mRNA_13903 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175162
Unique NamemRNA_13903
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A836CML1_9STRA (Asparaginase, c-terminal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML1_9STRA)

HSP 1 Score: 506 bits (1304), Expect = 4.030e-181
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPPNDDLT 783
            MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPPNDDLT
Sbjct:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPPNDDLT 261
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BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: D8LBH2_ECTSI (Asparaginase, c-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH2_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.700e-88
Identity = 146/258 (56.59%), Postives = 184/258 (71.32%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQ--SDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPP 768
            M G  ++YGAV+A+ GVV+A SAAR+VMERSPH++L G GA  FAV NG+  AE LT+ A   + +WRRQ   +  +D  G +        HDT+G+ICLD +G+L AGTSTSGW FKHPGRVGD+PV+G+GLYCD+  GAAVATGDGEEILRT  +F  VE MR G +PQ AC K +AR+ +       SAA R     +RMH +LTVAV+AM+PKG++GAAS+LGP NVHRGRP FP A+WR G    +VEE + P
Sbjct:    1 MEGTSMSYGAVLAVRGVVKAFSAARVVMERSPHSVLAGEGATTFAVRNGIEAAETLTDDAKQQFEDWRRQHLEEEGSDHRGES--------HDTVGVICLDHDGNLCAGTSTSGWKFKHPGRVGDAPVVGSGLYCDSSVGAAVATGDGEEILRTCLSFAVVEFMRGGDSPQLACKKGIARLEET---VKRSAAGRSVEEVNRMHDRLTVAVMAMNPKGDIGAASTLGPRNVHRGRPSFPLAIWRKGDPVRVVEETEIP 247
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BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A4D9D6T5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T5_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.360e-61
Identity = 122/263 (46.39%), Postives = 152/263 (57.79%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRR-----------QSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEE 756
            MCG   TYG V AL GV RA+S AR VME S H+ L G GA  FA + G    E L+  A   +  W+            + + S          +  APHDT+G++ LD +G+LAAGTSTSGW FKHPGRVGDSP++G+GLY D+  G AVATGDGEEI+R   +F  VE MR G  P  AC   + R+     A  +     G R    MH  LTVAV+A+  +G VGAAS+LG  N HRGRP FP+ +W+ G     VEE
Sbjct:   27 MCGSRKTYGGVAALQGVSRAISVARRVMEESVHSFLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNEGKEAPQVDGREEESARVPAPPREGDAAAPHDTVGLLVLDAHGNLAAGTSTSGWRFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIRRLK----ALISEGGGEGERQG--MHENLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEE 283
