mRNA_13676 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171919
Unique NamemRNA_13676
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A836C935_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C935_9STRA)

HSP 1 Score: 895 bits (2314), Expect = 0.000e+0
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 1
Query:    1 MQKHLTGKSDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMGHDALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVLGFDKRQYQVGHWVSVPRMWAHVWCGPHRRFTCMYCTLTRWQPSVQPPLGCILL 1332
            MQKHLTGKSDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMGHDALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVLGFDKRQYQVGHWVSVPRMWAHVWCGPHRRFTCMYCTLTRWQPSVQPPLGCILL
Sbjct:    1 MQKHLTGKSDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMGHDALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVLGFDKRQYQVGHWVSVPRMWAHVWCGPHRRFTCMYCTLTRWQPSVQPPLGCILL 444          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A7S2L6I5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6I5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.930e-48
Identity = 112/398 (28.14%), Postives = 196/398 (49.25%), Query Frame = 1
Query:   28 DPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLP-VQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMGH---DALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDL---QSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVLGFDKRQYQV 1200
            D +  V A+ KL  ++ + +  ++ L +  +S   G + + ++      L  + +T  Q  AL+ F D  G G I I      ++  ++  +EG +     +A E   D VFPNWL++R DF+L+F+RF      D    Q   +        +R  ED+Q +A W+ ++  L  L  +R L+ +  +   +  PGH + AQG I DAFY++ +G V V +DG     L AG  FGE  L+++  R AT   SQ    + ++ ++  DYK ++ +    +    +D L   C    DW  +K+   S  +  ++   G+V++ + + +   Y + SG A  Q+ +  + +NRWP ++ +   +   ++ I + L+    GD FGED + GF  RQY V
Sbjct:   19 DNIGAVKALQKLDEYISRSKTSIILLFKRLDSSHDGALENEEIIRGFMKLTDISMTLGQAEALVEFIDFSGDGVIQIDELDKCLRDFRKAKREGGLQQVIDNATESRVDRVFPNWLVAREDFRLIFTRFAEDDDSDCNKEQLKVQRLFGVEQEKRSREDMQVLALWMQRNSVLPGLSYKRYLDLSKYINFLEAEPGHSLCAQGEIGDAFYILFAGEVQVLVDGQLAHTLVAGEGFGERSLETDEPRNATCICSQT---SRLLVVKAKDYKSMLKQHQTKKFNFAMDYLQHRCEVIRDWPYTKVYHLSGSLVRRQFESGEVLFRSGDESVALYFLISGEATAQKSIRRKATNRWPDRNSQYAVLEH-ERTIAIELKKFSDGDIFGEDLIFGFGNRQYCV 412          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A1R2B7T0_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B7T0_9CILI)

HSP 1 Score: 77.4 bits (189), Expect = 1.130e-11
Identity = 69/278 (24.82%), Postives = 126/278 (45.32%), Query Frame = 1
Query:  346 VFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGV-WVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWP-GQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVL 1173
