVDAINFPAVPDCITPGENWDLKVQAHVASLPAADLHVNLQLGTGPNGYLGAKDAYVAEANAFGLKKAAPDATPDDAA--YWDNVVSGFSPLQTRNLKAGDTPYIVAFLVPPGSEYDAT----------IPGGWKTLAKEYYLSL 1304          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175213 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835ZD28_9STRA1.290e-252100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2T5_9STRA8.690e-7445.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZES1_9STRA2.410e-7140.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLJ9_9STRA2.990e-6641.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPC5_9STRA3.360e-6441.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN55_9STRA2.510e-6341.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMI4_9STRA2.020e-3841.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNJ3_9STRA2.590e-2739.89Fatty acid desaturase-domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:344036..346999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175213|e_gw1.122.64.1
Hectar predicted targeting categoryother localisation
TranscriptId175535
TrackFilteredModels1
ProteinId175213
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175213gene_13941Tribonema minus UTEX_B_3156 geneContig_122 344036..346999 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13941_1exon_13941_1Tribonema minus UTEX_B_3156 exonContig_122 344036..344157 +
exon_13941_2exon_13941_2Tribonema minus UTEX_B_3156 exonContig_122 344691..344773 +
exon_13941_3exon_13941_3Tribonema minus UTEX_B_3156 exonContig_122 345710..346114 +
exon_13941_4exon_13941_4Tribonema minus UTEX_B_3156 exonContig_122 346620..346999 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13941CDS_13941Tribonema minus UTEX_B_3156 CDSContig_122 344036..344157 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175213Trimin1|175213|e_gw1.122.64.1Tribonema minus UTEX_B_3156 polypeptideContig_122 344036..346999 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13941 ID=mRNA_13941|Name=jgi.p|Trimin1|175213|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=990bp|location=Sequence derived from alignment at Contig_122:344036..346999+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCAATCTTTCTGTTGCCTTGCTTTATGCACGCCCAGGTGTCCCCGA
CGGCAGCTGCGTGCAAGTGATGTGCATACCGGACTCCATCACCCCTGGCA
AAGACTTCCACACCACTGTCAGGTGGTGCCTCCAGAGGCCAAGGGCTTTC
CATGGCTCCTTTGACATCATTGACCGCGACACCAAGGACCCTTACGGCTC
CACCGGCTTCACGCCCGGCGGCGCATACCAGTGCGGCGAGCACACCTACA
CGCAGAACGTCAAGGCAGTGACGCCCCAGCCCGACCTCATGTTCAAGTTC
TTCCTGCAGCCCGTGTGGGGTCCCCCCGACCTCAACAGCTACGACCCCTT
CCCCAACGTCATTGCCGAAGTGGGCCTTAATAAGCAGCCCGACTTTGGCG
CTCTCGTTAATGACTGCGCGCCCGTGCCAACACGGGTGTGGAACGTCGCT
CCCACGGGACAGCAGAACGGCATCGATTTCCCCAAGTTGCCTGACTGCGT
GACCCCTGGGGAGCCGTGGTCGATACGCGTGAACACGCACTTGGAGACAG
AGGATGCTGCAGATCTGAGGGTGAATCTGCAGATTGGCACGGGCGCTGAC
AAGTACCTAGGCGCCAAAGACATCTATGTTGGCGAGTCCAACGTCTATGG
