mRNA_13462 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350798
Unique Name	mRNA_13462
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350798 vs. uniprot
Match: A0A835YNR0_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR0_9STRA)

HSP 1 Score: 914 bits (2363), Expect = 0.000e+0
Identity = 786/786 (100.00%), Postives = 786/786 (100.00%), Query Frame = 2

Query:   62 MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK 2419
            MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK
Sbjct:    1 MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGGDDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLLKEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDFTKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNLAQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFALGLLASAGVAAAGLNSAAANAGAASYKGSYGGSSXXXXXXXXXAAVAEKASAAPGGKXXXXXXXXXXXXXXXXXXXXXXATVAELATLRKELDSAVKTIKELRTDILALQGHNDQLAAELRELRRRPDPAAVAAAXXXXXXXXXKDAQEREARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAAADAVAEATAASKQARESKTXXXXXXXXXXPKRPXXXXXXXXXXTAPAPQSSDPVKAAMDDVESKLAGKAEAEAEKLSAXXXXAARAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQQSQEPKAEITXXXXXXXXXXXXXXXXXXXEEPAAPAKXXXAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKQALGLPDGWVPSEKALDLMSVAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK 786

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350798 vs. uniprot

BLAST of jgi.p|Trimin1|350798 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YNR0_9STRA	0.000e+0	100.00	SAP domain-containing protein n=1 Tax=Tribonema mi...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_72	contig	Contig_72:530758..537257 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350798\|estExt_Genemark1.C_Ctg_720052
Hectar predicted targeting category	chloroplast
TranscriptId	351120
Track	FilteredModels1
ProteinId	350798

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350798	gene_13462	Tribonema minus UTEX_B_3156	gene	Contig_72 530758..537257 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350798	Trimin1\|350798\|estExt_Genemark1.C_Ctg_720052	Tribonema minus UTEX_B_3156	polypeptide	Contig_72 530819..536685 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13462_1	exon_13462_1	Tribonema minus UTEX_B_3156	exon	Contig_72 530758..531235 +
