mRNA_1336 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161781
Unique NamemRNA_1336
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A835Z7A5_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A5_9STRA)

HSP 1 Score: 660 bits (1703), Expect = 6.810e-240
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1
Query:    1 MNLIPEYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI 966
            MNLIPEYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI
Sbjct:    1 MNLIPEYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI 322          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A835ZCM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCM1_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.950e-101
Identity = 168/292 (57.53%), Postives = 188/292 (64.38%), Query Frame = 1
Query:    1 MNLIPEYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLF 876
            MNLI EYRS  VA+E  KAALERDGVAVVP VI  + LPSLR SMW TFETLT+GRLQR DP+TF+V+S+F PIHSMLYQHW LGHAQYVWDVR +AGVI TFS LW T DLITSFDGVSLHLPFEDTKKG                        AVNLYDV+AGDATTRVLTGS+ LH++YM+H NIDT ++DW K PK+A EEH++FFL+RG                                                      QRKRKQIF DKRMTTHLPQQAK+F
Sbjct:    1 MNLIDEYRSCTVALEEAKAALERDGVAVVPAVIQEDELPSLRESMWGTFETLTQGRLQRADPSTFAVLSEFLPIHSMLYQHWKLGHAQYVWDVRSAAGVITTFSTLWDTPDLITSFDGVSLHLPFEDTKKG------------------------AVNLYDVDAGDATTRVLTGSYKLHKQYMEHCNIDTRTSDWSKFPKNAHEEHLDFFLKRGL-----------------------------------------------------QRKRKQIFDDKRMTTHLPQQAKMF 215          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A5E8CGZ7_9ZZZZ (Uncharacterized protein n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CGZ7_9ZZZZ)

HSP 1 Score: 292 bits (747), Expect = 1.450e-94
Identity = 142/319 (44.51%), Postives = 199/319 (62.38%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLT---EGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRL 963
            EY+   V +E +   L+ DGVAV+  V++   L   +++MW T  TLT   E  +Q+ +P+T+      YPIHSML QHW +GH+QYVWDVR +  V+  F E+W  N+L+ SFDGVS+H P E T +G+Y+GNDW HTDQ   +  L   QG V LYDVN GDAT R+L GSH  H+ + +  +I     DW+K+  D     +N+F E   EK C+LA AG ++LWDSRT HQG+E +K R + N R +VYVCM P+S +      K+++ F + R+T+H P + KLFPK PRTYG    ++  +  PVL+    +L
Sbjct:    3 EYKEHYVELENIHQKLKNDGVAVIKNVLNQSELEEAKSNMWATLNTLTTNLEKPIQKTNPSTWRTFYSLYPIHSMLVQHWSIGHSQYVWDVRQNQKVVNVFKEIWNNNNLLCSFDGVSVHFPPEKTNRGWYKGNDWFHTDQSRLKVGLNCIQGMVTLYDVNPGDATLRILKGSHEKHQSFFEDNDIQE-KGDWYKLKND----EINYFDEY--EKNCILAKAGSLILWDSRTFHQGIEPRKEREKANFRGIVYVCMTPKSWSDEKNILKKQKAFNEMRLTSHWPHKIKLFPKNPRTYGKELENINTINPPVLSSLGMKL 314          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A6C0BS82_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BS82_9ZZZZ)

HSP 1 Score: 259 bits (662), Expect = 1.140e-81
Identity = 135/321 (42.06%), Postives = 189/321 (58.88%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLT---EGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTN--DLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRL 963
            EY  +    E VK  + R G A+VP V+ +  + +++  MW   E  T   E  + R DP T+      YP HSML Q + +GH+Q+VWD+R +  V+  FS++W     DL+TSFDG S H P E+T +G+YR   W HTDQ   R D    Q  V  YDV+ GDAT   +  S+V H+E+ Q  N  +  +DW+K  +    E   F+ ++GCE+  +   AGDMV WDSRT+H G E  + R ++N R+VVYVCM PR  AT A  RK+++ F + RMTTH P + KLFP  PRTYGG  P+V  +P P LT+  +++
Sbjct:    4 EYEKYLTTPENVKDTVLRYGAAIVPSVLDSSEIENMKLGMWSYLENTTQNFERPIDRNDPKTWVEYQKLYPKHSMLLQQYQIGHSQFVWDIRQNPKVVNIFSQIWSEKPEDLLTSFDGASFHFPPEETNRGWYR-QTWYHTDQSYFRPDFECIQSWVTAYDVHEGDATLAFMESSNVYHKEF-QEVNKVSDKSDWYKHTR----EEQYFYEKKGCEEKRIKCKAGDMVFWDSRTIHCGTEPIRKRKEQNLRNVVYVCMKPRKYATEANLRKKRKAFDELRMTTHWPHKPKLFPVNPRTYGGPLPNVVPVPKPELTELGKKI 318          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A6C0BGI3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BGI3_9ZZZZ)