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A7S2RWR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWR5_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.650e-60
Identity = 123/237 (51.90%), Postives = 157/237 (66.24%), Query Frame = 1 
Query:   58 AVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARI--VQASAACST----SAAARGPRADS--RMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGE 744
            AVS AR VME S H +L G GA ++A   G+A A  LT+   AA +EW+R        A  + S   +  HDT+G++C+D +G +AA TSTSGW FK PGRVGDS +IG+GLYCDN AGAAVATGDGEEI+R   +F AVE MR G +P  AC  A+ R+  +QA  A S+    S+AA+G  + S   MHS LTVAV+AM   G VGAAS++G +N HRG+P FPY +WRG  + E
Sbjct:    4 AVSVARHVMEHSVHNVLVGEGATEYAERIGLADASVLTD---AATNEWKRWK------AEESCSPRDEECHDTVGVLCMDCDGRIAAATSTSGWKFKLPGRVGDSALIGSGLYCDNSAGAAVATGDGEEIMRGCLSFLAVEEMRRGASPTEACQVAIRRLRELQAEGAPSSAPQASSAAQGADSPSGTSMHSTLTVAVMAMDKDGRVGAASTIGRANPHRGKPGFPYVMWRGQQEEE 231
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: W7U6H4_9STRA (N-(Beta-n-acetylglucosaminyl)-l-asparaginase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6H4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 3.500e-59
Identity = 122/263 (46.39%), Postives = 153/263 (58.17%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWR--------RQSDTSTDTAGATVSV---EIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEE 756
            MCG   TYG V AL GV RA+S AR VME S H++L G GA  FA + G    E L+  A   +  W+        +      ++AG        +  APHDT+G++ LD +G+LAAGTSTSGW FKHPGRVGDSP++G+GLY D+  G AVATGDGEEI+R   +F  VE MR G  P  AC   + R+              G R    MH  LTVAV+A+  +G VGAAS+LG  N HRGRP FP+ +W+ G     VEE
Sbjct:  169 MCGSRKTYGGVAALQGVSRAISVARRVMEESVHSLLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNEGKEGPQVDGRKEESAGVPAPPREGDAVAPHDTVGLLVLDAHGNLAAGTSTSGWCFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIQRLK----VLIREGGGEGERQG--MHESLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEE 425
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: L1INR1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1INR1_GUITC)

HSP 1 Score: 196 bits (498), Expect = 7.950e-59
Identity = 108/242 (44.63%), Postives = 151/242 (62.40%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWR 726
            M G     G V+A+ G+   VS AR +ME   H +L G GA+ FA+ NG      LT+ +   +  W+R+ +          +V+ +A HDTIG+IC D  G L   TSTSGW FK PGRVGDSP++G+G Y D   GAAVATGDGEEI+R   +F  VE MR G +P  AC  A+AR+ ++     + A+ +G   ++R H KLTV ++AM+  G+VGA+S+LGP+N+HRG+P FP  +W+
