mRNA_13359 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353021
Unique Name	mRNA_13359
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353021 vs. uniprot
Match: A0A835ZAD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD5_9STRA)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 1

Query:    1 MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ 1635
            MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ
Sbjct:    1 MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLLWDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYSDLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGXXXXXXXXXXXXACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPGLQEWAPEGLLLPVRVLASLAAVLIMLHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVAFARSAXXXXXXXXVALAXXXXXXXXXXXXGMAALLSAPLGAAAYAATIHRAAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ 545

[Close]

BLAST of jgi.p|Trimin1|353021 vs. uniprot
Match: D8LRC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC3_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.510e-9
Identity = 53/141 (37.59%), Postives = 70/141 (49.65%), Query Frame = 1

Query: 1063 LLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAEG--GGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLR 1479
            L  V LAFW  G     W GK +FA S LAGVL TWR GL  E A+   G W    N QA ++R +T  G+ L+    +D +   A+   AL+    A+   R  +W ++        Q+   EYE QG +YT   IA LR
Sbjct:  440 LPGVMLAFWKMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTW---FNGQACIRRVLTFSGVFLVYNGVSDTDVGMALVVLALMAPTLAHYARRYNMWCNSSRWYRAGNQLSQEEYEAQGDAYTREAIAALR 577

[Close]

BLAST of jgi.p|Trimin1|353021 vs. uniprot
Match: A0A7S2AQW5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AQW5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.670e-9
Identity = 55/184 (29.89%), Postives = 86/184 (46.74%), Query Frame = 1

Query: 1063 LLDVSLAFWHFG-------AFGVAWLGKLYFAGSALAGV-LVTWRWGLLR---EPAEGGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAAYIWWRARVWYDNIGVAPH-CEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNPLAYRKVKPSKWSAMDHFRQGFPHVSR 1578
            L D+ L FWH G        + + WLGK YF   AL G+    WR G  R   +  E   W      Q  + + + ++ +  LL ST   E +  +    L   W   IW   RV +     +P+   QI  + YE Q + YT+A++++LRAY+Q +P    ++ P   + + +F +G  HV R
Sbjct:    2 LFDLLLTFWHKGLSPLGIVGWELPWLGKFYFTCGALTGLGFERWR-GCFRYSCDEFEDNNWNTGRCGQLYLLKGIRSMAVICLLHSTASFELSLLVV--LLACRWD-LIWHGFRVVHHKFNRSPYYASQISRSAYEEQSKEYTEAEVSRLRAYLQTDPEQMYRLDPQTQALVRNFSRGADHVVR 181

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353021 vs. uniprot

BLAST of jgi.p|Trimin1|353021 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835ZAD5_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LRC3_ECTSI	1.510e-9	37.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2AQW5_9STRA	3.670e-9	29.89	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_141	contig	Contig_141:88922..96097 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353021\|estExt_Genemark1.C_Ctg_1410014
Description	Protein tyrosine kinase
COG category	T
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0515@1\|root,KOG0192@2759\|Eukaryota,3QAX6@4776\|Peronosporales
Evalue	2.78e-08
Seed ortholog	4787.PITG_02264T0
Hectar predicted targeting category	other localisation
TranscriptId	353343
Track	FilteredModels1
ProteinId	353021