TGTGCTCAGCAACCCTGTGGCCACCAAGTGGTCCGACCTACCCCCCAAGT
ACTGGACCAGCCACGACATTGAGTTCACCAGCAAGCAGACAGAGCTGGTC
AACAAGGGTGACAATATCTACATTGCCGCGTTCATGGTGCCCAAGGGAGA
GGTGTACGACGCCAAGCAGGAATGGACATGTAAGTGGCGCTTGCATTGTG
CTGCAGGTTGGAAAACTCTGTTGATGTTATTTCATACATCCATGTACAAT
GAGAATATCAAAACAAGCCTTTCTATGGACACCCAGGCGCTCAACCTATC
ACTAACCTTAGCCCTAACCCTAGCCCTCAACAGATCATGA
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protein sequence of jgi.p|Trimin1|175213

>Trimin1|175213|e_gw1.122.64.1 ID=Trimin1|175213|e_gw1.122.64.1|Name=jgi.p|Trimin1|175213|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=330bp
MLNLSVALLYARPGVPDGSCVQVMCIPDSITPGKDFHTTVRWCLQRPRAF
HGSFDIIDRDTKDPYGSTGFTPGGAYQCGEHTYTQNVKAVTPQPDLMFKF
FLQPVWGPPDLNSYDPFPNVIAEVGLNKQPDFGALVNDCAPVPTRVWNVA
PTGQQNGIDFPKLPDCVTPGEPWSIRVNTHLETEDAADLRVNLQIGTGAD
KYLGAKDIYVGESNVYGVLSNPVATKWSDLPPKYWTSHDIEFTSKQTELV
NKGDNIYIAAFMVPKGEVYDAKQEWTCKWRLHCAAGWKTLLMLFHTSMYN
ENIKTSLSMDTQALNLSLTLALTLALNRS*
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mRNA from alignment at Contig_122:344036..346999+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13941 ID=mRNA_13941|Name=jgi.p|Trimin1|175213|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2964bp|location=Sequence derived from alignment at Contig_122:344036..346999+ (Tribonema minus UTEX_B_3156 )
ATGCTCAATCTTTCTGTTGCCTTGCTTTATGCACGCCCAGGTGTCCCCGA CGGCAGCTGCGTGCAAGTGATGTGCATACCGGACTCCATCACCCCTGGCA AAGACTTCCACACCACTGTCAGGTGCGTGTCTACTGCTGCTGACCATATC CCTAACCCTAACTAACCCTGACCCTGAGCACTTGCCAGAACAGAGCTCTG CCAAACTGTCGTGCAAATACCACATGGATAGTTTGAGGACCGCATGCATG GACACCTTTGCCCAAAATGCACTCACTGCAAGGTGAGGGTAGGGTGTGAG TATACACTATACATTGTAGATAGCAACTTGTCACAATTGTGGAGATGTAG CACAAGTTCAGCTTCCCCAACGGCTGCTTAAATGAGTGTTTTGAACTACA GTACACACAACGAGCATGACATGTCTTAACACTGCTCTGCCACATGTGCT ACCTCACTCCACCTGGAATTGCGTATTGCCATTTGAGGCAGAAATCTGCT TTAGTGCCATCGCCCTGAGAGTTCAGTTGCTGCTTGTGAGACAGCAACAT GAATCACCACCGCCACCTCTTGGAGCGCTTCACGAATGAAATTTCCAGTC ATGTGCCAGGACACAGTCTGACTGCTGTGCTGTTGATCACTGACATGATG TGCAGGTGGTGCCTCCAGAGGCCAAGGGCTTTCCATGGCTCCTTTGACAT CATTGACCGCGACACCAAGGACCCTTACGGCTCCACCGGTAAGTGCAAAT CCATCATCATGCAGCGTTGATGCCGAGTGTTCTGCCTGCAGGCAGAGCAA ACATCAGACTAACAGTCATTTTGTGCTGGAGTGCATTGCAGTAACCTTAA CCCTAAGCCCAACCCCAAAGTAACCCGATGTCTAGCCCTAACCCCCCCCC ACCCTAACTCACGCCCGAACCCTACCGGCACCCTCTTTATGGTACTTGTA ACCCCAGCCTAGTTTTTCAGGTGACCAAACCATTCTAAGGGAAGCGTAAC ATGCTGCCCCAGCCAGGCACTTGAACAGGCTTTCACAACAGTTCCGAACG CCTACCAATAGGCATTAGGTGATTCAGCCTTCTGATGCATGTCTGCAATG CTGTAGGGTGTATTCTGCCAAGCGGCATCAGTGCTACACAACCCGGAATG GAATAGCTGAACTAAACTTTCATATTTGGTCACATGCAAGAGGCTGCTGG TGTTTTACGTAACACTTATGCATACGTACACCGATGCTAAAGTCTATCGA CACAGCGCTTACTTCACACCAGGTTATGCCTGGGTTGGCATTCGCAAAAC AAACAAAGCGCAAGATCCACGAGATCTCCAGGCATTGCTACCTTTGTGCG CAGGCTTAGGGCTAGGGTTAGGCAATGCGGCACCAGTGCAGCGAGCCTAC GCATGATGCACCGCTCTGCAGGCATTGTTGAGAGTACTCGGCTGTATGTC GCTGCTTGTGGCATTCATACGTGGTGCTTGAGCTATACTATAGTAAGAAC GCGTGCTGCTCCCTGTCTGCACAATGTGGCCAACACTCCATATACTGCTG