mRNA_13335 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A835ZDA8_9STRA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA8_9STRA) HSP 1 Score: 609 bits (1571), Expect = 3.990e-220 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1 Query: 1 VAMSSSEPEFIDASFVDAVPIEKKVVLIEEDTAPSDVSPVQMSDERPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIKRMK 936 VAMSSSEPEFIDASFVDAVPIEKKVVLIEEDTAPSDVSPVQMSDERPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIKRMK Sbjct: 1 VAMSSSEPEFIDASFVDAVPIEKKVVLIEEDTAPSDVSPVQMSDERPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIKRMK 312
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A6H5L1C5_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C5_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.580e-71 Identity = 131/280 (46.79%), Postives = 177/280 (63.21%), Query Frame = 1 Query: 13 SSEPEFIDASFVDAVPIEKKVVLIEEDTAPSDVSPVQMSDERPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLAN---SGLPLADTVYTQPLSVDEVAFAASRC 843 SS P+ + S VP+ ++ + + D++P E+ P VFVAG +GFVGS++C +L+ G V+ LSR G P W V+ W+ +AL+ D Y++ L D+VVSC+GGFG TD+Y+ LVNG+ IKL EAA +AGV +FVFVSVH+YK P+ V + GYF GKRRAE IGEL+GA G +L+PAFIYG + V T P E+ TV +PL+++G P AKIT+ KR+A+ SGLPLAD +TQPLS EVA +A RC Sbjct: 58 SSSPDAEEES----VPVAQEPAPQPQASGGGDLTPPPGISEQEEAELVGPSKSTVFVAGGSGFVGSEICTQLVAAGCNVIALSRKGA--PANGGSWVKSVK-WVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSVVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKER-TVNIPLQRVGGPLAKITSTGIGKRIASESRSGLPLADVAWTQPLSTAEVAKSAVRC 329
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI) HSP 1 Score: 216 bits (550), Expect = 3.390e-65 Identity = 113/213 (53.05%), Postives = 145/213 (68.08%), Query Frame = 1 Query: 205 GSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRC 843 G V +L+ G V+ LSR G P W V+ W+ +AL+ D Y++ L D+VVSC+GGFG TD+Y+ LVNG+ IKL EAA +AGV +FVFVSVH+YK P+AV + GYF GKRRAE IGEL+GA G +L+PAFIYG + V T P E+ TV +PL+++G P AKIT+ KR+A SGLPLAD +TQPLS EVA +A RC Sbjct: 64 GDAVNTKLVAAGCNVIALSRKGA--PANGGSWVKSVK-WVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKER-TVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRC 272
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A176WHX4_MARPO (NAD(P)-bd_dom domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WHX4_MARPO) HSP 1 Score: 168 bits (426), Expect = 1.810e-46 Identity = 91/221 (41.18%), Postives = 135/221 (61.09%), Query Frame = 1 Query: 172 KVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAA 834 K+ V G +GFVGS++C++ +K+ +V+ LSRSG+ P+ +E W D V W++ D + S L GC +V+S +GGFG T+ + +NGD I +AA +AGVP+F++VSVH+Y LP +GYF GKRRAEA I Y + G +LRP FIYG+++V V +PL+ +G+P KI A + LP +D ++ P+SV +VA AA Sbjct: 88 KILVLGGSGFVGSEICKQAVKRHIEVISLSRSGR--PSYSESWVDKV-VWVSGDVFMTD-WDSVLNGCSAVISTLGGFG-TNEQMEKLNGDANIIAVDAASKAGVPKFIYVSVHDYNLPEFALDSGYFKGKRRAEAEILNKYPSSGTILRPGFIYGKRRVN----------GVDIPLDFVGQPLEKILAATETFTRPFAKLPASDLLFAPPVSVKDVALAA 293