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353021	gene_13359	Tribonema minus UTEX_B_3156	gene	Contig_141 88922..96097 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13359_1	exon_13359_1	Tribonema minus UTEX_B_3156	exon	Contig_141 88922..89092 +
exon_13359_2	exon_13359_2	Tribonema minus UTEX_B_3156	exon	Contig_141 89629..89758 +
exon_13359_3	exon_13359_3	Tribonema minus UTEX_B_3156	exon	Contig_141 90126..90422 +
exon_13359_4	exon_13359_4	Tribonema minus UTEX_B_3156	exon	Contig_141 91785..91876 +
exon_13359_5	exon_13359_5	Tribonema minus UTEX_B_3156	exon	Contig_141 91990..92172 +
exon_13359_6	exon_13359_6	Tribonema minus UTEX_B_3156	exon	Contig_141 92491..92535 +
exon_13359_7	exon_13359_7	Tribonema minus UTEX_B_3156	exon	Contig_141 92696..92722 +
exon_13359_8	exon_13359_8	Tribonema minus UTEX_B_3156	exon	Contig_141 92829..92980 +
exon_13359_9	exon_13359_9	Tribonema minus UTEX_B_3156	exon	Contig_141 93777..93965 +
exon_13359_10	exon_13359_10	Tribonema minus UTEX_B_3156	exon	Contig_141 94494..94632 +
exon_13359_11	exon_13359_11	Tribonema minus UTEX_B_3156	exon	Contig_141 95316..95381 +
exon_13359_12	exon_13359_12	Tribonema minus UTEX_B_3156	exon	Contig_141 95873..96097 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13359	CDS_13359	Tribonema minus UTEX_B_3156	CDS	Contig_141 88922..89092 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13359	UTR3_13359	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_141 96020..96097 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353021	Trimin1\|353021\|estExt_Genemark1.C_Ctg_1410014	Tribonema minus UTEX_B_3156	polypeptide	Contig_141 88922..96019 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_141:88922..96097+
coding sequence from alignment at Contig_141:88922..96097+

spliced messenger RNA

>mRNA_13359 ID=mRNA_13359|Name=jgi.p|Trimin1|353021|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1716bp|location=Sequence derived from alignment at Contig_141:88922..96097+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCCGCTGACCACGCAGCCAGAGGAACAGGGCCTGATCCTGGCTTA
CCTGCAGTCGTGGGCGGTAAACGGGGGGCATCTGGCGGTGGCTAGCGCGC
GGTTGCTCGCTGCCATCGGCAAGACCCTGGCACGGCGGCTGCCGCTGCTC
TGGGACAACGTGGTGTTTGAGGTGGCGGGCCTGCCGGAGGACCTCAGCGC
TCAGCTCGTGCTGTCGCAGGAGCCGTACGCGGCGCAGGCGCTCGCGTGCC
AGGCGCTCAAGGAGGCGGGCCGCTGGCTGGGGCACTGGGCGGTGTACTCA
GATCTGCGGCGGAAGGCGTGTTCCTTCGAGCTGGGACCGGTCCCGGGGCG
CGTTCTCTCGCTGCCGTGCGCGGCGCCGCGGCCCTCGTGGCTGTCCCGCC
TGCTGAGCAGTGGTGCAGGCAGCAGCAGCGGCGGCGACGGCGGCGGCGGC
GCCTGCGCCTGCGCCGGCGGCACGTGCTTCGTGGCGGTGGGTGCGCAGCG
CGCGCCAGAGATTCTGGTGCAGGGGGCGGTGGCGCGGGGGTTGCCGCTGC
AGTGCCAGGCGGTGTCGGAGCCGGTGCTGCGCAGGGTGCGCTTGCCAGGG
CTGCAAGAGTGGGCGCCGGAGGGGCTGCTGCTACCCGTGCGAGTGCTGGC
ATCGCTGGCGGCAGTGCTCATCATGCTGCACGCGGAGGACTGGGCGCCGG
AGGGAGTGCTGCTCCCCGTGCGCGCGCTGGCGTCGCTGGCGGCAGTGCTC
ATCGTGCTGCGCGCGGAGGACGTGGCGGAGAGCCGCGCGTTCCACTTTGT
GCTCTCCGCAGTCGTGGGGTGTGCGATAGCGGCGCTGGTGGTGGGCTACG
TCGCGTTCAATCTCGGGCGCAAGCTGGCGGACGCGGTGCCGGGCGTGGCG
TTCGCACGCTCAGCGTGGTTGGCGGACGCGGTGCCGGGCGTGGCACTGGC
GGACGCGGTGCCGGGCGTCGCCTTTGCGCGCTACGCGGGCATGGCGGCGC
TGCTGTCGGCGCCGCTGGGCGCTGCCGCGTATGCGGCCACCATCCACAGG
GCCGCTGCACTGCTGCTGGACGTGAGCCTCGCGTTCTGGCACTTTGGCGC
CTTTGGCGTGGCGTGGCTCGGCAAGCTGTACTTTGCGGGCAGTGCTCTAG
CGGGCGTGCTGGTAACGTGGCGCTGGGGCCTGCTGCGCGAGCCCGCGGAG
GGCGGCGGGTGGCGCGCATTGCTCAATGCGCAGGCGAACGTGCAGCGCGC
CGTTACCGCGGTGGGACTCGCGCTGCTGCTCGCGAGCACGACCGACGTCG
AAGCCGCGGCGGCAATCGCTGGGGCCGCGCTGCTGAGGGAGTGGGCGGCG
TACATCTGGTGGCGTGCGCGCGTGTGGTACGACAACATTGGCGTCGCGCC
GCACTGCGAGCAGATCGGGCATACGGAGTACGAGATGCAGGGCAGGTCCT
ACACGGACGCTCAAATAGCCAAGCTGAGGGCGTACATCCAGAAAAACCCC
CTCGCGTACCGCAAGGTGAAGCCCTCAAAGTGGTCGGCGATGGACCACTT
CAGGCAGGGCTTCCCGCACGTCTCGCGCGGCGGCGGCGACGCCTGTGAAG
ACGACGCGCCGGAACGCGCATGGCGCGTTTCGCAGTAGTTGGGGGGAGGT
GGCTGCTACGGGGGGGACGCACGACGTCAGCCCTCCCTTTCACGCACCGA
CAGACGCTTGTTGTAG

