mRNA_13722 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A836CBW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW2_9STRA) HSP 1 Score: 1608 bits (4163), Expect = 0.000e+0 Identity = 947/947 (100.00%), Postives = 947/947 (100.00%), Query Frame = 1 Query: 1 MADDLLWMVMVTATHHLLVLQSDAAMRSVTTSKXXXXXXXXXXXXIPMLVLVAVFLHHCTVEIVHMIYTTGYASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHTPTAHDKSLPLLPLLLLXXXXXXXXXXFSLGHRLTHDTSWLLLRPPLRLPLCGFVDGARGGGGDAVR 2841 MADDLLWMVMVTATHHLLVLQSDAAMRSVTTSKXXXXXXXXXXXXIPMLVLVAVFLHHCTVEIVHMIYTTGYASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHTPTAHDKSLPLLPLLLLXXXXXXXXXXFSLGHRLTHDTSWLLLRPPLRLPLCGFVDGARGGGGDAVR Sbjct: 1 MADDLLWMVMVTATHHLLVLQSDAAMRSVTTSKXXXXXXXXXXXXIPMLVLVAVFLHHCTVEIVHMIYTTGYASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHTPTAHDKSLPLLPLLLLXXXXXXXXXXFSLGHRLTHDTSWLLLRPPLRLPLCGFVDGARGGGGDAVR 947
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A835YWI5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI5_9STRA) HSP 1 Score: 317 bits (811), Expect = 1.650e-88 Identity = 305/917 (33.26%), Postives = 396/917 (43.18%), Query Frame = 1 Query: 223 QGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSK--GKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIM---------------------GVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVV---------------------------SIRDHGRGIPLHEGHRLFGQFAQLNNQSNLP-----SSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPP---------------------------------------------DGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHTPTAHDKSLPL 2673 Q YNILK A+ + A + +T +R LE V+ERTAELLQ+NR+LQ+V++A+QAS+TA+MIT + +VW+N A+A LACC D A A +G GA + ++ G D R S V + T G V + VE+S +P+HLG HH+ I RD+TA R+ Q+A+ AEREALA++VKT T+QAL+H+LRTPLQ ++ G+TST+LMDM+P+ D ++ LL+ VMASSRLLLTLINN+LD+R++ET ++ FE+ P+E+ L DA DFC PFA +N + + +PA + N LRLQQV INLLSNAIK+ V ++ R TR A+A+A AAL P + GD+SA A + D G G+P E HR+FGQF QL N VGQPSG+GLGL+LCL FVR M GHIWA N APP +P EP + + G L +A P XXXXXXXXXXXXXXXXXXXX DDSIINLKVMRHML ++ V + C S AAALE + +A P E RF +V TD+QMPDMDGY L+ L L PR++GLTADT E A CL GM V++KP + + M L P +PL Sbjct: 289 QCGYNILKAGFFAAVGFLSAGALRTQTGLRESLEGLVQERTAELLQRNRELQVVDMAVQASETAVMITDAEHRIVWANRAVAALACC-------------------DIAAA------KGRRFRDLFRFEGLEGGAEAAEAALTIGPDERSASAEVHAV-------------------------------------------------TWAGDNVTLAVEVSRVPDHLGHGHHLKIMRDITAVRQMQDAKTRAEREALANKVKTETVQALNHELRTPLQILLSMETXXXXXXXXXXXXXXXXXGITSTMLMDMTPETDDKYNLLMTVMASSRLLLTLINNMLDMRKMETANMGRFELERTPVERCLRDAIDFCLPFAMLNEVKVD---------------MAMADAPA-GVHAWANPLRLQQVAINLLSNAIKYTGVGTRVTVTIRVTTRKRAMADARAALCSDLSH---------------------PELDAGDTSAPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFADEGGGLPPSERHRVFGQFLQLGNSGAAALRGGAGGGVGQPSGTGLGLSLCLRFVRRMRGHIWADNL--APPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAVPREPPVPVPTAQRGSLSLAALEPSPX---------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSIINLKVMRHMLSKIGV-ACEVCGSAAAALERLRADAALPPEARFEIVFTDVQMPDMDGYGLASALMELPLDPRPRLIGLTADTAPETTARCLSSGMDSVLHKPCSVSQMREVLGAAPPDMASPVPL 1058
