mRNA_13605 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A835ZJK1_9STRA (Peptidase_M16 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK1_9STRA) HSP 1 Score: 867 bits (2241), Expect = 7.430e-313 Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 2
Query: 23 MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL 1735
MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL
Sbjct: 1 MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAMLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGVFALAAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRAAAAKLAKGPMALAAVGDMRAVPRLDTIKGLL 571
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: D8LCU2_ECTSI (Mitochondrial Processing Peptidase alpha subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCU2_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.480e-40 Identity = 144/416 (34.62%), Postives = 210/416 (50.48%), Query Frame = 2
Query: 173 MLSRLASQQCKAVAAAPAAQQAGRRALSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNR--DLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGIS--HEDL---LEAATELFGGGAATAGAGAANAAPARAS--KFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDARAHDAIHPTAHTLTATYGDAGV 1393
M+ ++ A AAP + +S+L+ L++E+ GSP P+A PV+KVSTL NG KV + E+G A+ +VV +GSRDE+ Q+GA+L L +AYK T RSS+RL R D+++ G GREK +Y ++C PD+A LSA+AE+V+SP++ PWE+SD + A+LS+ + L H S A + +A+HAAAF A LG P P +++L+ A+G +F + KA +G++ HED EAA E A ++APA S K+VGGE RV + G+ T V++AFA P+ D APA++VL ALL ARA A P+A + +Y DAG+
Sbjct: 1 MIRAVSGPVVAAARAAPLRAVVASKGMSSLVPLDEEYMGSPSTMPAAASAPVTKVSTLSNGAKVITRESGQLGATVGVVVGSGSRDESASQSGASLHLEGMAYKLTEARSSIRLMRQADVENVGGNLAASRGREKMVYVSECPPDSAGTVLSALAESVVSPKIVPWEISD-------------------ASAKLSEII----------LQRHGESTAEQVDDALHAAAFGDAFSLGKPL-------TPGLSSLS--------------------------ADGLKEFRGARY-------KAPGITVIGVNVPHEDFKSQAEAALEA-----------ADSSAPAARSPAKYVGGELRVKSDVGS-TSVSMAFAAPSGSDASAPAYEVLGALLGARAAAAA-PSASGFSVSYTDAGL 334
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S3PID5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PID5_9STRA) HSP 1 Score: 109 bits (272), Expect = 8.030e-23 Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 2
Query: 266 SLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
SL+ E PG P SP SA P P +K++TL NG++VAS ET + ++ + ++AGSR E +G + LL +A+KST RS LRL RD++D G G RE +YT +CL D + +A+++L P + PW++ D + V +L + A+L E +H+AA+ ++PLG P + P
Sbjct: 34 SLDMELPGIPPLSPASAQPKPETKITTLANGLRVASEETYGQVSTIGMFIDAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQRE------------------------------VIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCP 213
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S3UY37_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UY37_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.200e-21 Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 2
Query: 266 SLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
SL+ E PG P SP SA P P +K++TL NG++VAS ET + ++ + ++AGSR E +G + LL +A+KST RS LRL RD++D G G RE +YT +CL D + +A+++L P + PW++ D + V +L + A+L E +H+AA+ ++PLG P + P
