mRNA_13736 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349446
Unique NamemRNA_13736
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 1.650e-143
Identity = 222/257 (86.38%), Postives = 224/257 (87.16%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRA RAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTT C+LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:   84 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRALRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTFCYLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 340
[Close]
BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.070e-141
Identity = 224/257 (87.16%), Postives = 226/257 (87.94%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  209 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 465
[Close]
BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 1.790e-131
Identity = 223/300 (74.33%), Postives = 225/300 (75.00%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYP-------------------------------------------SMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYP                                            MFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  261 QDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 560
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835Z031_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z031_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.790e-125
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 
Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835ZEP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.320e-123
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1 
Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182
[Close]
BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835ZA29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA29_9STRA)

HSP 1 Score: 320 bits (821), Expect = 8.240e-108
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 1 
Query:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYT 489
            MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA  T
Sbjct:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTT 163
[Close]
BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835ZD50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD50_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.270e-98
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 483
            QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR
Sbjct:  104 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 251
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835ZIG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIG4_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.530e-54
Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q            W   H++K V G    +  SL       PTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +   L+ +Y +LL VA+QDGT HC +
Sbjct:   26 QDQVERANEFGLDVIMQ------------W---HFMKNVKG---KLLSSLGAAWEATPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVVPVLRIMYSSLLDVAQQDGTLHCLR 203
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A835ZDE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.930e-54
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+L LGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  200 QDQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILILGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 367
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BLAST of jgi.p|Trimin1|349446 vs. uniprot
Match: A0A836CNV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.510e-53
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 1 
Query:   43 DQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            DQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  339 DQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 505