Sbjct:    1 MRGRGYRLGCVLAVQGISTPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN---------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARL-RSKKEFLSGASFQG---ENRQHKKLTVGIVAMNTNGDVGASSTLGPANIHRGKPAFPCIVWK 229
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BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A7S4KZ67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZ67_GUITH)

HSP 1 Score: 171 bits (433), Expect = 8.330e-48
Identity = 101/225 (44.89%), Postives = 137/225 (60.89%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLG 675
            M G     G V+A+ G+   VS AR +ME   H +L G GA+ FA+ NG      LT+ +   +  W+R+ +          +V+ +A HDTIG+IC D  G L   TSTSGW FK PGRVGDSP++G+G Y D   GAAVATGDGEEI+R   +F  VE MR G +P  AC  A+AR+    A  S+ A+ +G   ++R H KLTV ++AM+  G+VGA+S+LG
Sbjct:  103 MRGRGYRLGCVLAVQGISTPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN---------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARL---RAIQSSGASFQG---ENRQHKKLTVGIVAMNTNGDVGASSTLG 312
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A524AQX5_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524AQX5_9CHLR)

HSP 1 Score: 161 bits (407), Expect = 1.100e-44
Identity = 100/241 (41.49%), Postives = 138/241 (57.26%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALW 723
            M G     G+V AL  + R +S AR VME S HA+L   GA  FA+++G +  + LT+ + A + EW+R     + T           PHDTIG++ LD  G +A G STSGWP K PGRVGDSP+IG+GLY DND G A ATG GEEIL+  A+F  VE MR GH+P  AC + + RI++           + P+A      ++T+ ++A++ +GE GAA +         R  F YA+W
Sbjct:   73 MDGRTHDAGSVAALRRIRRPISVARRVMEASQHAMLVADGALAFALSHGFSAEDLLTQESMAKWREWQRDEQAGSPT-----------PHDTIGLVALDGEGDIACGCSTSGWPHKPPGRVGDSPLIGSGLYVDNDVGGAAATGLGEEILKFCASFLVVEQMRNGHSPMDACRRTIERILR-----------KKPQAR-----EVTIGLVALNGRGESGAACT---------RSGFEYAVW 277
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: A0A1W1ZQX3_9FLAO (N4-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Moheibacter sediminis TaxID=1434700 RepID=A0A1W1ZQX3_9FLAO)

HSP 1 Score: 162 bits (409), Expect = 1.580e-44
Identity = 101/247 (40.89%), Postives = 145/247 (58.70%), Query Frame = 1 
Query:   10 EHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELV 750
            E   YG+V+ L  +V A+S AR VME++PH +L G GA +FA++ G      LTE A  A+ EW+ +S+         +++E    HDTIGM+ +D NG+L+ G +TSG  FK  GRVGDSP+IG+GL+ DN+ GAA ATG GEE+L+T  +F  VELMR G TPQ AC +AV RI++           +  R D        V  +A++ KGE+GA +      +H   P F Y +++ G    ++
Sbjct:  109 EKGNYGSVVFLHNIVNAISVARKVMEKTPHVLLAGKGAEEFALSQGFKSQNLLTENAKKAWEEWKVKSEYKP-----IINIE---NHDTIGMLTMDKNGNLSGGCTTSGLAFKMHGRVGDSPIIGSGLFVDNEIGAATATGLGEEVLKTVGSFLVVELMRQGKTPQQACEEAVHRIMKK----------QPDRKD------FQVGYIAVNKKGEIGAYA------IH---PGFSYTVYQNGQNNNVI 322