protein sequence of jgi.p|Trimin1|353021

>Trimin1|353021|estExt_Genemark1.C_Ctg_1410014 ID=Trimin1|353021|estExt_Genemark1.C_Ctg_1410014|Name=jgi.p|Trimin1|353021|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=546bp
MRPLTTQPEEQGLILAYLQSWAVNGGHLAVASARLLAAIGKTLARRLPLL
WDNVVFEVAGLPEDLSAQLVLSQEPYAAQALACQALKEAGRWLGHWAVYS
DLRRKACSFELGPVPGRVLSLPCAAPRPSWLSRLLSSGAGSSSGGDGGGG
ACACAGGTCFVAVGAQRAPEILVQGAVARGLPLQCQAVSEPVLRRVRLPG
LQEWAPEGLLLPVRVLASLAAVLIMLHAEDWAPEGVLLPVRALASLAAVL
IVLRAEDVAESRAFHFVLSAVVGCAIAALVVGYVAFNLGRKLADAVPGVA
FARSAWLADAVPGVALADAVPGVAFARYAGMAALLSAPLGAAAYAATIHR
AAALLLDVSLAFWHFGAFGVAWLGKLYFAGSALAGVLVTWRWGLLREPAE
GGGWRALLNAQANVQRAVTAVGLALLLASTTDVEAAAAIAGAALLREWAA
YIWWRARVWYDNIGVAPHCEQIGHTEYEMQGRSYTDAQIAKLRAYIQKNP
LAYRKVKPSKWSAMDHFRQGFPHVSRGGGDACEDDAPERAWRVSQ*