            VFP WL+SR DFQ      L+    DL  AT    RK  ++R   +++ +  W  +    Q L  +   E    +R  +   G  +F Q    D  Y+V  G V+V  +G+ ++  +    T GE  L++N  R AT+ A       S++ ++  DY  I+ +         I+ L     F   +  SK+   ++ +   ++   +++Y  ++    FYI+  G+  +++ +  +L +R P G   E   +R  ++     LR+   GD FGE+ ++
Sbjct:   64 VFPQWLLSRQDFQ----DSLSVHSSDLNPAT--ICRKPHYQRDSLEVRALKAWTKECLFFQHLTERTANEVRKKLRTININKGDTIFKQNDPGDCLYLVAKGLVEVYKNGIEFIDIIGPKNTIGEGALENNCLRNATLIAKTP---VSLLVLKNDDYNDIVRRQKHKERFDMIEYLKSIPLFCTFYG-SKLERIAWNLFPMQYKKNQIIYSINDEPMNFYIIRQGSIKMEKTVSLKLKSRMPCGYKSEKFFIR--ERTYLKVLRECFNGDFFGEEEIV 329          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A3F2RZ95_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZ95_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.610e-9
Identity = 67/266 (25.19%), Postives = 107/266 (40.23%), Query Frame = 1
Query:  322 ALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGLDSN----AARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLS 1056
            A EL K T     L+ + D     SR   A G  +Q   + S R       K    R   D+  ++ +L      ++L      E   VV       G  VF +G + D FY++ SGSVDV I             + NL  G+ FGE+ L       +A + T   SQ   +         DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ + +V  L+
Sbjct:  269 AAELVKITRNDYNLMLKNDQLEFLSRMQIANGIGMQRPVQRSQREYIKVLSKKKHTRTKPDIDMLSEYLQTLKFFRSLPKSFVRELCVVVDFLTLPSGACVFREGEVGDQFYIIFSGSVDVNISSNDFRGNVQQTKLVNLTEGSHFGELALMKGRGVRSATVVTREESQLLVICE------KDYNSTLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKLSTGSVLYRQGDRASHVYFVVRGELVVTKGIVDHLT 528          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: H3H816_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H816_PHYRM)

HSP 1 Score: 70.1 bits (170), Expect = 3.750e-9
Identity = 61/252 (24.21%), Postives = 106/252 (42.06%), Query Frame = 1
Query:  364 ISRADFQLVF--------SRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            I+R D+ L+         SR   A G  +Q   + + R       K    R   D+  ++ +L      ++L      E  +VV  +    G  VF +G I D FY++ SGSVDV I+            + NL  G+ FGE+ L      R AT+   +   +  +      DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ +++
Sbjct:  372 ITRNDYNLMLKNDQLEFLSRMQIANGIGVQRPVQRTQREYIKVLTKKKHARSKADIDMLSEYLQTLKFFRSLPKAFVRELCTVVDFQTLLAGACVFREGEIGDLFYIIFSGSVDVNINSKDFKGNMQMTKLVNLTEGSHFGELALMKGRGVRSATVVTREECQLLVICE---KDYNATLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKVSTGSVLYRQGDRATHVYFVVRGEVVVTKEI 620          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A0W8BVN2_PHYNI (cAMP-dependent protein kinase type I-alpha regulatory subunit n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BVN2_PHYNI)

HSP 1 Score: 70.5 bits (171), Expect = 3.770e-9
Identity = 64/258 (24.81%), Postives = 107/258 (41.47%), Query Frame = 1