[Close]
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Match: UPI001F041AB9 (N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F041AB9)

HSP 1 Score: 159 bits (402), Expect = 1.220e-43
Identity = 104/263 (39.54%), Postives = 148/263 (56.27%), Query Frame = 1 
Query:    1 MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGMALAEAL---TEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGH-TPQAACTKAVARIVQASAACSTSAAARGPRADSRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGR---PVFPYALWRGGSQGELVEEQKPP 768
            M G    +GAV AL GV +  S ARLVME SPH+IL G GA+ FA   G+ +   +   TE +  AY E++ ++  S  TA +         HDTIG++  D +G++AAGTSTSG PFK  GRVGDSP+ GAGLY DN+ GAA ATGDG+ ILR    F+ V+LM+  + +P+ AC   +A I +                    +    +A+++M+  G++G AS++  S+ H G+   P F Y++W    QG      +PP
Sbjct:   70 MDGRKCRFGAVAALQGVAKPFSVARLVMEHSPHSILVGEGAKLFATQQGIPILSNMSLQTENSLKAYQEYKHENMKSRQTASS---------HDTIGLLLRDFDGNIAAGTSTSGKPFKSCGRVGDSPLPGAGLYADNEGGAAAATGDGDNILRFCPCFHVVQLMKKHNMSPKNACRTVIADIWKRVG----------------QNEMFKMALISMNVNGDIGVASTVEESSNHYGKDALPGFAYSIWNSKQQGPPKVVCEPP 307
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175162 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CML1_9STRA4.030e-181100.00Asparaginase, c-terminal n=1 Tax=Tribonema minus T... [more]
D8LBH2_ECTSI1.700e-8856.59Asparaginase, c-terminal n=2 Tax=Ectocarpus TaxID=... [more]
A0A4D9D6T5_9STRA1.360e-6146.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2RWR5_9STRA1.650e-6051.90Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
W7U6H4_9STRA3.500e-5946.39N-(Beta-n-acetylglucosaminyl)-l-asparaginase n=2 T... [more]
L1INR1_GUITC7.950e-5944.63Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4KZ67_GUITH8.330e-4844.89Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A524AQX5_9CHLR1.100e-4441.49Uncharacterized protein n=1 Tax=Anaerolineales bac... [more]
A0A1W1ZQX3_9FLAO1.580e-4440.89N4-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 ... [more]
UPI001F041AB91.220e-4339.54N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:60573..66421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175162|e_gw1.122.115.1
BRITEko00000,ko00001,ko01000
KEGG Pathwayko00511,ko04142,map00511,map04142
KEGG koko:K01444
EC3.5.1.26
DescriptionN4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1446@1|root,KOG1593@2759|Eukaryota
Evalue2.78e-89
