mRNA_13758 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A836CCM1_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM1_9STRA) HSP 1 Score: 932 bits (2408), Expect = 0.000e+0 Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 1
Query: 1 MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL 1836
MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL
Sbjct: 1 MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL 612
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI) HSP 1 Score: 281 bits (718), Expect = 4.050e-78 Identity = 210/603 (34.83%), Postives = 287/603 (47.60%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSV-------EQYVPSS--------------PVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTW------RAK-ETPAQPSKGGAPSP-PSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKAS---------------SPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAE-------------------LDGVGEARR------ARVHFDDFDARWDEGFDAAAWGEGKLAP 1653
GN+CYLNSA+QCLSHTP++RAYLLS M +EVN NPLGTQG+LVE+ ++LL+ LWS +YLC+ P KFKR L ++K QFAG +QQD QEFLA +LDALHE DVNRV+ KPYV APDD A ++ A +AW+RHV RNRSVIVDLFQGQLKMEC+C+ C K SV+FDPFM+LSVPIP R++K VAV+++ R+R R V E +S PV++G LPRL ++ L AL+++ G+ + ++ +A + + Q +KV + L +R++ ++VA E RAK T A +P P P+ P K +A A + + P ++ ST A SP L+ G ++ + +D ++ EA +++PT + G RLDALD +G WY+ TV E L G GE ++ RVHFD F +RWDE + W E KL P
Sbjct: 1007 GNTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHE-----------------------------------------------DVNRVIDKPYVAAPDDDDDAESGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKMVAVVMLPRIRTRYLVRSSGLNGEDGAMASDGGGAQFSNPRQLVPVQYGMMLPRLGELSDLKRALSDLCGIPTVSIVVAILQQNQ-IKVMQDKELLTELRDDTWVVALEMQGEINLNRRAKPSTSASRQATVSPVPTPTSSGPTKPEAATAAGXXXXXXAALSEEELPVGTEAEPTEPSNTTSGTPAPNVVVPVENGGSTTAAKGEGGAAESAEEGQGVSPEPLKETLKEGLGVPETAAAEARSDGSEDEEAEETDLDNDRPPTSTPDNRTPDERCMSSFPTRLRDLEIGWRLDALDGQGGWYAATVVEINPRAKALDRGGDKPSKASLSGKGEDQKRKTEYLVRVHFDAFTSRWDESYGEQEWREKKLQP 1561
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: F0YH03_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH03_AURAN) HSP 1 Score: 256 bits (653), Expect = 1.270e-71 Identity = 147/339 (43.36%), Postives = 198/339 (58.41%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSS--PVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPS 1068
GN+C++NSALQCLSHTP+LRAY+LS +E+N +NPLG+QG++V+E + +L+ LWS Y V P KFKR+LAR K QFAG DQQD QEFL +LD LHE DVNRV+ KPYV PDD +A + A DAW+R++LRNRSVIVDLFQGQLK E +C CGK SV F+PFM LSVP+P +K R++H S ++ FG ++PRL +VG L +AL+EV G+ +A+ DV+R + ++ + + LA +R++D +VAYEK+ E P + G PS
Sbjct: 92 GNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANVLRMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHE-----------------------------------------------DVNRVVEKPYVEEPDDDDVAKLTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFMHLSVPLPSTQEK--------RLKHAASKKRPGEKQLRAAIFGVSVPRLGEVGDLKSALSEVTGVPRADIAVGDVYRHRFARILEDDEPLAAVRDDDVVVAYEKS----EAPPSATAGKRPS 371
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A7S3Y0Z1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z1_HETAK) HSP 1 Score: 216 bits (549), Expect = 1.500e-62 Identity = 124/281 (44.13%), Postives = 164/281 (58.36%), Query Frame = 1
Query: 187 LVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAK 1029
+VEE + LL QLWSGD+LCVLP +F R+LA+ K+QF G +QQD QEFLA +LDALHE DVNRVL KP VPA +D + ++ + W RH+LRNRSVIVDLFQGQLK+E C C K SV+FDPFM+LSVPIP + DK V V L+RR+R E +P+ R+G LPRL ++ L AL+ + G+ + L++ DV+R + KV+ LA++RE+D LVAYE+T R +