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A1E7EU01_9STRA (Two-component system sensory kinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU01_9STRA) HSP 1 Score: 214 bits (546), Expect = 6.730e-54 Identity = 231/822 (28.10%), Postives = 346/822 (42.09%), Query Frame = 1 Query: 217 ASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIA-----VMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHA--CVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLP---SSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALN---LSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHT 2643 A + I K A + + + AT A Q E D+ LE V+ RT E+ +KN L +V LA++AS+TAI IT ++ +W N A CE + N+ ATA +SK ++ G+ + K + G ++ ++ G +V + AL + E + A + E G N ++ + +++TA+R +EA +A+ EA+ ++ +M L+H+LRTP+QGIMGVTS LL + + + ++A +MASS LLL LINNLLDV+++ + + SF M+ V + D DFC+P A ++ V+ N LRLQQV+INL+SNAIK+ + C+ I MT + + A A+ + + G + D S + V+ SI D G GI H+ RLF +FA+L+N+ + +GQPSG+GLGLNLC F+ M G IWATN + +G G+ FSFFL ++ + P S AP + +NN S +D + + ILLV DD +IN KV+ M+ + + + SG AL E KN GP + LVI+D+QMP M G E + ++A LS P VVGLTADT + +C GMS V+YKP + M F T Sbjct: 296 AQEKLIAITKAAFIACVGVGATGAFQNEIDLNERLEVLVQNRTKEIQEKNDKLHMVELALRASETAIAITDSNLRFIWLNAA----------CEEIST------NNIDAAATA----------------------------ASKIAPTKGGAISTGKKIQGQ--------HQVSSQSFLGRTIVEVL----------ALETILDEKKLTR-AFASHRREXXXXXXXNGSNRYLVVFKNITAERAREEAERTAQEEAMLAKAMEDSMVTLTHELRTPMQGIMGVTSMLLQENKKKDEKQTDTILAESLKLIMASSGLLLNLINNLLDVKKVNSEMMDSFPMSSVIARSAIKDTIDFCQPLASISGVSVVTDYGNGRKNDFM---------------VVSNALRLQQVLINLVSNAIKYTEEESQICIRIRPTIMTDVEYMIDHA--------------------LASSRDDNSNDGVSKKDLSLSNHS--------VLCFSISDCGPGIAPHQADRLFRRFARLDNKPTRALGGGNKIGQPSGTGLGLNLCQLFLHRMNGEIWATNNS------------------NGRGSTFSFFLPLAID-NNPNIDSRITAPVEM-------------------SNNRCRSFEDLSLTT-SQLRILLV----------------------------------------DDVLINRKVIGRMVKLIGIVDIVTVDSGENALIELFKN--GP----YDLVISDLQMPGMSGTELCEAIMADTNGCLSRKPVVVGLTADTSVKVAENCSVAGMSAVMYKPISVIEMRDFFGKT 926