Seed ortholog2880.D8LBH2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAsparaginase, c-terminal
Ec32 orthologEc-27_003980.1
TranscriptId175484
TrackFilteredModels1
ProteinId175162
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175162gene_13903Tribonema minus UTEX_B_3156 geneContig_122 60573..66421 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175162Trimin1|175162|e_gw1.122.115.1Tribonema minus UTEX_B_3156 polypeptideContig_122 60573..66421 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13903_4exon_13903_4Tribonema minus UTEX_B_3156 exonContig_122 60573..60791 -
exon_13903_3exon_13903_3Tribonema minus UTEX_B_3156 exonContig_122 61656..61834 -
exon_13903_2exon_13903_2Tribonema minus UTEX_B_3156 exonContig_122 62373..62548 -
exon_13903_1exon_13903_1Tribonema minus UTEX_B_3156 exonContig_122 66210..66421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13903CDS_13903Tribonema minus UTEX_B_3156 CDSContig_122 66210..66421 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13903 ID=mRNA_13903|Name=jgi.p|Trimin1|175162|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=786bp|location=Sequence derived from alignment at Contig_122:60573..66421- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTGCGGCGAGCACCTCACGTACGGCGCGGTGATGGCGCTGCCCGGCGT
AGTGCGCGCCGTGAGCGCGGCGCGACTCGTCATGGAACGGTCCCCGCACG
CAATCCTGTGCGGCGGCGGCGCGCGCGACTTCGCCGTGGCGAATGGGATG
GCGCTGGCAGAGGCGCTGACGGAGGGTGCCGCGGCCGCGTATTCGGAGTG
GCGGCGGCAGAGTGACACTTCAACGGACACAGCAGGGGCAACCGTGTCAG
TTGAGATTGACGCTCCCCACGACACCATTGGCATGATCTGCCTGGATGTC
AATGGTCATCTTGCGGCGGGCACCAGCACCAGCGGGTGGCCCTTCAAGCA
CCCGGGGCGAGTGGGTGACTCCCCCGTCATTGGTGCAGGACTGTACTGCG
ACAACGACGCCGGCGCCGCGGTAGCCACAGGCGATGGTGAAGAGATCTTA
CGAACAAGCGCGGCATTCTATGCCGTGGAGCTTATGCGCGCGGGTCACAC
GCCGCAGGCTGCATGTACGAAGGCGGTGGCACGGATCGTTCAGGCGAGTG
CGGCATGTTCCACTAGTGCTGCCGCCAGAGGGCCGCGCGCAGACAGCCGC
ATGCACTCAAAACTCACCGTTGCGGTGCTAGCAATGAGCCCCAAGGGGGA
GGTGGGGGCTGCCTCATCACTAGGCCCTAGTAATGTACATAGAGGGCGGC
CCGTGTTCCCCTATGCGTTGTGGCGCGGCGGCAGCCAAGGGGAGCTCGTT
GAAGAGCAGAAACCCCCTAATGATGACCTGACTTGA
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protein sequence of jgi.p|Trimin1|175162

>Trimin1|175162|e_gw1.122.115.1 ID=Trimin1|175162|e_gw1.122.115.1|Name=jgi.p|Trimin1|175162|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=262bp
MCGEHLTYGAVMALPGVVRAVSAARLVMERSPHAILCGGGARDFAVANGM
ALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDV
NGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEIL
RTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRADSR
MHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELV
EEQKPPNDDLT*
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mRNA from alignment at Contig_122:60573..66421-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13903 ID=mRNA_13903|Name=jgi.p|Trimin1|175162|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5849bp|location=Sequence derived from alignment at Contig_122:60573..66421- (Tribonema minus UTEX_B_3156 )
ATGTGCGGCGAGCACCTCACGTACGGCGCGGTGATGGCGCTGCCCGGCGT
AGTGCGCGCCGTGAGCGCGGCGCGACTCGTCATGGAACGGTCCCCGCACG
CAATCCTGTGCGGCGGCGGCGCGCGCGACTTCGCCGTGGCGAATGGGATG
GCGCTGGCAGAGGCGCTGACGGAGGGTGCCGCGGCCGCGTATTCGGAGTG
GCGGCGGCAGAGGTGACGCTCCACAATGGAAAAAAGACCTTGCAAATAAG
CTCTTCTCTCAAGTAGTGTGCGCCCAGGTGTTGTCAATGCATCGCATCTC
GTTGCCGTCATGGAACGCATCTCGGTACTTGTACTGAACTGATGCTTTCT
TGACTCAAAGAAATTCAACCAAGTCAAACGCACACCATATTCCTGTAGTC
TCTGTAATGAAAGGCTCATAAACCATATGTCTGCAACACTCCCAGTTCCA
AAGCACCTGAAAGATACTCGAACCGTCTGCAAACGACCCCCTCAAGCAGC
CAGATCTGTGTGCGCATATGCTGTTGTCACACAGCTGGCTATAACGATTG
CATGCGCCTGCTGCGAGGTGCGATGAGCTTTGTGCTGCAGTGCAGCAGCA
GACCAGGTTTTCAAAACAGCGTGTTCATTGAGACGGGCAGCAGCACAGCA
GTACACAACGTCAAAAACCGCTGAGAACAGCATGCACTTTCACGTGGGGC
GGTCGCCGCATCGGCAGCTGCATTTGACAGGACATCACTCGCTCATGCTG
GTGGGGGAGCACTGCGTCACGGTAGGTATATATGCATCAACTTTCTGTGA
TCTTCCTGACAGGCGCACTCACAAACACACAGCGCTATCTGTAAGCACGC
AGCGCTATGGAACTTTGGCAACAAAACTCGTGCGCTGAAGACACGCGTCA
CTCACTGAATAGGCACACTTGACAGGCAGGTTACACAGTGCCCCACCCAA
AACCTCGGCCGCTGTGATGGCAACTTTGCTGTACAAACGTTGGACATACA
TGCTACGGCTCATATTGTGGCTCGGTGTGATGGTGTCAGTTGCCATGCGG
CGGTGTGGGGAGAAAGGGGAATAAAGGGGGGCGTGTGCGCATCATGTGCG
CCTGAGCAGCCGCGGGCACGGGGGATGGTATAGGTATCTGCGGCCTCTCT
CACTGGGTGTGCGTGGACTGGCCCGTGTCCCTTTGCTTGGCCGCGGCGCT
GTCAGTGCGAGAGGACGGGGCAAACATGGCGCAAAGCTTGGCAGTTAACA
TTTGTAGCTGTTGTGCACAAGGGTGCTGCACGCAGGGCGTATGGCATTAG
GGTCGACGTCAAGAATCAACTTCGAGCTCACACAACGCTGTGCTCTTGGA
GACTCGCAGGTTGAGGTTCAGTGCTGTGCACGGTGTTCATTTGTTCTAAA
AGTAACCCATGCGTTCTTGAAACTGCCATGTACATTCAGTCAATGTGGCT
CAATCGGCCGACCCCGGTCTGCAGACACCTAGTACAACGGTCCAGAGCTC
AACACTTGACTTAGCCGCCTCCCAGTAAGGAAAAGGCAACTGCAAGCAGC
ACATACCAGGACCAACCCTGCTGCGTGCGTGCTGCGTGCGACATCGAATC
TGAAATTCCTTTGGTGATACAACCAAGCGGAAGATATATGCCTGCACGAT
TCCTGCTAATTCCCTTCTCACATGCATCAATGTTCCTTGCTTCACAAGTG
CTGTGCAAGCAGTCGTGTGGACTACTGCTATGCATGTACACACTATGATT
ACAAAAGTTCATCGTTAATTCAAATTTTCGAACCTCAAAATGTGCGGTAC
TGTTGCTGCATGACACTCAAACGTTTCATCTATCACTGTACTCAGTCATT
CCATAATTATTGTAGAAGTAGTAAAGTGCTGGAGGCGATGATCGCTGAAG
GCAGCGTTGGGCAATCACACCTGCTTTCTTCTTGTCGTGCTACTGCAAGT
TCCGGTTCCTCGCTGATCGACGGCAATCGCTTCACGTGCACGCGCTTGGG
CACGCTACACACAAGTGGCTCCATCACCTGCGCAAACATGACACGGTGCA
CGGTAGGCAGCAAAGAGAGCTAGAAAAAAGAGATGCTGCTTCAACTTGCA