Query:  322 ALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            A EL K T     L+ + D     SR   A G  +Q   + + R       K    R   D+  ++ +L      ++L      E   VV       G  VF +G + D FY++ SGSVDV I+            + NLA G+ FGE+ L      R AT+   +   +  +      DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ +++
Sbjct:  373 ATELVKITRNDYNLMLKNDQLEFLSRMQIANGIGMQRPAQRTQREYIKVLTKKKHARTKADIDMLSEYLQMLKFFRSLPKSFVRELCVVVDFLTLPAGACVFREGEVGDLFYIIFSGSVDVNINSKDFKGNMQMTKLINLAEGSHFGELALMKGRGVRSATVITREECQLLVICE---KDYNSTLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKLSTGSVLYKQGDRATHVYFVVRGELVVTKEI 627          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: A0A662XGM3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGM3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.820e-9
Identity = 62/253 (24.51%), Postives = 107/253 (42.29%), Query Frame = 1
Query:  364 ISRADFQLVF--------SRFLTAGGRDLQSATENS--------LRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            I+RAD+ L+         SR   A G     + + +        L K    R   D+  ++ +L      ++L      E   VV +     G  VF +G + D FY++ SGSVD+ I             + NL  GA FGE+ L      R AT+   +      ++ I  +DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y+  E A   Y V  G  V+ +++
Sbjct:  406 ITRADYNLMLKNDQLEFLSRMQLANGLGAAHSRQQTSQREYVKVLAKKKNTRTKADIDMLSEYLQTLKFFRSLPKSFVRELCLVVDVLALPAGSCVFREGEVGDQFYIIFSGSVDINISSKDFRGNAQQTKLINLTEGAHFGELALMKGRGVRSATVVTREE---CQLLVIGESDYNSTLRRMQKKDMAKRVAVLDQIPMFQTPEWTGELLKELSYVLLEQKLATGSVLYNQGERASHVYFVVRGELVVTKEI 655          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: H3HCB7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCB7_PHYRM)

HSP 1 Score: 70.1 bits (170), Expect = 4.650e-9
Identity = 61/252 (24.21%), Postives = 106/252 (42.06%), Query Frame = 1
Query:  364 ISRADFQLVF--------SRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            I+R D+ L+         SR   A G  +Q   + + R       K    R   D+  ++ +L      ++L      E  +VV  +    G  VF +G I D FY++ SGSVDV I+            + NL  G+ FGE+ L      R AT+   +   +  +      DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ +++
Sbjct:  361 ITRNDYNLMLKNDQLEFLSRMQIANGIGVQRPVQRTQREYIKVLTKKKHARSKADIDMLSEYLQTLKFFRSLPKAFVRELCTVVDFQTLLAGACVFREGEIGDLFYIIFSGSVDVNINSKDFKGNMQMTKLVNLTEGSHFGELALMKGRGVRSATVVTREECQLLVICE---KDYNATLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKVSTGSVLYRQGDRATHVYFVVRGEVVVTKEI 609          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: G4ZNS7_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZNS7_PHYSP)

HSP 1 Score: 69.3 bits (168), Expect = 9.000e-9
Identity = 64/262 (24.43%), Postives = 107/262 (40.84%), Query Frame = 1
Query:  310 MGHDALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            +   A EL K T     L+ + D     SR   A G  +Q   + + R       K    R   D+  ++ +L      ++L      E   VV       G  VF +G + D FY++ SGSVDV I+            + NL  GA FGE+ L      R AT+   +   +  +      DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ +++