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A7S3LD79_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD79_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.270e-53 Identity = 226/824 (27.43%), Postives = 337/824 (40.90%), Query Frame = 1 Query: 217 ASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISP-IPEHLGRN----------------HHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQS-NLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLAL-NLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAF 2631 A+ G + I+K L+ A + A + + L+T+V+ + L +V LA+QAS+TAI IT ++ ++W+N A+ R+A K D+ +C+ LL T V E +++ V Q ++ +V+ + + VVVQV +SP IP R I + +D++ R + A AE+E L ++ T +M+ L+H+LRTPLQGIMG+TS LL D+ D L + + ASS LLL LINNLLDVR+L + F + P+ ++DA DFCRP A ++ + VP A + V N LRLQQVIINL+SNAIK+ + + +EI + E ++L A PS G + + +S+ D G GI + RLFG+F+ L+N +GQPSGSGLGLNLC SFV MGG++WA N ++ G G+ FSF+L D A ++A HSA ++ ++ G+ + + +L LVDD++IN KV ML ++ V + A SGA AL + + + LVI+D+QMP M+G E +K + +L P V+GLTADT CL GM DV++KP T M + Sbjct: 221 AAGGGFAIVKGTLIAAAGVVALGTFRSAKALNTSLQTRVDA-------QEDTLHMVGLALQASETAIAITTDEKEILWTNQALERIA--------------------------------------------------------KSVDTNGSTCS--SLLSQSITEVLAMENEDDLQLFKQCFDVNQS-------KEVEIVLKSQSSSSSSTRPVVVQVNVSPFIPSQRNRQGEKSLLSGDKRDNDRIRFIVVIKDISDNRAREAAEKLAEQETLRTKTLTESMETLTHELRTPLQGIMGITSLLLNDVRLPNDVNDSLNL-ISASSGLLLVLINNLLDVRKLNANMMKDFPLVPILPAGPMIDAADFCRPLAVVSGV-----------------NIRAVPGDAANTWVRSNYLRLQQVIINLISNAIKYTSTGSTIEIYSNIRSWEQIKIEMESSL------------------ATGGPIEPSTGHVVRNK--------------FLTISVADAGSGIIPDQAERLFGRFSMLSNSKLKRGPEFIGQPSGSGLGLNLCKSFVHLMGGNVWAANNSS------------------GDGSTFSFYLPVIQHEDTEAVAEQKVAI------------------HSALVVSTDTNQPSGEQRSSSFQYRVL---------------------------------------LVDDTLINRKVFLRMLRQIGVSNSRAVESGACALAVLR-------DESYDLVISDVQMPGMNGMELSKAIQDYTDLVKKPVVIGLTADTSERVEVDCLAHGMRDVLHKPMTVNDMKVY 840
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A448YUB9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUB9_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.090e-53 Identity = 228/850 (26.82%), Postives = 345/850 (40.59%), Query Frame = 1 Query: 148 VLVAVFLHHCTVEIVHMIYTTGYASQGRYNIL-KLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLACCRAPCEVVGMSPVQVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVE-----ISPIPEHLGRNH------HITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLP---SSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGT---PRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHT 2643 VL A++++H T E++ M + G +Q + L K + V + + +T A Q E D+ LE KV+ RT + +K+ L +V LA++AS+TAI IT +D ++W N AC VVG ++ + D R S S + + S G + L L + R+ + + NG + ++V +SP E NH + + +++TA+R + A +A+ EA+ ++ +M L+H+LRTP+QGIMGVT LL L +MASS LLL LINNLLDV+++ + + F ++ V + D DFC+P A ++ + + + +V+ N LRLQQV+INL+SNAIK+ + + + IS + + AL +P A+ + PV+ SI D G GI H+ RLF +FA+L+++ S+ VGQPSG+GLGLNLC FV+ M G IWATN + G GA FSFFL I + I+ + F + I+T + +VDD +IN KV+ M+ ++ V + + SG AL E +N GP F LVITD+QMP + G E + ++ T P VVGLTADT C GMS V+YKP + + F T Sbjct: 260 