mRNA_13605 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352770
Unique NamemRNA_13605
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A835ZJK1_9STRA (Peptidase_M16 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK1_9STRA)

HSP 1 Score: 867 bits (2241), Expect = 7.430e-313
Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 2
Query:   23 MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL 1735
            MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL
Sbjct:    1 MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL 571          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: D8LCU2_ECTSI (Mitochondrial Processing Peptidase alpha subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU2_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.480e-40
Identity = 144/416 (34.62%), Postives = 210/416 (50.48%), Query Frame = 2
Query:  173 MLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNR--DLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGIS--HEDL---LEAATELFGGGAATAGAGAANAAPARAS--KFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGV 1393
            M+  ++     A  AAP       + +S+L+ L++E+ GSP   P+A   PV+KVSTL NG KV + E+G   A+  +VV +GSRDE+  Q+GA+L L  +AYK T  RSS+RL R  D+++ G       GREK +Y ++C PD+A   LSA+AE+V+SP++ PWE+SD                   + A+LS+ +          L  H  S A  + +A+HAAAF  A  LG P         P +++L+                          A+G  +F  +         KA     +G++  HED     EAA E            A ++APA  S  K+VGGE RV +  G+ T V++AFA P+  D  APA++VL ALL ARA  A  P+A   + +Y DAG+
Sbjct:    1 MIRAVSGPVVAAARAAPLRAVVASKGMSSLVPLDEEYMGSPSTMPAAASAPVTKVSTLSNGAKVITRESGQLGATVGVVVGSGSRDESASQSGASLHLEGMAYKLTEARSSIRLMRQADVENVGGNLAASRGREKMVYVSECPPDSAGTVLSALAESVVSPKIVPWEISD-------------------ASAKLSEII----------LQRHGESTAEQVDDALHAAAFGDAFSLGKPL-------TPGLSSLS--------------------------ADGLKEFRGARY-------KAPGITVIGVNVPHEDFKSQAEAALEA-----------ADSSAPAARSPAKYVGGELRVKSDVGS-TSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAA-PSASGFSVSYTDAGL 334          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S3PID5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PID5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.030e-23
Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 2
Query:  266 SLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
            SL+ E PG P  SP SA P P +K++TL NG++VAS ET  + ++  + ++AGSR E    +G + LL  +A+KST  RS LRL RD++D G   G    RE  +YT +CL D     +  +A+++L P + PW++ D +                               V   +L     +  A+L E +H+AA+  ++PLG P + P
Sbjct:   34 SLDMELPGIPPLSPASAQPKPETKITTLANGLRVASEETYGQVSTIGMFIDAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQRE------------------------------VIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCP 213          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S3UY37_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UY37_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.200e-21
Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 2
Query:  266 SLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
            SL+ E PG P  SP SA P P +K++TL NG++VAS ET  + ++  + ++AGSR E    +G + LL  +A+KST  RS LRL RD++D G   G    RE  +YT +CL D     +  +A+++L P + PW++ D +                               V   +L     +  A+L E +H+AA+  ++PLG P + P
Sbjct:   34 SLDMELPGIPPLSPASAQPKPETKITTLANGLRVASEETYGQVSTIGMFIDAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQRE------------------------------VIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCP 213          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A4D9D8T2_9STRA (Peptidase_M16 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8T2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.970e-21
Identity = 114/353 (32.29%), Postives = 158/353 (44.76%), Query Frame = 2
Query:  260 LLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF-APCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAA 1315
            L+ L++E+P  P  +PS       + STL NGVKV S   G K  S  L V AGS  E   + G+ LLL  LA+K T++RS+LRL RDL+  G     + GRE  +Y    LP+ A +AL A  ET LSP+++P+ VS+++         TA A                      D+   AA     L EA++ AA+   +PLGHP +    +L A ++A   A      S+T+                                          G++H  L   AT L  G A     G++ AAPA  S ++GGE R+   S + T V LAF  P    KDA   +VLAA
Sbjct:   36 LVDLDEEYPDLPALNPSGASPFNVETSTLSNGVKVVSTLAG-KTTSVGLSVAAGSLFEVPGEEGSALLLQHLAFKGTSKRSALRLLRDLESVGAAPSALAGRESLLYKVTALPEYAESALEAAFETALSPKITPYLVSELQ---------TAAAA---------------------DMETFAADARLQLGEALYEAAYGENTPLGHPLYHLGSQLTAGSLATYRAKTYGANSITVFG---------------------------------------TGVAHAQLASWATRLADGLAP----GSSKAAPA--SPYIGGEARLKATSDS-TFVGLAFCAP--DGKDAGVLEVLAA 309          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A2R5GCH9_9STRA (Mitochondrial-processing peptidase subunit alpha n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCH9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.520e-21
