mRNA_13618 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|175910
Unique NamemRNA_13618
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835ZBV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV8_9STRA)

HSP 1 Score: 587 bits (1513), Expect = 2.050e-212
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1 
Query:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 834
            MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL
Sbjct:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 278
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835Z319_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z319_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 8.070e-156
Identity = 224/283 (79.15%), Postives = 237/283 (83.75%), Query Frame = 1 
Query:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAP-AGGSGAQVDDCAVCLEPLHSRIW----EPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 834
            M QDA+ IP DQQRL W G  LE  RTVSDY MKFCP+L EPTLQL L LRGGGCVTGGRFADVAD ++IS MAF  +AP WRVACPGLN EGVC TT CRARG+MVI  VGMGAFTLGDACACPLCRRPF PVTCAFH C WMFEGVKAGGGAALG VWREAGDAYERFNTGA+GESGGSMVEWERLVLVAKYRG  R+P A  AAA  VAGEPAA  A GSGAQVDDCAVCLEPLHS  W    + A TPCGHVYHEACLKAWRRSSSA++ TCP+CRA+L
Sbjct:  192 MFQDAQSIPPDQQRLRWRGKMLEDSRTVSDYGMKFCPQLREPTLQLELRLRGGGCVTGGRFADVADLNAISHMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGKMVIRGVGMGAFTLGDACACPLCRRPFAPVTCAFHACAWMFEGVKAGGGAALGGVWREAGDAYERFNTGADGESGGSMVEWERLVLVAKYRGRKRIPAADAAAAGGVAGEPAAALASGSGAQVDDCAVCLEPLHS--WHVSLQAAVTPCGHVYHEACLKAWRRSSSASNGTCPSCRANL 472
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835YTW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW7_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 1.700e-140
Identity = 209/282 (74.11%), Postives = 220/282 (78.01%), Query Frame = 1 
Query:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIW----EPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 834
            MI D EGIP DQQRL W G ALE  RTVSDY MKFCPEL EP++Q++L LRGGG VT GRFADVADA++ISRMAF  +AP WRVACPGLN EGVC TT CRARGEMVIH VGMGAFTLGDACACPLCRRPF PVTCAF  C WMFEGVKAGGG ALG VWR AGDAYERFNTGA+GESGGSMVEWERLVLVAK RG VR                AA A GS AQVDDCAVCLEPL S  W    + A TPCGHVYHEACLKAWRRSSS +  TC +C ADL
Sbjct:  167 MIHDTEGIPPDQQRLIWRGKALEDSRTVSDYGMKFCPELREPSVQILLRLRGGGSVTSGRFADVADANAISRMAFSHNAPAWRVACPGLNVEGVCGTTGCRARGEMVIHGVGMGAFTLGDACACPLCRRPFAPVTCAFLACAWMFEGVKAGGGVALGGVWRAAGDAYERFNTGADGESGGSMVEWERLVLVAKCRGRVRPA--------------AALASGSSAQVDDCAVCLEPLCS--WNVSLQAAVTPCGHVYHEACLKAWRRSSSTSRGTCASCCADL 432
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835YSA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA3_9STRA)

HSP 1 Score: 328 bits (840), Expect = 8.770e-110
Identity = 162/278 (58.27%), Postives = 195/278 (70.14%), Query Frame = 1 
Query:    4 IQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPE-LCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 834