GTTGCCGCAGATTCACCGAGCGTGGTTGTGCGCTCGCGTTGGCGGCTGAG
CTGAGACAGCTCGCACACTGATATGAGGGAAGAAGCATATGTGTAGACCC
ACCGTCTCGATAGGGCTCCGCAAGTGCCTCTCGACCGCCACTGCCAGAGT
CTCCGTGCCTGGTCCGAAGCCCGTCGGAGTCTGTGTTGGCGCCTGGCGGC
ACCACAGATCGTTGCAGTTGCTGTCGAGCATGTTTTACCCACCGCTTTGC
CCTTTGTTGTGGCTCAGTGCTGACGGTATCGTTTGCTGAGGACGTGCTTT
GCTTTTCTGTTTCGAGAGTTTTGAAACCGTAGAAAAATCAACTTCAAGTT
GAACCAGGAAGGTGCTTGCACGCACACTCGCACTTGTAAATCAACAGACA
TCCAAGTCTTGAACAGCTTTTGAAGGTGCCGTCAAAGAGCAGTGAAGGTG
TGGGCTTATGCAATACTGCGTTGGCAACAGAGTGCGATTGCTCCAGGAAT
GGTTTTCTGTGCTTGAACTTGAGGCATTTACGTAGAGTGCACATTATGAC
TTTGACTTTAAATAAATGAGTCACGATTTAGAATGCTTGATGCCGCCAAC
GCACCAAGCCCATAAAGCAATGCGCAACTCACCGTGAGTCATGTAGCGCC
GACGCTCAGTTGTTGATACGCGAAACAACAGCACTCTGTGGTCCACTGTG
ACAGTGCACATCTGGACAGCGCACGCAGAATCAAACAAATGTTGGGGATA
TTTAAGAAGATGACAAGGTATGCGAGATCACTTGAAGTGCTGCGTACGAT
TCATGAGAGCGCAAGCGCAATCATGCGTGACTGGCCGTACGTCAAGGCGC
TCCAGTGCAGCGGCGTCATCACACTTTTTAGGACATTACTTGCTGCATTA
TCATGTTGTGAATATCAATCAATTGCAGAAGCATCTAGGTTGTGCTGCTG
ATTGGTCGAAGAGCATGGGTCCTTGACACATGTTTTAGCACCCAGAGTTA
CGCGCGCAGAAGCTCAAGGCCTCAGGCTGAAGGCAGCTGGCTCTACTTTG
CACTCTTTGTGCTCTGCCACATCTACAGTACTCTCTACGGTGAATTACGA
TCACTGTCTCCTTCAATACAGCTGTGGAGGTCAGCCCTCCAGCTGGAAGT
GGAGGTCATTGACATATCATTGGCCAATACGCACCGCGCCCAACATAAGT
GCAATTGACATTATGAGTCCCCCTTTGGACATGGTGTGCGCTCACTGTGA
AGGTCAGACCAGTAGCTGACCTAAGCGTCGTGCCCGCATCATGTGGTCAT
ACAGCAGCAGGCGGGGCAACATGATGCAATATTGAGAAGCTGTGGGCTGC
ATGCCATACCTTATTGCCTTTGGCCTGGCCCCCAGAGCCGCAGACCTTGC
AACCAGGAACACTTGTTTTTGGCTCCAGAAAGAGCTGTGGCCGGCCCTCC
ACAAAAGCACTGCTGAATCAATCACCTTGACATTTACTATCACTTACGTC
GAGATGTGTTATTGCTGACAGCACCACCGTGAGAGCCGGAATTCCATATT
GCAGCTGTTTCTTACAGCAAACCTATCCAGATGCACCAACGCTGGCGTTC
ATCCACAAGAGAGCAGCTGGTGATGATGCTCCGCATGACACAAACATCAT
GGCGAAATGCCCTCAATCATTCTTTCTTCACCACTTGATACAATGCCGCT
GGTGGCGCGCTTCCGTGCTGTGCAGGTCTTGTGAGAACAGTGGGACTGCC
GCCGCTGGCCCAGCACCGGCAAGTGACACTTCAACGGACACAGCAGGGGC
AACCGTGTCAGTTGAGATTGACGCTCCCCACGACACCATTGGCATGATCT
GCCTGGATGTCAATGGTCATCTTGCGGCGGGCACCAGCACCAGCGGGTGG
CCCTTCAAGCACCCGGGGCGAGTGGGTGACTCCCCCGTCATTGGTGCAGG
TGCGCGCATTGCCAGTAGTCTCACTGTCATTACTCAGTCTTGTCTGAAAA
TCTGATCTCATGTGTGTGTAAGTGTGTGTGTGTGGGGGGGGGGGGGCAAG
TGGGCGACTCTCCAGTGATTGGTGCAGGTGCGCGCTTTGCCAGTAAGCGC
TGTGTTGTTTTCCTGGATATCTGGTCTCAGATGTGCAAGCGTTCAGCTCG
CAGTGCATGAAATTTATGTAGGGAGTTTGCCGCAGCCTAGCAGTGCATGA
AGTAGGCAATTAGCCACAGCCTATTGGTGCAGGTCCGCGCTTTGCCAAGA
AGCTAATCGTTGCTTTCCTGGATGTCTGGTGTCAGATGTGCAAGCTTGCA
GTGCATGGACTTCATGTAGAAAGTTTGCCGCAGCCTAGCAGTGCATGAAG
CAGCTGCAGCCTAGCAGTTGACAGCACTGTCCCCCGAACATCCGGCTACC
GTTGGTGTCCGTGCCCTCCCCCCCCCCCCCCCCCCCCACACACACACACA