Sbjct: 34 SLDMELPGIPPLSPASAQPKPETKITTLANGLRVASEETYGQVSTIGMFIDAGSRYENDSNSGVSHLLEHMAFKSTENRSHLRLVRDIEDVGGTVGAASSRECIMYTGECLRDNVETIVDVMADSILRPALKPWDIEDQRE------------------------------VIGYELQAMEQNAQALLTELLHSAAYGESTPLGQPLWCP 213
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A4D9D8T2_9STRA (Peptidase_M16 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8T2_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.970e-21 Identity = 114/353 (32.29%), Postives = 158/353 (44.76%), Query Frame = 2
Query: 260 LLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF-APCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPARASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAA 1315
L+ L++E+P P +PS + STL NGVKV S G K S L V AGS E + G+ LLL LA+K T++RS+LRL RDL+ G + GRE +Y LP+ A +AL A ET LSP+++P+ VS+++ TA A D+ AA L EA++ AA+ +PLGHP + +L A ++A A S+T+ G++H L AT L G A G++ AAPA S ++GGE R+ S + T V LAF P KDA +VLAA
Sbjct: 36 LVDLDEEYPDLPALNPSGASPFNVETSTLSNGVKVVSTLAG-KTTSVGLSVAAGSLFEVPGEEGSALLLQHLAFKGTSKRSALRLLRDLESVGAAPSALAGRESLLYKVTALPEYAESALEAAFETALSPKITPYLVSELQ---------TAAAA---------------------DMETFAADARLQLGEALYEAAYGENTPLGHPLYHLGSQLTAGSLATYRAKTYGANSITVFG---------------------------------------TGVAHAQLASWATRLADGLAP----GSSKAAPA--SPYIGGEARLKATSDS-TFVGLAFCAP--DGKDAGVLEVLAA 309
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A2R5GCH9_9STRA (Mitochondrial-processing peptidase subunit alpha n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCH9_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.520e-21 Identity = 71/217 (32.72%), Postives = 114/217 (52.53%), Query Frame = 2
Query: 245 RALSALLSLEQEFPGSPEASPSALPT-PVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
R L++ SL+ EFPG PE +P++ T P +KV+TLPNG++VAS ET + + + V+AGSR ET G + L+ +A+KST RS LRL RD++D G RE I+ +CL D A+ +++T++ P+++PW++ + ++ V DL A+ ++L E +H AA+ +PLG + P
Sbjct: 20 RGLASQPSLDVEFPGMPELTPASNKTKPETKVTTLPNGLRVASEETFGQVTALGMFVDAGSRYETDANNGVSHLMEHMAFKSTENRSHLRLVRDIEDIGGQMAAASAREFMIFQGECLRDYVENAVDILSDTIVRPKLAPWDIDEQRK------------------------------VIGYDLENMEANAQSVLTELLHEAAYGSETPLGRSLWCP 206
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S2WSD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD0_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.150e-20 Identity = 74/212 (34.91%), Postives = 111/212 (52.36%), Query Frame = 2
Query: 251 LSALLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF 886
L A ++ +F + EA+P+A + + +TL NGVKV S ETG AA+F + V+AGSR E+ GA+LLL +A+K T RS L L R L+ G+ V GRE Y+A LP + A ++ +AET LSP + W+V + K +++VA+ +L + P +L EA+H AAF +P+G F+
Sbjct: 17 LCARVAAAAKFSTAAEAAPAASLSVAT--TTLSNGVKVVSKETGAPAATFGVAVSAGSRHESAMDGGASLLLKHMAFKGTTSRSDLALARSLEAEGLSANAVAGRELVYYSASGLPSSLEAGMAGVAETALSPALLDWQVKETK----------------------AESVAF-------ELATQSTDPQTLLTEALHEAAFGDETPMGRTFY 197
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7S2SMW1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SMW1_9STRA) HSP 1 Score: 103 bits (258), Expect = 6.700e-20 Identity = 72/218 (33.03%), Postives = 112/218 (51.38%), Query Frame = 2