mRNA from alignment at Contig_141:88922..96097+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13359 ID=mRNA_13359|Name=jgi.p|Trimin1|353021|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7176bp|location=Sequence derived from alignment at Contig_141:88922..96097+ (Tribonema minus UTEX_B_3156 )
ATGCGCCCGCTGACCACGCAGCCAGAGGAACAGGGCCTGATCCTGGCTTA
CCTGCAGTCGTGGGCGGTAAACGGGGGGCATCTGGCGGTGGCTAGCGCGC
GGTTGCTCGCTGCCATCGGCAAGACCCTGGCACGGCGGCTGCCGCTGCTC
TGGGACAACGTGGTGTTTGAGGTGCGCGCAGTGAATACGCTCATGGCGTC
CATGCTTGATCGCTAAGATATTGACGTGCTTGTGCGTGCCAGTGGCGTGA
CTGCGAACAGGCGCAGGCACGGTGCCCGCGGCGACGAGGCTTCGGAGGGT
GCCTTGCAAAGCCGCCATGTGTCACGTGGCAGATGCCGCGCCAACAACAA
TCACACACGCGGCAGACGCCGCGCCATCAACAATCACACTTGCTCGCGGC
GGCCAGCAGCAACGCTGTGGCAGTGTCGCAGCACTCGATGCTCATGGCAT
CGAATACAAGAGGCCAAGGTTCAGGATACACCCTCACCTGTGCAGCAGCT
GTGGACGGCTGGTTCAACACCCGCGCCACAACGGACCGTCGCAGCGGCGC
GGAGACCCGCAGCACACTTGCCCACATGCTGTGTTATAGTCCTTCTTTGT
AGTATACATCCATGAGAGCAGGTAGCTATGGCCCATGTGCATGCCACCCA
CGACTGCCGCCAGCTAAAGTCGCCTCCGTTGCGCTGCTTTCCTGCTCGCT
GCTGCAGGTGGCGGGCCTGCCGGAGGACCTCAGCGCTCAGCTCGTGCTGT
CGCAGGAGCCGTACGCGGCGCAGGCGCTCGCGTGCCAGGCGCTCAAGGAG
GCGGGCCGCTGGCTGGGGCACTGGGCGGTGTACTCAGGTGTGTAGGGGTG
CTGCTGATCTACACGGCTGGGTAGGTATACTGCTGGTGCACACACATACT
GCGCGCATCGGGTCAGGACGAGGGTGTATGCAGTCAGCTGCCGTGGAAGA
TCACGACCCTCGTCAGCGTGCCGTCCCCTTGCGGTGCCAGCCGTGCAAGC
TCATCAGCTGGAAGACCAGCGCTGCGCGCCAATTGATGATCATCGGCAGC
ATCAGCAGCATCAGCAGCGCTCATCAGCCAGGAGCGTCACCGCAAGACGC
CCTTAAACTTGCAGTCTCCGTCAGCGGGCGCTCGCACATACATGCATCGC
CATCATCACGCGCCCCCCCCCCCACGTGATACACCTCATCGCTGCCGCGC
GCAGATCTGCGGCGGAAGGCGTGTTCCTTCGAGCTGGGACCGGTCCCGGG
GCGCGTTCTCTCGCTGCCGTGCGCGGCGCCGCGGCCCTCGTGGCTGTCCC
GCCTGCTGAGCAGTGGTGCAGGCAGCAGCAGCGGCGGCGACGGCGGCGGC
GGCGCCTGCGCCTGCGCCGGCGGCACGTGCTTCGTGGCGGTGGGTGCGCA
GCGCGCGCCAGAGATTCTGGTGCAGGGGGCGGTGGCGCGGGGGTTGCCGC
TGCAGTGCCAGGCGGTGTCGGAGCCGGTGCTGCGCAGGGTGCGCTTGCCA
GGTGAGGCGTGGCGGTCGAGTCGAGTCATTGAGTGAGTCAGTGGGCGACT