HSP 1 Score: 242 bits (617), Expect = 7.750e-75
Identity = 127/321 (39.56%), Postives = 182/321 (56.70%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLT---EGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWG--TNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRL 963
            EY ++    E +K  +++ GVA++PGV+      ++ N +W+  E ++   E  L R  P T+      YP+HSML QHWG+GHAQ  WDVR +  ++  F+  W     DL+ SFDG+S +LP E T +G+ R N W HTDQ  +  +L   Q  V   DV  GDAT   L  S+  H E+   F++ T + +W+K+     EE   F+ + GC    +    G MV WDSRT+H GVEA K RA  N R+V+Y+C +PRS  T A  +K+++ F + R T+H P   KLF K PRTYGG  P++  +P P+L    R L
Sbjct:    7 EYETYLCTKETLKETIQQYGVAIIPGVLDEVECEAMVNGIWDFMEHISQSWEKPLHREKPDTWREFYKLYPLHSMLLQHWGVGHAQASWDVRQNQKIVDIFAHFWECRVEDLLVSFDGLSFNLPPETTNRGWNRNNTWYHTDQSYTTPELKCIQSWVTGLDVKEGDATLSFLESSNRYHAEFRDAFDV-TDTKNWYKL----TEEQQQFYEQHGCPIKNIKCPKGSMVFWDSRTIHCGVEASKHRALPNVRAVIYLCYMPRSLCTKANLKKKQKAFHELRTTSHYPCSIKLFSKTPRTYGGDMPNITPIPTPILNPLGRSL 322          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A3G4ZYX3_9VIRU (Uncharacterized protein n=1 Tax=Gaeavirus sp. TaxID=2487767 RepID=A0A3G4ZYX3_9VIRU)

HSP 1 Score: 239 bits (609), Expect = 1.170e-73
Identity = 124/311 (39.87%), Postives = 183/311 (58.84%), Query Frame = 1
Query:   49 VKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEG---RLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGT--NDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI 966
            +K  L   GVA++P VI A  + ++   +W+  E +T+     +QR D  +++     +  HSML QH+G+GHAQY+W++R +  +I+ F++LW    ++L+ SFDG S HLP E TK+G+     WLHTDQ  +RND    Q  V  YDVN GDAT   L  SH+ H++    F I T + DW+K+  D ++     F +  C++  +  +AG MV WDSRT+H G EA K R   N R++VYVCM+P+S  + +   KR++ F D R T H   +  LFPK+PRTYG   P++  +  P+LT     LI
Sbjct:   18 LKETLNVYGVAIIPNVIDAGEIDAMNTGVWDYLEHITQTCDIPIQRDDINSWNTFYKLFVKHSMLMQHFGIGHAQYIWNLRQNPKIIKIFAKLWNVKEDELLVSFDGASFHLPPEITKRGWNTNVSWLHTDQSPTRNDFECIQSWVTGYDVNDGDATLTFLEKSHMFHKQLASTFKI-TSTEDWYKLNDDELK-----FYKTYCQQKYIKCSAGSMVFWDSRTIHSGAEAMKTREISNFRNIVYVCMMPKSLCSDSMLAKRQKAFDDLRTTNHWVSKTMLFPKIPRTYGKPVPNILNITTPILTDVGIGLI 322          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A139AZS2_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZS2_GONPJ)