exon_13462_2	exon_13462_2	Tribonema minus UTEX_B_3156	exon	Contig_72 531981..532114 +
exon_13462_3	exon_13462_3	Tribonema minus UTEX_B_3156	exon	Contig_72 532711..533130 +
exon_13462_4	exon_13462_4	Tribonema minus UTEX_B_3156	exon	Contig_72 534239..534371 +
exon_13462_5	exon_13462_5	Tribonema minus UTEX_B_3156	exon	Contig_72 534763..534903 +
exon_13462_6	exon_13462_6	Tribonema minus UTEX_B_3156	exon	Contig_72 535570..537257 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_13462	UTR5_13462	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_72 530758..530818 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13462	CDS_13462	Tribonema minus UTEX_B_3156	CDS	Contig_72 530819..531235 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13462	UTR3_13462	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_72 536686..537257 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_72:530758..537257+
coding sequence from alignment at Contig_72:530758..537257+

spliced messenger RNA

>mRNA_13462 ID=mRNA_13462|Name=jgi.p|Trimin1|350798|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2994bp|location=Sequence derived from alignment at Contig_72:530758..537257+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCAGTGCTGAGGCAAGAGGGGCACAAGTGAAGCGCAGCAGCAGTGCCA
ACTGCGCAGACATGCCCAGCAAAGCGGTGCCAGTTGCCGTGGTGGCGTTT
GCGCTGTGCCTGGGGACACACGCCTTCCTCTCTCCACAGTCATGCACTGC
ACAGCGGCGAGCGAGCGCTGCGCCTCAGCTGTCCATGAGCAGTGGCAGCG
GCAACGGCGGCGATGACATGGCAAAGCTCAGGAGAGATCTGGCCGTCTCC
GTTGCGGCCGCCTCCCTCTTCGTGCTTCCTGCAATTGCCACGGCAAACGA
GTTCCCATCTGGCGCGGGATCCTCCTTTGCCCAGGAGCAGAAGCTGCTGC
AAAAGCTGCTTAAGGAGGACACAGAGGTGAAAGCGGAGACTGTGCCGGAC
GTGCCTGCGGCACCGCAGGTGGAGGTGCCGCCGTGGATGGCGTTGCCCGA
GGTGCAGCCTGTTGGCGGCGGGCTCAAGCTGCGGGAGCCGGTCTTCCAGA
AGTTTGACTTTACAAAGGCGCTGGAGGGCATGGACTTCAAGTTGGGTGCG
CCTGACTACGGCAAATACAAGTTCAACATCAACGCCGCTGCGCCCACGCG
CTGGGAGGACAGGCCCCCGGTGAACGTACCGCCGCAGCTGCAGAGCGTGC
TCACGAACCTCGCGCAGAAGCGCGCGGAGCTGCAGGCGGCGTGGGAGCGC
GCGCCGCCGCTGCCCGCGGACGCCGCGGCAGCGCTCCAAGCCCTAGATGA
CGCCGCCACCAAGGCGCTGAAGCCCTACCTCAAGGACGACGTGCCGCCGG