Identity = 71/217 (32.72%), Postives = 114/217 (52.53%), Query Frame = 2
Query:  245 RALSALLSLEQEFPGSPEASPSALPT-PVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
            R L++  SL+ EFPG PE +P++  T P +KV+TLPNG++VAS ET  +  +  + V+AGSR ET    G + L+  +A+KST  RS LRL RD++D G        RE  I+  +CL D    A+  +++T++ P+++PW++ + ++                              V   DL    A+  ++L E +H AA+   +PLG   + P
Sbjct:   20 RGLASQPSLDVEFPGMPELTPASNKTKPETKVTTLPNGLRVASEETFGQVTALGMFVDAGSRYETDANNGVSHLMEHMAFKSTENRSHLRLVRDIEDIGGQMAAASAREFMIFQGECLRDYVENAVDILSDTIVRPKLAPWDIDEQRK------------------------------VIGYDLENMEANAQSVLTELLHEAAYGSETPLGRSLWCP 206          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S2WSD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD0_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.150e-20
Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  251 LSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF 886
            L A ++   +F  + EA+P+A  +  +  +TL NGVKV S ETG  AA+F + V+AGSR E+    GA+LLL  +A+K T  RS L L R L+  G+    V GRE   Y+A  LP +  A ++ +AET LSP +  W+V + K                      +++VA+       +L   +  P  +L EA+H AAF   +P+G  F+
Sbjct:   17 LCARVAAAAKFSTAAEAAPAASLSVAT--TTLSNGVKVVSKETGAPAATFGVAVSAGSRHESAMDGGASLLLKHMAFKGTTSRSDLALARSLEAEGLSANAVAGRELVYYSASGLPSSLEAGMAGVAETALSPALLDWQVKETK----------------------AESVAF-------ELATQSTDPQTLLTEALHEAAFGDETPMGRTFY 197          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S2SMW1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SMW1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.700e-20
Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = 2
Query:  242 RRALSALLSLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
            +RA ++  SL+  FPG PE +P S    P  +++TLPNG++VAS ET  + ++  + V++GSR E+   +G + +L  +A+KS+ ERS LR  RD++D G   G    RE  IY A+ L D    A+  +A+TV +P M PW+V   ++                              V   +L +  ++P A+L E    AA+   SPLG P + P
Sbjct:   21 KRAFASQPSLDTRFPGIPELTPASEHEKPTMQMTTLPNGLRVASQETYGQVSALGVFVDSGSRYESDHNSGISHMLEHMAFKSSKERSHLRTVRDIEDIGGSIGAASSREYMIYQAETLRDHLETAIDIVADTVCNPAMEPWDVDACRK------------------------------VISYELDDMNSNPQAVLTELFQEAAYGQQSPLGRPLWCP 208          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: W7U357_9STRA (Mitochondrial-processing peptidase alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U357_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.020e-18
Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 2
Query:  260 LLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF 886
            L+ L++E+P  P  +PS       + STL NGVKV S   G K  S  L V AGS  E   + G+ LLL  LA+K T++RS+LRL RDL+  G     + GRE  +Y    LP+ A +AL A  ET LSP+++P+ VS+++         TA A                      D+   AA     L EA++ AA+   +PLGHP +
Sbjct:   37 LVDLDEEYPDLPALNPSVASPFNVETSTLSNGVKVVSTLAG-KTTSVGLSVAAGSLFEVPGEEGSALLLQHLAFKGTSKRSALRLLRDLESVGAAPSALAGRESLLYKVTALPEYAESALEAAFETALSPKITPYLVSELQ---------TAAAA---------------------DMETFAADARLQLGEALYEAAYGENTPLGHPLY 214          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A812L713_9DINO (Uqcrc2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L713_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 1.000e-17
Identity = 133/444 (29.95%), Postives = 180/444 (40.54%), Query Frame = 2
Query:  188 ASQQCKAVAAAPAAQQAGRRA-LSALL-------SLEQEFPGSPEASPS-ALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPAR--ASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDA----------------------RAHDAIHPTAHTLTA---TYGDAGVFALAAA 1411
            A  + ++ A APAA  AG+ + + ++L       SL++ FPG P  S   A PT V +VS LPNG+ V S ++   A++  + +  GSR ET+P  G      +LA+KST +RS+L+L RD+   G     V GRE   YTA    D       A+AET+ +P++  WE                          L +  AW+       L    A+P A + +AVHAAAF  ASPLG          APA A  A      A L+                 +G                K A    V + H  L+EA   L          G    APA+  A K  GGE    T +G VT V L FA      K   A QVL A L                        +A D   P+  T+++   TY DA +F L  A
Sbjct:   14 AGARAQSTAVAPAAGAAGQASFMESMLFDAPRQNSLDETFPGVPAISGELAAPTKV-QVSKLPNGLTVVSQDSHRGASTVGVYLKGGSRTETVP--GTAFAAQQLAFKSTQKRSALKLFRDVDVVGGALSAVAGRETLAYTASGTRDCLSLLTEAVAETLTAPKLDAWE--------------------------LDENAAWTAA----QLAAAQAAPGAAIAQAVHAAAFGEASPLGK---------APATAGQAGVEDVKAYLSAH--------------VQG----------------KNAVLAGVNVDHAQLVEAGDLLL--------LGVPEGAPAKFEAVKPRGGEFITRTDAG-VTEVGLGFAVTGLDAKATLALQVLQAALGTAPPPGLTRGSAKTQISDLLAKIKAGDTALPSGSTVSSGVYTYSDAALFTLTGA 376          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 810 bits (2093), Expect = 2.910e-294