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A7S0MZM9_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZM9_9CHLO) HSP 1 Score: 167 bits (422), Expect = 7.850e-46 Identity = 104/263 (39.54%), Postives = 154/263 (58.56%), Query Frame = 1 Query: 103 SDVSPVQMSDE-RPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVA-RTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAM---NPIKRLANS--GLPLADTVYTQPLSVDEVAFAASRCAAGTATAGV 870 S+ +P+++ + +P+ + P P K+ V G GFVGS+VC+E ++QG VV ++RSG P+ E W D V+ W+ A D S+ L G +V+SCIGGF T + + + GD TI AA AGVPRFVFVSVH+Y +P + ++GYF+GK+RAE + + G VLRP FIYG + V + VT+PL +GEP KI ++ +P+ LA + LP +D + P+SV+ VA A +C + + GV Sbjct: 66 SESTPIEVVESVQPVESAPMP-PAKIVVLGGNGFVGSEVCKEALQQGMTVVSINRSGP--PSINEPWVDRVD-WVNADVFDESSWSYTLPGAAAVISCIGGFATTAADMERICGDATIAGVGAAVAAGVPRFVFVSVHDYNIPDFLKDQSGYFSGKKRAEDAVLLQFPEGGAVLRPGFIYGSRLVP--------QLGVTVPLNLVGEPVQKILSLADQSPLGALAEALKPLPASDVLLAPPVSVESVAATALKCISDPSMVGV 316
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: I1L506_SOYBN (NAD(P)-bd_dom domain-containing protein n=7 Tax=NPAAA clade TaxID=2231382 RepID=I1L506_SOYBN) HSP 1 Score: 160 bits (404), Expect = 2.070e-43 Identity = 90/222 (40.54%), Postives = 134/222 (60.36%), Query Frame = 1 Query: 172 KVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLAN--SGLPLADTVYTQPLSVDEVAFA 831 ++ V G GFVGS +C+ + +G +V+ LSRSG+ PT ++ W D V WI+ V+ + L G +VVS +GGFG+ + + +NG+ + AAKE G+P+F+ +SVH+Y LP+ + +GYF GKR+AE+ + Y G VLRPAFIYG+++V YE LPL+ +GEPA KI + I+ S LP +D + P+SVD+VA A Sbjct: 71 RIVVLGGNGFVGSAICKAAVSRGIEVISLSRSGR--PTYSDAWVDQV-TWISGDVFYVN-WDEVLVGATAVVSTLGGFGS-EEQMKRINGEANVVAVNAAKEYGIPKFILISVHDYNLPSFLLSSGYFTGKRKAESEVLSKYPNSGIVLRPAFIYGKRRVN-----GYE-----LPLDLVGEPAEKI--LRAIENFTKPLSSLPASDLLLAPPVSVDDVALA 275
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A834ST22_9FABA (NADH dehydrogenase n=2 Tax=Caesalpinioideae TaxID=3804 RepID=A0A834ST22_9FABA) HSP 1 Score: 159 bits (403), Expect = 2.500e-43 Identity = 98/257 (38.13%), Postives = 145/257 (56.42%), Query Frame = 1 Query: 172 KVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLAN-----SGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGVTVRLPSETGANVLTVDDIK 927 +V V G +GFVGS +C+ I +G +V+ LSRSG+ PT + W D V WI+ V+ + L G +VVS +GGFG+ + + +NG+ + AAKE G+P+F+ +SVH+Y LP + +GYF GKR+AE+ + Y G VLRPAFIYG+++V +E LPL+ +GEPA +I +K + N S LP +D + P+SVD+VAFA V + + +LT+D IK Sbjct: 65 RVVVLGGSGFVGSAICKAAISKGIEVISLSRSGR--PTYTDPWVDQV-TWISGDVFYVN-WDEVLVGATAVVSTLGGFGS-EEQMKRINGEANVVAVNAAKEYGIPKFILISVHDYNLPPFLLSSGYFTGKRKAESEVLSKYPNSGVVLRPAFIYGKRRVD-----GFE-----LPLDLVGEPAERI-----LKAVENFTKPLSSLPASDLLLAPPVSVDDVAFA------------VVNAITDDDEFGILTIDQIK 289
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A1Y1IPQ3_KLENI (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IPQ3_KLENI) HSP 1 Score: 160 bits (406), Expect = 4.020e-43 Identity = 97/235 (41.28%), Postives = 137/235 (58.30%), Query Frame = 1 Query: 172 KVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVART-GYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRL-ANSGLPLADTVYTQPLSVDEVAFAASRCAAGTATAGV 870 K+ V G GFVGS V + I++G +V ++RSG+ PT AE W + + WI A D +S G +V+SC+GGFG T+ + + GD T++ EAAK AGVPRF+FVSVH+Y LP+ V + GYF GK++AEARI ELY G +LRP FIYG ++V N V++PL +G K ++ P A +P +D + P+ V++VA AA +T GV Sbjct: 121 KLIVLGGNGFVGSHVVRAAIEKGYEVTSINRSGR--PTVAEAWVYNAQ-WITADVFSAD-LESYFAGASAVMSCLGGFG-TNEQMERICGDATVRAAEAAKNAGVPRFIFVSVHDYNLPSGVKDSIGYFVGKKKAEARIAELYPGSGVILRPGFIYGSRRVPQAN-------NVSIPLTPVGAAVEKSLSILPDALTDALCRIPGSDVLIAPPVDVEDVARAAVEAVRDESTPGV 343