GGTTCGCGCTCGGCCTGCTGGCGAGCGCCGGCGTCGCGGCTGCTGGGCTC
AACAGCGCCGCGGCGAATGCGGGCGCGGCCAGCTACAAGGGGAGCTATGG
CGGCAGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGCAGCGGTGGCGG
AGAAGGCATCCGCAGCGCCGGGGGGCAAGGGGAAGGAGGAGGAGGAGGGG
GAGGGGGATGCGGAGGTGCCTGTGAGCGCCAGCAGCGGCGCTGGCGCCAC
CGTGGCGGAGCTGGCTACGCTCCGCAAGGAGCTTGACAGCGCTGTCAAGA
CCATCAAAGAGCTGCGCACGGATATACTGGCGCTGCAGGGCCACAACGAC
CAGCTTGCTGCAGAGCTGCGAGAGTTGCGGCGGCGGCCGGACCCAGCGGC
GGTGGCGGCGGCCGCGGAGGCAGCGGCGGCGCAGCAGGAGAAGGACGCAC
AGGAGCGGGAGGCGCGCGCGAAGGTCGCAAAGGAGCAGGAGGTCCTCGCA
GCAAAGATGGCGGAGGCGCGCGCCGCGCTGTCCCAGGGGTTCCCCTCCAT
GAAGGAGGTCACAAAGGCCAAGACGGTCTACGCAGACGAGACGCAGGAGG
TGCGCGCTGCCGCAGACGCCGTCGCAGAGGCGACCGCCGCGTCCAAGCAG
GCGCGCGAAAGCAAGACGAGCGCAGCCGCCGCTGCCGCCGCCGCCGCGCC
CAAGAGACCCGCCGCTGCCGCCAAAAAGGCGGCGGCGGCCACGGCGCCCG
CACCGCAGAGCTCTGACCCCGTCAAGGCCGCGATGGATGACGTGGAGTCG
AAGCTGGCGGGCAAAGCGGAGGCCGAGGCGGAGAAGTTGAGCGCTGATGC
GGAGAAGGCGGCGCGCGCGGTCGCTGCCAAGGCGCCCGCGAAGCCGCGCG
CCAAGAAGGCCGCCGCCGCCGCAGCGCCCGCTGCCAAGGCCGCGCCGGCG
CAGGCAGCGGCAGCGGCGGCGCCAGCGGCGGCGGCAGCGGCGCCGGCGGC
AGCGGCGGCGGTCGCTCAGCAGTCGCAGGAGCCCAAGGCCGAGATCACTG
CTGCTGCAGAGCCCGCAGCGGCGCCGGCGGTGGCACAGCAGGCGGAGGTG
CGCAAGGAAGAGCCAGCGGCGCCTGCGAAGCCTGCAGCGGCGGCCAAGCC
GGCGGCGGCGGCTAAACCTGCGGCAGCCAAGCCCGCCGCTGCGGCGAAGC
CCGCGGCAGCCGCCAAGCCGGCAGCTGCGGCGAAGCCAGCACCTGCCAAA
CGAGCGGCTGCCAAGTCGGCAGCTGCCAAGCCAGCTGCTGCCAAACGAGC
TGCTGCCAAGCCAGCTGCCAGCGCCAAGCGGAGCGCTGCCGCTAAGCCTG
CGGAAGCGGCGGACGCGGCGGCGGCGGCGCAGCCTGCAGCTGCCGCCAAG
CCCGCCGCAGCTGCAAAGCCCGCCGCTGCTTCGCCGGCCGCAGCACGCAA
ACAGGCCTTAGGGCTGCCTGACGGGTGGGTCCCTTCGGAGAAAGCCTTAG
ACCTCATGTCGGTGGCACAGCTGAAGGGGTTCCTGAAGGAAGAGGGGTTG
CCGCAGACGGGTAAAAAGGATGATCTCAAAGCCACGATCATGGAATACTT
TGCCAAGAACGCCAACAAATGAGGCAGCAGAGGCGGCGGAGGCTGTGTGT
AAGCGCTGCAGGCTGCGCTCGCCACTGCAGCAGCCACGCCACAGCACTCT
CACGAGGCGACTGCTGCCGAGTCAACACATCAGCTTGCATCCCAATCAGT
GTTTAGAACAAAGGGAGGGGGACTGCAGGATGCGGGCTGCTGCAGCGGCA
GCAGCGTGCGTCTTTGTGTGTGTGCCCATTTGCTACAGACGCTGCGGCGG
CGGTGGTGAGGTGCGGCAGCGGCGGCGGCAGCGGCGGCGGCTCTGTCGAA
CAGCAACGCAGCGGCAGCGCTGGCAGCCACGTCAATGACTCAGCCTCACT
TTGCGAGCAACACAGCAGCCCTCATCAGGGTTTGGCGGAATGCCGCCGAT
GCTTGTATTGCACTGGCAGCGATTGCCGCAGACCTCTTCGCTGCAGGTGC