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 1
Query:    1 MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ 1416
            MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ
Sbjct:    1 MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ 472          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.020e-66
Identity = 128/275 (46.55%), Postives = 174/275 (63.27%), Query Frame = 1
Query:  115 VMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVD---------GKELSTHIA----------PARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRG-----EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQV 867
            VMRL++RIARSG +SRREAER+++ G V              ++NGA   +PA+NV   D V+V+         G +  T +             ++W VHK R ELV R D +GR  V +R+  + L D L PVGRLD+ TEGLLLLT+DGDLARK+E P+  + R Y VRV+G++T EKLR M+ GC I+GV YKGM V ++ G     E  N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ +GGVA V + + F++++
Sbjct:  112 VMRLSRRIARSGIASRREAERMVEAGVV--------------MVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRL 372          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7C5SFA6_9PROT (Pseudouridine synthase n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SFA6_9PROT)

HSP 1 Score: 206 bits (524), Expect = 5.120e-60
Identity = 119/239 (49.79%), Postives = 150/239 (62.76%), Query Frame = 1
Query:  121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
            RLA+RIAR+G  SRR AE LI+EGRV              ++NG    +PAVNV+  D V VDG  L +  AP R+W  HK  G +V+  DEKGR  V ER+   G    +  VGRLD  +EGLLLLT+DG LAR+LE P  G  R YRVR FG VT + L  ++ G  I+GVHY  +V  +D  E  N W+     EGKN +IRR+C+HL L VNRLIRTA+GPF+LG++  G +AEV
Sbjct:    7 RLARRIARAGVCSRRAAEELIREGRV--------------MVNGETVTTPAVNVTADDVVVVDGAPLPSP-APVRLWRYHKPCGLIVSERDEKGRPTVFERLP--GDLGRVISVGRLDLNSEGLLLLTNDGALARRLELPATGWTRRYRVRAFGCVTQDALAALRDGLTIDGVHYGKIVAKLDTAEGANVWMTFALKEGKNREIRRICEHLGLKVNRLIRTAYGPFQLGRLKRGALAEV 228          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: W4FXM7_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXM7_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.640e-57
Identity = 115/241 (47.72%), Postives = 149/241 (61.83%), Query Frame = 1
Query:  118 MRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHN-TWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
            MRLAKR+A +G SSRREAE++I EGRV              ++NGA     AVNV+  D V VD K L+   +  RVW  HK  GELV  SD +GR  +L+R+KA+G+   L  VGRLDF TEGLL+LT+DGD AR LEHP   ++R YRV V+G V   KL  ++RG +++GV Y+ M V I+   K   TWL V   EGKN +IR    H+ L + RLIR  +GP++L  +  G V EV
Sbjct:   72 MRLAKRLAMAGVSSRREAEKIILEGRV--------------VVNGAKVNQVAVNVTFDDVVTVDHKTLAARPSKRRVWIAHKLAGELVTSSDPRGRPTILQRIKAMGVESHLMAVGRLDFNTEGLLVLTNDGDYARYLEHPKHAVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMAVKIESTTKDKETWLQVKLTEGKNREIRNAMAHVRLVLKRLIRVEYGPYRLADLNKGNVLEV 298          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A537NY95_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NY95_9PROT)

HSP 1 Score: 199 bits (507), Expect = 3.610e-57
Identity = 115/253 (45.45%), Postives = 155/253 (61.26%), Query Frame = 1
Query:  121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP---LHEQFLKQVN 870
            R+AK IAR+G  SRR+AERLI EGRVK              +NG V +SPA+NV   D +R+DG+ L      +R+W  HK  G + +  D +GRR V + ++       +  +GRLD  TEGLLLLT+DG+LAR LE P  G  R YRVR +G      L  ++ G  IEGVHY  +   ID+ +  N WL +   EGKN +++++C+HL L VNRLIRTAFGPF+LG +  GG+AEVP   L EQ  ++V+
Sbjct:   22 RIAKAIARAGLCSRRDAERLIGEGRVK--------------LNGKVLVSPAMNVKPGDDIRIDGQPLPQK-EESRLWRYHKPAGLVTSHKDPEGRRTVFDALREQ--LPRVISIGRLDINTEGLLLLTNDGELARLLELPATGWVRRYRVRAYGHPDPAALEKLKGGITIEGVHYGPIEAKIDKAQGDNAWLNIAIREGKNREVKKICEHLGLQVNRLIRTAFGPFQLGDLERGGIAEVPAKVLAEQLGRKVS 257          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A2W2BBS9_9HYPH (Pseudouridine synthase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BBS9_9HYPH)

HSP 1 Score: 197 bits (502), Expect = 1.220e-56
Identity = 116/259 (44.79%), Postives = 159/259 (61.39%), Query Frame = 1
Query:  121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP-------LHEQFLKQVNTA 876
            R+AK IAR+G  SRR+AERLI EGRVK              +NG V  S A NV+  D + VDG+ L +  A  ++W  HK  G +V+ +D +GR  V E+++       +  +GRLD  TEGLLLLT+DG+LAR LE P  G  R+YRVR FG V    L  +++G  +EGV Y  +   I+R +  NTWL +   EGKN +++R+C+HL L VNRLIRTAFGPF+LG++  GG+ EVP       + E+F K+ + A