            IQ  EG P +QQRL W G  L+  R++  + M   P+ +  PTLQL+  LRGGG ++GG FADVADA+ ISR+AF + AP+WR+AC GLN EG+CS   C A G+MVIH++GMGAF LG ACACPLC  P  P+TCAFH CVWMFEGVKA GGA+L + WREAGD+YERFNTG EG S G+MVEWER +L+AK R       A T  A S           +G Q+DDCAVCLEPL +R     +TPCGH+YH+ACL AW+R SSA S  CP CRADL
Sbjct:   13 IQRTEGFPPEQQRLIWSGKELKDSRSLRQHFMFPGPDNIHPPTLQLIPRLRGGGSLSGGMFADVADANGISRIAFSETAPEWRIACEGLNIEGLCSNAECAAHGQMVIHKIGMGAFALGGACACPLCVAPIVPLTCAFHRCVWMFEGVKADGGASLSTAWREAGDSYERFNTGTEGTSSGAMVEWERFMLIAKGRKFTCARAADTEDASS-----------NGTQLDDCAVCLEPLRTRRAPFVKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 279
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A836CBY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBY2_9STRA)

HSP 1 Score: 327 bits (838), Expect = 2.400e-109
Identity = 165/279 (59.14%), Postives = 197/279 (70.61%), Query Frame = 1 
Query:    1 MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCE-PTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGHVYHEACLKAWRRSSSAASATCPTCRADL 834
            +I D EGIP +QQRL W G  LE  R++S+Y++   P++ + P L LVL +RGGG      FADVADA+ ISR+AF D  PKWR+AC GLN EG+C+   C A G+MVIH++GMGAFTLG ACACPLC  P  P+TCAFH CVWMFEGVKA   AAL + WREAGD YERFNTG EG   G+MVEWERLVL+AK R  +    A TA   S +GE  +    SG Q+DDCAVCLEPL +      +TPCGH+YH+ACL AW+R SSA S  CP CRADL
Sbjct:   19 IITDLEGIPPEQQRLIWCGKQLEDRRSLSEYHID--PDINDLPALHLVLRMRGGGPT----FADVADANGISRIAFSDTGPKWRIACEGLNIEGLCTNAECAAHGKMVIHKIGMGAFTLGGACACPLCDAPIVPLTCAFHRCVWMFEGVKADSCAALSTAWREAGDTYERFNTGTEGSGSGAMVEWERLVLIAKGRDSIHAAAAYTAVVCSKSGELTS---SSGTQLDDCAVCLEPLRTLFASFVKTPCGHLYHKACLTAWQRCSSAGSGRCPMCRADL 288
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835YV99_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV99_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.260e-49
Identity = 78/115 (67.83%), Postives = 84/115 (73.04%), Query Frame = 1 
Query:  229 DDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREAGDAYERFNTGAEGESGGS-MVEWERLVL 570
            D AP WR    G+N E +C    C A GE+VIH VGMGAF LGDACACPLC  P  PV CA ++CVWMFEGVKAGGGA L   WRE GDAYERFNT AEGESGG  M +WERLVL
Sbjct:    2 DTAPAWRGVARGINVECLCGNAQCAAYGEVVIHSVGMGAFALGDACACPLCHVPSAPVACAVYNCVWMFEGVKAGGGAVLSGAWRETGDAYERFNTRAEGESGGGGMADWERLVL 116
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A833WHP8_PHYIN (Ring finger domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHP8_PHYIN)

HSP 1 Score: 157 bits (396), Expect = 9.150e-42
Identity = 98/281 (34.88%), Postives = 140/281 (49.82%), Query Frame = 1 
Query:    4 IQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDAC--ACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREA-GDAYERFNTGAEGESGGSMVEWERLVLVAKY-RGHVRVPDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAET-PCGHVYHEACLKAWRR--SSSAASATCPTCR 825
            I D EGIP DQQRL   G ALE   T+  Y++K      E TL L L +RGGG        D  D   +  +  D  AP WR    G+N EG C    C+A GEMVIH+ G  AF L       CP+C++PF P+TC F++C W F+G ++    ++ S WR A G+ Y RF+T    +   + V+W+ L++VAK  R  + V   G + +  V             + + C++C  P   R  +   T  CGH +H  C++ W      +   +TCP C+