TGCCGTCGCCGCTGCTGCGGATTTGGTGACCCATTTCGTTTGGTTCTTGC
AAGGCCGGCATTACAGCACTAGCATCCCGTGGGGCACACACATATGTAAT
GGTTTACTGTGTGGCGTATTGCGGTGATGCGCATGGGGGATTTC

protein sequence of jgi.p|Trimin1|350798

>Trimin1|350798|estExt_Genemark1.C_Ctg_720052 ID=Trimin1|350798|estExt_Genemark1.C_Ctg_720052|Name=jgi.p|Trimin1|350798|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=787bp
MPSKAVPVAVVAFALCLGTHAFLSPQSCTAQRRASAAPQLSMSSGSGNGG
DDMAKLRRDLAVSVAAASLFVLPAIATANEFPSGAGSSFAQEQKLLQKLL
KEDTEVKAETVPDVPAAPQVEVPPWMALPEVQPVGGGLKLREPVFQKFDF
TKALEGMDFKLGAPDYGKYKFNINAAAPTRWEDRPPVNVPPQLQSVLTNL
AQKRAELQAAWERAPPLPADAAAALQALDDAATKALKPYLKDDVPPGFAL
GLLASAGVAAAGLNSAAANAGAASYKGSYGGSSGGGSGGGGGAAVAEKAS
AAPGGKGKEEEEGEGDAEVPVSASSGAGATVAELATLRKELDSAVKTIKE
LRTDILALQGHNDQLAAELRELRRRPDPAAVAAAAEAAAAQQEKDAQERE
ARAKVAKEQEVLAAKMAEARAALSQGFPSMKEVTKAKTVYADETQEVRAA
ADAVAEATAASKQARESKTSAAAAAAAAAPKRPAAAAKKAAAATAPAPQS
SDPVKAAMDDVESKLAGKAEAEAEKLSADAEKAARAVAAKAPAKPRAKKA
AAAAAPAAKAAPAQAAAAAAPAAAAAAPAAAAAVAQQSQEPKAEITAAAE
PAAAPAVAQQAEVRKEEPAAPAKPAAAAKPAAAAKPAAAKPAAAAKPAAA
AKPAAAAKPAPAKRAAAKSAAAKPAAAKRAAAKPAASAKRSAAAKPAEAA
DAAAAAQPAAAAKPAAAAKPAAASPAAARKQALGLPDGWVPSEKALDLMS
VAQLKGFLKEEGLPQTGKKDDLKATIMEYFAKNANK*

mRNA from alignment at Contig_72:530758..537257+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13462 ID=mRNA_13462|Name=jgi.p|Trimin1|350798|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6500bp|location=Sequence derived from alignment at Contig_72:530758..537257+ (Tribonema minus UTEX_B_3156 )
CTGCAGTGCTGAGGCAAGAGGGGCACAAGTGAAGCGCAGCAGCAGTGCCA
ACTGCGCAGACATGCCCAGCAAAGCGGTGCCAGTTGCCGTGGTGGCGTTT
GCGCTGTGCCTGGGGACACACGCCTTCCTCTCTCCACAGTCATGCACTGC
ACAGCGGCGAGCGAGCGCTGCGCCTCAGCTGTCCATGAGCAGTGGCAGCG
GCAACGGCGGCGATGACATGGCAAAGCTCAGGAGAGATCTGGCCGTCTCC
GTTGCGGCCGCCTCCCTCTTCGTGCTTCCTGCAATTGCCACGGCAAACGA
GTTCCCATCTGGCGCGGGATCCTCCTTTGCCCAGGAGCAGAAGCTGCTGC
AAAAGCTGCTTAAGGAGGACACAGAGGTGAAAGCGGAGACTGTGCCGGAC
GTGCCTGCGGCACCGCAGGTGGAGGTGCCGCCGTGGATGGCGTTGCCCGA
GGTGCAGCCTGTTGGCGGCGGGCTCAAGGTGAGCTGAACACGTGCATTTT
GCTTGCGCTGCGTTGTTACTGTCAGTTGCATCGCTATGAATGCCTGTTGC
AACGAGCTCAGCAGTTGCTTGATGAGCAGTGTGATTAACGCTGCACGTGC
TACCTTCATTCGCCTGCCGCGAAGCCTTCGCAGCCGTGTGCACACCTTGG
CATGGCGAATGCCCCTGGTTTCCGCAATGTGTTGCTGCTTGAGGCTATGC
