mRNA_13329 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178186
Unique NamemRNA_13329
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A835Z832_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z832_9STRA)

HSP 1 Score: 574 bits (1479), Expect = 4.620e-207
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 
Query:    1 MADGEQHGKLADADGEPTKCHVEGNPAQCSSRLVYSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITVRPAAQVHAVARKKRKLHNLVQQSLGLLDE 849
            MADGEQHGKLADADGEPTKCHVEGNPAQCSSRLVYSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITVRPAAQVHAVARKKRKLHNLVQQSLGLLDE
Sbjct:    1 MADGEQHGKLADADGEPTKCHVEGNPAQCSSRLVYSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITVRPAAQVHAVARKKRKLHNLVQQSLGLLDE 283
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BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A6H5KGP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP7_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.390e-49
Identity = 101/202 (50.00%), Postives = 123/202 (60.89%), Query Frame = 1 
Query:  160 MPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPH-MAEGGIITGYMARPVDLEVAGVDVQ-ISTCAVHVPDNCPYFPYDQACVALIT 759
            MPY G NT+VMMEWEK YM+ALV AL +   S VLEIG+G GYSA+ IQ   P+ H IIE    VL R   WAA + G R+V+GFWQ  LA+  +     FD VFFDDFPLP            PDS+     PA SRW  F++ C  H +  GG ITGY+ARP+ LE +G  +  +    V VP NCPYFPY +A + LIT
Sbjct:    1 MPYKGENTIVMMEWEKPYMRALVDALAITEESRVLEIGYGIGYSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGE-----FDAVFFDDFPLPDT----------PDSSDLRG-PA-SRWHAFIDLCAAHHLPVGGRITGYLARPLPLERSGCVLSPLVAFPVDVPKNCPYFPYGEAYIPLIT 185
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A484EDW6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDW6_BRELC)

HSP 1 Score: 162 bits (410), Expect = 1.680e-44
Identity = 90/228 (39.47%), Postives = 128/228 (56.14%), Query Frame = 1 
Query:  139 LDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITVR-PAAQVHAVARKKRKLHNL 819
            LD     + +  S   VMM+WEK YM+  V+AL ++ +  VLEIG+G  YS + IQ  +P+ H IIEC  + L+R   +AA+ +G  ++ G WQ +L + DK     FD VFFDD+PLP      +SA       +T     +SRW DF++  L H  +G  I+GY+AR +DLE  G  V++S   V VP++C YFPY  A V +ITV  P A       +    H+L
Sbjct:   10 LDALGQEVLWSSSGQQVMMQWEKRYMETCVEALAIQPTDRVLEIGFGLAYSGSCIQRFRPRSHTIIECDRETLERTRKFAAKYNGVEVMAGTWQCILPTLDK-----FDCVFFDDYPLPELQQKKTSAN------VTAVPRQQSRWHDFLDVALKHCQDGARISGYLARSLDLERPGCSVKVSRVQVDVPEHCNYFPYKTALVPVITVMDPLAAARLPIAETGSFHSL 226
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: K3WRU9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRU9_GLOUD)

HSP 1 Score: 157 bits (397), Expect = 2.440e-43
Identity = 87/192 (45.31%), Postives = 112/192 (58.33%), Query Frame = 1 
Query:  187 VMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            VMM+WE++YM   V ALR+  S  VLEIG+G  YSA  IQ  +P  H IIEC   V+Q A  +A    G R+ +G WQ +L    +    +FD VFFDD+PLP  +    +         T S   RSRW DF++A LPH+A GG ITGY+AR +DL+  G  V+ S   V V D C YFP+  A V +ITV