CGGGCTATGTTTTTAGTGTGAGGCGCTGGGTGGCTGGCTGATGCTGCCAC
GTGTGGTGGCTGCGGTACGCATAGCGACGGGGCGCGCAGGCACGCTGTCG
CTGGGCATCGAGCGCTCGCGCGCGTGGTGAGGCGTGGCGCGCGGTGAGTG
CCTGAGGGTCACCGTCAGGGTGAGGAGGGGGGCGAGGATCGCAGGGGAAC
GCTGGCGGGCATCATCAGTGCACGGAGTGCTGCGCTCAGGCTGGGTTTAG
GATCAGAGTCAGAATTGGGCGGGCGATGCTCAGTGCACGACACTGCAAAG
GCCGGCAGAGACGGTGCCACGGACACGGAGTCAGATTTAGGGTTGGGGTC
ATGGCACGCGGCGCCGTGACAATCACGCCCGCCATGAGCAAAGCCATGTT
GCAGGGGGCGCGCACACGCATGGCATCTCGTCGCGCCTGAGGACCTCAAG
ACAGGCCTTGACGATGGCCCCGGCCCGTCGGTGCCTCCGCAGCGGGCCAC
GCACGGCGGGGCTTCTCAAGCCTCGCCCCAACTTCAACTTCAACTCACCA
AGGGGTCCACGTACAGAGCTGCGCAACCGCACCCCAGAAAGGGCTGCCCC
TGTTGGTGCGTGCGATGGTGTGACAGCGCCCATCGCGCTGCGGCGGGTCG
GTGCACCTCAACATTAAGTTCAGCTCACCGTGGTAGTGGGGGGTCAGGGC
CTGCACCTCGGAAAGGGCTGCTCCTGCCGCTGTGCGAGCTGGGGCGATGG
CGCTGCTGCCATTCGAGCGCCGCTAGTGGCAGCGCTCAGCACGCCAAGGC
ACACCTCAAATCTCAACTTCAACTCCATGATGTCGACGAATGCACACTAT
CCACATGCGCGCTAGCCCAGCTCTCGCTCACGCTGGCAACGGTGAATGAC
CGTCGGTGTGCAGTGCTCTGCAAGAGTGGGCGCCGCAGGGAGTGTCCCTG
CCGCTGCGCGTGCTGGCGTGATGGCGCTGCTGCTAGTGGCAGCGCTCACC
ATGCCGTGATGCACCTCAATCTTAAGTTTAGCTGGCGCCATGGCGCCGCT
GTTAGTGGCAGCGCGCACCATGCTGCGATGCACAATATCAAGTTCAACTC
CTTGATATTGATGAATACCTCAAGTTGAACTCGTTGACTCAAGTTGAACT
CGTTGATATTGATCGATACATAAAATCCGTGCGCAGGGCTGCAAGAGGGT
GGGCACCGAAGGGAGTGCTGCTGCCCGTGCGCGTGCTGGCGCGATGGCGC
GATGCACCTCAACCTCAACTTTAACGCCCTGATGTCGAATGAATGCACAA
AATCCGTGTGCAGGGCTGCAAGAGTGGGCGCCGGAGGGGCTGCTGCTACC
CGTGCGAGTGCTGGCATCGCTGGCGGCAGTGCTCATCATGCTGCACGCGG
AGGACGTGGCGGAGCTGCAATCTCAACTTCAACTTCTTGATGCTGATGGC
TACCTAACTTAAACTCATTGGTATTGATCGTTAGATACATATATCCGTAT
GCTGCAGGGCTGCAAGAGTGGGCGCCGGAGGGAGTGCTGCTCCCCGTGCG
CGCGCTGGCGTCGCTGGCGGCAGTGCTCATCGTGCTGCGCGCGGAGGACG
TGGCGGAGAGCCGCGCGTTCCACTTTGTGCTCTCCGCAGTCGTGGGGTGT
GCGATAGCGGCGCTGGTGGTGGGCTACGTCGCGTTCAATCTCGGGCGCAA
GGTGCGTTTCGGCAGTGTTGAGAAGCGGGGACTGAGGTGTTGCTGCCGCT
GGCGCGATGCTGTTAGCAGAACGTGTGCTTCATCAGCGGCCACAGAGAGC
CTTTTTGCAGCGCCGCGCCTGCAGCACCGCCGGACCCCAAACAGAGGGCG
CTTGGTGCTGCATGCTACGCCAGCAACAGTAGCGGCATGCTGTTCAGAGG