Sbjct:  129 IYDREGIPPDQQRLVLDGRALEKRNTLEHYDVK-----AECTLHLTLRMRGGGGPIDFADLDYEDTWLVE-LQLDAKAPGWRTCTEGINIEGECKNRRCKAFGEMVIHQNGYEAFNLSTDTDVKCPICKKPFPPITCGFYNCAWKFDGKRSRDDFSISSTWRNARGEKYYRFDT----DQAEATVKWDSLLIVAKSKRDAIAVQMPGFSRSAVVR------------KSNVCSICWAPFGLRRDQCLRTGDCGHTFHRGCIRVWSEYCKGNDTLSTCPLCQ 387
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: D0NAQ3_PHYIT (Ubiquitin, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NAQ3_PHYIT)

HSP 1 Score: 145 bits (366), Expect = 6.290e-36
Identity = 80/197 (40.61%), Postives = 109/197 (55.33%), Query Frame = 1 
Query:    4 IQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDAC--ACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREA-GDAYERFNTGAEGESGGSMVEWERLVLVAKYR 585
            I D EGIP DQQRL   G ALE   T+  Y++K      E TL L L +RGGG        D  D   +  +  D  AP WR    G+N EG C    C+A GEMVIH+ G  AF L       CP+C++PF P+TC F++C W F+G ++    ++ S WR A G+ Y RF+T    +  G+ V+W+ L++VAK +
Sbjct:  129 IYDREGIPPDQQRLVLDGRALEKRNTLEHYDVK-----AECTLHLTLRMRGGGGPIDFADLDYEDTWLVE-LQLDAKAPGWRTCTEGINIEGECKNRRCKAFGEMVIHQNGYEAFNLSTDTDVKCPICKKPFPPITCGFYNCAWKFDGKRSRDDFSISSTWRNARGEKYYRFDT----DQAGATVKWDSLLIVAKSK 315
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A835YKP3_9STRA (Ubiquitin-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKP3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 5.240e-30
Identity = 65/151 (43.05%), Postives = 80/151 (52.98%), Query Frame = 1 
Query:    4 IQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTLGDACACPLCR---RPFTPVTCAFHDCVWMFEGVK 447
            ++D  G P D QRL + G  L    T++D+ ++        TL L     GG       FADV+ + +I  +    DAP WRVAC GLN EG C    C AR  MVIH+VGM AFTLG  C CPLC      F P TC    C+WM+EG K
Sbjct:    5 VEDQYGTPRDLQRLLYDGNRLHRDCTLTDFGIEN-----GSTLDLFPASDGGCGRMALPFADVSRSRAIKHIQLTADAPDWRVACEGLNMEGYCRKAGCPARNSMVIHQVGMAAFTLGSRCECPLCSLCGSAFQPRTCGLMACLWMYEGAK 150
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BLAST of jgi.p|Trimin1|175910 vs. uniprot
Match: A0A6G0XN20_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN20_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.660e-28
Identity = 71/192 (36.98%), Postives = 99/192 (51.56%), Query Frame = 1 
Query:    4 IQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLMLRGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWCRARGEMVIHEVGMGAFTL-GDACACPLCRRPFTPVTCAFHDCVWMFEGVKAGGGAALGSVWREA-GDAYERFNTGAEGESGGSMVEWERLVLV 573
            I+DA GIP DQQRL +    LE  R + +YN++      + TL L           G  FADV +   + +     + P WR  C GLN EG C    C+A G++VI  + M  F L   +  CP+CR   TP+TC F+ C W FEGVKA     + S W  A GD Y RF++        ++VEW+ L+++
Sbjct:  126 IEDATGIPPDQQRLIFESKQLEDERRLGNYNIQ-----TKSTLHL-----------GVLFADVENCQHLQQRRVSYEGPTWRTICHGLNIEGNCLNRQCQAFGKLVIAPILMNPFNLLSHSMKCPICRAHVTPITCGFYKCRWRFEGVKAPSMMQMCSAWSVADGDKYHRFSSDEC-----NLVEWDSLLII 296