TTGCAACACCTGTCGTCGCAGTGCTGATCTCTACGCCTGTCTGATTTTCA
GATGCAACCATAAATATTGAAGTCGCGCCAAAATAACTGCGAGCGCCTCT
CTTCAGGACATGCTTCCAGAGCCGACTAGCACCGCGCGACCCCGCGCACT
GTTCATGTTTGCGCAAAGATGCTAGAGAACAGGGCTGGTGCCACGCTAGC
ATCACAACTTCATTGTGCTGCTGCATGTTACGCTTGAGCACCAACAACAG
CAGCTGCAGCACTGTTGTTGAGGTTGAGCGCGCGCGCCGACAAGGCGATG
CTCCCTCAGCTTTCAGCTCTGCTTTCAGCCAAATACCACTGCTAACCCTG
CACAGCGGTTGCAAATAGCACCACACAGCAAACAGGGCGTATCGACCGAC
TTCACCTCTGATCCACTACATGCAATGCTTGGATAGCTTACTGTGCACGC
AGCTGCCCTGTCTCCCCTAATCCGCACTTCTGCTGCTGTCGCGGTGTGTA
TTTTCTCAAATGCGGCGGCACAGCTGCGGGAGCCGGTCTTCCAGAAGTTT
GACTTTACAAAGGCGCTGGAGGGCATGGACTTCAAGTTGGGTGCGCCTGA
CTACGGCAAATACAAGTTCAACATCAACGCCGCTGCGCCCACGCGCTGGG
AGGACAGGTGCAGCAATCACGGACAGCACAGCCATGCGTTTGGCTTTCAT
GTTGTCATGCCCACGAAAGACAGAATCGATAAGTCTAATTTATTCCACGC
GGTATATCATTGTGTGAGTTGCTTGCGCAGATGCTTATGGCCAGGGCCAT
TTTTAGTTGACATATAGTATAGCAAGTGTCCGGCATGTGCACTGCTGCCA
TATTATCCAGGTGTGCCAGCCCAACAGACGCAGCCTCAGAGCAGCGCATG
TATTGATGTGGATTCATGTCACATTTGCCTCGTCCACCGCTCTGGCTGTG
CAGACTGAGCGCGTAGCCCTCCTGCCCAAGCCGCACAGCGTGACCGCAAA
TTACCAGAGGCAGGCGCGCAAGCACGCACTCTCATGAGCGAGAGAGACAA
GCGCACCAATTCTCTTTGGCTCTGACTCTGCTGCCTACTCACCACAAGGA
CAGCACGCAGACGGGAACGTCCGCAGGTGCAGAAGATGCCGGCGATCTTC
CTGGCCAAGCATGAGGCTGCCATGATCTGATCGTACGGAACCGAAACGCG
TCACATGACCACCGAACCCGCCTTCTGCCGCGCGCACCCGCCACACCTCG
CAGGCCCCCGGTGAACGTACCGCCGCAGCTGCAGAGCGTGCTCACGAACC
TCGCGCAGAAGCGCGCGGAGCTGCAGGCGGCGTGGGAGCGCGCGCCGCCG
CTGCCCGCGGACGCCGCGGCAGCGCTCCAAGCCCTAGATGACGCCGCCAC
CAAGGCGCTGAAGCCCTACCTCAAGGACGACGTGCCGCCGGGGTTCGCGC
TCGGCCTGCTGGCGAGCGCCGGCGTCGCGGCTGCTGGGCTCAACAGCGCC
GCGGCGAATGCGGGCGCGGCCAGCTACAAGGGGAGCTATGGCGGCAGCAG
CGGCGGCGGCAGCGGCGGCGGCGGCGGCGCAGCGGTGGCGGAGAAGGCAT
CCGCAGCGCCGGGGGGCAAGGGGAAGGAGGAGGAGGAGGGGGAGGGGGAT
GCGGAGGTGCCTGTGAGCGCCAGGTATGTGTGAGCAGTGCTCGGCCTTGA
ACAAGGGTTGGGAAGTGAATACGACGTGAAGCCTCAACTAATAGTTTGTG
AGCAGTCTGCCGTGTTGGGCGGCGGATGAGGTGAAGAAGGGAGCAAGGGG
ATATACGCAGAGCATGTGTTATAAAAACTACTTGATTTGTGGCTGGTCAT
CAGTCCTGTTTTCCATGAATTTCAACAGACACTTCAAGTTCAGTTCAACT
ATGTTTTGAGTAGGTTTTTGAGCAGGAATGCTCTCATTGCAGCTGTAAGA
GTCACGCTGGTCTGCACCTTCACTATTGTGACGTGTACAACAACTCATCA
CCAGATGACCGGTGAGTGGTAAACCGCGTGAACTGTAATGTAATCCATTA
TGCTGCTGTGTGTGCACGACGACCCTCTCTGCAAGCACAAGTGTCAATGC