HSP 1 Score: 238 bits (607), Expect = 2.330e-73
Identity = 130/323 (40.25%), Postives = 176/323 (54.49%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEG---RLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWG--TNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNI-DTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI 966
            E   +   ++ +++ L+  GVA++P V++     ++ N  W  FE +T G    + R D  ++  +    P+H ML+Q +GLGHAQ +W+VR +A V+  F +LW    NDL+ SFDGV    P E T +G++RGN W H DQ  +R      Q  V   DV  GDAT   L GSH L  E  + F + D G  DWHK+ ++  E + N      C    +    G MVLWDSRT+H G E  K RA  +TR V YVC  PR+   P    KRK+ F D RMT+H P   KLFP  PRTYG A P +  LP P+L    RRL+
Sbjct:    6 ENERYITTIDSLRSTLDTYGVAILPSVLTEAECDNMLNGTWAAFEHITAGWEKPVTRADSDSWKGLGKLLPMHGMLWQWYGLGHAQAIWEVRQNARVVAPFEKLWDREANDLLVSFDGVGFCPPPETTGRGWFRGNTWYHADQSFTRVGFECVQSWVTACDVEEGDATLAFLEGSHKLFAEAAKEFKLKDKG--DWHKLTEEEEEWYAN-----KCPPKRIKCAKGSMVLWDSRTIHCGGEPVKARASPHTRCVAYVCYAPRTKCAPKMLEKRKRAFEDLRMTSHWPANVKLFPTSPRTYGKAMPELRELPSPILADLGRRLV 321          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A139AZ01_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZ01_GONPJ)

HSP 1 Score: 237 bits (604), Expect = 6.790e-73
Identity = 130/322 (40.37%), Postives = 185/322 (57.45%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLTEG---RLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWG--TNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDPVLTQAARRLI 966
            E   +  +++ +++ L+  GVA++P V++     +L N +W  FE ++ G    + R    ++  + + Y +H+ML+Q +GLGHAQ VW+VR +  VI  F +LW    ++L+ SFDGV    P E T +G++ G  W HTDQ  +R +    Q  V   DV+ GDAT  VL GSH L  E   HF   T ++DW+K+  + VEE   +++E+GC +  +    G MV WDSRT+H G E  + RA  +TR V YVC  PRS   PA+  KRK  F D RMT+H P   KLF K PRTYG A P V  LP P L+   R L+
Sbjct:    6 ESEKYLTSIDNLRSTLDTYGVAILPSVLTEAECENLENGVWGAFEHISAGWDRPISRARKDSWKGLGNLYHLHNMLWQSFGLGHAQAVWEVRQNPRVIAPFEKLWDCEASELLASFDGVGFAPPPETTGRGWFDGKTWYHTDQSYTRVNFECVQSWVTACDVDEGDATLCVLEGSHKLFAEAGHHFKA-TSTSDWYKL--NDVEEA--WYVEKGCTRKRIKCTKGSMVFWDSRTIHCGGEPIRLRASPHTRCVAYVCYAPRSNCGPASLEKRKTAFEDMRMTSHWPTNVKLFSKTPRTYGKAKPDVRELPRPTLSDLGRSLV 322          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A6C0KU99_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KU99_9ZZZZ)

HSP 1 Score: 232 bits (591), Expect = 8.240e-71
Identity = 126/329 (38.30%), Postives = 184/329 (55.93%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLT---EGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTN--DLITSFDGVSLHLPFE---DTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYGGAAPSVGALPDP----VLTQAARRLI 966
            +Y  +    E  +A L++ GVA++P V+S + + ++ + +W   E LT   +  + R  P T+S      P HSML Q++G+GH+QY+W++R +  V R F+ELW  +  DL TSFD VS  +P E    T+KG++   DW+H DQ   R DL  YQ  V  +DV  GDAT  +L  SH+LH+E+         S+DWHK+ +D       ++ E+GC +  +   AGDMV+WDSRT+H G    K RA +N R VVYV M P+   +    + R   F  +RMTTH+P + KLF   P TYG   P + +L +      LT   R L+
Sbjct:    9 KYDEYLSTPETARATLDKYGVAIIPAVLSQDQISAMNDGIWTVLEKLTAKFDVPIDRSKPETYSSFYKLEPNHSMLIQYFGVGHSQYIWNIRQNPNVARVFAELWSCSPTDLHTSFDAVSFAIPPEIMNSTRKGYHH-RDWMHCDQSFRRTDLECYQAWVTGFDVVDGDATLAILEKSHLLHKEFADAVLKTPPSSDWHKLKEDQEA----WYKEKGCSRVSIKCRAGDMVIWDSRTIHCGQGPVKKRASKNYRHVVYVAMTPKKMTSGRVLKNRISAFEKRRMTTHMPYKCKLFGLKPHTYGKPLPDIQSLDETNEPLALTDLGRSLV 332          
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Match: A0A6C0LBF7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LBF7_9ZZZZ)