CACCCCATACACCCCCCACCCCATCCTGTACTTGCAGGACTGTACTGCGA
CAACGACGCCGGCGCCGCGGTAGCCACAGGCGATGGTGAAGAGATCTTAC
GAACAAGCGCGGCATTCTATGCCGTGGAGCTTATGCGCGCGGGTCACACG
CCGCAGGCTGCATGTACGAAGGCGGTGGCACGGATCGTTCAGGCGAGTGC
GGCATGTTCCACTAGTGTCTTCTGTTTTCCTGCACTGTCGCCCCGCAAAT
GACATGAATATTTCGGACTGCGAGGTACTGTGAATACGCGCCAGAGTGTT
TGGCAGACTACTGCGGCCTGTTCATCATTGGCTGCATTGAACTGCCAGCT
GATTTGAACACACCAGAGTTTCGGCAGACTACTCAGCCCTGTTCATCATT
GGCTGCATGTGTGAAGGCGGTGGCTCGAACTGTATAGGCATGCACGGCCT
CTGCTTGTTGAGCACAATTTTACGTACTGGGGTGCGGTGCCAGTACCACT
TGCCACCACATTAGTAGAGCATCTGTACTCGCCCCGCAGACCACTACAGT
AGTGGAGCATCTGTACTCGCCCCGCAGACCCCTATCTGTCCTAGCCCCGC
AGACCACTCAGACTGCCAGCATTTGCAGCCCCCTGCGCACCCACGGCCTC
TCTGATCAGGCAGTACACCGCCTTCAGTGAGCACCAATGCCATCGCGCCA
TGATGTCATGCTTCACAACAACACTGAAGATGCATGCGTTGTGTAATTGT
CGAGGTACATGCACGTGCAGCATGCAACATTGGCGGCGAACCTGGGTTGC
TCTGCACCGGGGAGTACTTGCCAGTTTGCTGTCCCCCTAAGACATCCTCG
TCAGTCAGCTCACAATCGCTTCCTCCTACAGTGCGCGGTGACAAGCGCGG
TTCACTGCCGCGTACACGGAGCGTGCGCTACCAAGCGCACTACCAAGTAT
ACTGTATCTGTATTACTCAAGTGCCGCGCATCACAACACAAACACCACGG
AGACCAATTTTGACCCTCTCTCTCCCACACGTGCACGATGCGGACTGAAT
ATCTAATTCCTGCCTCGTTTGCGCTTGCAGGCTGCCGCCAGAGGGCCGCG
CGCAGACAGCCGCATGCACTCAAAACTCACCGTTGCGGTGCTAGCAATGA
GCCCCAAGGGGGAGGTGGGGGCTGCCTCATCACTAGGCCCTAGTAATGTA
CATAGAGGGCGGCCCGTGTTCCCCTATGCGTTGTGGCGCGGCGGCAGCCA
AGGGGAGCTCGTTGAAGAGCAGAAACCCCCTAATGATGACCTGACTTGA
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Coding sequence (CDS) from alignment at Contig_122:60573..66421-

>mRNA_13903 ID=mRNA_13903|Name=jgi.p|Trimin1|175162|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=786bp|location=Sequence derived from alignment at Contig_122:60573..66421- (Tribonema minus UTEX_B_3156 )
ATGTGCGGCGAGCACCTCACGTACGGCGCGGTGATGGCGCTGCCCGGCGT
AGTGCGCGCCGTGAGCGCGGCGCGACTCGTCATGGAACGGTCCCCGCACG
CAATCCTGTGCGGCGGCGGCGCGCGCGACTTCGCCGTGGCGAATGGGATG
GCGCTGGCAGAGGCGCTGACGGAGGGTGCCGCGGCCGCGTATTCGGAGTG
GCGGCGGCAGAGTGACACTTCAACGGACACAGCAGGGGCAACCGTGTCAG
TTGAGATTGACGCTCCCCACGACACCATTGGCATGATCTGCCTGGATGTC
AATGGTCATCTTGCGGCGGGCACCAGCACCAGCGGGTGGCCCTTCAAGCA
CCCGGGGCGAGTGGGTGACTCCCCCGTCATTGGTGCAGGACTGTACTGCG
ACAACGACGCCGGCGCCGCGGTAGCCACAGGCGATGGTGAAGAGATCTTA
CGAACAAGCGCGGCATTCTATGCCGTGGAGCTTATGCGCGCGGGTCACAC
GCCGCAGGCTGCATGTACGAAGGCGGTGGCACGGATCGTTCAGGCGAGTG
CGGCATGTTCCACTAGTGCTGCCGCCAGAGGGCCGCGCGCAGACAGCCGC
ATGCACTCAAAACTCACCGTTGCGGTGCTAGCAATGAGCCCCAAGGGGGA
GGTGGGGGCTGCCTCATCACTAGGCCCTAGTAATGTACATAGAGGGCGGC
CCGTGTTCCCCTATGCGTTGTGGCGCGGCGGCAGCCAAGGGGAGCTCGTT
GAAGAGCAGAAACCCCCTAATGATGACCTGACTTGA
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