AAGGCATTCCAGTACGGCAGCAGCTTTCTTGCATGCCGCAACTGTCAGTA
CCACGGCCACTAGTGCACAACTGCACTTGAACTTTGGCTCCTGTCATGTA
CACCACTTTCGCGCCCAGGCTCAAAGGCTTCAATAGACAAGCAGATGCAT
GGGGGAAGAAATCACATCAGAGCTACTTTACAGTTGAATCATTCACAAAA
CTCATGGAAGGACAGGAAGCGATCCCGTCATCGCTCAGCTACTTCAAACA
TGAACTTAAACCTTAGCACTTCTACAGCAGTGTTCCCACACACCTCCCCC
CACTCTCAGCACATTTGCGCTCATCTAGGGAATCACATCAGCTGCACTGC
TGTGTCGCTGCATCATGGCAAGCACCCAGCACAGTGGCATTGTTACCTTT
GCAGGTCGTACGACGCTACCATCAGCTAATGGTGTGTGTGCCGCATCAGT
CCACGGTGCAGCAATTGCGTCGGCGTTGGTGCACGTCTTGCGCTCCCATT
ACGTCATCTGCAGTCCACATGCGGAGATTGGTGCAACCTTCTGTCACCTG
CAAGACCAGGAGAACAGGCCAGCAGGCAGAGCCACAGGCTTCCTCATTCA
TGCACTTCAACAAGAAGTTCAACTGTTTGCCTCCTTGGTGCGCATCTCAA
CCATTGTCTATGTTCTGTTGTCTGCCAACAGCAGCGGCGCTGGCGCCACC
GTGGCGGAGCTGGCTACGCTCCGCAAGGAGCTTGACAGCGCTGTCAAGAC
CATCAAAGAGCTGCGCACGGATATACTGGCGCTGCAGGGCCACAACGACC
AGCTTGCTGCAGAGGTATGAGGCGCAGTTGCAATGAAACGTTGAAGTTGT
TGCGTCACCAGCACTGTGTGCAGTACACCCAATCCGGCCAGCGGCTTGGA
ATGTGGTGCTGACGAGGCTGCATCAGTGAGCAGCCGTAAGAGACTCAGGT
TGCCGCAGAGGCGTTGTCACTATAGCAGTGAGTCGCGCAGGGTTTGTTTT
ACCACCGGTGTTGCAGGATGCCTGCATTGCTGCTGCTGTCCGCTTGCTCA
TAAGCTGTCGTAATGAGCGTAGACACGCGCACAGGCTCACAGCACACCTG
CTTGGAGCCACAGCTCTCCCTCTGCACAGGGGAGTCAACGGCCTTGACAC
GCGTGCTTTCTCATTGACACCACCCATCACCTGACTCACGCCCCCCATGC
TGCAGCTGCGAGAGTTGCGGCGGCGGCCGGACCCAGCGGCGGTGGCGGCG
GCCGCGGAGGCAGCGGCGGCGCAGCAGGAGAAGGACGCACAGGAGCGGGA
GGCGCGCGCGAAGGTCGCAAAGGAGCAGGAGGTCCTCGCAGCAAAGGTAG
TAGAAGTATATGTACTTGAAGTACATACCTTCCTTTGTGTAGCGCGAGAG
ATGCTTGCGGCCACGGCAGCGCATGCGCCTATTTACGTTCAGCAGGAGAT
GTCTGCAGCAACGGCACCATACCGGCCTACTGTCGTTTTGCTGAGCACTG
ATGGTTGCGTCATGGGGCGCGGCCACGTGGAGCAATGTGGTGTTGCGCTC
TCCGTGCGTTGAACTTACGGAAGTGCTGCGCGTTTACAGGAAGCACTGGT
AGTGAAACTTAGGTTACAGGTCAGGTTGCTACCAAAGTTTGAACCTTACT
GTCCTACTCTCCACTTGTCTTCCACGCTGCACACACGGGCCCATTGTCAG
CAGACAAACAGCATGTTGCGCCTGACAAGCGCGGAGGAACGGTACAGACC
CTAACCCTAATAACCCTAACCAATCTGACATAGGGGTCAGAAAGTAGCGC
ATAATTTTAAGAACACATCAAAAACAGTAGGTTGATGGTTCTGAAGACAG
ACATGTTTACTTGTTTGTCACATAACTAGGATCTCGAAACACAGGTTTGG
TGCTATCGTCGATGGTGCCTTCGCGTTGCGCTGCAGCGACTCTCACACTT
ATGTTGCACGGGGCATGGTCGATCACTCAACGCCCCCCCCCCGCCCCCGT
GCAATGTCGCAGATGGCGGAGGCGCGCGCCGCGCTGTCCCAGGGGTTCCC
CTCCATGAAGGAGGTCACAAAGGCCAAGACGGTCTACGCAGACGAGACGC