Sbjct: 1 MVEEFAGLLAQLWSGDFLCVLPARFCRALAKCKTQFGGNEQQDAQEFLAEMLDALHE-----------------------------------------------DVNRVLRKPAVPALEDHEVEGKSDRALSRLFWERHLLRNRSVIVDLFQGQLKVEVTCPHCRKRSVNFDPFMYLSVPIPSQGDKAVEVTLIRRVRRGAPPEALMPT---RYGLLLPRLGEIADLKKALSALCGVPKEQLSITDVYRHKFHKVFSDSEPLALLREDDVLVAYERTRRRR 231
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.290e-58 Identity = 144/393 (36.64%), Postives = 192/393 (48.85%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMR------HRDSVEQYVPSSP-------------------------------------------------------------------VRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKT 1017
GN+CY+NSALQCLSHTP+LRAY+LS EVN +NPLGTQG++VEE +++L+QLWS Y + P KFKR+LA+ K QFAG DQ D QEFLA +LD LHE DVNRV+ KPYV PDD + + + A +AW+R++LRNRSVIVDLFQGQL E C+ C K S+ F+ FM+LSVP+P D+ V ++L+ R R V P+S V++ F +PRL V L A+A+ +G+ + L + DVFR + +K++ LA + +EDFLVAYE T
Sbjct: 825 GNTCYINSALQCLSHTPLLRAYILSEGYSGEVNRTNPLGTQGRMVEEFASILKQLWSEQYRYIAPNKFKRTLAKLKPQFAGNDQHDSQEFLAEMLDMLHE-----------------------------------------------DVNRVVEKPYVVEPDDDEVDKLTSIDAAREAWDRYLLRNRSVIVDLFQGQLMSERTCAVCSKRSLKFETFMYLSVPLPAPRDRLVKLVLLTRAEGSKLDLSRLEVPTNRPASTAISVDMPPDNGAISDKTTEINASKIEKRSSWSAMLSKPIEKNETSEEDKSIALNGALLQPKLVVPRVVKYVFEIPRLGTVAELKKAIAKRSGIAASDLVIGDVFRHRFIKLWHDTEPLARMADEDFLVAYEST 1170
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A2G9RJ31_LITCT (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ31_LITCT) HSP 1 Score: 184 bits (466), Expect = 9.280e-48 Identity = 108/323 (33.44%), Postives = 163/323 (50.46%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPD-----DAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 1011
GN+C++NSALQCLS+TP L Y L+ + E+N NPLG +G++ + L++Q+WSG++ V P FK + R QF+G QQD QE LA +LD LHE D+NRV KPY+ D D+V+A +AW+ H+ RN S+IVD+F G K C EC K SV+FDPF +L++P+P R D+ + V LVR H P ++ +P++ V L AAL++++ + ++ + + DV+ + K++ + L+ I E D L YE
Sbjct: 108 GNTCFMNSALQCLSNTPPLTEYFLTDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLELKDADGRPDSVVAK--------EAWDNHLRRNNSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVRSDPH---------CKPTQYRLVVPKMGTVSDLCAALSKLSDVPAENMVVTDVYNHRFHKIFQVDEMLSHIMERDDLFVYE 366
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A0D2WIT0_CAPO3 (USP domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIT0_CAPO3) HSP 1 Score: 189 bits (481), Expect = 2.270e-47 Identity = 111/318 (34.91%), Postives = 164/318 (51.57%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 1011
GN+C++NS LQCLS+ L +Y +S+ +N NPLG +G++ +E AL+++LWSG + CV P FK++L +QFAG QQD QEFLA +LD LHE D+NRVL KPYV + + E A +AW RH+LRN+SV+VDLFQGQ K C+ C K S++FDPFM++SVP+P +++ + V R + +P VR T+P+ + + L A + E+ + S +L + D F+ +V + + I E D +V YE
Sbjct: 470 GNTCFMNSGLQCLSNIAPLTSYFVSNAFVDHINRDNPLGLKGKMADEYGALIRELWSGKFDCVAPNSFKKALGSFATQFAGYSQQDSQEFLAFLLDGLHE-----------------------------------------------DLNRVLKKPYVEKVESTSTDNLEE--VAQEAWRRHLLRNQSVVVDLFQGQFKSTVICTTCNKVSITFDPFMYVSVPVPVSNERVIVTHFVPR-------DTQLPV--VRMNVTVPKTANLPILRAKMGEMLKVPSSSLVVVDHFKSYVFRVLADDMDVREISESDEIVVYE 729
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A8C4XDV7_ERPCA (Ubiquitinyl hydrolase 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4XDV7_ERPCA) HSP 1 Score: 189 bits (479), Expect = 3.890e-47 Identity = 111/320 (34.69%), Postives = 165/320 (51.56%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 1011
GN+C++NSALQCLS+ P L Y L +E+N NPLG +G++ E + L++Q+WSG + V P FK + R QF+G QQD QE LA +LD LHE D+NRV KPY+ D P++ A +AW H LRN S+IVD+F G K C EC K SV+FDPF +L++P+P + D+ + V LVR D + S P+++ +P+L V L +ALA+++G+ ++ + +ADV+ +C K+Y ++ L I + D + YE