Sbjct:    8 RIAKVIARAGVCSRRDAERLIGEGRVK--------------MNGKVLTSAATNVTAKDVILVDGQPLPSKEA-TKLWRYHKPGGLVVSNNDPQGRPTVFEKLREQ--LPRVVSIGRLDINTEGLLLLTNDGELARFLELPATGWTRKYRVRAFGHVNEASLTKLEKGVEVEGVRYGPIEAKIERVQGDNTWLTIAIKEGKNREVKRICEHLGLQVNRLIRTAFGPFQLGELPRGGIEEVPTRAMKSSIGEKFFKKEDDA 249          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A6G6WY02_9HYPH (Pseudouridine synthase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WY02_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 1.610e-55
Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 1
Query:  121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP---LHEQFLKQV 867
            R+AK IAR+G  SRR+AERLI +GRVK              +NG V  SPA+NV  +D VRVDG+ L      +R+W  HK  G + +  D +GRR V + ++       +  +GRLD  TEGLLLLT+DG+LAR LE P  G  R YRVR +G      L  +  G  +EG+HY  +   +D+ +  N WL +   EGKN +++++C+HL LTVNRLIR AFGPF+LG +  GG++EVP   L EQ  ++V
Sbjct:   15 RIAKAIARAGLCSRRDAERLIADGRVK--------------LNGKVLSSPAINVKPSDDVRVDGQPLPQK-EESRLWRYHKPAGLVTSHKDPEGRRTVFDALREQ--LPRVISIGRLDINTEGLLLLTNDGELARLLELPATGWVRRYRVRAYGKPDPAALARLAGGVTLEGIHYGPIEATLDKAQGDNAWLNIAIREGKNREVKKICEHLGLTVNRLIRIAFGPFQLGDLERGGISEVPAKVLAEQLGRKV 249          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A521DN63_9RHOB (Pseudouridine synthase n=1 Tax=Thalassobius litoralis TaxID=1010611 RepID=A0A521DN63_9RHOB)

HSP 1 Score: 197 bits (502), Expect = 1.710e-55
Identity = 114/239 (47.70%), Postives = 153/239 (64.02%), Query Frame = 1
Query:  121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
            R+AK IAR+G++SRREAERLI+EGRV               +NG    SPA+NV+  D + VDGK L     PARVW  HK  G +    DE+GR  + +++   GL   +  VGRLD  +EGLLLLT+DG++ RKLE P  G  R+YRVRV G V+ EKL  +++G   +GV+Y  M+V++DR +  N WL V   EGKN +IRR  + +  TVNRLIRT++GPF+LG++  G V EV
Sbjct:   10 RIAKIIARAGRASRREAERLIEEGRVT--------------VNGKQITSPALNVTARDTITVDGKPLEA-AEPARVWLYHKPAGLVTTNRDEQGRATIFDKLPD-GLPRVMS-VGRLDLNSEGLLLLTNDGEVKRKLELPATGWLRKYRVRVNGRVSEEKLEPLRKGITHDGVNYLPMIVSLDRQQGANAWLTVGLREGKNREIRRAMEAIGFTVNRLIRTSYGPFQLGQLKPGEVEEV 231          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A1T4SUE8_9HYPH (Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SUE8_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 2.100e-55
Identity = 118/245 (48.16%), Postives = 150/245 (61.22%), Query Frame = 1
Query:  112 EVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLH 846
            E  R+AKR+AR+G  SRR+AER I  GRVK              ++G V  +PA  V+ A R+ VDGK L T   P R+W  HK  GELV   D +GRR + E +   G+   +  VGRLDFM+EGLLLLT+DG LARKLE P     R YR RV G+V  E+L  + +G  IEGV Y  +  ++DR ++ N WL +   EGKN ++RRV  HL+L V RLIR AFGPF LG++  G V EVP H
Sbjct:    3 EPERIAKRLARAGLCSRRDAERWIAAGRVK--------------VDGKVLDTPAFVVTDASRIEVDGKPLPTADRP-RLWLYHKPPGELVTARDPQGRRTIFESLPK-GMPRVVT-VGRLDFMSEGLLLLTNDGGLARKLELPANAWTRRYRARVHGAVDEERLAELAKGITIEGVRYGAIRASLDRQQRSNAWLDIALTEGKNREVRRVLGHLDLPVVRLIRVAFGPFHLGQLERGVVEEVPPH 230          
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A485L9R2_9STRA (Aste57867_18304 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9R2_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.810e-55
Identity = 107/240 (44.58%), Postives = 146/240 (60.83%), Query Frame = 1
Query:  118 MRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
            MRLAKR+A +G SSRR+AE++I EGRV              L+NGA   + A NV+  D + VD K LS      RVW  HK  GELV   D +GR  +++R+K +G+   L   GRLDF TEGLLLLT+DGD AR+LEHP   + R YRV V G V   K+  +QRG +++G+ Y+ M V I+  +  ++WL +   EGKN +IR+   H+ L V RL+R  +GP++L  +  G V EV
Sbjct:   64 MRLAKRLAMAGVSSRRDAEKIILEGRV--------------LVNGAPTTNVATNVTMRDLISVDEKPLSARPTKRRVWMAHKLAGELVTTHDPQGRPTIMDRIKRMGIQSHLM-AGRLDFNTEGLLLLTNDGDYARQLEHPKYEVTRVYRVLVRGQVLPSKIEELQRGALVDGIKYRPMQVKIESTKDKDSWLQIKLTEGKNREIRKAMAHVRLIVKRLVRVEYGPYRLADLTKGHVLEV 288          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJK1_9STRA7.430e-313100.00Peptidase_M16 domain-containing protein n=1 Tax=Tr... [more]
D8LCU2_ECTSI2.480e-4034.62Mitochondrial Processing Peptidase alpha subunit n... [more]
A0A7S3PID5_9STRA8.030e-2333.33Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S3UY37_9STRA1.200e-2133.33Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A4D9D8T2_9STRA2.970e-2132.29Peptidase_M16 domain-containing protein n=1 Tax=Na... [more]
A0A2R5GCH9_9STRA6.520e-2132.72Mitochondrial-processing peptidase subunit alpha n... [more]
A0A7S2WSD0_9STRA3.150e-2034.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SMW1_9STRA6.700e-2033.03Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
W7U357_9STRA1.020e-1836.36Mitochondrial-processing peptidase alpha subunit n... [more]