Query: 242 RRALSALLSLEQEFPGSPEASP-SALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAP 892
+RA ++ SL+ FPG PE +P S P +++TLPNG++VAS ET + ++ + V++GSR E+ +G + +L +A+KS+ ERS LR RD++D G G RE IY A+ L D A+ +A+TV +P M PW+V ++ V +L + ++P A+L E AA+ SPLG P + P
Sbjct: 21 KRAFASQPSLDTRFPGIPELTPASEHEKPTMQMTTLPNGLRVASQETYGQVSALGVFVDSGSRYESDHNSGISHMLEHMAFKSSKERSHLRTVRDIEDIGGSIGAASSREYMIYQAETLRDHLETAIDIVADTVCNPAMEPWDVDACRK------------------------------VISYELDDMNSNPQAVLTELFQEAAYGQQSPLGRPLWCP 208
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: W7U357_9STRA (Mitochondrial-processing peptidase alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U357_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.020e-18 Identity = 76/209 (36.36%), Postives = 106/209 (50.72%), Query Frame = 2
Query: 260 LLSLEQEFPGSPEASPSALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFF 886
L+ L++E+P P +PS + STL NGVKV S G K S L V AGS E + G+ LLL LA+K T++RS+LRL RDL+ G + GRE +Y LP+ A +AL A ET LSP+++P+ VS+++ TA A D+ AA L EA++ AA+ +PLGHP +
Sbjct: 37 LVDLDEEYPDLPALNPSVASPFNVETSTLSNGVKVVSTLAG-KTTSVGLSVAAGSLFEVPGEEGSALLLQHLAFKGTSKRSALRLLRDLESVGAAPSALAGRESLLYKVTALPEYAESALEAAFETALSPKITPYLVSELQ---------TAAAA---------------------DMETFAADARLQLGEALYEAAYGENTPLGHPLY 214
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A812L713_9DINO (Uqcrc2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L713_9DINO) HSP 1 Score: 97.4 bits (241), Expect = 1.000e-17 Identity = 133/444 (29.95%), Postives = 180/444 (40.54%), Query Frame = 2
Query: 188 ASQQCKAVAAAPAAQQAGRRA-LSALL-------SLEQEFPGSPEASPS-ALPTPVSKVSTLPNGVKVASLETGDKAASFSLVVNAGSRDETLPQTGATLLLSRLAYKSTAERSSLRLNRDLQDAGVIYGCVGGREKTIYTAQCLPDAAPAALSAIAETVLSPRMSPWEVSDIKRRGDNAQPRTAPAVNPRSDARLSQAVAWSKMVAKIDLVEHAASPAAMLLEAVHAAAFDPASPLGHPFFAPCELDAPAVAALAAARSAPASLTLXXXXXXXXXXXXXXXAEGALDFSHSGVPMWPRAAKAASRPCVGISHEDLLEAATELFGGGAATAGAGAANAAPAR--ASKFVGGEHRVHTKSGAVTHVALAFAGPAAGDKDAPAFQVLAALLDA----------------------RAHDAIHPTAHTLTA---TYGDAGVFALAAA 1411
A + ++ A APAA AG+ + + ++L SL++ FPG P S A PT V +VS LPNG+ V S ++ A++ + + GSR ET+P G +LA+KST +RS+L+L RD+ G V GRE YTA D A+AET+ +P++ WE L + AW+ L A+P A + +AVHAAAF ASPLG APA A A A L+ +G K A V + H L+EA L G APA+ A K GGE T +G VT V L FA K A QVL A L +A D P+ T+++ TY DA +F L A
Sbjct: 14 AGARAQSTAVAPAAGAAGQASFMESMLFDAPRQNSLDETFPGVPAISGELAAPTKV-QVSKLPNGLTVVSQDSHRGASTVGVYLKGGSRTETVP--GTAFAAQQLAFKSTQKRSALKLFRDVDVVGGALSAVAGRETLAYTASGTRDCLSLLTEAVAETLTAPKLDAWE--------------------------LDENAAWTAA----QLAAAQAAPGAAIAQAVHAAAFGEASPLGK---------APATAGQAGVEDVKAYLSAH--------------VQG----------------KNAVLAGVNVDHAQLVEAGDLLL--------LGVPEGAPAKFEAVKPRGGEFITRTDAG-VTEVGLGFAVTGLDAKATLALQVLQAALGTAPPPGLTRGSAKTQISDLLAKIKAGDTALPSGSTVSSGVYTYSDAALFTLTGA 376
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA) HSP 1 Score: 810 bits (2093), Expect = 2.910e-294 Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 1
Query: 1 MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ 1416
MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ
Sbjct: 1 MGGRASKVLEEGVVNGGNSGEEHAELQPQRQRTRKQHEVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQVNTAMETGVPVPAPRAADPRSVRAAALTGRRRAGLARAKAVPPRPSPTKGGAAXXXXXXXAAAKWGVRVKRGRGGGVTVRAPKADAEEPVREARKRKKANKVLAWKLRAKARDARQRRRAPAAAAPAAARPGVRRAAAXXXXXXXXXXXXXXXXXXXXXXXXAGAGVKRGGSRSKAQSGAGCRQ 472
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI) HSP 1 Score: 231 bits (589), Expect = 1.020e-66 Identity = 128/275 (46.55%), Postives = 174/275 (63.27%), Query Frame = 1
Query: 115 VMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVD---------GKELSTHIA----------PARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRG-----EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQV 867
VMRL++RIARSG +SRREAER+++ G V ++NGA +PA+NV D V+V+ G + T + ++W VHK R ELV R D +GR V +R+ + L D L PVGRLD+ TEGLLLLT+DGDLARK+E P+ + R Y VRV+G++T EKLR M+ GC I+GV YKGM V ++ G E N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ +GGVA V + + F++++
Sbjct: 112 VMRLSRRIARSGIASRREAERMVEAGVV--------------MVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGKVLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDTLMPVGRLDYNTEGLLLLTNDGDLARKMELPSSNIVRTYSVRVYGNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRL 372
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A7C5SFA6_9PROT (Pseudouridine synthase n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SFA6_9PROT) HSP 1 Score: 206 bits (524), Expect = 5.120e-60 Identity = 119/239 (49.79%), Postives = 150/239 (62.76%), Query Frame = 1
Query: 121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
RLA+RIAR+G SRR AE LI+EGRV ++NG +PAVNV+ D V VDG L + AP R+W HK G +V+ DEKGR V ER+ G + VGRLD +EGLLLLT+DG LAR+LE P G R YRVR FG VT + L ++ G I+GVHY +V +D E N W+ EGKN +IRR+C+HL L VNRLIRTA+GPF+LG++ G +AEV
Sbjct: 7 RLARRIARAGVCSRRAAEELIREGRV--------------MVNGETVTTPAVNVTADDVVVVDGAPLPSP-APVRLWRYHKPCGLIVSERDEKGRPTVFERLP--GDLGRVISVGRLDLNSEGLLLLTNDGALARRLELPATGWTRRYRVRAFGCVTQDALAALRDGLTIDGVHYGKIVAKLDTAEGANVWMTFALKEGKNREIRRICEHLGLKVNRLIRTAYGPFQLGRLKRGALAEV 228
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: W4FXM7_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXM7_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.640e-57 Identity = 115/241 (47.72%), Postives = 149/241 (61.83%), Query Frame = 1
Query: 118 MRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHN-TWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
MRLAKR+A +G SSRREAE++I EGRV ++NGA AVNV+ D V VD K L+ + RVW HK GELV SD +GR +L+R+KA+G+ L VGRLDF TEGLL+LT+DGD AR LEHP ++R YRV V+G V KL ++RG +++GV Y+ M V I+ K TWL V EGKN +IR H+ L + RLIR +GP++L + G V EV
Sbjct: 72 MRLAKRLAMAGVSSRREAEKIILEGRV--------------VVNGAKVNQVAVNVTFDDVVTVDHKTLAARPSKRRVWIAHKLAGELVTSSDPRGRPTILQRIKAMGVESHLMAVGRLDFNTEGLLVLTNDGDYARYLEHPKHAVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMAVKIESTTKDKETWLQVKLTEGKNREIRNAMAHVRLVLKRLIRVEYGPYRLADLNKGNVLEV 298