HSP 1 Score: 228 bits (581), Expect = 1.830e-69
Identity = 119/299 (39.80%), Postives = 173/299 (57.86%), Query Frame = 1
Query:   16 EYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFETLT---EGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVIRTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDLVSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPKDAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQR-NTRSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYG 900
            EY  +    E +K  + + GVA+ P ++  E   ++  + WE  E LT   E  + R + AT+  +++ +P H ML QHW +GH++  W+VR +  VI  F+++WGT+DLI SFDG S+++  +  ++     N W H DQ  +RN+    Q  VN YD N GDAT  +L  S+  H E+ + F I T   DW+K+   A +E  +F++ +GC +  +    G  V WDSRT+H G   QK  A   N R VVYVCMVPR+ A      KR +IF + RMT+H P +A LFPK+PRTYG
Sbjct:    7 EYEKYLCDAENIKETVIKYGVAICP-ILDTEECENMIENKWEVLEKLTAEFEVPIDRNNKATYKQITELFPNHKMLIQHWKIGHSKLAWEVRQNKKVIEAFAKIWGTDDLIVSFDGASIYILDKPNRES----NSWFHVDQSYTRNNFECIQSWVNAYDTNEGDATLVILENSNSFHEEFQKEFKI-TDKKDWYKL---ANKEQYDFYVNKGCREVAIKCPRGYGVFWDSRTLHYGNPVQKTAADNYNYRCVVYVCMVPRAFAKKKDLEKRVRIFNELRMTSHWPNKATLFPKLPRTYG 296          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161781 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7A5_9STRA6.810e-240100.00Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
A0A835ZCM1_9STRA1.950e-10157.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5E8CGZ7_9ZZZZ1.450e-9444.51Uncharacterized protein n=1 Tax=seawater metagenom... [more]
A0A6C0BS82_9ZZZZ1.140e-8142.06Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0BGI3_9ZZZZ7.750e-7539.56Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A3G4ZYX3_9VIRU1.170e-7339.87Uncharacterized protein n=1 Tax=Gaeavirus sp. TaxI... [more]
A0A139AZS2_GONPJ2.330e-7340.25Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A139AZ01_GONPJ6.790e-7340.37Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A6C0KU99_9ZZZZ8.240e-7138.30Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0LBF7_9ZZZZ1.830e-6939.80Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:733589..734672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161781|e_gw1.18.91.1
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
COG categoryS
Max annot lvl4751|Fungi
EggNOG OGs2E1NR@1|root,2S8YZ@2759|Eukaryota,39QBP@33154|Opisthokonta,3Q6GV@4751|Fungi,3RPEF@4890|Ascomycota,205ID@147541|Dothideomycetes,3MPEG@451867|Dothideomycetidae
Evalue3.13e-43
Seed ortholog83344.XP_007919884.1
Hectar predicted targeting categoryother localisation
TranscriptId162103
TrackFilteredModels1
ProteinId161781
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161781gene_1336Tribonema minus UTEX_B_3156 geneContig_18 733589..734672 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1336_1exon_1336_1Tribonema minus UTEX_B_3156 exonContig_18 733589..733978 +
exon_1336_2exon_1336_2Tribonema minus UTEX_B_3156 exonContig_18 734094..734672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1336CDS_1336Tribonema minus UTEX_B_3156 CDSContig_18 733589..733978 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161781Trimin1|161781|e_gw1.18.91.1Tribonema minus UTEX_B_3156 polypeptideContig_18 733589..734672 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1336 ID=mRNA_1336|Name=jgi.p|Trimin1|161781|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=969bp|location=Sequence derived from alignment at Contig_18:733589..734672+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCTTATACCGGAATACAGGAGTTTCAACGTTGCGGTAGAGGGGGT
GAAAGCCGCACTGGAGCGAGACGGAGTTGCGGTGGTGCCTGGGGTGATTT
CGGCAGAATCGCTGCCTTCACTGAGGAATAGCATGTGGGAGACATTTGAG
ACACTTACTGAGGGTCGTTTGCAGCGTGGAGACCCTGCCACATTTTCCGT
AATGTCAGATTTTTATCCTATACACTCCATGCTGTACCAGCACTGGGGGT
TGGGGCATGCACAATATGTCTGGGATGTCAGGGGCTCAGCTGGTGTGATC
AGGACCTTCTCTGAGCTCTGGGGCACAAACGACCTCATCACCAGCTTTGA
CGGCGTGTCTCTGCATTTGCCGTTTGAAGATACCAAGAAGGGGTTCTATC
GCGGCAACGACTGGCTGCATACCGATCAGAGGTCGTCCCGTAATGATTTG
GTGTCATACCAAGGCGCCGTCAACCTGTATGATGTCAACGCCGGCGACGC
CACCACAAGAGTGTTGACAGGGAGCCATGTGCTGCACCGCGAGTACATGC
AGCACTTCAACATTGACACGGGGAGCGCTGATTGGCACAAGATGCCAAAG
GATGCGGTGGAGGAGCATGTCAACTTCTTTTTGGAGAGGGGATGCGAAAA
GGCATGTGTGCTGGCCAACGCGGGGGACATGGTACTATGGGATAGTCGGA
CAATGCATCAAGGCGTGGAAGCGCAAAAGGGGCGCGCGCAACGTAACACT
CGCTCTGTTGTGTACGTTTGCATGGTGCCGAGGTCGACAGCAACGCCTGC
AGCGCAGCGGAAGCGCAAGCAGATTTTTGCTGACAAGCGCATGACTACGC
ACCTCCCCCAGCAGGCTAAGCTCTTTCCCAAGATGCCTCGTACATATGGT
GGCGCGGCGCCCTCTGTTGGTGCTCTGCCCGATCCTGTGCTTACGCAGGC
GGCGCGTCGCCTGATTTGA
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protein sequence of jgi.p|Trimin1|161781