A0A812L713_9DINO1.000e-1729.95Uqcrc2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]

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BLAST of jgi.p|Trimin1|352770 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDT5_9STRA2.910e-294100.00Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
D8LDE8_ECTSI1.020e-6646.55RNA pseudouridylate synthase domain-containing pro... [more]
A0A7C5SFA6_9PROT5.120e-6049.79Pseudouridine synthase n=1 Tax=Thermopetrobacter s... [more]
W4FXM7_9STRA1.640e-5747.72S4 domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A537NY95_9PROT3.610e-5745.45Pseudouridine synthase n=1 Tax=Alphaproteobacteria... [more]
A0A2W2BBS9_9HYPH1.220e-5644.79Pseudouridine synthase n=1 Tax=Aestuariivirga lito... [more]
A0A6G6WY02_9HYPH1.610e-5544.44Pseudouridine synthase n=2 Tax=Hyphomicrobiales Ta... [more]
A0A521DN63_9RHOB1.710e-5547.70Pseudouridine synthase n=1 Tax=Thalassobius litora... [more]
A0A1T4SUE8_9HYPH2.100e-5548.16Pseudouridine synthase n=1 Tax=Enhydrobacter aeros... [more]
A0A485L9R2_9STRA2.810e-5544.58Aste57867_18304 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:81091..90656 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352770|estExt_Genemark1.C_Ctg_1310011
DescriptionMitochondrial-processing peptidase subunit alpha. Source PGD
COG categoryO
Max annot lvl121069|Pythiales
EggNOG OGsCOG0612@1|root,KOG2067@2759|Eukaryota,1MFUT@121069|Pythiales
Evalue7.22e-21
Seed ortholog65071.PYU1_T007564
Hectar predicted targeting categoryother localisation
TranscriptId353092
TrackFilteredModels1
ProteinId352770
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352770gene_13605Tribonema minus UTEX_B_3156 geneContig_131 81091..90656 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352770Trimin1|352770|estExt_Genemark1.C_Ctg_1310011Tribonema minus UTEX_B_3156 polypeptideContig_131 81186..90634 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13605_14exon_13605_14Tribonema minus UTEX_B_3156 exonContig_131 81091..81328 -
exon_13605_13exon_13605_13Tribonema minus UTEX_B_3156 exonContig_131 81648..81956 -
exon_13605_12exon_13605_12Tribonema minus UTEX_B_3156 exonContig_131 82709..82912 -
exon_13605_11exon_13605_11Tribonema minus UTEX_B_3156 exonContig_131 83470..83541 -
exon_13605_10exon_13605_10Tribonema minus UTEX_B_3156 exonContig_131 84150..84194 -
exon_13605_9exon_13605_9Tribonema minus UTEX_B_3156 exonContig_131 84346..84544 -
exon_13605_8exon_13605_8Tribonema minus UTEX_B_3156 exonContig_131 84813..84896 -
exon_13605_7exon_13605_7Tribonema minus UTEX_B_3156 exonContig_131 85243..85353 -
exon_13605_6exon_13605_6Tribonema minus UTEX_B_3156 exonContig_131 86288..86339 -
exon_13605_5exon_13605_5Tribonema minus UTEX_B_3156 exonContig_131 86929..87059 -
exon_13605_4exon_13605_4Tribonema minus UTEX_B_3156 exonContig_131 88209..88308 -
exon_13605_3exon_13605_3Tribonema minus UTEX_B_3156 exonContig_131 88611..88735 -
exon_13605_2exon_13605_2Tribonema minus UTEX_B_3156 exonContig_131 90090..90182 -
exon_13605_1exon_13605_1Tribonema minus UTEX_B_3156 exonContig_131 90587..90656 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13605UTR3_13605Tribonema minus UTEX_B_3156 three_prime_UTRContig_131 81091..81185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13605CDS_13605Tribonema minus UTEX_B_3156 CDSContig_131 90587..90634 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_13605UTR5_13605Tribonema minus UTEX_B_3156 five_prime_UTRContig_131 90635..90656 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1833bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAAACATTCAGTACAGGGCATCATGAAGCTGGGCAGGATCGGCGGGTGGC
TTCTGAATGACGCGCTGGCGGGCTGGCGGCAGGGGGCTGATGCGGCAAGG
TGCGTTGACTTGGAGTACGAGGGCGTGCATCATAGCGCTGCACACGAGCT
GCGCGGCGCGGGAAGAGTGGCGATGCTGAGCAGACTAGCCTCGCAGCAGT
GCAAGGCGGTGGCCGCGGCGCCGGCGGCGCAGCAGGCTGGCAGGCGCGCC
CTGAGCGCTCTCCTGTCCCTGGAGCAGGAGTTCCCAGGGTCACCTGAGGC
GAGCCCCTCAGCCCTGCCCACGCCTGTGAGCAAGGTCTCCACTCTGCCCA
ATGGCGTCAAGGTGGCGTCTCTGGAGACTGGCGACAAGGCCGCCAGCTTC
AGCCTCGTTGTGAACGCGGGGTCGCGCGACGAGACGCTGCCGCAGACGGG
CGCGACGCTGCTGCTGTCGCGCCTCGCGTACAAGTCCACGGCGGAGCGCT
CGTCTCTGCGGCTTAACAGGGATCTGCAGGACGCCGGCGTGATTTACGGC
TGCGTTGGCGGGCGCGAGAAGACGATCTACACGGCGCAGTGCCTGCCCGA
CGCGGCGCCGGCGGCGCTGTCCGCGATCGCGGAGACGGTGCTCTCGCCAC
GCATGTCCCCGTGGGAAGTGAGCGACATCAAGCGCCGCGGTGACAACGCT
CAGCCACGCACAGCCCCCGCGGTGAACCCCCGCAGCGACGCACGCCTCTC
GCAGGCAGTCGCTTGGAGCAAGATGGTCGCGAAGATCGACCTCGTGGAGC
ACGCGGCAAGCCCCGCGGCGATGCTCCTGGAGGCAGTGCACGCCGCCGCG
TTCGACCCCGCGTCGCCGCTGGGCCACCCCTTCTTTGCGCCGTGCGAGCT
GGACGCGCCCGCGGTGGCAGCGCTCGCCGCGGCGCGCAGCGCGCCCGCGT
CACTGACGCTCGCAGCGCTCGCCGCGGCGCGCACCGCTCCCGCGTCGCTG