TGCTGCCATGCAAAAGCATGGAGGCACGACAGCGGCCAGCGCCAGCAGCG
CGCTTTGTTCGGGCGGTTTTACATGCTGAAATTCCGAAAATGCCTTTTGC
TGTCGCCGTGCCGCTGCAGCTGGCGGACGCGGTGCCGGGCGTGGCGTTCG
CACGCTCAGCGTGGGTTGTGTTTTTCGGCGGTTTCACATTCTGAAACTAC
AATTCTGCTGTTGCCATGCCGCTGGCGAACTCGATGCCATGCGCAGCATT
TGCACGCTACGCAGCGTGTGTTGTCCGGCAATTTCAGATTCTGAAACTGC
TGTTGTGCTGCTGTGCCGCTGCAGTTGGCGGACGCGGTGCCGGGCGTGGC
AGTCGCACGCTACGCAGCATCTTTGCTTTGGCAGTTTCACATTCTGAAAC
TTAGCAGATTCACATTCTGAAACTGCAATTTGCTGTCGCCTCCTATTGCC
GCTGCAGCTGGCGGACGCGGTGCCGGGCGTCGCCTTTGCGCGCTACGCGG
GCATGGCGGCGCTGCTGTCGGCGCCGCTGGGCGCTGCCGCGTATGCGGCC
ACCATCCACAGGGCCGCTGCACTGCTGCTGGACGTGAGCCTCGCGTTCTG
GCACTTTGGGTGAGTAACGCCGCTTGCAGGAGCAGTGTTTGAGCTTTTGA
CGATACGCCGTGCCTCGCCGAATGGCAACGTTTGGCGACACCCGGCTGTT
GGACCGTGGCCGTAACGTCAAGAATCGTTGACGGACCCTACCATCAACCC
TAGCACAGGGTGGCAGCGCCTGATGTCAGCCACACATTTTGGCACTTGGG
GGAGCCATGGCGCGAGGGTTGAGTAGTTGCAGCAGTTCCTCTACGGACTC
GCGCTTGTGCCCTTAGGCCAGGTTTTCGATCAGCGCTGACCAGCTATTGC
GGCGTTGCCTGGCGCCTCGCTGCTCATCATCATGAGCTGGGCATCTCCTT
CAGGTGCTATGAGCAAGGGTTAGGGTTAGGGTTAGGGTTAGCTGTCGCGC
GTCCGCAGGCGCGGTTTCGGCATTTGCGCACTACATGTCAGGCCGTGTCT
ACTACCACGGTCATTTTCACTGCCATGCCGGATGCTGCGTCGGACGGTGG
GCACTTGGAAAGGACAGAAAGCACACATCGCTCAACTGGCGGCGCTCACG
CGCGGCGCCCTCTCCGCTCGTGGCCTGCGGCAACGCTCAGCACATGCGGC
GCGTGCCTCGGCAATATCGCGTGCAATGTGCGTGCAACGCCGGCAGCCGC
GCTCGCTCTCACTGCCACACCCCCTTTCTTCACAATCAACTGCAAAGAGG
ATGATACCCGCAAGAGTACGCGTGTACAGTGCGGCTGTCATCGGATCATT
GTCACGTGCGCGCTGACGCATGCTCGCTGGTCCCCCCCCCCCCTCCCCCC
CGCAGCGCCTTTGGCGTGGCGTGGCTCGGCAAGCTGTACTTTGCGGGCAG
TGCTCTAGCGGGCGTGCTGGTAACGTGGCGCTGGGGCCTGCTGCGCGAGC
CCGCGGAGGGCGGCGGGTGGCGCGCATTGCTCAATGCGCAGGCGAACGTG
CAGCGCGCCGTTACCGCGGTGGGACTCGCGCTGCTGCTCGCGAGGTGAGG
CGCGCCGCAGCCATGCGCGTCAATGTTTGTACTTGAAGTACATAACATGA
GTAGGTATGGCGTCGCCGCGCTCGGCCTCACGCTGCTGCTCGCGAGGCGA
GTCGCGCAGCAGCGTGCGCTTCAAGCACATGCTTCTACCTCAAATTTGAA
GTACCCAAGTGTATGGGGGTAGGTATGGCGTCACCGCGGTCGGCCTCGCG
CTGCTGCTCGCGAGGTGCGCCGCGCTGTCTGACAGCGTTCCATGTTTCAC