>Trimin1|161781|e_gw1.18.91.1 ID=Trimin1|161781|e_gw1.18.91.1|Name=jgi.p|Trimin1|161781|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=323bp
MNLIPEYRSFNVAVEGVKAALERDGVAVVPGVISAESLPSLRNSMWETFE
TLTEGRLQRGDPATFSVMSDFYPIHSMLYQHWGLGHAQYVWDVRGSAGVI
RTFSELWGTNDLITSFDGVSLHLPFEDTKKGFYRGNDWLHTDQRSSRNDL
VSYQGAVNLYDVNAGDATTRVLTGSHVLHREYMQHFNIDTGSADWHKMPK
DAVEEHVNFFLERGCEKACVLANAGDMVLWDSRTMHQGVEAQKGRAQRNT
RSVVYVCMVPRSTATPAAQRKRKQIFADKRMTTHLPQQAKLFPKMPRTYG
GAAPSVGALPDPVLTQAARRLI*
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mRNA from alignment at Contig_18:733589..734672+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1336 ID=mRNA_1336|Name=jgi.p|Trimin1|161781|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1084bp|location=Sequence derived from alignment at Contig_18:733589..734672+ (Tribonema minus UTEX_B_3156 )
ATGAATCTTATACCGGAATACAGGAGTTTCAACGTTGCGGTAGAGGGGGT GAAAGCCGCACTGGAGCGAGACGGAGTTGCGGTGGTGCCTGGGGTGATTT CGGCAGAATCGCTGCCTTCACTGAGGAATAGCATGTGGGAGACATTTGAG ACACTTACTGAGGGTCGTTTGCAGCGTGGAGACCCTGCCACATTTTCCGT AATGTCAGATTTTTATCCTATACACTCCATGCTGTACCAGCACTGGGGGT TGGGGCATGCACAATATGTCTGGGATGTCAGGGGCTCAGCTGGTGTGATC AGGACCTTCTCTGAGCTCTGGGGCACAAACGACCTCATCACCAGCTTTGA CGGCGTGTCTCTGCATTTGCCGTTTGAAGATACCAAGAAGGTAAGATGGT TATAGCAACTTCACATGCATGTTACTGCTTGGTTTCGAATTTGATACGTG CTATCAATGCTCACAATGCTCACACATTCAACTTGCTTGCTTTCCTCGAA TTCAGGGGTTCTATCGCGGCAACGACTGGCTGCATACCGATCAGAGGTCG TCCCGTAATGATTTGGTGTCATACCAAGGCGCCGTCAACCTGTATGATGT CAACGCCGGCGACGCCACCACAAGAGTGTTGACAGGGAGCCATGTGCTGC ACCGCGAGTACATGCAGCACTTCAACATTGACACGGGGAGCGCTGATTGG CACAAGATGCCAAAGGATGCGGTGGAGGAGCATGTCAACTTCTTTTTGGA GAGGGGATGCGAAAAGGCATGTGTGCTGGCCAACGCGGGGGACATGGTAC TATGGGATAGTCGGACAATGCATCAAGGCGTGGAAGCGCAAAAGGGGCGC GCGCAACGTAACACTCGCTCTGTTGTGTACGTTTGCATGGTGCCGAGGTC GACAGCAACGCCTGCAGCGCAGCGGAAGCGCAAGCAGATTTTTGCTGACA AGCGCATGACTACGCACCTCCCCCAGCAGGCTAAGCTCTTTCCCAAGATG CCTCGTACATATGGTGGCGCGGCGCCCTCTGTTGGTGCTCTGCCCGATCC TGTGCTTACGCAGGCGGCGCGTCGCCTGATTTGA
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Coding sequence (CDS) from alignment at Contig_18:733589..734672+