Sbjct:  385 LSKSATELVKITRNDYNLMLKNDQLEFLSRMQIANGIGVQRPVQRTQREYVKVLTKKKHARTKADIDMLSEYLQTLKFFRSLPKTFVRELCLVVDFLTLPAGACVFREGEVGDLFYIIFSGSVDVNINSKDFKGNVQMTKLVNLTEGAHFGELALMKGRGVRSATVITREECQLLVICE---KDYNSTLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKLSTGSVLYRQGDRATHVYFVVRGELVVTKEI 643          
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Match: D0NRR6_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NRR6_PHYIT)

HSP 1 Score: 67.8 bits (164), Expect = 2.480e-8
Identity = 64/258 (24.81%), Postives = 106/258 (41.09%), Query Frame = 1
Query:  322 ALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSLR-------KNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDG---------VWVANLAAGATFGEMGL-DSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGA-DWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKL 1041
            A EL K T     L+ + D     SR   A G  +Q   + S R       K    R   D+  ++ +L      ++L      E   VV       G  VF +G + D FY++ SGSVDV I+            + NL  G+ FGE+ L      R AT+   +   +  +      DY   + ++    MA+++ +L +   F   +W+   ++  SY +  Q+   G V+Y   + A   Y V  G  V+ +++
Sbjct:  228 ATELVKITRNDYNLMLKNDQLEFLSRMQIANGIGVQRTAQKSQREYVKVLTKKKHARSKADIDMLSEYLQTLKFFRSLPKSFVRELCVVVDFLTLPAGACVFREGEVGDLFYIIFSGSVDVNINSKDFKGNTQMTKLINLTEGSHFGELALMKGRGVRSATVITREECQLLVICE---KDYNMTLRRMQKKDMAKRVGVLDQIPMFQTPEWTGELLKELSYVLLEQKLSTGSVLYRQGDRALHVYFVVRGELVVTKQI 482          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171919 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A836C935_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2L6I5_9STRA1.930e-4828.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1R2B7T0_9CILI1.130e-1124.82Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A3F2RZ95_9STRA1.610e-925.19Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
H3H816_PHYRM3.750e-924.21Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8BVN2_PHYNI3.770e-924.81cAMP-dependent protein kinase type I-alpha regulat... [more]
A0A662XGM3_9STRA3.820e-924.51Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3HCB7_PHYRM4.650e-924.21Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4ZNS7_PHYSP9.000e-924.43Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
D0NRR6_PHYIT2.480e-824.81Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_86contigContig_86:188859..191589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171919|e_gw1.86.90.1
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04121
KEGG ModuleM00695
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG koko:K04345,ko:K10273
EC2.7.11.11
DescriptioncAMP-dependent protein kinase regulator activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0664@1|root,KOG1113@2759|Eukaryota