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A537NY95_9PROT (Pseudouridine synthase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NY95_9PROT) HSP 1 Score: 199 bits (507), Expect = 3.610e-57 Identity = 115/253 (45.45%), Postives = 155/253 (61.26%), Query Frame = 1
Query: 121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP---LHEQFLKQVN 870
R+AK IAR+G SRR+AERLI EGRVK +NG V +SPA+NV D +R+DG+ L +R+W HK G + + D +GRR V + ++ + +GRLD TEGLLLLT+DG+LAR LE P G R YRVR +G L ++ G IEGVHY + ID+ + N WL + EGKN +++++C+HL L VNRLIRTAFGPF+LG + GG+AEVP L EQ ++V+
Sbjct: 22 RIAKAIARAGLCSRRDAERLIGEGRVK--------------LNGKVLVSPAMNVKPGDDIRIDGQPLPQK-EESRLWRYHKPAGLVTSHKDPEGRRTVFDALREQ--LPRVISIGRLDINTEGLLLLTNDGELARLLELPATGWVRRYRVRAYGHPDPAALEKLKGGITIEGVHYGPIEAKIDKAQGDNAWLNIAIREGKNREVKKICEHLGLQVNRLIRTAFGPFQLGDLERGGIAEVPAKVLAEQLGRKVS 257
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A2W2BBS9_9HYPH (Pseudouridine synthase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BBS9_9HYPH) HSP 1 Score: 197 bits (502), Expect = 1.220e-56 Identity = 116/259 (44.79%), Postives = 159/259 (61.39%), Query Frame = 1
Query: 121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP-------LHEQFLKQVNTA 876
R+AK IAR+G SRR+AERLI EGRVK +NG V S A NV+ D + VDG+ L + A ++W HK G +V+ +D +GR V E+++ + +GRLD TEGLLLLT+DG+LAR LE P G R+YRVR FG V L +++G +EGV Y + I+R + NTWL + EGKN +++R+C+HL L VNRLIRTAFGPF+LG++ GG+ EVP + E+F K+ + A
Sbjct: 8 RIAKVIARAGVCSRRDAERLIGEGRVK--------------MNGKVLTSAATNVTAKDVILVDGQPLPSKEA-TKLWRYHKPGGLVVSNNDPQGRPTVFEKLREQ--LPRVVSIGRLDINTEGLLLLTNDGELARFLELPATGWTRKYRVRAFGHVNEASLTKLEKGVEVEGVRYGPIEAKIERVQGDNTWLTIAIKEGKNREVKRICEHLGLQVNRLIRTAFGPFQLGELPRGGIEEVPTRAMKSSIGEKFFKKEDDA 249
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A6G6WY02_9HYPH (Pseudouridine synthase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WY02_9HYPH) HSP 1 Score: 195 bits (496), Expect = 1.610e-55 Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 1
Query: 121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVP---LHEQFLKQV 867
R+AK IAR+G SRR+AERLI +GRVK +NG V SPA+NV +D VRVDG+ L +R+W HK G + + D +GRR V + ++ + +GRLD TEGLLLLT+DG+LAR LE P G R YRVR +G L + G +EG+HY + +D+ + N WL + EGKN +++++C+HL LTVNRLIR AFGPF+LG + GG++EVP L EQ ++V
Sbjct: 15 RIAKAIARAGLCSRRDAERLIADGRVK--------------LNGKVLSSPAINVKPSDDVRVDGQPLPQK-EESRLWRYHKPAGLVTSHKDPEGRRTVFDALREQ--LPRVISIGRLDINTEGLLLLTNDGELARLLELPATGWVRRYRVRAYGKPDPAALARLAGGVTLEGIHYGPIEATLDKAQGDNAWLNIAIREGKNREVKKICEHLGLTVNRLIRIAFGPFQLGDLERGGISEVPAKVLAEQLGRKV 249
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A521DN63_9RHOB (Pseudouridine synthase n=1 Tax=Thalassobius litoralis TaxID=1010611 RepID=A0A521DN63_9RHOB) HSP 1 Score: 197 bits (502), Expect = 1.710e-55 Identity = 114/239 (47.70%), Postives = 153/239 (64.02%), Query Frame = 1
Query: 121 RLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
R+AK IAR+G++SRREAERLI+EGRV +NG SPA+NV+ D + VDGK L PARVW HK G + DE+GR + +++ GL + VGRLD +EGLLLLT+DG++ RKLE P G R+YRVRV G V+ EKL +++G +GV+Y M+V++DR + N WL V EGKN +IRR + + TVNRLIRT++GPF+LG++ G V EV