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175910 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBV8_9STRA2.050e-212100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z319_9STRA8.070e-15679.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTW7_9STRA1.700e-14074.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSA3_9STRA8.770e-11058.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBY2_9STRA2.400e-10959.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YV99_9STRA2.260e-4967.83Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A833WHP8_PHYIN9.150e-4234.88Ring finger domain n=1 Tax=Phytophthora infestans ... [more]
D0NAQ3_PHYIT6.290e-3640.61Ubiquitin, putative n=2 Tax=Phytophthora infestans... [more]
A0A835YKP3_9STRA5.240e-3043.05Ubiquitin-like domain-containing protein (Fragment... [more]
A0A6G0XN20_9STRA1.660e-2836.98Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:170108..170944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|175910|e_gw1.131.14.1
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121
KEGG ModuleM00177,M00179
KEGG Pathwayko03010,map03010
KEGG koko:K02983
Descriptionstructural constituent of ribosome
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1552@1|root,KOG0003@2759|Eukaryota
Evalue1.92e-39
Seed ortholog2880.D7FKZ7
Hectar predicted targeting categoryother localisation
TranscriptId176232
TrackFilteredModels1
ProteinId175910
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175910gene_13618Tribonema minus UTEX_B_3156 geneContig_131 170108..170944 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13618_1exon_13618_1Tribonema minus UTEX_B_3156 exonContig_131 170108..170944 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13618CDS_13618Tribonema minus UTEX_B_3156 CDSContig_131 170108..170944 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175910Trimin1|175910|e_gw1.131.14.1Tribonema minus UTEX_B_3156 polypeptideContig_131 170108..170944 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13618 ID=mRNA_13618|Name=jgi.p|Trimin1|175910|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=837bp|location=Sequence derived from alignment at Contig_131:170108..170944+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATTCAGGACGCGGAGGGCATCCCTCTCGACCAGCAGCGCCTATGCTG
GCACGGCACGGCGCTCGAGGGCTGCCGCACCGTCAGTGACTACAACATGA
AATTTTGCCCCGAGCTGTGTGAGCCCACGCTCCAGCTCGTACTGATGCTG
CGCGGCGGCGGCTGCGTCACTGGTGGCCGCTTTGCCGATGTGGCCGACGC
GAGCAGCATCTCGCGCATGGCGTTCGACGACGACGCCCCCAAGTGGCGTG
TGGCGTGCCCGGGGCTCAACGCCGAGGGCGTGTGCAGCACCACTTGGTGC
AGGGCGCGCGGCGAGATGGTCATCCACGAGGTCGGCATGGGCGCATTCAC
GCTCGGCGACGCGTGCGCGTGCCCGCTGTGCCGCAGGCCGTTCACGCCCG
TCACGTGCGCCTTCCACGACTGCGTGTGGATGTTCGAGGGCGTCAAGGCG
GGCGGCGGGGCAGCGCTCGGCAGCGTGTGGCGCGAGGCGGGCGACGCCTA
CGAGCGCTTCAACACGGGCGCGGAGGGCGAAAGCGGCGGCAGCATGGTGG
AGTGGGAGCGGCTGGTGCTCGTCGCCAAGTATCGCGGGCACGTGCGCGTG
CCTGACGCCGGCACGGCCGCTGCCCGCAGCGTCGCAGGCGAGCCCGCTGC
GCCGGCTGGCGGCAGCGGCGCTCAGGTGGACGACTGCGCCGTGTGCCTGG
AGCCGCTGCACTCGCGCATCTGGGAGCCTGCGGAGACGCCATGCGGGCAC
GTGTACCACGAGGCGTGCCTGAAGGCGTGGCGGCGCAGCAGCAGCGCCGC
CAGCGCCACCTGCCCCACGTGCCGTGCCGACCTTTGA