Evalue2.14e-71
Seed ortholog2880.D8LRU9
Hectar predicted targeting categoryother localisation
TranscriptId172241
TrackFilteredModels1
ProteinId171919
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171919gene_13676Tribonema minus UTEX_B_3156 geneContig_86 188859..191589 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171919Trimin1|171919|e_gw1.86.90.1Tribonema minus UTEX_B_3156 polypeptideContig_86 188859..191589 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13676_4exon_13676_4Tribonema minus UTEX_B_3156 exonContig_86 188859..189626 -
exon_13676_3exon_13676_3Tribonema minus UTEX_B_3156 exonContig_86 190395..190706 -
exon_13676_2exon_13676_2Tribonema minus UTEX_B_3156 exonContig_86 191004..191108 -
exon_13676_1exon_13676_1Tribonema minus UTEX_B_3156 exonContig_86 191440..191589 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13676CDS_13676Tribonema minus UTEX_B_3156 CDSContig_86 191440..191589 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13676 ID=mRNA_13676|Name=jgi.p|Trimin1|171919|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1335bp|location=Sequence derived from alignment at Contig_86:188859..191589- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGAAACATTTGACAGGCAAAAGCGACCCTGTGGACACAGTTATCGC
CATCAACAAGCTGACCAGCTTTATGGAGCAGCGGCGAAAGCGGCTGGTGC
AACTGCTCCGAGGCTTCGAGTCTGGTGGCAGAGGTAAGGTATTGCATCGT
GACCTTTACTTGGCCATCAGCAACCTCCCAGTACAACTGACGAGTCAGCA
GTTCTTGGCACTGCTGAACTTTGCGGACAGTGAGGGGACAGGCCGCATAA
GCATCAAGAACTTCTGCTCCATGGTTCAGGTGCTGCAGCAGCGCTTGAAG
GAGGGATTTATGGGCCACGACGCACTGGAGCTGCCCAAAGACACGGTCTT
CCCAAACTGGCTCATCTCAAGGGCAGATTTTCAGCTGGTGTTCTCGCGCT
TCCTGACGGCGGGGGGGAGGGATCTGCAGAGCGCAACGGAGAACTCGCTG
CGGAAGAATCCTTTTGAGCGCGTGCACGAGGACCTGCAGTACATTGCCAA
CTGGCTCAGCCAGAGCCCCGCGCTGCAGGCGCTTGGCGCGCAGCGGTGCC
TGGAGTTTGCCAGCGTGGTCCGCATGGAAGACCACGCGCCCGGCCACGTC
GTCTTTGCGCAGGGCAGCATCTCCGACGCCTTCTACGTCGTGCACAGCGG
CTCTGTGGACGTTGAGATCGACGGCGTCTGGGTGGCCAACCTCGCGGCGG
GGGCGACGTTCGGCGAGATGGGCCTCGACAGCAACGCCGCGCGCATCGCG
ACCATCCGCGCGTCGCAGGCGTTCGCCGTTACGAGCGTCGTCAACATACG
GCTCACGGACTACAAGCACATCATGTCCAAGGTCAACGCGGCGCGCATGG
CGCGCAAGATCGACCTCCTCTCGCGCCACTGCCGCTTCGGCGCGGACTGG
TCATGTAGCAAGATCCGCGCCTTCTCGTACTGCATGGCGTACCAGCGCCA
CCCCCTGGGCAAGGTGGTGTACGACACGAGCGAGGTGGCGCACACGTTCT
ACATCGTGGCGAGCGGCACCGCGGTGCTGCAGCGCAAGCTCGTCTACAGG
CTGTCGAATCGGTGGCCGGGGCAGTCGCGGGAGGGCGGCGAGATGCGCGC
CGTGCAGCAGGTCATCACGGTCAACCTGCGGGACGTGAAGCAGGGCGACA
CGTTCGGTGAAGACGCTGTGCTGGGGTTTGACAAGCGACAGTATCAGGTA
GGCCACTGGGTGTCTGTGCCCAGGATGTGGGCACATGTGTGGTGCGGGCC
GCACCGTAGATTCACATGTATGTATTGCACGCTCACAAGATGGCAACCAT
CAGTTCAGCCGCCCCTTGGTTGCATACTTCTATAA
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protein sequence of jgi.p|Trimin1|171919