Sbjct: 326 GNTCFMNSALQCLSNAPPLTEYFLEDKYEAEINRENPLGMRGEIAEAYADLVKQMWSGRHSYVAPKTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLALKD-----AEGRPDEIVAKEAWTNHRLRNNSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRT----DPL-----SRPMQYRVVVPKLGSVADLCSALAKLSGVSAENMVVADVYNHRCHKIYRSDEGLNHIMDRDDIFVYE 584
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: UPI000854F5AC (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 4-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854F5AC) HSP 1 Score: 177 bits (449), Expect = 9.940e-46 Identity = 108/319 (33.86%), Postives = 162/319 (50.78%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPD-----DAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFL 999
GN+C++NSALQCLS+TP L Y LS + E+N NPLG +G++ + L++Q+WSG++ V P FK + R QF+G QQD QE LA +LD LHE D+NRV KPY+ D D+V+A +AW+ H+ RN S+IVD+F G K C EC K SV+FDPF +L++P+P R D+ + V LVR S Q P ++ +P++ V L AAL++++ + ++ + + DV+ + K++ + L+ I E D L
Sbjct: 27 GNTCFMNSALQCLSNTPPLTEYFLSDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLELKDADGRPDSVVAK--------EAWDNHLRRNYSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVR------SDPQ---CKPTQYRLVVPKMGAVSDLCAALSKLSDVPAENMVVTDVYNHRFHKIFQVDEMLSHIMERDDL 281
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: UPI00109BF127 (ubiquitin carboxyl-terminal hydrolase 4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BF127) HSP 1 Score: 183 bits (464), Expect = 1.500e-45 Identity = 112/321 (34.89%), Postives = 160/321 (49.84%), Query Frame = 1
Query: 58 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALA-EVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 1011
GN+C++NS LQCLS+T L Y LS ++E+N NPLG +G++ + + LL QLWSG Y V P FK + R QF+G QQD E LA +LD LHE D+NR+ KPY+ D P++ A +AW H+ RN S+IVD+F GQ K C EC K SV+FDPF +LS+P+P + ++++ VLL+R D +E+ P F ++P++ + L+ AL E A L L + DV+ + KV+ + SL I E D + YE
Sbjct: 298 GNTCFMNSGLQCLSNTMRLTKYFLSDQYKAELNFDNPLGMRGEIAKAFADLLSQLWSGQYSSVAPRSFKMQVGRFAPQFSGYQQQDSHELLAFLLDGLHE-----------------------------------------------DLNRIKKKPYIEVED-----ANGRPDEVVAQEAWESHLQRNDSIIVDIFHGQFKSTLVCPECEKVSVTFDPFCYLSLPLPVKKERYLEVLLIRD----DPMER-----PTEFKVSVPKMGTISDLVNALCKEDASLQKDRLIVCDVYNHRLHKVFKSRDSLTQILERDDIFVYE 557 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349457 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13758 ID=mRNA_13758|Name=jgi.p|Trimin1|349457|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1837bp|location=Sequence derived from alignment at Contig_43:626081..640351+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTback to top protein sequence of jgi.p|Trimin1|349457 >Trimin1|349457|estExt_Genemark1.C_Ctg_430048 ID=Trimin1|349457|estExt_Genemark1.C_Ctg_430048|Name=jgi.p|Trimin1|349457|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=612bp MLLLLLLLLLLLLLLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEback to top mRNA from alignment at Contig_43:626081..640351+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13758 ID=mRNA_13758|Name=jgi.p|Trimin1|349457|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14271bp|location=Sequence derived from alignment at Contig_43:626081..640351+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_43:626081..640351+ >mRNA_13758 ID=mRNA_13758|Name=jgi.p|Trimin1|349457|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1836bp|location=Sequence derived from alignment at Contig_43:626081..640351+ (Tribonema minus UTEX_B_3156 )back to top |