VLAAIYMYHVTCEMLSMTFD-GVGAQDMFRTLVKASFVACVGVASTGAFQNEIDLNEELEVKVKNRTRIIQEKSDKLHMVELALRASETAIAITDSDLRIIWLNA-----ACEEITSPVVG----RIAKNQEDKME-------------------------RPSASLQDRTSLLGKPIIEVLALDTIMDEKKLANAFSKNRREDEICM-------------------------NGMIYGLEVSPYNYYLSPTMESSSNNHTNDSSRFLVVLKNITAERAREIAEKTAQEEAMLAKAMADSMVTLTHELRTPMQGIMGVTGMLLHQKQNADAVTVESLKLIMASSGLLLNLINNLLDVKKVNSDMMDEFPLSSVVAASAIQDTIDFCQPLASISGVAVVT---------------DYGETKSQGYHVVSNPLRLQQVLINLVSNAIKYTSEESEILISIQPTVMSDVELKMENALACSRENLNNKIDIK-----------------------EPLASNT----PVLCFSISDSGPGIAPHQADRLFRRFARLDSKPTRVLGGSNKVGQPSGTGLGLNLCQLFVQRMDGEIWATNNST------------------GNGATFSFFLPLAASSSIETKVMAPISVTK----------------------------------QFHQFE-----------RTSIRTTQL-------------------RVLMVDDVLINRKVIGRMVNQVGVADIVSVDSGENALREISEN--GP----FDLVITDLQMPGISGTELCETIMLGKTCPTGRVPVVVGLTADTSVRVATDCKASGMSTVLYKPISVIEVEEFFETT 919
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: B5Y4A4_PHATC (Diatom histidine kinase 2 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4A4_PHATC) HSP 1 Score: 210 bits (534), Expect = 5.430e-53 Identity = 191/605 (31.57%), Postives = 271/605 (44.79%), Query Frame = 1 Query: 862 VQVEISPIPEHLGRNHH---ITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMD--MSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHAC------VEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQL--NNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLR 2637 + VE++P P +N+ + +D+T++R + A +AEREAL +Q +MQ LSH+LRTPLQGIMG+ S +L + + PD + V+AS+RLLLTLINN+LDVR+ + + F++ P L L DA FC+PFA + KL++ + V N LR Q++INLLSNAIK H+C + S ++ L + A + +P S + D PV VV++ D G GIP + R+FG+F+QL N Q+ + S VGQPSG+GLGLNLC+ FV M G IW TN P+ G FSF++ ++ D E S P S S +H +L I L + + V LVDD++INLKV+ ML RL V + +G AL+ L E F+LV+TDIQMP+M G E + + L L P +VGLTADT A C + GM+ ++ KP T + FL+ Sbjct: 326 MSVEMTPFPADAKKNNENRFLVALKDMTSQRARERAEKAAEREALIAQTMNESMQNLSHELRTPLQGIMGMASLVLDEPGLPPDVTESMSM---VIASARLLLTLINNMLDVRKCDASMLDEFQLTPFRLVSSLEDAITFCKPFAITSEV-----------------KLDLEINDD-EMEVESNDLRFPQIMINLLSNAIK----HSCSGDQVIIRASSMELSEAEQLVDRALVIAPG--------------------EPSSKAFRKED-------------GPVAVVTVTDQGPGIPFDQRMRVFGRFSQLTENVQNAIIGSKVGQPSGTGLGLNLCMKFVHRMNGRIWVTNN----PE---------------KGCSFSFYVHRVLQYDRMREVS-------------------------LPRTWSQS------------IHQVLRPVPRIPLTKEFRIV------------------------LVDDTLINLKVLSRMLSRLGVQKMATANNGKEALD------LLTTEDDFNLVLTDIQMPEMTGIELSLAIRKLPLKRQPLIVGLTADTSDAGDARCTQSGMATILRKPITTNQLHHFLQ 786