AGGAGGTGCGCGCTGCCGCAGACGCCGTCGCAGAGGCGACCGCCGCGTCC
AAGCAGGCGCGCGAAAGCAAGACGAGCGCAGCCGCCGCTGCCGCCGCCGC
CGCGCCCAAGAGACCCGCCGCTGCCGCCAAAAAGGCGGCGGCGGCCACGG
CGCCCGCACCGCAGAGCTCTGACCCCGTCAAGGCCGCGATGGATGACGTG
GAGTCGAAGCTGGCGGGCAAAGCGGAGGCCGAGGCGGAGAAGTTGAGCGC
TGATGCGGAGAAGGCGGCGCGCGCGGTCGCTGCCAAGGCGCCCGCGAAGC
CGCGCGCCAAGAAGGCCGCCGCCGCCGCAGCGCCCGCTGCCAAGGCCGCG
CCGGCGCAGGCAGCGGCAGCGGCGGCGCCAGCGGCGGCGGCAGCGGCGCC
GGCGGCAGCGGCGGCGGTCGCTCAGCAGTCGCAGGAGCCCAAGGCCGAGA
TCACTGCTGCTGCAGAGCCCGCAGCGGCGCCGGCGGTGGCACAGCAGGCG
GAGGTGCGCAAGGAAGAGCCAGCGGCGCCTGCGAAGCCTGCAGCGGCGGC
CAAGCCGGCGGCGGCGGCTAAACCTGCGGCAGCCAAGCCCGCCGCTGCGG
CGAAGCCCGCGGCAGCCGCCAAGCCGGCAGCTGCGGCGAAGCCAGCACCT
GCCAAACGAGCGGCTGCCAAGTCGGCAGCTGCCAAGCCAGCTGCTGCCAA
ACGAGCTGCTGCCAAGCCAGCTGCCAGCGCCAAGCGGAGCGCTGCCGCTA
AGCCTGCGGAAGCGGCGGACGCGGCGGCGGCGGCGCAGCCTGCAGCTGCC
GCCAAGCCCGCCGCAGCTGCAAAGCCCGCCGCTGCTTCGCCGGCCGCAGC
ACGCAAACAGGCCTTAGGGCTGCCTGACGGGTGGGTCCCTTCGGAGAAAG
CCTTAGACCTCATGTCGGTGGCACAGCTGAAGGGGTTCCTGAAGGAAGAG
GGGTTGCCGCAGACGGGTAAAAAGGATGATCTCAAAGCCACGATCATGGA
ATACTTTGCCAAGAACGCCAACAAATGAGGCAGCAGAGGCGGCGGAGGCT
GTGTGTAAGCGCTGCAGGCTGCGCTCGCCACTGCAGCAGCCACGCCACAG
CACTCTCACGAGGCGACTGCTGCCGAGTCAACACATCAGCTTGCATCCCA
ATCAGTGTTTAGAACAAAGGGAGGGGGACTGCAGGATGCGGGCTGCTGCA
GCGGCAGCAGCGTGCGTCTTTGTGTGTGTGCCCATTTGCTACAGACGCTG
CGGCGGCGGTGGTGAGGTGCGGCAGCGGCGGCGGCAGCGGCGGCGGCTCT
GTCGAACAGCAACGCAGCGGCAGCGCTGGCAGCCACGTCAATGACTCAGC
CTCACTTTGCGAGCAACACAGCAGCCCTCATCAGGGTTTGGCGGAATGCC
GCCGATGCTTGTATTGCACTGGCAGCGATTGCCGCAGACCTCTTCGCTGC
AGGTGCTGCCGTCGCCGCTGCTGCGGATTTGGTGACCCATTTCGTTTGGT
TCTTGCAAGGCCGGCATTACAGCACTAGCATCCCGTGGGGCACACACATA
TGTAATGGTTTACTGTGTGGCGTATTGCGGTGATGCGCATGGGGGATTTC

Coding sequence (CDS) from alignment at Contig_72:530758..537257+

>mRNA_13462 ID=mRNA_13462|Name=jgi.p|Trimin1|350798|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2361bp|location=Sequence derived from alignment at Contig_72:530758..537257+ (Tribonema minus UTEX_B_3156 )
ATGCCCAGCAAAGCGGTGCCAGTTGCCGTGGTGGCGTTTGCGCTGTGCCT
GGGGACACACGCCTTCCTCTCTCCACAGTCATGCACTGCACAGCGGCGAG
CGAGCGCTGCGCCTCAGCTGTCCATGAGCAGTGGCAGCGGCAACGGCGGC
GATGACATGGCAAAGCTCAGGAGAGATCTGGCCGTCTCCGTTGCGGCCGC
CTCCCTCTTCGTGCTTCCTGCAATTGCCACGGCAAACGAGTTCCCATCTG