>Trimin1|171919|e_gw1.86.90.1 ID=Trimin1|171919|e_gw1.86.90.1|Name=jgi.p|Trimin1|171919|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=445bp
MQKHLTGKSDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHR
DLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLK
EGFMGHDALELPKDTVFPNWLISRADFQLVFSRFLTAGGRDLQSATENSL
RKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHV
VFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIA
TIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADW
SCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYR
LSNRWPGQSREGGEMRAVQQVITVNLRDVKQGDTFGEDAVLGFDKRQYQV
GHWVSVPRMWAHVWCGPHRRFTCMYCTLTRWQPSVQPPLGCILL*
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mRNA from alignment at Contig_86:188859..191589-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13676 ID=mRNA_13676|Name=jgi.p|Trimin1|171919|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2731bp|location=Sequence derived from alignment at Contig_86:188859..191589- (Tribonema minus UTEX_B_3156 )
ATGCAGAAACATTTGACAGGCAAAAGCGACCCTGTGGACACAGTTATCGC CATCAACAAGCTGACCAGCTTTATGGAGCAGCGGCGAAAGCGGCTGGTGC AACTGCTCCGAGGCTTCGAGTCTGGTGGCAGAGGTAAGGTATTGCATCGT GTGTCGCATAGCGTTCTCGAGGCCACCACGCAATAAACAGGCCTCTGACG GCAAGCATGATGTAATTCGGCGAGTTGCTGCTGCTAGCAAGCGTGTGGTT TGCTGACATGCTGTAAGCGCTATCGCAATCTCGCGACCTGGTTGCAGTTG GTGTACTTGATGAAGTGGAGAGAAACTTCTGTGCCCCTGGGTCATGCTTG GGGCGTCCACTACTGTTCCATGGCCGCAAGTCAGGTGCACTCTTGTGCGT GCTAGCCCATCAACCGTCAGGTTGTGAAACCCTCTGACTTCATTTCGTGC AATGGTCACTGCAGGTCAAATGACGCGGGAGGACCTTTACTTGGCCATCA GCAACCTCCCAGTACAACTGACGAGTCAGCAGTTCTTGGCACTGCTGAAC TTTGCGGACAGTGAGGGGACAGGCCGCATAAGCATCGTAAGTCACTGCTC TCATGACTTTTTTTACGTTACTTGTAGCATACGTGCTCTGCTCTACACAG CAGCAGCAGGTGCTCATGTGATATACGTGTGCGTTGTTGCAGTCTAGAGA GAGTGTGCATGTTTGTCACTTGCCAGGGCTTGTGTGTCGAGCTTTCATCA ACAATTGTACTTGCGGCACCAGCTGCAATAAAACAACAATGCAACGGTGT TGGTGCTTGTCACACAGTTGCTGCGCTGAAAGGGCTTGTTGGTGTCTTGT GCGTGCTGCTCCACCCTCTCGCACTGCCCGCAGAAGAACTTCTGCTCCAT GGTTCAGGTGCTGCAGCAGCGCTTGAAGGAGGGATTTATGGGCCACGACG CACTGGAGCTGCCCAAAGACACGGTCTTCCCAAACTGGCTCATCTCAAGG GCAGATTTTCAGCTGGTGTTCTCGCGCTTCCTGACGGCGGGGGGGAGGGA TCTGCAGAGCGCAACGGAGAACTCGCTGCGGAAGAATCCTTTTGAGCGCG TGCACGAGGACCTGCAGTACATTGCCAACTGGCTCAGCCAGAGCCCCGCG CTGCAGGCGCTTGGCGCGCAGCGGTGCCTGGAGTTTGCCAGCGTGGTGAG TTCACACATGTACCTAAGTAATGCAAGGGACATAGCTTGATCCGTGAAGC CGTACTCCAACTTTGCGCGGGCGGAAAGCGAGCAGAGGTGCAGCTTGCAT ACACGCACTGCAACAGAGTACATCTTGAACTTGTTGGAGAGGTGTAAATG ACACATGAATTGAGCCCTATATTGTCCTGTCCTGTAGGATATGCCTGCAG CAATTGATGTAGTATGGGCAACAAGCTTCAAGGGCCGCTGCTACAGCTGT CACTGCCAGGAAGCAATCAGGCTTTTCTAGGCACCAAAGCTGAGTAACAG GCATCAGTAATCCAGTTCATTGCAGAAGAGTGCAGATTGCACTTCAGCAG TGTAGCATGGGTGTCTGAGTTTTCCATTTTGTCACTTTGTGCATGGCGGT AATCGCTGGTATGCCAGTTGCATACTTGGCTGTGAGCGTTGATGCATCCG CGGCCTTCCAGTATTCAGCGAATCGATCGAAAGTCTTGGCAACACACATG ATTGTTTGAAAGACTGGCTGACATGTGGAAGGCACGATGTACACCATTGT