Sbjct:   26 VMMQWEQQYMHTCVDALRIRRSDRVLEIGFGLAYSATHIQRFRPLLHTIIECDAAVIQDAETFARSHEGVRVKRGTWQSLLPMLSESD--QFDCVFFDDYPLPELEELGIT------QNQTRSLRTRSRWHDFLDAVLPHVAVGGRITGYLARDIDLQRVGCRVETSAVDVKVSDTCEYFPHKTALVPVITV 209
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: W2WDM9_PHYPR (Uncharacterized protein (Fragment) n=9 Tax=Phytophthora TaxID=4783 RepID=W2WDM9_PHYPR)

HSP 1 Score: 158 bits (400), Expect = 8.120e-43
Identity = 90/213 (42.25%), Postives = 119/213 (55.87%), Query Frame = 1 
Query:  139 LDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLP-----AADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            LD     + +      VMM+WEK+YM+  V AL ++ +  VLEIG+G  YSA  IQ  +P+ H IIEC  + LQRA  +A   SG ++  G WQ VL + ++     FD VFFDD+PLP      ADGAAS                RSRW DF++  L H   G  I+GY+AR +DL+  G  V IS   V VP++C YFP+  A V +ITV
Sbjct:   12 LDELGHEVLWSSRGQQVMMQWEKQYMERCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRSHTIIECDQETLQRARRFATSHSGVKIAAGTWQQVLPTLNQ-----FDCVFFDDYPLPELEVGGADGAASRQ--------------RSRWHDFLDVALKHCTTGARISGYLARKLDLQRPGCQVTISIVQVDVPEHCNYFPHKTALVPVITV 205
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: G5AFM1_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AFM1_PHYSP)

HSP 1 Score: 154 bits (388), Expect = 1.580e-42
Identity = 88/221 (39.82%), Postives = 122/221 (55.20%), Query Frame = 1 
Query:  100 VYSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            V+  D+ G+E+L          +      VMM+WEK+YM+  V AL ++ S  VLEIG+G  YSA+ IQ  +P+ H IIEC  + LQRA  +AA  +G  +V G WQ  L + ++     FD VFFDD+PLP  +          D         RSRW DF++  L H A G  ++GY+AR +DL+ +G  V +S   V V  NC YFP+  A V +ITV
Sbjct:    7 VHGLDELGQEVL----------WSSRGQQVMMQWEKKYMELCVDALAIQPSDRVLEIGFGLAYSASRIQTFRPRSHTIIECDRETLQRARLFAAAHTGVEIVAGTWQQQLPTLNQ-----FDCVFFDDYPLPELESGEFPTREGGDGGR------RSRWHDFLDVALKHCANGARVSGYLAREMDLQRSGCCVAVSEVLVGVSANCNYFPHKTALVPVITV 206
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A3M6VQ81_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ81_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.720e-42
Identity = 89/217 (41.01%), Postives = 129/217 (59.45%), Query Frame = 1 
Query:  112 DDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            D+ G+EIL+  ++ G          VMM+WEK+YM+  V AL ++ +  VLEIG+G  YS++ IQ+ +PQ H IIEC  + LQRA  +A R  G +++ G WQ+VL + D+     FD VFFDD+PLP  +     A+    S        RSRW +F++  L H A G  I+GY+AR +DL+  G  + +S   V VP++C YFP+  A + LITV
Sbjct:   11 DEVGQEILL--SSRGQQ--------VMMQWEKQYMELCVDALGIQLTDRVLEIGFGLAYSSSCIQSFRPQSHTIIECDQETLQRAQKFAGRYKGVQIMSGTWQNVLPTLDQ-----FDCVFFDDYPLPELEAENLFASGKGFSRR------RSRWHEFLDVVLSHCATGARISGYLARELDLQRPGCQLFVSKVQVDVPEHCNYFPHKTALIPLITV 206
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A329T1W0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1W0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 9.000e-42
Identity = 90/217 (41.47%), Postives = 122/217 (56.22%), Query Frame = 1 