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A022RXK8_ERYGU (NAD(P)-bd_dom domain-containing protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RXK8_ERYGU) HSP 1 Score: 159 bits (401), Expect = 6.890e-43 Identity = 90/222 (40.54%), Postives = 135/222 (60.81%), Query Frame = 1 Query: 172 KVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAK-ITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAA 834 ++ V G +GFVGS +C+ + +G +V+ LSRSG+ P+ +E W D V W+ ++ L G +VVS IGGFG+ + + +NG+ + +AKE G+P+F+ +SVH+Y LP+ + TGYF GKR+AEA + Y G VLRP FIYG++K+ YE +PLE IGEP K ++A+ + N+ LP +D V PLSV+++AFAA Sbjct: 78 QIVVLGGSGFVGSAICKAAVSKGIEVISLSRSGR--PSYSEPWVDQVN-WVTGDVF-YANWDEVLVGATAVVSTIGGFGS-EEQMQRINGEANVVAIHSAKEYGIPKFILISVHDYNLPSFMLSTGYFTGKRKAEAELLSKYPNSGVVLRPGFIYGKRKID-----GYE-----IPLELIGEPLEKFLSAVQNFTKPLNT-LPASDLVLAPPLSVNDLAFAA 283
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Match: A0A1D1ZIT8_9ARAE (Uncharacterized protein At1g32220, chloroplastic (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZIT8_9ARAE) HSP 1 Score: 159 bits (403), Expect = 9.450e-43 Identity = 94/224 (41.96%), Postives = 134/224 (59.82%), Query Frame = 1 Query: 166 TGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKI--TAMNPIKRLANSGLPLADTVYTQPLSVDEVAFA 831 T ++ V G +GFVGS +C+ + +G +VV +SRSG+ P+ W D V WIA + S+ L G +VVS +GGFG+ + + +NG+ + +AAK+ GVP+F+ +SVH+Y LPT + +GYF GKR+AE+ + Y G VLRPAFIYG +KV N F +PL IGEP +I N IK L + LP +D + P+SVD+VAFA Sbjct: 117 TERIVVLGGSGFVGSAICKAAVSKGIEVVSVSRSGR--PSYTGSWVDQV-TWIAGDVFYM-SWNEVLLGATAVVSTLGGFGS-EEQMKKINGEANVLAVDAAKDFGVPKFILISVHDYNLPTFLLSSGYFTGKRKAESEVLSKYPNSGVVLRPAFIYGNRKV---NGFE-------IPLNLIGEPLERILNATQNFIKPLGS--LPASDLLLAPPVSVDDVAFA 323 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136857 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13335 ID=mRNA_13335|Name=jgi.p|Trimin1|136857|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=936bp|location=Sequence derived from alignment at Contig_166:282495..286565- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GTCGCCATGTCCTCCTCAGAACCGGAGTTTATTGACGCTTCTTTCGTAGAback to top protein sequence of jgi.p|Trimin1|136857 >Trimin1|136857|gw1.166.38.1 ID=Trimin1|136857|gw1.166.38.1|Name=jgi.p|Trimin1|136857|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=312bp VAMSSSEPEFIDASFVDAVPIEKKVVLIEEDTAPSDVSPVQMSDERPIVTback to top mRNA from alignment at Contig_166:282495..286565- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13335 ID=mRNA_13335|Name=jgi.p|Trimin1|136857|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4071bp|location=Sequence derived from alignment at Contig_166:282495..286565- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_166:282495..286565- >mRNA_13335 ID=mRNA_13335|Name=jgi.p|Trimin1|136857|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=936bp|location=Sequence derived from alignment at Contig_166:282495..286565- (Tribonema minus UTEX_B_3156 )back to top |