ACGCTTGCAGAGGGCGCGCTCGACTTCAGCCACAGCGGTGTGCCCATGTG
GCCGAGGGCGGCGAAGGCAGCCAGCCGCCCGTGCGTGGGCATCTCGCACG
AGGACCTCCTTGAGGCCGCGACGGAGCTCTTTGGCGGCGGCGCGGCGACC
GCCGGCGCCGGCGCCGCCAACGCCGCGCCCGCGCGCGCGTCCAAGTTTGT
CGGCGGCGAGCACCGCGTGCACACCAAGAGCGGCGCCGTGACGCACGTCG
CGCTCGCGTTCGCCGGCCCCGCCGCCGGCGACAAGGACGCCCCCGCCTTC
CAGGTCCTCGCGGCGCTCCTCGACGCGCGCGCGCACGACGCCATTCACCC
CACCGCGCACACGCTCACGGCGACGTACGGCGACGCCGGCGTCTTTGCTC
TCGCCGCCGCGGACGCCGCGGACGCCAGCGCCGCGCTCGCGGCGTCGCTC
GCGCGCGCCGTCGCCGCCGCCGCCAAGGCCGCGCCGCCGGCGACGGAGCT
CGCCGCGGCCGTCGCGCTCGCGCGCGTGCGCGCGCTGGCGGCGGCGGCGG
CGCCCGCGGGCGCGGCGGCGGCGCTCGCGGCGCGCGCCACGTCAGGCGCG
GCAGCGGGCGTCGACGGCGTCACCGGCGAGGCCGTGCGCGCCGCCGCCGC
CAAGCTGGCCAAGGGCCCCATGGCGCTGGCCGCCGTCGGAGACATGCGCG
CGGTGCCGCGGTTGGACACGATCAAGGGCTTGCTCTAGCCGCCGCCGCCG
ATGATGACGGGCGACGGTGCGCTCTGGGGCTGCGGAGCTAGTGTGCGGGG
GGCTTCTTGCGGAGACTTTACGTATGGGGTGGT
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protein sequence of jgi.p|Trimin1|352770

>Trimin1|352770|estExt_Genemark1.C_Ctg_1310011 ID=Trimin1|352770|estExt_Genemark1.C_Ctg_1310011|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=572bp
MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVA
MLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPT
PVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSR
LAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALS
AIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSK
MVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAA
LAAARSAPASLTLAALAAARTAPASLTLAEGALDFSHSGVPMWPRAAKAA
SRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVH
TKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTA
TYGDAGVFALAAADAADASAALAASLARAVAAAAKAAPPATELAAAVALA
RVRALAAAAAPAGAAAALAARATSGAAAGVDGVTGEAVRAAAAKLAKGPM
ALAAVGDMRAVPRLDTIKGLL*
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mRNA from alignment at Contig_131:81091..90656-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9566bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )
CAAACATTCAGTACAGGGCATCATGAAGCTGGGCAGGATCGGCGGGTGGC TTCTGAATGACGCGCTGGCGGTACGTTGTTCCTTCTACGCTCTCACTGCT GCCGAGGTCGGCCTGCAGGCCGAGGCAGCAGCAGCTCATCCTCGGCATTT CCTCGGCCACCAGCTGTGACTTTCTTGTGGGGGAAGCAGTGGCAGTCTAT GTAGAGTGTGCAGCGCACCCTGCCGACACAGTGGCAACTCATGTAGTCAG CATAGCCAGGGATGCTGTTGGCGGAGAGCTCCTACGCAGCGGTGGGCGTC GTTGGCAGCACTTCTCCGGTCCTGCTGGTGCTGCTGTCGTGTTGCGGCGT GCGCGCGGAGGATCGACGCCATACACGACGGCTTGCTTGCTGGTGTTGTG TGCACAGGTTCAGGAAGGGCGCTGTCACCTCGGGGGCGGGGCAGGCGCTG CCAGCACCGCGCGGGTCGTAGCAGGGCTGGCGGCAGGGGGCTGATGCGGC AAGGTGCGTTGACTTGGAGTACGAGGGCGTGCATCATAGCGCTGCACACG AGCTGCGCGGCGCGGGAGTCCGTGCACGTTGAACAAGTTTAGGTCCAAGC TGTCGCAAGTGCGCAGCGATCATCACAACATGCGCTGCTTGGCGGCCGCG CAGGAGCGGTGAGTGTGTGCGGGAGCAGAGAGCTACTGCTCCACGTCGTA GACTGCTGGCGCGGTGGTCAGCGCGCTGCTGCCTGTTACGCGCATTGCTG TCGCATGCCATGATGTGAGCGTGGATCCTGTGAATGATAGATTCAAAGCG CACTTGTTGTCGTGCTCTGAGCTGCCCTGCCGCACGTTGTCTTGCGCACG CGTTGCCTGTTGAGAGCTTGAGCGCATGCTGCATGACTGCCCATGTAGTG GTAGGATCAGAGACAGAGACAGCTGGTAGTATGCTTGCTATGTTGATTGT GGCCGTGTCTTGTGTGCCTGCGTATGATGGCGTCTTGTCAGGTTATGGGT CTGGTTCGATGCTGATGTTCGCTATTGCAGCACTATGTGTTTTGTGGCAA GGCAGCACAGACCAGGGTGCTTGTATGCTCAACACATGTCAGGTGGTGCT GTTGGATGTTGTCATGTGAGCTCCAGTTTGCATGAGACCGTGAGGGTTGT ATTTCGGTTCGTGTTTTGTGCCAGATAGACGATTGTTAGTGCACAGGAAG CTAGATGCAGTGTATGTGCACAATCATGTTGTCTGTGTCGTTTGTGGATT AATTCTTGCTTGGTGGCCATTCAGTGCATCAAGACTTTGGTCATTAATGA GTGCGAGAACATGCAGATGATAGAAGTGTGGAGTTGCTGCAAGAGCGGGT TCGATGACTTGACATGTAAAGTGGCGCACAGGGAGCTTGATTATACTGTC ACAGGTGATATCGCATGTAGCAAGCGCACTGACATTTATCATACAACATG CAGTTGGCGAAACAGATCTGGCAAGGCACAGTGCTGACCAGGGATGTATT TGTGTTGCGCCAGGTGGCACTTGTCAATGATGCGCAACTGTCCCTGTATT GAGCATGCAGGTCACGTCCCTGGTGCACGTGACATGCAGAGCACACGTGA CATATAAGCAGCCGGCGCCATCCTGGCTCGTATTTTTGCGCAGCTAGGGT CACTGCTTGCTGGCTTGGTGCCGGCTGCTCCCGGAGCATGTCAACAAGCA AGATGACAGATGCAAGTATATCATTTGAATAATTATGCACGTAGACATCG GCTACTGCTGGCGGGTAAGTGTAGGAAACTATCATTGGCCACAACGCTCC ATGAGAAGGCTTGGCTTGGTTGCTGTGGATCCAGACATGAATACATATGT CAGTTTCATGCTCAAGTGGAAGCCAGAACACGCAAATTAACGTAAGTCAC TCCCTACACCTGTGCTAGCAGAGAGTGGCGATGCTGAGCAGACTAGCCTC GCAGCAGTGCAAGGCGGTGGCCGCGGCGCCGGCGGCGCAGCAGGCTGGCA GGCGCGCCCTGAGCGCTCTCCTGTCCCTGGAGCAGGAGTTCCCAGGGTGA GGTTTCTGCCTAAGCGATGTCCGCACTGCAATCCGTGTGCGATGGCATGG GGATCTTTGGTATGTTCCAGTAAATGCACATTGGGCTTGCAAGAGCTGCG CCTGTGCTCCCAGAGTTTGGTCTGGTGTTGCGGCTGACTCTCGTTGCGCG CTGGCAAGTCGTGGCGTGTGCTCGATCACTGCAGCAGTGTCTGAACCTGT TGCTGCCGGCCACTGGGCACTAGTATATCATGAGATTTCGAATGTCGTAG ACGGGGACTGTTGGTCATCGACATGTGTGTATACTTGTTGTCGTCTAGGT CACCTGAGGCGAGCCCCTCAGCCCTGCCCACGCCTGTGAGCAAGGTCTCC ACTCTGCCCAATGGCGTCAAGGTGGCGTCTCTGGAGACTGGCGACAAGGT GATGCAGAATGTGTGCTTGCTTCATGATATGGTCATTTGAGGTGTAACCA GAAGTCTCTTGATGAACCCAATTTTTGCTACTGTTCCGCTTCAAGGACCA