Query:  112 DDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            D+ G+E+L          +      VMM+WEK+YM+  V AL ++ +  VLEIG+G  YSA  IQ  +P+ HVIIEC  + LQRA  +A   SG  +V G W+  L + D+     FD VFFDD+PLP  +      +   D AL      RSRW DF++  + H   G  ITGY+AR +DL+  G  V +S   V VP++C YFP+  A V LITV
Sbjct:   11 DELGQEVL----------WSSRGQQVMMQWEKQYMEVCVDALAIQPTDRVLEIGFGLAYSATHIQRFRPRNHVIIECDRETLQRARQFAVNHSGVAIVSGTWKRQLPTLDQ-----FDCVFFDDYPLPELEKGNPLTS---DGALGRQ---RSRWHDFLDIAVKHCTTGARITGYLARQLDLQRPGCQVSVSRVQVDVPEHCNYFPHKTALVPLITV 206
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A6A3L5H5_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5H5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.390e-41
Identity = 86/221 (38.91%), Postives = 122/221 (55.20%), Query Frame = 1 
Query:  100 VYSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            V+  D+ G+E+L          +      VMM+WEK+YM+  V AL ++ S  VLEIG+G  YSA+ IQ  +P+ H +IEC  + LQRA  +AA   G  +V G WQ  L +  +     FD +FFDD+PLP  +      +             RSRW +F++  L H A G  ++GY+AR VDL+  G  V ++T  V VP+NC YFP+  A V +ITV
Sbjct:    8 VHGLDELGQEVL----------WSSRGQQVMMQWEKQYMELCVDALAIQPSDRVLEIGFGLAYSASHIQTFRPRSHTVIECDRETLQRAQQFAAAHRGVEIVAGTWQQQLQTLGQ-----FDCIFFDDYPLPELESGHLPTSEGVGGGR------RSRWHEFLDVALEHCANGARVSGYLAREVDLQRPGCRVAVTTVQVGVPENCNYFPHKAALVPVITV 207
[Close]
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Match: A0A8K1CTQ8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTQ8_PYTOL)

HSP 1 Score: 153 bits (386), Expect = 2.380e-41
Identity = 90/223 (40.36%), Postives = 117/223 (52.47%), Query Frame = 1 
Query:  103 YSTDDKGKEILVLDTANGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANAIQAHKPQQHVIIECSDDVLQRAVPWAARQSGAR---MVQGFWQDVLASQDKLSNVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACLPHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVALITV 762
            Y  D+ GK I+          +      VMMEWEK YM+A V AL V ++  VLEIG+G  YSA  IQ ++P  H IIEC    +Q+A  +A      R   +VQG WQ +L +        FD VFFDD+PLP  +   +             T  RSRW DF++  LPH  +G  ITGY+AR V L  AG DV +    V  P NC Y+P++ A V +ITV
Sbjct:    8 YGRDEHGKAIV----------WSSQGQQVMMEWEKAYMEACVDALGVRSTDRVLEIGFGLAYSATQIQTYRPASHTIIECDQAGIQQAQAFAEANGQEREVVVVQGTWQAMLPTLGT-----FDCVFFDDYPLPELEETTT---------XXXQTQGRSRWHDFLDVVLPHCVQGARITGYLARDVGLTRAGCDVHVRDFVVDAPANCTYYPHEHALVPVITV 206
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178186 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z832_9STRA4.620e-207100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KGP7_9PHAE1.390e-4950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A484EDW6_BRELC1.680e-4439.47Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
K3WRU9_GLOUD2.440e-4345.31Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W2WDM9_PHYPR8.120e-4342.25Uncharacterized protein (Fragment) n=9 Tax=Phytoph... [more]