Sbjct: 10 RIAKIIARAGRASRREAERLIEEGRVT--------------VNGKQITSPALNVTARDTITVDGKPLEA-AEPARVWLYHKPAGLVTTNRDEQGRATIFDKLPD-GLPRVMS-VGRLDLNSEGLLLLTNDGEVKRKLELPATGWLRKYRVRVNGRVSEEKLEPLRKGITHDGVNYLPMIVSLDRQQGANAWLTVGLREGKNREIRRAMEAIGFTVNRLIRTSYGPFQLGQLKPGEVEEV 231
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A1T4SUE8_9HYPH (Pseudouridine synthase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SUE8_9HYPH) HSP 1 Score: 195 bits (496), Expect = 2.100e-55 Identity = 118/245 (48.16%), Postives = 150/245 (61.22%), Query Frame = 1
Query: 112 EVMRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLH 846
E R+AKR+AR+G SRR+AER I GRVK ++G V +PA V+ A R+ VDGK L T P R+W HK GELV D +GRR + E + G+ + VGRLDFM+EGLLLLT+DG LARKLE P R YR RV G+V E+L + +G IEGV Y + ++DR ++ N WL + EGKN ++RRV HL+L V RLIR AFGPF LG++ G V EVP H
Sbjct: 3 EPERIAKRLARAGLCSRRDAERWIAAGRVK--------------VDGKVLDTPAFVVTDASRIEVDGKPLPTADRP-RLWLYHKPPGELVTARDPQGRRTIFESLPK-GMPRVVT-VGRLDFMSEGLLLLTNDGGLARKLELPANAWTRRYRARVHGAVDEERLAELAKGITIEGVRYGAIRASLDRQQRSNAWLDIALTEGKNREVRRVLGHLDLPVVRLIRVAFGPFHLGQLERGVVEEVPPH 230
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Match: A0A485L9R2_9STRA (Aste57867_18304 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9R2_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.810e-55 Identity = 107/240 (44.58%), Postives = 146/240 (60.83%), Query Frame = 1
Query: 118 MRLAKRIARSGKSSRREAERLIQEGRVKPRRYLYHLQLLLSLINGAVALSPAVNVSTADRVRVDGKELSTHIAPARVWAVHKARGELVARSDEKGRRCVLERVKAVGLSDALKPVGRLDFMTEGLLLLTDDGDLARKLEHPTVGLRREYRVRVFGSVTAEKLRTMQRGCVIEGVHYKGMVVNIDRGEKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEV 837
MRLAKR+A +G SSRR+AE++I EGRV L+NGA + A NV+ D + VD K LS RVW HK GELV D +GR +++R+K +G+ L GRLDF TEGLLLLT+DGD AR+LEHP + R YRV V G V K+ +QRG +++G+ Y+ M V I+ + ++WL + EGKN +IR+ H+ L V RL+R +GP++L + G V EV
Sbjct: 64 MRLAKRLAMAGVSSRRDAEKIILEGRV--------------LVNGAPTTNVATNVTMRDLISVDEKPLSARPTKRRVWMAHKLAGELVTTHDPQGRPTIMDRIKRMGIQSHLM-AGRLDFNTEGLLLLTNDGDYARQLEHPKYEVTRVYRVLVRGQVLPSKIEELQRGALVDGIKYRPMQVKIESTKDKDSWLQIKLTEGKNREIRKAMAHVRLIVKRLVRVEYGPYRLADLTKGHVLEV 288 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to top
BLAST of jgi.p|Trimin1|352770 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1833bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAAACATTCAGTACAGGGCATCATGAAGCTGGGCAGGATCGGCGGGTGGCback to top protein sequence of jgi.p|Trimin1|352770 >Trimin1|352770|estExt_Genemark1.C_Ctg_1310011 ID=Trimin1|352770|estExt_Genemark1.C_Ctg_1310011|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=572bp MKLGRIGGWLLNDALAGWRQGADAARCVDLEYEGVHHSAAHELRGAGRVAback to top mRNA from alignment at Contig_131:81091..90656- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9566bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_131:81091..90656- >mRNA_13605 ID=mRNA_13605|Name=jgi.p|Trimin1|352770|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1716bp|location=Sequence derived from alignment at Contig_131:81091..90656- (Tribonema minus UTEX_B_3156 )back to top |