TCTGATGTGATGGAAGGCGTCACCATGTCTCCTCCTGCTTGACCAGTGTT TTTTGTCAATGCGCGCAAATACACACAATGATATTGGCCAGTGCCTGCAG CGCCTGACCATGAGATCACTGACTGAGAGCACCAACTCGGAGTACAGCGT TGAAGCACAGTCTGTTCGATGCACTGCAGTTGCAGTCATACAACTCATGC AGCAGCAGGACTGTCTCATATCGCAGTGCCCGCAAGGCAGCGAGCATGCT GCGCTTTGCATTCTACCGCGCCATCATGCCTCGAGGGCGCGATCGGCGCA CACGTGGCATGCAGCGATTGCCCGTTGCCCTATTCCCCGACTTCCGTCGG TGACGCTCCTGAACGACACAAAGACATACATACCGTAGTGGCGTATGCTG CGTGCGCTATGATGTTCAGAAGCTCAGGTACATCGTAGCAGCCTCTTATA ATAATAACACTCGCTCTAGGTGCCACTCGATGCGCATGGCCTCGGAATTT GTGGCTACTGTTATCTGCGGCCCATGCCTTCAAAGCAAATCTCCGGTCGT TCGTTGCACCTGCAGCTGTCGTATAATCAACAAGCTGCCATCAGCAGCAC ATGGGTTTCCAGTGTGTGCGTCGGAGCTTTGTTTCAGGGGCAGCAACGTC ACATCTCCAGCTGCCATGCGCAACTCGTACGGCGACGGCAGACCGCACGT ACCTGTGCTAGCAGCGGCAGATTGTGCATCTCCGCGACCGCAGGGCGTTG TCACACGCTCGTGCTGCGGTCCGCAGCGTAGGCGATGACCAGACATCACA TGAACTTCAACTTGAAGTTTTGTAGAAGCTTAAAGTATGTCAGCTTCGAT AGCCGTTTGCTATCGTCAGTGCGCTTCTTTTGAGGCTGCCAGGATACGCC ATGGCAACGATGGCAACGGCCTCCGCTGCGCTTTTCCGCAGAGGCCATGC GCCATGGCTAGTGAAACTCATATACGCCTGCCTGCTGCAGTTTGTCTTGA GCATCGTCGCCACCGCTCCCTCCCGTGCTCGCGTGAGTGCACCGCAGGCC GCCAGCTTCAGCCTCGTTGTGAACGCGGGGTCGCGCGACGAGACGCTGCC GCAGACGGGCGCGACGCTGCTGCTGTCGCGCCTCGCGTACAAGTCCACGG CGGAGCGCTCGTCTCTGCGGCTTAACAGGTAACGCAGATTGTGCATTTTG CCCTTATCGTAGCAAGACTGCATGATAGACGCTGCTGCTGTCGCGCCTCG CGTGCAAGTCCACGGCGGAGCGCTCGTCTCTGCGGCTCAACAGGTGACGC AGAGCATGCATTTTGCCCTTATCGTAGCAAGACTGCATGATAGACGCTGC TGCTGTCGCGCCTCGCGTGCAAGTCCACGGCGGAGCGCTCGTCTCTGCGG CTTAACAGGTGATGCAGAATATGTGCATTCGCTCGTACGTCAGCAAGACT GCTTGATAGAGAGCTGTGCGATGGCACGAGCATTTGCTGTATAGTAGCAA GACTGCATGATAGAAAGCTTTGTGGCAGGACGAGCAGGTGGATGGCACGC GGCTGCTGGCGCGCCTCGCGCAAAAACTTGAATTCGAGTCAACGGCACAG CGGTCGTCACTGTGGCTCAGCAGGTGACGCGCTTGAGCACGTATATTTGC TGTATGACACTGTTGGCTGTCGCCGCTGCTGCGCTGCCGCTGCGGGCTCC TCGCTGTGCCGCCAGCGCTCACTATGGCGCCGCCGCTGCTTCTGCTGCCG CCGCCGCTGCCGCGCAGGGATCTGCAGGACGCCGGCGTGATTTACGGCTG CGTTGGCGGGCGCGAGAAGGTGAGCACTGCCACCAGCGCTGAGCACTGAC ACTTGCCGCCTCCACGGAGTGGCAGCTGCAGTGCCGTCGCCGTGCTCTGC AGCGCCCGTGTGTGTGTGTGTACATCGGTGTATGGAGGCGGGATGTCATG GGGGGGGGGGGGGGGGGGCGCAGATGCCGGGGAGTGTAGACGGCTGCCTG TCAATCGTGCGCACGCAGAGCGGGGGGAGGGGGGGGAGGGGGTGAGGCTG GCCCTCGCCACGTGCTGAGTGCAGCGGCATCAATATGCTCCTTTGTTGCG GGTGACGCGTGGCGGCGACGCAGCATGTCAACTTTTTAACAGGTGCGCAG TTGGGAGGGGGGAGGGGATGGGCACCGGAGTCAGAACACCGGAGTCTCTT TCGGTACATGCAGGTGGGGGGGGTGCGGGGGGCGCCAGAGTGTCGCGGTA CGCGCTGGCGCCGCTGCAACGTTCACTTCCGGGGCATCGCGTTGGTGCTC AGCGCTGCGGCTGACTGCGGAGGTTGGCCTTCAGTGTTGCCAGTCGTGGT CGCTTCTGAGCGGCGTGCGGCATTGCACAGGTGCTCAGCGCTGCGGCCGA CTGTCACGGTTGGCCATCAGTGTCCCAGTGGTGGTCGATTCTGCGCGGCA TGCAGTAAGTGAAAGGATGGAAAGCGCAGCAGCGCGCGGCACGCAGCCAA CCAGCGCCTGTTCCGCGCTTGACCGCCGCGGCGCAGCGTCCGCACGGCTG GCAGCATGGCTGCTCCAGGGACGTACACTCTTCCGCTTCGCATGCTGCCA TGTCAAGTGGCGAAACCGCAGGTTTTACAACCACGCACCTTCCGCTGCAA CCTCGGCGCAATCATCCAGGCGGTGGCGCATATCGCTGACATTGCATGCA CTTGCACCCCCACCCCCCACCCCCGCGTACGCACTTGCTGCCGCGTGACA CAGACGATCTACACGGCGCAGTGCCTGCCCGACGCGGCGCCGGCGGCGCT GTCCGCGATCGCGGAGACGGTGCTCTCGCCACGCATGTCCCCGTGGGAAG TGAGCGACATCAAGGTGACACGCACCGCGTGCCGTCATCCGCCCTGACGC ACAGTACCGCGCTACAGTAGTTGCACGCCGTCGCAGTGTATGCGCGTGCT TCTGCGTGCACAGAAAATGCATTGTTGGACTTGGCGGCGCGACGCGCCTC TGAGTCATGAGGAGAGCACTGCATGTAATACAGAAGGGTTAGACTGGCGG TGAGCCCTCACATCATAGAGCGCGCCCCTCTGAGTGCTGGGGTCAGCGCT GCACGAGATACAGCATGATTAGACTGGCGACGAGCCCTTAAATATATTGA GCAGCTTATGGTCACTCTGCGTGTGCGCTCGCCGTCGTGGACGCCTCTTG CGCGCCGCAGCGCCGCGGTGACAACGCTCAGCCACGCACAGCCCCCGCGG TGAACCCCCGCAGCGACGCACGCCTCTCGCAGGCAGTCGCTTGGGTCGGG GCGCGCATCAACCGCGCTTTGTCTCTCAATCCCGCATTACACTTTTTCTC AACTTTGTCGACCGTCACGCCCTGCTTCTGCCCCCGCTGCCTGCCCCCGG CGCAATGCCGAGCAAGATCACCGCGAAGATCGACTTCGCAGAGAACTCGG CGAGTCCGCAGCTGCCTTGTCACCCAGCACAGAGTAAAACTGCTCACTCC CAAGTGCAAGTCATCTAAGCGTTCCCTGGGTTTTGTTGACCATCACCCCC CCCCCATCGCAGAGCAAGATGGTCGCGAAGATCGACCTCGTGGAGCACGC GGCAAGCCCCGCGGCGATGCTCCTGGAGGCAGTGCACGCCGCCGCGTTCG ACCCCGCGTCGCCGCTGGGCCACCCCTTCTTTGCGCCGTGCGAGCTGGAC GCGCCCGCGGTGGCAGCGCTCGCCGCGGCGCGCAGCGCGCCCGCGTCACT GACGCTCGCAGGTGACCACACGCTGTTTACGTAGAGCAACTGCGTATGTA TGTACATAATAGACAAGTCATACTTCAAGAAGTATGTAGTAAATATATAT ATAGTCGTTGCCGCAGCACCCGTTCTTTGCGCCGTGCGAGCTTGACGCGC CCGCCGTGGCAGCGCTCGCCGCGGCGCGCACCGCTCCCGCGTCGCTGACG CTTGCAGGTGACCGCACGCTGTTTACGTAGAGCAACTACATAGTAACTAC ATATACATGTAGGCTAGTTCTACTTCAAAGTAGGAGTCTGTAGTAACTAT ATGTACTCGTAGCAGCGGTTGCGGCGACCACGGTTAGTGGTGGAAGGCAT TTGCGGCCGACCGCGCCCTGTCACCTAGACCTCTACGATCTTTTGATGCG TTTCCATATACTTCTAGAAGCTGTGCCTCTAGGAGCGAACGTCTGCGGCG TCTTCGTGTGTAGCCCCCCCTGCCCCCCCCCCCCCCCCCCCCCGTCCGAT GACACTACAGAGGCGCACATGCTGGACACAGAATTCAAGGCGCACCTGGC AGACACTTGGGGGGGGGGGGGGGGGGGGGTCACTCCTCATGCGAGCGTGT TGCGCACGGCGGTGCCGCGGCGACGCGGACGCTGCCACACGGGGCTCCTG GGGGGTCAGGCCCCCCACGCACTGCGCCGCGCACAGGGTGCCGGGCGACA TCGATGTCAACAACAAGAATTGCACTTTTGTCAACGAGGGGGGCGCCCCG