AGGTGCATTCGCTGCACTCAACTGCTTGCCACTCAGTCATACAGCAACTG AAGTTGACCTGAAACCTCTGAGCCAGTATAACCAACGCTATGCGCTTCGT GTTCGAACTCATGTATGCGCACAGGCTTCACGCCCGGCGGCGCATACCAG TGCGGCGAGCACACCTACACGCAGAACGTCAAGGCAGTGACGCCCCAGCC CGACCTCATGTTCAAGTTCTTCCTGCAGCCCGTGTGGGGTCCCCCCGACC TCAACAGCTACGACCCCTTCCCCAACGTCATTGCCGAAGTGGGCCTTAAT AAGCAGCCCGACTTTGGCGCTCTCGTTAATGACTGCGCGCCCGTGCCAAC ACGGGTGTGGAACGTCGCTCCCACGGGACAGCAGAACGGCATCGATTTCC CCAAGTTGCCTGACTGCGTGACCCCTGGGGAGCCGTGGTCGATACGCGTG AACACGCACTTGGAGACAGAGGATGCTGCAGATCTGAGGGTGAATCTGCA GATTGGCACGGGCGCTGACAAGTACCTAGGTGAGTCACGAAGTCGCATGC AGAGTTTGAAGTGCATGCAAGATTGAAGTACGATTTGTTATTATGGTTGC CAATGTTGGACTGGGTGCGGCAGTCTCCTGTAGTGTGTGTTTGTTGTGTG TAGCTGCTACCAGTTGCTGTCGACTACCCGACCCGCTCCTTTTGCAAACA AACACATAGTTGAAGTTTACGTATTGCGCATGTGAAGTGTGTGTATGTCA TGTGCCACACCATGTACCACAGCAGTTCAGACTGTGTGCTGCATGTACGC CTCATTGCGACGTTGCACACTGTACTTTCTTGCATGCATCGCCGGCTTGG TCTCTGTACGCGCTTCATCCATGAAAGATTTATTGACAGGTGCATATGCG CACTACCACCTGTTGAGCAAGCACAATGCACATCAGAGCTGCACGAGTAA GGATGAGGTTCGCTGACGAGGCCATCAAACACTCATTCGTTCCATTTGTT GCCTGCAACTCCTTGTCTGCGAGTCGTCTTACAGGCGCCAAAGACATCTA TGTTGGCGAGTCCAACGTCTATGGTGTGCTCAGCAACCCTGTGGCCACCA AGTGGTCCGACCTACCCCCCAAGTACTGGACCAGCCACGACATTGAGTTC ACCAGCAAGCAGACAGAGCTGGTCAACAAGGGTGACAATATCTACATTGC CGCGTTCATGGTGCCCAAGGGAGAGGTGTACGACGCCAAGCAGGAATGGA CATGTAAGTGGCGCTTGCATTGTGCTGCAGGTTGGAAAACTCTGTTGATG TTATTTCATACATCCATGTACAATGAGAATATCAAAACAAGCCTTTCTAT GGACACCCAGGCGCTCAACCTATCACTAACCTTAGCCCTAACCCTAGCCC TCAACAGATCATGA
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Coding sequence (CDS) from alignment at Contig_122:344036..346999+

>mRNA_13941 ID=mRNA_13941|Name=jgi.p|Trimin1|175213|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=990bp|location=Sequence derived from alignment at Contig_122:344036..346999+ (Tribonema minus UTEX_B_3156 )
ATGCTCAATCTTTCTGTTGCCTTGCTTTATGCACGCCCAGGTGTCCCCGA
CGGCAGCTGCGTGCAAGTGATGTGCATACCGGACTCCATCACCCCTGGCA
AAGACTTCCACACCACTGTCAGGTGGTGCCTCCAGAGGCCAAGGGCTTTC
CATGGCTCCTTTGACATCATTGACCGCGACACCAAGGACCCTTACGGCTC
CACCGGCTTCACGCCCGGCGGCGCATACCAGTGCGGCGAGCACACCTACA
CGCAGAACGTCAAGGCAGTGACGCCCCAGCCCGACCTCATGTTCAAGTTC
TTCCTGCAGCCCGTGTGGGGTCCCCCCGACCTCAACAGCTACGACCCCTT
CCCCAACGTCATTGCCGAAGTGGGCCTTAATAAGCAGCCCGACTTTGGCG
CTCTCGTTAATGACTGCGCGCCCGTGCCAACACGGGTGTGGAACGTCGCT
CCCACGGGACAGCAGAACGGCATCGATTTCCCCAAGTTGCCTGACTGCGT
GACCCCTGGGGAGCCGTGGTCGATACGCGTGAACACGCACTTGGAGACAG
AGGATGCTGCAGATCTGAGGGTGAATCTGCAGATTGGCACGGGCGCTGAC
AAGTACCTAGGCGCCAAAGACATCTATGTTGGCGAGTCCAACGTCTATGG
TGTGCTCAGCAACCCTGTGGCCACCAAGTGGTCCGACCTACCCCCCAAGT
ACTGGACCAGCCACGACATTGAGTTCACCAGCAAGCAGACAGAGCTGGTC
AACAAGGGTGACAATATCTACATTGCCGCGTTCATGGTGCCCAAGGGAGA
GGTGTACGACGCCAAGCAGGAATGGACATGTAAGTGGCGCTTGCATTGTG
CTGCAGGTTGGAAAACTCTGTTGATGTTATTTCATACATCCATGTACAAT
GAGAATATCAAAACAAGCCTTTCTATGGACACCCAGGCGCTCAACCTATC
ACTAACCTTAGCCCTAACCCTAGCCCTCAACAGATCATGA
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