AGTCATCACCGTTCTCTGCGCGCCTCTGCTGCTGATCGGCCGCCCGCGTG
GTCAGTCGCAGACATCGGCAGGCATATATATACATAGATGCATAATACTC
AAGTACATGTGCGCATGTCGCTCTACGGTGCTCACGCGCGCAGCACGACC
GACGTCGAAGCCGCGGCGCAACCGGATGCAGACATCAGCATGCATGCATG
TACATACACACACTCATTCGTATCAGTACTCAAGTATACATGCACATTGC
TCTACTGTGCTTGCGTGCGCAGCACGACCGACGTCGAAGCCGCGGCGGCA
ATCGCTGGGGCCGCGCTGCTGAGGGAGTGGGCGGCGTACATCTGGTGGCG
TGCGCGCGTGTGGTACGACAACATTGGCGTCGCGCCGCACTGCGAGCAGA
TCGGGCATACGGTATGTAGACGTACATGTACTGTACTACTTACCCCATCC
GCCACTTTCAGAACAGTATATTGAGAGCACCAGCTGTCAGAGTGGCGGCT
CCTTGAAAACACACTACATATGTTCAGTTACTCCTACGTAGCTGGATCTG
TGAGCGCGGTGTGCACCTGGTTTTCATTGTGCCCCCTAAGCCTGAACCTA
GCCCTGATTCTGACCCTAGCACCCTTTAGATCACCAGCCACTGCACTGCA
CGCATGTAGCTCGAGAAGCCTCGTCAACATCTGCCTCACCACAAGAGGCG
CTGTGCTCTGTGGCGGTGCAGCTCAAACCTGCAATAGTATGACCAACCAA
GTGTGCTATAAGATGGTGACAATGGTGAAATGGGTTTGCCTCTGTGCTCT
CTCGACTTTGCTGTTGGTTTGTTGTCATTGACGGTGCTCACATCGGGGCA
GTGCTCAAGTTTGTGCTTGTGGATATATGTAAGCTTGGGGCTGGTGACAG
TGTGTGTGAACTGTCACCACATGCCACATCATCCGCACCCCCCCACCCCC
CCGCACCCCCCCCCCAATGACATGACGCCATGTAAATTCGGCGCGCGGCT
TGAGTGCTGCCGTGAATGGCGCTGAACACTGCCATACATGACGGCGAGCG
CCATCTCACAGTGTGCCACCGTGCTGTACGTCTGTCCGCCGCAGGAGTAC
GAGATGCAGGGCAGGTCCTACACGGACGCTCAAATAGCCAAGCTGAGGGC
GTACATCCAGGTAACGACCCAAGCCGCTGCGATGCGCGTTGCTGTAGTGT
GCGCAGAGGATACGCAGCCATTTGCTGCTGCGCGTTTGGGCGCTTTGCGC
TGTGCAGGCTGTCATTATGAGGCAACTAACTATCGGACCCTGAGAAAGCT
GCAGGTACATGCAGCGCGCAAGCTGCAGGTACATGCAGCGCGCATCTGGA
GGACGCCAGCCACAGCATAACCACCTTCCCTGCTGTCGCCAGACACCTCG
CCAAACAGCGTCATTGCTGGCGTATCGCGCTTGAGCAGCGCTTTGTTTTG
GGCTGCTGATTGCGCATCAACATGTCATAGGCGATCCTTTATGAAGCGCA
TCGGGCGTGGCGGCGACACTCAACGTCAGCAAACAATCAGCATCCTGGGT
TACAGCGTGTGGCTCATGTATACTCTGCCCTTGAAAGGTTAGGGGCTAGG
TACACCCCCCCTCATCAACATCTCCCCCGCCCCCGCCCCCTCCCCGTCCA
GAAAAACCCCCTCGCGTACCGCAAGGTGAAGCCCTCAAAGTGGTCGGCGA
TGGACCACTTCAGGCAGGGCTTCCCGCACGTCTCGCGCGGCGGCGGCGAC
GCCTGTGAAGACGACGCGCCGGAACGCGCATGGCGCGTTTCGCAGTAGTT
GGGGGGAGGTGGCTGCTACGGGGGGGACGCACGACGTCAGCCCTCCCTTT
CACGCACCGACAGACGCTTGTTGTAG