G5AFM1_PHYSP1.580e-4239.82Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A3M6VQ81_9STRA1.720e-4241.01Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A329T1W0_9STRA9.000e-4241.47Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3L5H5_9STRA1.390e-4138.91Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A8K1CTQ8_PYTOL2.380e-4140.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:255518..256621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178186|e_gw1.166.27.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00003,RC00614
KEGG ReactionR01883
KEGG ModuleM00047
KEGG Pathwayko00260,ko00330,ko01100,map00260,map00330,map01100
KEGG koko:K00542
EC2.1.1.2
Descriptionprotein-arginine N5-methyltransferase activity
COG categoryE
Max annot lvl4776|Peronosporales
EggNOG OGsKOG1709@1|root,KOG1709@2759|Eukaryota,3QG2J@4776|Peronosporales
Evalue1.87e-43
Seed ortholog4792.ETI38560
Hectar predicted targeting categoryother localisation
TranscriptId178508
TrackFilteredModels1
ProteinId178186
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178186gene_13329Tribonema minus UTEX_B_3156 geneContig_166 255518..256621 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13329_1exon_13329_1Tribonema minus UTEX_B_3156 exonContig_166 255518..255708 +
exon_13329_2exon_13329_2Tribonema minus UTEX_B_3156 exonContig_166 255961..256621 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13329CDS_13329Tribonema minus UTEX_B_3156 CDSContig_166 255518..255708 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178186Trimin1|178186|e_gw1.166.27.1Tribonema minus UTEX_B_3156 polypeptideContig_166 255518..256621 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13329 ID=mRNA_13329|Name=jgi.p|Trimin1|178186|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=852bp|location=Sequence derived from alignment at Contig_166:255518..256621+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGATGGAGAGCAACATGGAAAGCTTGCGGACGCGGATGGCGAGCC
GACTAAGTGTCATGTTGAGGGGAATCCTGCTCAGTGCAGCTCGCGACTGG
TGTACAGCACAGACGACAAAGGCAAAGAGATACTTGTGCTGGACACCGCA
AACGGCAGCATGCCGTACATGGGAAGCAACACCGTAGTCATGATGGAATG
GGAGAAGGAGTACATGCAGGCTCTGGTGCAGGCGTTGCGCGTGGAGACAA
GCAGCAATGTGCTGGAGATAGGGTGGGGCTGCGGGTACAGCGCAAATGCC
ATTCAGGCACACAAGCCCCAGCAACACGTGATCATCGAATGCTCTGACGA
TGTGCTGCAGCGAGCAGTGCCGTGGGCTGCCAGGCAAAGCGGTGCCAGGA
TGGTGCAGGGATTCTGGCAAGATGTGCTTGCGTCGCAGGACAAGCTGAGC
AATGTGAAGTTCGATCGCGTGTTCTTCGACGACTTCCCTCTACCAGCCGC
TGATGGTGCGGCGAGCAGTGCCGCTGCAGCACCTGATTCTGCCTTAACAG
AGTCAACGCCCGCGCGAAGCAGATGGTGCGATTTTGTAGAAGCGTGTTTG
CCACACATGGCCGAGGGCGGCATCATCACTGGCTATATGGCAAGGCCGGT
TGACCTGGAAGTTGCTGGTGTGGATGTACAAATTAGCACATGCGCAGTCC
ACGTGCCCGACAACTGCCCGTACTTCCCATACGACCAGGCATGCGTTGCA
TTAATCACAGTCAGGCCAGCAGCACAAGTACACGCTGTAGCGCGGAAAAA
ACGAAAGCTTCACAATCTGGTGCAGCAATCGCTGGGCTTACTGGATGAAT
AG
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protein sequence of jgi.p|Trimin1|178186

>Trimin1|178186|e_gw1.166.27.1 ID=Trimin1|178186|e_gw1.166.27.1|Name=jgi.p|Trimin1|178186|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=284bp
MADGEQHGKLADADGEPTKCHVEGNPAQCSSRLVYSTDDKGKEILVLDTA
NGSMPYMGSNTVVMMEWEKEYMQALVQALRVETSSNVLEIGWGCGYSANA