GAACTGGTGATGTACTGCGTTGAATCCTGAAGTGGCGTGCGAGTTGCAGT TGTGCAAACGCACCCTCTCACCCGCGCGTCTCTGCCCTGTCTTGCAGGGC TGCTCCCCGTGTGTCACCACTGACCGCTTCTTGCATGACGCAATGTGCCA AGGCTGCGCTGTGTAGACTCATGTATTGGGAGCCTCCCTGTCTGCGCGTG TCGCATGCGGCAGGTCCGCATGGAAGACCACGCGCCCGGCCACGTCGTCT TTGCGCAGGGCAGCATCTCCGACGCCTTCTACGTCGTGCACAGCGGCTCT GTGGACGTTGAGATCGACGGCGTCTGGGTGGCCAACCTCGCGGCGGGGGC GACGTTCGGCGAGATGGGCCTCGACAGCAACGCCGCGCGCATCGCGACCA TCCGCGCGTCGCAGGCGTTCGCCGTTACGAGCGTCGTCAACATACGGCTC ACGGACTACAAGCACATCATGTCCAAGGTCAACGCGGCGCGCATGGCGCG CAAGATCGACCTCCTCTCGCGCCACTGCCGCTTCGGCGCGGACTGGTCAT GTAGCAAGATCCGCGCCTTCTCGTACTGCATGGCGTACCAGCGCCACCCC CTGGGCAAGGTGGTGTACGACACGAGCGAGGTGGCGCACACGTTCTACAT CGTGGCGAGCGGCACCGCGGTGCTGCAGCGCAAGCTCGTCTACAGGCTGT CGAATCGGTGGCCGGGGCAGTCGCGGGAGGGCGGCGAGATGCGCGCCGTG CAGCAGGTCATCACGGTCAACCTGCGGGACGTGAAGCAGGGCGACACGTT CGGTGAAGACGCTGTGCTGGGGTTTGACAAGCGACAGTATCAGGTAGGCC ACTGGGTGTCTGTGCCCAGGATGTGGGCACATGTGTGGTGCGGGCCGCAC CGTAGATTCACATGTATGTATTGCACGCTCACAAGATGGCAACCATCAGT TCAGCCGCCCCTTGGTTGCATACTTCTATAA
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Coding sequence (CDS) from alignment at Contig_86:188859..191589-

>mRNA_13676 ID=mRNA_13676|Name=jgi.p|Trimin1|171919|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1335bp|location=Sequence derived from alignment at Contig_86:188859..191589- (Tribonema minus UTEX_B_3156 )
ATGCAGAAACATTTGACAGGCAAAAGCGACCCTGTGGACACAGTTATCGC
CATCAACAAGCTGACCAGCTTTATGGAGCAGCGGCGAAAGCGGCTGGTGC
AACTGCTCCGAGGCTTCGAGTCTGGTGGCAGAGGTAAGGTATTGCATCGT
GACCTTTACTTGGCCATCAGCAACCTCCCAGTACAACTGACGAGTCAGCA
GTTCTTGGCACTGCTGAACTTTGCGGACAGTGAGGGGACAGGCCGCATAA
GCATCAAGAACTTCTGCTCCATGGTTCAGGTGCTGCAGCAGCGCTTGAAG
GAGGGATTTATGGGCCACGACGCACTGGAGCTGCCCAAAGACACGGTCTT
CCCAAACTGGCTCATCTCAAGGGCAGATTTTCAGCTGGTGTTCTCGCGCT
TCCTGACGGCGGGGGGGAGGGATCTGCAGAGCGCAACGGAGAACTCGCTG
CGGAAGAATCCTTTTGAGCGCGTGCACGAGGACCTGCAGTACATTGCCAA
CTGGCTCAGCCAGAGCCCCGCGCTGCAGGCGCTTGGCGCGCAGCGGTGCC
TGGAGTTTGCCAGCGTGGTCCGCATGGAAGACCACGCGCCCGGCCACGTC
GTCTTTGCGCAGGGCAGCATCTCCGACGCCTTCTACGTCGTGCACAGCGG
CTCTGTGGACGTTGAGATCGACGGCGTCTGGGTGGCCAACCTCGCGGCGG
GGGCGACGTTCGGCGAGATGGGCCTCGACAGCAACGCCGCGCGCATCGCG
ACCATCCGCGCGTCGCAGGCGTTCGCCGTTACGAGCGTCGTCAACATACG
GCTCACGGACTACAAGCACATCATGTCCAAGGTCAACGCGGCGCGCATGG
CGCGCAAGATCGACCTCCTCTCGCGCCACTGCCGCTTCGGCGCGGACTGG
TCATGTAGCAAGATCCGCGCCTTCTCGTACTGCATGGCGTACCAGCGCCA
CCCCCTGGGCAAGGTGGTGTACGACACGAGCGAGGTGGCGCACACGTTCT
ACATCGTGGCGAGCGGCACCGCGGTGCTGCAGCGCAAGCTCGTCTACAGG
CTGTCGAATCGGTGGCCGGGGCAGTCGCGGGAGGGCGGCGAGATGCGCGC
CGTGCAGCAGGTCATCACGGTCAACCTGCGGGACGTGAAGCAGGGCGACA
CGTTCGGTGAAGACGCTGTGCTGGGGTTTGACAAGCGACAGTATCAGGTA
GGCCACTGGGTGTCTGTGCCCAGGATGTGGGCACATGTGTGGTGCGGGCC
GCACCGTAGATTCACATGTATGTATTGCACGCTCACAAGATGGCAACCAT
CAGTTCAGCCGCCCCTTGGTTGCATACTTCTATAA
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