Coding sequence (CDS) from alignment at Contig_141:88922..96097+

>mRNA_13359 ID=mRNA_13359|Name=jgi.p|Trimin1|353021|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1638bp|location=Sequence derived from alignment at Contig_141:88922..96097+ (Tribonema minus UTEX_B_3156 )
ATGCGCCCGCTGACCACGCAGCCAGAGGAACAGGGCCTGATCCTGGCTTA
CCTGCAGTCGTGGGCGGTAAACGGGGGGCATCTGGCGGTGGCTAGCGCGC
GGTTGCTCGCTGCCATCGGCAAGACCCTGGCACGGCGGCTGCCGCTGCTC
TGGGACAACGTGGTGTTTGAGGTGGCGGGCCTGCCGGAGGACCTCAGCGC
TCAGCTCGTGCTGTCGCAGGAGCCGTACGCGGCGCAGGCGCTCGCGTGCC
AGGCGCTCAAGGAGGCGGGCCGCTGGCTGGGGCACTGGGCGGTGTACTCA
GATCTGCGGCGGAAGGCGTGTTCCTTCGAGCTGGGACCGGTCCCGGGGCG
CGTTCTCTCGCTGCCGTGCGCGGCGCCGCGGCCCTCGTGGCTGTCCCGCC
TGCTGAGCAGTGGTGCAGGCAGCAGCAGCGGCGGCGACGGCGGCGGCGGC
GCCTGCGCCTGCGCCGGCGGCACGTGCTTCGTGGCGGTGGGTGCGCAGCG
CGCGCCAGAGATTCTGGTGCAGGGGGCGGTGGCGCGGGGGTTGCCGCTGC
AGTGCCAGGCGGTGTCGGAGCCGGTGCTGCGCAGGGTGCGCTTGCCAGGG
CTGCAAGAGTGGGCGCCGGAGGGGCTGCTGCTACCCGTGCGAGTGCTGGC
ATCGCTGGCGGCAGTGCTCATCATGCTGCACGCGGAGGACTGGGCGCCGG
AGGGAGTGCTGCTCCCCGTGCGCGCGCTGGCGTCGCTGGCGGCAGTGCTC
ATCGTGCTGCGCGCGGAGGACGTGGCGGAGAGCCGCGCGTTCCACTTTGT
GCTCTCCGCAGTCGTGGGGTGTGCGATAGCGGCGCTGGTGGTGGGCTACG
TCGCGTTCAATCTCGGGCGCAAGCTGGCGGACGCGGTGCCGGGCGTGGCG
TTCGCACGCTCAGCGTGGTTGGCGGACGCGGTGCCGGGCGTGGCACTGGC
GGACGCGGTGCCGGGCGTCGCCTTTGCGCGCTACGCGGGCATGGCGGCGC
TGCTGTCGGCGCCGCTGGGCGCTGCCGCGTATGCGGCCACCATCCACAGG
GCCGCTGCACTGCTGCTGGACGTGAGCCTCGCGTTCTGGCACTTTGGCGC
CTTTGGCGTGGCGTGGCTCGGCAAGCTGTACTTTGCGGGCAGTGCTCTAG
CGGGCGTGCTGGTAACGTGGCGCTGGGGCCTGCTGCGCGAGCCCGCGGAG
GGCGGCGGGTGGCGCGCATTGCTCAATGCGCAGGCGAACGTGCAGCGCGC
CGTTACCGCGGTGGGACTCGCGCTGCTGCTCGCGAGCACGACCGACGTCG
AAGCCGCGGCGGCAATCGCTGGGGCCGCGCTGCTGAGGGAGTGGGCGGCG
TACATCTGGTGGCGTGCGCGCGTGTGGTACGACAACATTGGCGTCGCGCC
GCACTGCGAGCAGATCGGGCATACGGAGTACGAGATGCAGGGCAGGTCCT
ACACGGACGCTCAAATAGCCAAGCTGAGGGCGTACATCCAGAAAAACCCC
CTCGCGTACCGCAAGGTGAAGCCCTCAAAGTGGTCGGCGATGGACCACTT
CAGGCAGGGCTTCCCGCACGTCTCGCGCGGCGGCGGCGACGCCTGTGAAG
ACGACGCGCCGGAACGCGCATGGCGCGTTTCGCAGTAG