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349446 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835Z0Q7_9STRA1.650e-14386.38SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CA74_9STRA1.070e-14187.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7W2_9STRA1.790e-13174.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z031_9STRA2.790e-125100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZEP9_9STRA1.320e-12398.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA29_9STRA8.240e-10897.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZD50_9STRA3.270e-9899.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIG4_9STRA1.530e-5452.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDE2_9STRA6.930e-5452.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV1_9STRA7.510e-5352.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_43contigContig_43:261556..266570 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349446|estExt_Genemark1.C_Ctg_430024
Hectar predicted targeting categoryother localisation
TranscriptId349768
TrackFilteredModels1
ProteinId349446
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349446gene_13736Tribonema minus UTEX_B_3156 geneContig_43 261556..266570 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349446Trimin1|349446|estExt_Genemark1.C_Ctg_430024Tribonema minus UTEX_B_3156 polypeptideContig_43 261556..266569 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13736_1exon_13736_1Tribonema minus UTEX_B_3156 exonContig_43 261556..261597 +
exon_13736_2exon_13736_2Tribonema minus UTEX_B_3156 exonContig_43 262631..262678 +
exon_13736_3exon_13736_3Tribonema minus UTEX_B_3156 exonContig_43 263879..263962 +
exon_13736_4exon_13736_4Tribonema minus UTEX_B_3156 exonContig_43 265754..266061 +
exon_13736_5exon_13736_5Tribonema minus UTEX_B_3156 exonContig_43 266332..266570 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13736CDS_13736Tribonema minus UTEX_B_3156 CDSContig_43 261556..261597 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13736UTR3_13736Tribonema minus UTEX_B_3156 three_prime_UTRContig_43 266570..266570 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13736 ID=mRNA_13736|Name=jgi.p|Trimin1|349446|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=721bp|location=Sequence derived from alignment at Contig_43:261556..266570+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCTG
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protein sequence of jgi.p|Trimin1|349446

>Trimin1|349446|estExt_Genemark1.C_Ctg_430024 ID=Trimin1|349446|estExt_Genemark1.C_Ctg_430024|Name=jgi.p|Trimin1|349446|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVK
MVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKY
LNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCH
LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLV
ARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
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mRNA from alignment at Contig_43:261556..266570+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13736 ID=mRNA_13736|Name=jgi.p|Trimin1|349446|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5015bp|location=Sequence derived from alignment at Contig_43:261556..266570+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGTGAGACG
ATTTGCGACAGCACCCTTCGGGACTGCTGCAGCAGCTGTTGCTGTCTGTT
TTCATACATCCTGCTGCGGCACTCGCCACGCAGGAGTTCGCCACGCAGGA
ATAGCCGTCGTACACCTTCGCGTATCCAATATTGCGCGCCAGCCTGCGTT
CAACGTTGCTGCGACACCAGCCCATCATCCTGCTCCACTTCTACTCGTTG
GCAGTTGGTCCCACAGTAATAATACAGCCCTCACCCGCGTTCGGCGATGT
CTGACATGTCTGACACGGCCTCCTCGTTGCTCGTGATGCTTTCAATATTT
ATGACACAGGTCATTGCGGAGCTGCTAAACAGACGCTTCAATACTTCACA
GGAAGCGTTGAGCGCAGTCAAGCCATTGGCTGCAGCTGCTGGCTTCGTCG
CCTTAATGAGATCAAAGCATGCCAACAGCTACGACATCTACTGCAACCGT
GCGGGAAACCCCCTGTGAAGCGGTCAGATCAATGCCCAGATGTCAAGGCT
CGGTCAGTAAAGCCTTGCATCAGGTGCGAGTGGCGGTTGAAAGTAGTGCT
TGAAACCTCTGTGGAGAACTCACAGCATGCCAACATTGGCCCCCAGTGGC
GTGTGAAGCTACCGGCCAACAACACCCCATGCTCCTTCAGGGAGGGCCAC
AACCATGACTTTGCCGTGCTTGCGGGATCACCACCACCATCTAATGCTGG
GCGCATCATCACCAAAGCAGAGCTCACTGAAGAGATCATTTCATGTGTGC
AGGCCCTGTGCGTTGCGCCCAACATGCGTGGCAAAACGCTGCAGCGTGCT
GTAGTCAGCCTGTATTTTGGTGGTGACTTTGCTGCAGTCTTTGACCAGCC
TGCCCTTCATGTGCTCAACAACACGGCAGCAAAGGTAGCAGATAGAATTG
CCTTCACAACAGGTGACTGCCAGGAGTTCATCAAACAGCTCGGCGCAGTG
CAGAAAGCTGGAGGATACGCGGAATACGAGTTAGCGGACGACTGCTCGTT
CAAGCGTGCTTTCTGAGCGACCCAGGACCAGGTTGAGAGGGCGATGGAGT
TTGGCTTGGATGTCATTCAACAGGTATGCACCTCTGTGTTTTGGCTTTAG
AACGGTGCAGATCCAAGCAGAATGGGGCAATTATCCTCGCCGTCAAGTGC
CCGCTACCAAATAGGTTGCAGTATTTCTGGCTTGGCCCGCCATTGCGATG
AATTGATCATGGCTCGGTACAAGTCAACTGCAGTACTGCCAGAGACAAAT