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: B7FXV2_PHATC (Ethylene receptor 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXV2_PHATC) HSP 1 Score: 205 bits (522), Expect = 2.940e-51 Identity = 181/598 (30.27%), Postives = 256/598 (42.81%), Query Frame = 1 Query: 895 LGRNHHITIARDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLP-------SSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQIAPWRLGGLDGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILLVDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXXLVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGTPRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFLRHTPTAHDKSL 2667 L + + D T+K+R ++AR +A+ ASQ KT MQ LSH+LRTPLQGIMGV ST++ D+S D L ++ASSRLLLTLINN+LD+ +++ + E++ +PL + D+ +FC PFA ++ + +V V N+LRL+++++NL+ NAIK+ + V IS R+ + A EA A SE A+ S S+ V V+S+RD G GIP ++F QF QL N S+ GQ SGSGLGLNL + FV M GHIW N + GA FSFFL PQ P P IQ AA F + +VDDS INLKVM+ ML RL V + SG AL+ ++++ + +L++TD+QMP M GYE K+L L +++ +AD SE A C+ VG +I KP T + L + ++K L Sbjct: 363 LSEDQYFITLSDYTSKQRAEKARVAAKIAETASQTKTEMMQMLSHELRTPLQGIMGVASTIIEDLSSDSSMLDSLR-TILASSRLLLTLINNVLDIGKIDANMMDMIELSDIPLSACIADSLEFCGPFAAIHD-------------------VSLVFQKEAEQFVSANRLRLEEILVNLVGNAIKYTMTNTKVTISLRKCSIEDAWKEARCAAASDLMFF----------------------SEEKLLEAETSLRGSN--IEVTVISVRDQGTGIPASSWKKVFSQFVQLENSKEKDRRYEGGSSAKAGQSSGSGLGLNLAMKFVTRMNGHIWFENRSP--------------------GADFSFFLANSKRRRSIESAKPQQPPM-------------------PPV------IQPQQAASFRTL-------------------------------------------IVDDSTINLKVMKQMLSRLGVQQILVAHSGKEALQYIKESS---KMHVPNLILTDLQMPGMTGYELLKQLRELKHFPQAKIMACSADWSSETEAKCVHVGFEGLIRKPITLTCLKEILSGIISENEKYL 825
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A7S3LB42_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LB42_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.080e-37 Identity = 165/586 (28.16%), Postives = 248/586 (42.32%), Query Frame = 1 Query: 148 VLVAVFLHHCTVEI-VHMIYTTGYASQGRYNILKLALVVALTITATMAAQKETDMRGVLETKVEERTAELLQKNRDLQLVNLAMQASDTAIMITGNDGTVVWSNTAMARLAC-CRAPCEVVGMSPV--QVFNHTSDCATANFKEGERGXXXXXXXXXGETWTGARCSPSSKGKDSRRGSCAVRKLLLGYATGVGMTSEELEMRTRDGALVVVQMRTRDGARRDGALVVVQFEMRTGNGALVVVQVEISPIPEHLGRNHHITIA-RDVTAKRREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPS---SSVGQPSGSGLGLNLCLSFVRHMGGHIWATN 1881 VL A F HH E+ V +++ A+ G Y +K ++ + + + + L+ VEER+ E+ ++ L +V LA+QAS+TAI IT + ++W N A R+A R C+ Q + D + A+ + G A SP D + G + + ++ RDG R DG + +T N + G +H +A +D+T R+ Q A + EREA+ S+ + +M+ L+H+LRTPLQGIMG+TS L+ D + + +L +MASS LLL LINNLLD+R+ + F++ P P Q + DA DFCRP A ++ L + A V + LR+QQ++INLLSNAIK+ V + R T AL Y Q V+++ + D G GIP + LF +FAQL N+++ + GQP G+GLGLNL F M GH+W TN Sbjct: 188 VLAATFCHHMWTELCVILLHPNTQANAGTYAAVKACVLAVAGLASVGTFSTNINEKNCLQALVEERSREIRRQEDKLLMVGLALQASETAIAITDSQKRIIWCNPAFERMAASARESCKCNNNQQQYPQKQHALFDRSIADVLQ--------LTVLDGSKLLRAFHSPGRHEDD--------------ISVGGSLYNVDVSPYLRDG-------------REDG-------QQQTANSC----DEQYHEAGNSNGIDHRYVVAFKDITEFRKLQSAEKAVEREAMMSKAMSDSMEVLTHELRTPLQGIMGITSMLIGDKTLPKA-ALDMLELIMASSSLLLVLINNLLDIRKCNADMMDEFQLTPSPSAQPMKDACDFCRPLAAISQVD-----------------LVLDLGDTEHAIVQSDSLRMQQILINLLSNAIKYTPEGGTVRLKSRTSTLPRVEEMMKNALATGAFVKDNMK---------YDHQN------------------------VLIIQVIDSGAGIPAGQEKLLFHKFAQLKNKADSNKRNGKTAGQPHGTGLGLNLVKQFTELMDGHLWVTN 676