IQAHKPQQHVIIECSDDVLQRAVPWAARQSGARMVQGFWQDVLASQDKLS
NVKFDRVFFDDFPLPAADGAASSAAAAPDSALTESTPARSRWCDFVEACL
PHMAEGGIITGYMARPVDLEVAGVDVQISTCAVHVPDNCPYFPYDQACVA
LITVRPAAQVHAVARKKRKLHNLVQQSLGLLDE*
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mRNA from alignment at Contig_166:255518..256621+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13329 ID=mRNA_13329|Name=jgi.p|Trimin1|178186|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1104bp|location=Sequence derived from alignment at Contig_166:255518..256621+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATGGAGAGCAACATGGAAAGCTTGCGGACGCGGATGGCGAGCC
GACTAAGTGTCATGTTGAGGGGAATCCTGCTCAGTGCAGCTCGCGACTGG
TGTACAGCACAGACGACAAAGGCAAAGAGATACTTGTGCTGGACACCGCA
AACGGCAGCATGCCGTACATGGGAAGCAACACCGTAGTCATGTGAGTTCC
GGGAACCAGCATTGCCTTGCGCTGTACAGATGTGCTCTTCCTGCAGCACA
TTGCTGGCTTGCATGCTTCTGTTTCAAACTTGCAGGCAGTGCCTGTCATT
GATTGTAAACGTTGCGGCACGGTCAGCGTCATCTACACTCATGTTTTACA
GGAAGTGGGCAGAGAGCCGCAACATCCGCACCTGCATAGTTGCCCTCTGT
GACTGCCATGCCTTCGACGCCTCTTGACGCATGCTCCCCGCAGGATGGAA
TGGGAGAAGGAGTACATGCAGGCTCTGGTGCAGGCGTTGCGCGTGGAGAC
AAGCAGCAATGTGCTGGAGATAGGGTGGGGCTGCGGGTACAGCGCAAATG
CCATTCAGGCACACAAGCCCCAGCAACACGTGATCATCGAATGCTCTGAC
GATGTGCTGCAGCGAGCAGTGCCGTGGGCTGCCAGGCAAAGCGGTGCCAG
GATGGTGCAGGGATTCTGGCAAGATGTGCTTGCGTCGCAGGACAAGCTGA
GCAATGTGAAGTTCGATCGCGTGTTCTTCGACGACTTCCCTCTACCAGCC
GCTGATGGTGCGGCGAGCAGTGCCGCTGCAGCACCTGATTCTGCCTTAAC
AGAGTCAACGCCCGCGCGAAGCAGATGGTGCGATTTTGTAGAAGCGTGTT
TGCCACACATGGCCGAGGGCGGCATCATCACTGGCTATATGGCAAGGCCG
GTTGACCTGGAAGTTGCTGGTGTGGATGTACAAATTAGCACATGCGCAGT
CCACGTGCCCGACAACTGCCCGTACTTCCCATACGACCAGGCATGCGTTG
CATTAATCACAGTCAGGCCAGCAGCACAAGTACACGCTGTAGCGCGGAAA
AAACGAAAGCTTCACAATCTGGTGCAGCAATCGCTGGGCTTACTGGATGA
ATAG
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Coding sequence (CDS) from alignment at Contig_166:255518..256621+

>mRNA_13329 ID=mRNA_13329|Name=jgi.p|Trimin1|178186|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=852bp|location=Sequence derived from alignment at Contig_166:255518..256621+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATGGAGAGCAACATGGAAAGCTTGCGGACGCGGATGGCGAGCC
GACTAAGTGTCATGTTGAGGGGAATCCTGCTCAGTGCAGCTCGCGACTGG
TGTACAGCACAGACGACAAAGGCAAAGAGATACTTGTGCTGGACACCGCA
AACGGCAGCATGCCGTACATGGGAAGCAACACCGTAGTCATGATGGAATG
GGAGAAGGAGTACATGCAGGCTCTGGTGCAGGCGTTGCGCGTGGAGACAA
GCAGCAATGTGCTGGAGATAGGGTGGGGCTGCGGGTACAGCGCAAATGCC
ATTCAGGCACACAAGCCCCAGCAACACGTGATCATCGAATGCTCTGACGA
TGTGCTGCAGCGAGCAGTGCCGTGGGCTGCCAGGCAAAGCGGTGCCAGGA
TGGTGCAGGGATTCTGGCAAGATGTGCTTGCGTCGCAGGACAAGCTGAGC
AATGTGAAGTTCGATCGCGTGTTCTTCGACGACTTCCCTCTACCAGCCGC
TGATGGTGCGGCGAGCAGTGCCGCTGCAGCACCTGATTCTGCCTTAACAG
AGTCAACGCCCGCGCGAAGCAGATGGTGCGATTTTGTAGAAGCGTGTTTG
CCACACATGGCCGAGGGCGGCATCATCACTGGCTATATGGCAAGGCCGGT
TGACCTGGAAGTTGCTGGTGTGGATGTACAAATTAGCACATGCGCAGTCC
ACGTGCCCGACAACTGCCCGTACTTCCCATACGACCAGGCATGCGTTGCA
TTAATCACAGTCAGGCCAGCAGCACAAGTACACGCTGTAGCGCGGAAAAA
ACGAAAGCTTCACAATCTGGTGCAGCAATCGCTGGGCTTACTGGATGAAT
AG
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