ACTGTTACAGTGTGAAGGTGGCAAGTACCTTGCACGATGCCTTACCAATA
CAAGTAGTGGCGCAAGCATTCCTATGCAGCATGAATTGAATAACTTTGTA
TCTTTCTTTGCTTGCTTTTCATCATGCAGTTGATTCCAATGAAAAGAGAT
GACTTTGATGATGTCCATTCATTGTTTACCCGCAACAGCAACACCAAGCA
GCAGCTTCAATACTAATATGAATGCCGCAATTGAAATGATTTTGTATACA
AGGGTTAACAGCAAACGCCAGAAATAGTGCCTTCATCATATCTTGAAGTT
GTGAAACTCGTGCATTGCATGCCTTTGCTCTTTTTACCGCGCGGAGCAGG
TTTACCAACAGCTTTCTTCTTGCCCAATCGACCTTTTCATGACATGTGAT
CAGGAGTTTGTTGCTTTACAAACAAACTGAACGAGCACTTTTCAGTATCT
GATGATAATGATAGCTGGACGTGCACTTCAAGTTCTTGGAGTATGTGTAC
GGGCGTAATCACTTTCTGGAGCTGCTGCTGGAGGACAAAAAACGTTGTGA
GCCTTGTGGGCATTAGAAGTCATGGCAAATACGTGTGCGTAATCAATCTC
ATAAATTATTGTAAATGAGAATCAATTTGCATTTGGCGCCTGAACTCGTG
GCCAGGATTGTCATGTCTTGTGGTTCGTTGTCATCATGCGACACTTTGTT
GCGTCACCTGCCTGTCACCTGCCTGTGCTCACTGTATGGATTGCAGGACT
GCACTTTTGGAACGAACAAATATGGGCTGGCGCTGAGCATCATCGTTGGG
GTCAATGGTGACAGCAAGTAAGTGTGTTCTTTCAAATTATTTGCATGCAC
CTATATGGACAAGATGTGATGTAATCTGTGCTTTGGTCATATTGTACAGG
GCTTTGTGTCATGCTGTGCAATTACAGGCTGCATCACCTATCATGTTCAT
GTTCACCGGTGCTGATCAAGATACAATTCTTTGTGCTTGTCTGCGTGTTT
CCAGGACGCGAATGTTTTGCCAGGCGCTGCTGGAACGTGAGGACACGGAG
GCGTTTTCGTGGTTCTTTGTCCACTATGTGAAGATGGTCGGCGGCCACTA
TCCGTCCGTATGTTTCACAGACAGGTACGCCAATTTCAGGTGATACTGAA
ATTTAGTAGAGTGGGACGAGCACCTCTGCTGCTTCAGCAATTACCCTCTC
TATACTGTGCCCAGCAATGATGTTGCGATAACTGTGTCATTGCTGGATTT
TGTGTTCGGTTGCAGAGATGCGGCAGCGGAGGCAGCCATGACCTTGGCTT
GGCCTGGCACTGTCCATCTTATCTGCGAATGGCACTTCTTCAAGAACATC
AAGGAGATGCTGAAGGGGAAGCTGGGGGATGCTTGGCAGGCAAGTCAGCA
TTCGTTCAAGTCCATGTCTGTTATTGGCAAGGTTATCAAGTCGAGCCATA
GGTGTGAAAGCTCAAGCATGTGAACGGAATCAACAGTGTAAGTATGCTGG
ATACAAACTTTACCAAGAAGCTAGGCACATCGCAGCACAGGAGGTGCGCA
GATGTCTTGTGTCATATGTTGCCCTGTCTGACTAGGTCCACCTCGATTAT
TGTGCGTGTAGGTTGTGCCTGCACATTGATGTGGGTCGCTTGCACGCCAT
GTGTACAGTCGCTCAATCAAATACCATGTGCGTCTGCGGTGGAGGTTTCA
ATGTGCAATGCAGAGCGAGTAGGTGTTATCATTATGTACAGAAGATGATC
TCTGTGCCAAACGTATCGACACTGCGCTTGTAGGTTTCTCAAGGTACGGT
TTTGAGGCCTCTGCCAAGCATGATTAGCAAAGCAGCACAGCCATACCACA
AAGCACGTGTCCATGAAGAAGTGTCCTGCAGAAGATGTGATGCAGTCCAC
TAGCATGGTCTGTGCGGACAAAGCAGTAGCGCCTTTCTGTAGCAGTTGTG
AAGAAGCTGGCATGTGTCAGCCAAGCTGCTTGTGCACCTTTGCATTGCCA
ATGTGTATGTACGTAGTAGTAAAGTCTTCAAGCTCGCAGGACTGACGAAG
AAAGCTATGCTCATGCACACATGCTCACAGTTATGACGGAGCTGGAATAA
GAGCGGCGTGGTGGGCTTGTGTGCTATCGTCCACCTTGCAATGTCACAAA
AGCTTTCAGTGTGGGCTGCGGCGCTTGCACACAGGCATACATCACACCAT
TTGCAGCTTTCATCAAGCAAACAAGGCGGGACAGCACATAGTGCATGCAC
GCATAAAATGCCAGGTTGACTTGTGCATGCTGCATGCAGTAAGTAGTATG
CTGAAAATGCGGTGTCACCAAACCAACAACAATAGTTACCTGCAGGCCTC
GCTCAGCCCAAACGCAAGCTTGCAGTGCAAATGAATTCAAGGCACTTGTG
CTATAGGGAAGATCACTCTGTCAGTCTGAGTTTATTGAAGTTGAGTACTA
TTATGGTATTGGCCTGTCTCATCCGCTTCGGTCAATCACTTGTTGGTCGA
ATCTAGTTCAACTGCAATTGTGAATGTTCTGCAGTGATATTGGAGTTGAG
GTAACTTGAGATTAACAAAGAAATGGCGCAAGTAAAGTAAGATATCACAC
AAGCAACCCGTTAGGCGCAAATATGGGGTGCAATCACACAAAAATGCATA
TTTGGGATTACTCAACCACCCAGATATAATAATACATACATGCCATACAT
GCTTGAAGACATACTACAGGATTGATATCAACTTCAACGTTGCAGTAGTC
AGCAGGTGACAACGGGCGACATGTGACATTACCTAGCTTCAATGATACTT
GGCATTAGGGACCGTACATAAAGCAATGGTCTAGGTCGCATTTGCGCTTT
CAGGGTGCGCAATTGGTCTGACTGAGGCCTCTTCCTTGATGTTCGCAGAT
GTTCAGGAGCCTTATGCAGCGCGCATCGCGTGCTCCTACGGAAGCCAGTT
TTCAGGGGGCGCGGAAGGGACTGTTGGACGCCCTAGTGGATGCTGGCGCC
AGCGATGACGATGTCATGAAGTACCTCAACGACACGATCTACCCCATCCG
GGAGCGCTGGGCATTCTGCTATCGCCTTGGCGTCCTCACCCTCGGCATCA
ACTCTACTCAACGTTGCGAGGGGTACTTTGGCATCCTGAAAGCGGAACTG
TTGAAGGTCACCACGCTCTGCCACCTGAAGCAAACGCTTGAAAATATCAC
TGCCAGGTAAGAAACCGGCTGCTACAAGCGGATAATCATCTGCCTTCCTC
AGGGTGTTGCTGCACGCGTTGGTCATGGCCAGATATCACAGTGCACTGTG
CTCAGTGACTACAGTTTAAAATGTTTGTATACGCGATGCTCTTTTGTGGA
TCAGGCCGATGCTAGTGAAATCCAAAATCTCATGACATGTCATATCTGTT
TCATTTGCATGTGTCCTTTGATTACCTGTACAGAAGTGGTTTGACTCCGC
TCACTTCGATGCCTTTGTCGCTCTAGGTACACCTCGGAAGATCATCTGTA
CATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGGAGGGCA
TGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTGGCGCGG
CAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGTGCGGTC
TGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGCTGACCG
TGAACAGCGATGCTG
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Coding sequence (CDS) from alignment at Contig_43:261556..266570+

>mRNA_13736 ID=mRNA_13736|Name=jgi.p|Trimin1|349446|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_43:261556..266570+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCT
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