>mRNA_1336 ID=mRNA_1336|Name=jgi.p|Trimin1|161781|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=969bp|location=Sequence derived from alignment at Contig_18:733589..734672+ (Tribonema minus UTEX_B_3156 )
ATGAATCTTATACCGGAATACAGGAGTTTCAACGTTGCGGTAGAGGGGGT
GAAAGCCGCACTGGAGCGAGACGGAGTTGCGGTGGTGCCTGGGGTGATTT
CGGCAGAATCGCTGCCTTCACTGAGGAATAGCATGTGGGAGACATTTGAG
ACACTTACTGAGGGTCGTTTGCAGCGTGGAGACCCTGCCACATTTTCCGT
AATGTCAGATTTTTATCCTATACACTCCATGCTGTACCAGCACTGGGGGT
TGGGGCATGCACAATATGTCTGGGATGTCAGGGGCTCAGCTGGTGTGATC
AGGACCTTCTCTGAGCTCTGGGGCACAAACGACCTCATCACCAGCTTTGA
CGGCGTGTCTCTGCATTTGCCGTTTGAAGATACCAAGAAGGGGTTCTATC
GCGGCAACGACTGGCTGCATACCGATCAGAGGTCGTCCCGTAATGATTTG
GTGTCATACCAAGGCGCCGTCAACCTGTATGATGTCAACGCCGGCGACGC
CACCACAAGAGTGTTGACAGGGAGCCATGTGCTGCACCGCGAGTACATGC
AGCACTTCAACATTGACACGGGGAGCGCTGATTGGCACAAGATGCCAAAG
GATGCGGTGGAGGAGCATGTCAACTTCTTTTTGGAGAGGGGATGCGAAAA
GGCATGTGTGCTGGCCAACGCGGGGGACATGGTACTATGGGATAGTCGGA
CAATGCATCAAGGCGTGGAAGCGCAAAAGGGGCGCGCGCAACGTAACACT
CGCTCTGTTGTGTACGTTTGCATGGTGCCGAGGTCGACAGCAACGCCTGC
AGCGCAGCGGAAGCGCAAGCAGATTTTTGCTGACAAGCGCATGACTACGC
ACCTCCCCCAGCAGGCTAAGCTCTTTCCCAAGATGCCTCGTACATATGGT
GGCGCGGCGCCCTCTGTTGGTGCTCTGCCCGATCCTGTGCTTACGCAGGC
GGCGCGTCGCCTGATTTGA
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