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protein sequence of jgi.p|Trimin1|175910

>Trimin1|175910|e_gw1.131.14.1 ID=Trimin1|175910|e_gw1.131.14.1|Name=jgi.p|Trimin1|175910|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp
MIQDAEGIPLDQQRLCWHGTALEGCRTVSDYNMKFCPELCEPTLQLVLML
RGGGCVTGGRFADVADASSISRMAFDDDAPKWRVACPGLNAEGVCSTTWC
RARGEMVIHEVGMGAFTLGDACACPLCRRPFTPVTCAFHDCVWMFEGVKA
GGGAALGSVWREAGDAYERFNTGAEGESGGSMVEWERLVLVAKYRGHVRV
PDAGTAAARSVAGEPAAPAGGSGAQVDDCAVCLEPLHSRIWEPAETPCGH
VYHEACLKAWRRSSSAASATCPTCRADL*
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mRNA from alignment at Contig_131:170108..170944+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13618 ID=mRNA_13618|Name=jgi.p|Trimin1|175910|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=837bp|location=Sequence derived from alignment at Contig_131:170108..170944+ (Tribonema minus UTEX_B_3156 )
ATGATTCAGGACGCGGAGGGCATCCCTCTCGACCAGCAGCGCCTATGCTG
GCACGGCACGGCGCTCGAGGGCTGCCGCACCGTCAGTGACTACAACATGA
AATTTTGCCCCGAGCTGTGTGAGCCCACGCTCCAGCTCGTACTGATGCTG
CGCGGCGGCGGCTGCGTCACTGGTGGCCGCTTTGCCGATGTGGCCGACGC
GAGCAGCATCTCGCGCATGGCGTTCGACGACGACGCCCCCAAGTGGCGTG
TGGCGTGCCCGGGGCTCAACGCCGAGGGCGTGTGCAGCACCACTTGGTGC
AGGGCGCGCGGCGAGATGGTCATCCACGAGGTCGGCATGGGCGCATTCAC
GCTCGGCGACGCGTGCGCGTGCCCGCTGTGCCGCAGGCCGTTCACGCCCG
TCACGTGCGCCTTCCACGACTGCGTGTGGATGTTCGAGGGCGTCAAGGCG
GGCGGCGGGGCAGCGCTCGGCAGCGTGTGGCGCGAGGCGGGCGACGCCTA
CGAGCGCTTCAACACGGGCGCGGAGGGCGAAAGCGGCGGCAGCATGGTGG
AGTGGGAGCGGCTGGTGCTCGTCGCCAAGTATCGCGGGCACGTGCGCGTG
CCTGACGCCGGCACGGCCGCTGCCCGCAGCGTCGCAGGCGAGCCCGCTGC
GCCGGCTGGCGGCAGCGGCGCTCAGGTGGACGACTGCGCCGTGTGCCTGG
AGCCGCTGCACTCGCGCATCTGGGAGCCTGCGGAGACGCCATGCGGGCAC
GTGTACCACGAGGCGTGCCTGAAGGCGTGGCGGCGCAGCAGCAGCGCCGC
CAGCGCCACCTGCCCCACGTGCCGTGCCGACCTTTGA
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Coding sequence (CDS) from alignment at Contig_131:170108..170944+

>mRNA_13618 ID=mRNA_13618|Name=jgi.p|Trimin1|175910|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=837bp|location=Sequence derived from alignment at Contig_131:170108..170944+ (Tribonema minus UTEX_B_3156 )
ATGATTCAGGACGCGGAGGGCATCCCTCTCGACCAGCAGCGCCTATGCTG
GCACGGCACGGCGCTCGAGGGCTGCCGCACCGTCAGTGACTACAACATGA
AATTTTGCCCCGAGCTGTGTGAGCCCACGCTCCAGCTCGTACTGATGCTG
CGCGGCGGCGGCTGCGTCACTGGTGGCCGCTTTGCCGATGTGGCCGACGC
GAGCAGCATCTCGCGCATGGCGTTCGACGACGACGCCCCCAAGTGGCGTG
TGGCGTGCCCGGGGCTCAACGCCGAGGGCGTGTGCAGCACCACTTGGTGC
AGGGCGCGCGGCGAGATGGTCATCCACGAGGTCGGCATGGGCGCATTCAC
GCTCGGCGACGCGTGCGCGTGCCCGCTGTGCCGCAGGCCGTTCACGCCCG
TCACGTGCGCCTTCCACGACTGCGTGTGGATGTTCGAGGGCGTCAAGGCG
GGCGGCGGGGCAGCGCTCGGCAGCGTGTGGCGCGAGGCGGGCGACGCCTA
CGAGCGCTTCAACACGGGCGCGGAGGGCGAAAGCGGCGGCAGCATGGTGG
AGTGGGAGCGGCTGGTGCTCGTCGCCAAGTATCGCGGGCACGTGCGCGTG
CCTGACGCCGGCACGGCCGCTGCCCGCAGCGTCGCAGGCGAGCCCGCTGC
GCCGGCTGGCGGCAGCGGCGCTCAGGTGGACGACTGCGCCGTGTGCCTGG
AGCCGCTGCACTCGCGCATCTGGGAGCCTGCGGAGACGCCATGCGGGCAC
GTGTACCACGAGGCGTGCCTGAAGGCGTGGCGGCGCAGCAGCAGCGCCGC
CAGCGCCACCTGCCCCACGTGCCGTGCCGACCTTTGA
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