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A1V0DH34_9BACT (Uncharacterized protein n=1 Tax=Rhodothermaceae bacterium RA TaxID=1779382 RepID=A0A1V0DH34_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 2.550e-17 Identity = 149/619 (24.07%), Postives = 231/619 (37.32%), Query Frame = 1 Query: 988 ASQVKTATMQALSHDLRTPLQGIMGVTSTLLMDMSPDRDHEHGLLI-AVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAHHACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGSITNGGADAGGGDGTGAIFSFFLEAGVEVDIPAEPSPQ----------------------IAPWRLGGLDGSAEHPHALNGHS-APANNS---SSSIQDGDAAHF----------AHMHILLVDDSIINLKMD-----------IKTVDIFDXXXXXXXXXXXXXXXXXXXX---------------LVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNLSGT-PRVVGLTADTGSEARAHCLRVGMSDVIYKPATAAAMLAFL-RHTPT 2649 A + K+ + +SH++RTP+ G++G+TS LL D HE + + S LLTLIN +LD ++E I E P L L A D A L + +P + A V+ + RL+Q+++NLL NA+KF V +S RR +E D ++ VS+RD G GIP RLF F+Q++ +S+ + G+GLGL +C MGG IW A G G+ F F AG EP P +A W + + AE P AL + AP + + ++D + F H+ ++L++D L +D ++ D++D L +D+ +N +V +L RL + A +G LE ++ ++ L++ D+QMP+M+G E T+RL PR++ LTA+ E R C GM D + KP AA++A L R TP+ Sbjct: 88 ADRAKSEFLANMSHEIRTPMNGVIGMTSLLL---DTDLSHEQRDFVETIRTSGESLLTLINEILDFSKIEAGQI-ELEHHPFDLVSCLESALDVVAVRA-----------------CHKGLDLVLDMAPDVPATVVGDATRLRQIVVNLLGNAVKFTEAGEVV-LSVRR------------------------------------------------------GSEDD----LLHVSVRDTGIGIPADRMDRLFQVFSQVD------ASTTRKYGGTGLGLAICRRLCEQMGGRIWVEIAV-------------------GIGSTFHFTFRAGSVPAPEVEPRPLFQQKRVLLVQPCASARRATAAVLAGWGVE-VTSVAEAPDALRQLAEAPPFDLLVVDAGLKDREPRSFLHAVRAHPNGTHLPVVLLNDVCRRLDVDERGRVHTVNKPVRRGDLYDALASAFGTGMAVSSRTTRPSTFDPLMGRRLPLRILLAEDNTVNQRVALRLLERLGYRADVAA-NGLEVLEAVRRV-------QYDLILMDMQMPEMNGLEATRRLRQEQAGRPGPRIIALTANALEEDRQRCFEAGMDDYLAKPIQVAALVAALERCTPS 592
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Match: A0A4Q1CA60_9BACT (Response regulator n=1 Tax=Oleiharenicola lentus TaxID=2508720 RepID=A0A4Q1CA60_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 3.240e-17 Identity = 168/652 (25.77%), Postives = 256/652 (39.26%), Query Frame = 1 Query: 844 