GCGCGGGATCCTCCTTTGCCCAGGAGCAGAAGCTGCTGCAAAAGCTGCTT
AAGGAGGACACAGAGGTGAAAGCGGAGACTGTGCCGGACGTGCCTGCGGC
ACCGCAGGTGGAGGTGCCGCCGTGGATGGCGTTGCCCGAGGTGCAGCCTG
TTGGCGGCGGGCTCAAGCTGCGGGAGCCGGTCTTCCAGAAGTTTGACTTT
ACAAAGGCGCTGGAGGGCATGGACTTCAAGTTGGGTGCGCCTGACTACGG
CAAATACAAGTTCAACATCAACGCCGCTGCGCCCACGCGCTGGGAGGACA
GGCCCCCGGTGAACGTACCGCCGCAGCTGCAGAGCGTGCTCACGAACCTC
GCGCAGAAGCGCGCGGAGCTGCAGGCGGCGTGGGAGCGCGCGCCGCCGCT
GCCCGCGGACGCCGCGGCAGCGCTCCAAGCCCTAGATGACGCCGCCACCA
AGGCGCTGAAGCCCTACCTCAAGGACGACGTGCCGCCGGGGTTCGCGCTC
GGCCTGCTGGCGAGCGCCGGCGTCGCGGCTGCTGGGCTCAACAGCGCCGC
GGCGAATGCGGGCGCGGCCAGCTACAAGGGGAGCTATGGCGGCAGCAGCG
GCGGCGGCAGCGGCGGCGGCGGCGGCGCAGCGGTGGCGGAGAAGGCATCC
GCAGCGCCGGGGGGCAAGGGGAAGGAGGAGGAGGAGGGGGAGGGGGATGC
GGAGGTGCCTGTGAGCGCCAGCAGCGGCGCTGGCGCCACCGTGGCGGAGC
TGGCTACGCTCCGCAAGGAGCTTGACAGCGCTGTCAAGACCATCAAAGAG
CTGCGCACGGATATACTGGCGCTGCAGGGCCACAACGACCAGCTTGCTGC
AGAGCTGCGAGAGTTGCGGCGGCGGCCGGACCCAGCGGCGGTGGCGGCGG
CCGCGGAGGCAGCGGCGGCGCAGCAGGAGAAGGACGCACAGGAGCGGGAG
GCGCGCGCGAAGGTCGCAAAGGAGCAGGAGGTCCTCGCAGCAAAGATGGC
GGAGGCGCGCGCCGCGCTGTCCCAGGGGTTCCCCTCCATGAAGGAGGTCA
CAAAGGCCAAGACGGTCTACGCAGACGAGACGCAGGAGGTGCGCGCTGCC
GCAGACGCCGTCGCAGAGGCGACCGCCGCGTCCAAGCAGGCGCGCGAAAG
CAAGACGAGCGCAGCCGCCGCTGCCGCCGCCGCCGCGCCCAAGAGACCCG
CCGCTGCCGCCAAAAAGGCGGCGGCGGCCACGGCGCCCGCACCGCAGAGC
TCTGACCCCGTCAAGGCCGCGATGGATGACGTGGAGTCGAAGCTGGCGGG
CAAAGCGGAGGCCGAGGCGGAGAAGTTGAGCGCTGATGCGGAGAAGGCGG
CGCGCGCGGTCGCTGCCAAGGCGCCCGCGAAGCCGCGCGCCAAGAAGGCC
GCCGCCGCCGCAGCGCCCGCTGCCAAGGCCGCGCCGGCGCAGGCAGCGGC
AGCGGCGGCGCCAGCGGCGGCGGCAGCGGCGCCGGCGGCAGCGGCGGCGG
TCGCTCAGCAGTCGCAGGAGCCCAAGGCCGAGATCACTGCTGCTGCAGAG
CCCGCAGCGGCGCCGGCGGTGGCACAGCAGGCGGAGGTGCGCAAGGAAGA
GCCAGCGGCGCCTGCGAAGCCTGCAGCGGCGGCCAAGCCGGCGGCGGCGG
CTAAACCTGCGGCAGCCAAGCCCGCCGCTGCGGCGAAGCCCGCGGCAGCC
GCCAAGCCGGCAGCTGCGGCGAAGCCAGCACCTGCCAAACGAGCGGCTGC
CAAGTCGGCAGCTGCCAAGCCAGCTGCTGCCAAACGAGCTGCTGCCAAGC
CAGCTGCCAGCGCCAAGCGGAGCGCTGCCGCTAAGCCTGCGGAAGCGGCG
GACGCGGCGGCGGCGGCGCAGCCTGCAGCTGCCGCCAAGCCCGCCGCAGC
TGCAAAGCCCGCCGCTGCTTCGCCGGCCGCAGCACGCAAACAGGCCTTAG
GGCTGCCTGACGGGTGGGTCCCTTCGGAGAAAGCCTTAGACCTCATGTCG
GTGGCACAGCTGAAGGGGTTCCTGAAGGAAGAGGGGTTGCCGCAGACGGG
TAAAAAGGATGATCTCAAAGCCACGATCATGGAATACTTTGCCAAGAACG
CCAACAAATGA