TGCCTGAGCCGGCCAACCTGCGGCGTGCCCGGCGGCGACGCCGCGCCCCC GCCCCCCCGAGACAGAGGGCGCGCTCGACTTCAGCCACAGCGGTGTGCCC ATGTGGCCGAGGGCGGCGAAGGCAGCCAGCCGCCCGTGTGGGTAGGGGGG GGGGGGGGCGTCCAGTGCACAAGGCAGCTGACTGCCCCTTGGCGTGCCGT GGAGGTCAGCTGTTTTGTGCAATGCCCCCCCCCCTCCCGTGTCCACAGAG GTGCACTTCGTGTTTTTGACATTGATGTCCCCCGGCGTCCTGTGCGCGGC GCGGTTTCTGGGGGCCCCACCGCCGGCAGCCGCGAAAACCATCAAAAACA CCTCCATGCCACGAATGGTGGCACTGCTTGAACTCTGGCCAATGGCTGCA GCGGCGACCACGGGGGGGTGGTGGAAGGCACTTGCGGCTAATCACACCTC GTCACCCAGAGCTCTACGATCTCTTGATCCGTTACCATAAATGCTCATTG GCCAATGGCCGCGCCGCGATCGCTCGCGCGCGCGCGACGCAGGCGCGGGC ATCGCGCACGGGGACCTCCTCGAGTGCTGACAGCAAATTGCACGCCTGCT TCGCGCGCGAAGCGTCTCTCAACCACCAGAAGCATATACTCACCGTAAAT CCTCATGCATCGACGGCCGCAATCGTTCGCGCGCGCGTGCGCAGGCGTGG GCATCTCGCACGAGGACCTCCTTGAGGCCGCGACGGAGCTCTTTGGCGGC GGCGCGGCGACCGCCGGCGCCGGCGCCGCCAACGCCGCGCCCGCGCGCGC GTCCAAGTTTGTCGGCGGCGAGCACCGCGTGCACACCAAGAGCGGCGCCG TGACGCACGTCGCGCTCGCGTTCGCCGGCCCCGCCGCCGGCGACAAGGGT ACGTATACGCTGCGTGTACGTAGTGAATACCACCGACCCGTGACGGCAGG GGTTGCGCGCTGTGGCGTGCTATTTTGATGGTGTCAATGCGGTGCGTGTG CCGCCGACGCGATGCGTAGAGCAGTACTGCGTGCGTGCGCGCTTCTCGAT TGGTGTTAACAGTGAAGCGCCGCTCGACAGCGGCGCAATCGGCGGTCAAG ACGCCCTTGCTACCGCCTCATGAATGTACAGGACGCCGTGCCTCGCGGTA GCATTTTTGGCCTCCAAGCTAATGCGTGCAGCAAATCAGCAAGCGCGCGC GCGCGCTTACCTCAAACTCCTCTTGCTCATACGCCATGTGTGCACCAGCA AGCGTGATGCTGGCATTCGCCAAAACCGCTGCCGGGGGGGGGGGTTTGAG CAAATGCGGCCAAATGAGCGCAGCAGATGCGGCCAAGCAAGCAGTCGAAC CACTAGTCCCCGTCGTGTACAACACAGGTGGCGGTTGCAACACGCAGCAG TGGCACGCCCGCACCACCTGGCCTCGCGCTGCTGCCGAACGCCCGCTGCG TGAATGCCCGCTGCGCTGCAGCGCCCAGCGCTGTGCAGCCGCGCCGCTGC GCACACAGTCGCAACCGCCAGCTGCACAGCCTGCCGCATTCGCCTCAAGC CTGTAGCACACACTCCCTTCTGCCGCCTGCAAGTTGACCACAACACCCTC TCACCCCCCCTCCCCCTTCCTGCCCCCCTTGGTCCCCCTGCGACGCGCAG ACGCCCCCGCCTTCCAGGTCCTCGCGGCGCTCCTCGACGCGCGCGCGCAC GACGCCATTCACCCCACCGCGCACACGCTCACGGCGACGTACGGCGACGC CGGCGTCTTTGCTCTCGCCGCCGCGGACGCCGCGGACGCCAGCGCCGCGC TCGCGGCGTCGCTCGCGCGCGCCGTCGCCGCCGCCGCCAAGGCCGCGCCG CCGGCGACGGAGCTCGCCGCGGCCGTCGCGCTCGCGCGCGTGCGCGCGCT GGCGGCGGCGGCGGCGCCCGCGGGCGCGGCGGCGGCGCTCGCGGCGCGCG CCACGTCAGGTGCGTGCGCGCGCGTGCCTCTTCCTCGCTTGTTTTTGGGT CGGTCGTGGTTGCGCGTTGGTGTCGGTGTGTCGGATGTTGGCGAGTGCTT TGCTGGGCTTTGCTGTTTGCGCCCGTGCTGCTGTGCGCGTGCGGCGCCAG GCCGCGTCGCCGCCGCCGCGCTTGCATCAACTCACTCACCGTCCGCGGCA CCCATGATGTGTGGCATTGTGGCACGTCACGTCACGTGCTCCGTTCTGCC CACTGCCCCCCTCCCCCTGGCTCACGAGCACCATTCGCCGCCGCCACGCC ATGCGCTCTCCTTGCTAATTTGCGGCAGGCGCGGCAGCGGGCGTCGACGG CGTCACCGGCGAGGCCGTGCGCGCCGCCGCCGCCAAGCTGGCCAAGGGCC CCATGGCGCTGGCCGCCGTCGGAGACATGCGCGCGGTGCCGCGGTTGGAC ACGATCAAGGGCTTGCTCTAGCCGCCGCCGCCGATGATGACGGGCGACGG TGCGCTCTGGGGCTGCGGAGCTAGTGTGCGGGGGGCTTCTTGCGGAGACT TTACGTATGGGGTGGT
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Coding sequence (CDS) from alignment at Contig_131:81091..90656-

>mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1716bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )
ATGAAGCTGGGCAGGATCGGCGGGTGGCTTCTGAATGACGCGCTGGCGGG
CTGGCGGCAGGGGGCTGATGCGGCAAGGTGCGTTGACTTGGAGTACGAGG
GCGTGCATCATAGCGCTGCACACGAGCTGCGCGGCGCGGGAAGAGTGGCG
ATGCTGAGCAGACTAGCCTCGCAGCAGTGCAAGGCGGTGGCCGCGGCGCC
GGCGGCGCAGCAGGCTGGCAGGCGCGCCCTGAGCGCTCTCCTGTCCCTGG
AGCAGGAGTTCCCAGGGTCACCTGAGGCGAGCCCCTCAGCCCTGCCCACG
CCTGTGAGCAAGGTCTCCACTCTGCCCAATGGCGTCAAGGTGGCGTCTCT
GGAGACTGGCGACAAGGCCGCCAGCTTCAGCCTCGTTGTGAACGCGGGGT
CGCGCGACGAGACGCTGCCGCAGACGGGCGCGACGCTGCTGCTGTCGCGC
CTCGCGTACAAGTCCACGGCGGAGCGCTCGTCTCTGCGGCTTAACAGGGA
TCTGCAGGACGCCGGCGTGATTTACGGCTGCGTTGGCGGGCGCGAGAAGA
CGATCTACACGGCGCAGTGCCTGCCCGACGCGGCGCCGGCGGCGCTGTCC
GCGATCGCGGAGACGGTGCTCTCGCCACGCATGTCCCCGTGGGAAGTGAG
CGACATCAAGCGCCGCGGTGACAACGCTCAGCCACGCACAGCCCCCGCGG
TGAACCCCCGCAGCGACGCACGCCTCTCGCAGGCAGTCGCTTGGAGCAAG
ATGGTCGCGAAGATCGACCTCGTGGAGCACGCGGCAAGCCCCGCGGCGAT
GCTCCTGGAGGCAGTGCACGCCGCCGCGTTCGACCCCGCGTCGCCGCTGG
GCCACCCCTTCTTTGCGCCGTGCGAGCTGGACGCGCCCGCGGTGGCAGCG
CTCGCCGCGGCGCGCAGCGCGCCCGCGTCACTGACGCTCGCAGCGCTCGC
CGCGGCGCGCACCGCTCCCGCGTCGCTGACGCTTGCAGAGGGCGCGCTCG
ACTTCAGCCACAGCGGTGTGCCCATGTGGCCGAGGGCGGCGAAGGCAGCC
AGCCGCCCGTGCGTGGGCATCTCGCACGAGGACCTCCTTGAGGCCGCGAC
GGAGCTCTTTGGCGGCGGCGCGGCGACCGCCGGCGCCGGCGCCGCCAACG
CCGCGCCCGCGCGCGCGTCCAAGTTTGTCGGCGGCGAGCACCGCGTGCAC
ACCAAGAGCGGCGCCGTGACGCACGTCGCGCTCGCGTTCGCCGGCCCCGC
CGCCGGCGACAAGGACGCCCCCGCCTTCCAGGTCCTCGCGGCGCTCCTCG
ACGCGCGCGCGCACGACGCCATTCACCCCACCGCGCACACGCTCACGGCG
ACGTACGGCGACGCCGGCGTCTTTGCTCTCGCCGCCGCGGACGCCGCGGA
CGCCAGCGCCGCGCTCGCGGCGTCGCTCGCGCGCGCCGTCGCCGCCGCCG
CCAAGGCCGCGCCGCCGGCGACGGAGCTCGCCGCGGCCGTCGCGCTCGCG
CGCGTGCGCGCGCTGGCGGCGGCGGCGGCGCCCGCGGGCGCGGCGGCGGC
GCTCGCGGCGCGCGCCACGTCAGGCGCGGCAGCGGGCGTCGACGGCGTCA
CCGGCGAGGCCGTGCGCGCCGCCGCCGCCAAGCTGGCCAAGGGCCCCATG
GCGCTGGCCGCCGTCGGAGACATGCGCGCGGTGCCGCGGTTGGACACGAT
CAAGGGCTTGCTCTAG
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