NGALVVVQVEISP-IPEHLGRNHHITIARDVTAK-RREQEARASAEREALASQVKTATMQALSHDLRTPLQGIMGVTSTLL-MDMSPD-RDHEHGLLIAVMASSRLLLTLINNLLDVRRLETRSITSFEMAPVPLEQVLLDATDFCRPFAQMNXXXXXXXXXXXXXXXXXXXKLEIVPSPALSANVICNQLRLQQVIINLLSNAIKFNAH-HACVEISCRRMTRGAALAEAAAALXXXXXXXXXXXXXXXXXXAAYAEQPPSPGSERGDSSAQPSAAESDPAAPVVVVSIRDHGRGIPLHEGHRLFGQFAQLNNQSNLPSSSVGQPSGSGLGLNLCLSFVRHMGGHIWATNANAAPPDGS------------ITNGGADAGGGDGTGAIFSFFLEAG---VEVDIPAEP---SPQIAPWRLGGL-DGSAEHPHALNGHSAPANNSSSSIQDGDAAHFAHMHILL--------------------------VDDSIINLKMDIKTVDIFDXXXXXXXXXXXXXXXXXXXX--------------LVDDSIINLKVMRHMLLRLRVGSVTACMSGAAALEEAQKNALGPEERRFSLVITDIQMPDMDGYEFTKRLLALNL-SGTPRVVGLTADTGSEARAHCLRVGMSDVIYKP 2604 +G + V+VEI P + E +HI I D++A+ EQ+ R + E AS+ K+ + ++SH++RTP+ G++G+TS LL ++SP+ RD+ + SS LLT+I+++LD R+E+ + E P L Q + +A D A +L PA+ A ++ + RL+QV++NLL+N +KF + H VE+S AA EQ SD + I D G GI H LF F+Q++ +S+ + G+GLGL +C V MGG I T+ P GS IT+ T +FS G V D+ + W L + GSAE AL A ++I D D A +++ D + L +K I D L +D+ +N KV L RL + TA +G A+ + ERRF+LV+ D+QMP+MDG E T+ + A L P ++ LTA+ + R CL GM+D + KP Sbjct: 740 DGRRLHVRVEIQPALAEDGFVENHIAIVSDISARVETEQQLRRAKEDADAASRAKSDFLASMSHEIRTPMNGVIGMTSLLLETELSPEQRDYVS----TIRTSSDSLLTIISDILDFSRIESGRL-ELEQQPFELAQCIEEAVDIFAGAAA-----------------GKGIELAAYIDPAVPACILGDITRLRQVLVNLLNNGVKFTSRGHVTVEVS--------------------------------STPAAAGEQ-------------------SDQVR--IEFRITDTGIGIAPDRQHLLFRPFSQVD------ASTTRKYGGTGLGLAICRRLVELMGGEIGLTSN---PGQGSCFRFSIKSTAVAITD--------SHTPPLFSTLPNPGPVLVVDDLKVNRLMLDRALREWLLEPVVAGSAEEALAL----AEVRPIGAAIVDQDLGGSAGADLVIRLREIHPGLPVVLLAPPGSNLKRADGADPLLQRLAKPLKPYAIHDALRRVLAVPAARPDSRNPLASSPRLAEAVPLDILLAEDNPVNRKVALGYLERLGYKAATA-NNGREAVSAVK-------ERRFNLVLMDLQMPEMDGLEATRTIRAECLPDNQPVIIALTANAMTGDRERCLESGMNDYLTKP 1287 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349439 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13722 ID=mRNA_13722|Name=jgi.p|Trimin1|349439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3070bp|location=Sequence derived from alignment at Contig_43:91101..108599- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCAGATGACCTGCTGTGGATGGTCATGGTAACCGCCACGCATCACCTback to top protein sequence of jgi.p|Trimin1|349439 >Trimin1|349439|estExt_Genemark1.C_Ctg_430009 ID=Trimin1|349439|estExt_Genemark1.C_Ctg_430009|Name=jgi.p|Trimin1|349439|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=948bp MADDLLWMVMVTATHHLLVLQSDAAMRSVTTSKSDAAMRSVTTSKIPMLVback to top mRNA from alignment at Contig_43:91101..108599- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13722 ID=mRNA_13722|Name=jgi.p|Trimin1|349439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=17499bp|location=Sequence derived from alignment at Contig_43:91101..108599- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_43:91101..108599- >mRNA_13722 ID=mRNA_13722|Name=jgi.p|Trimin1|349439|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2844bp|location=Sequence derived from alignment at Contig_43:91101..108599- (Tribonema minus UTEX_B_3156 )back to top |