mRNA_13324 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178138
Unique NamemRNA_13324
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A836CK28_9STRA (Pept_C1 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK28_9STRA)

HSP 1 Score: 682 bits (1760), Expect = 1.900e-248
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 1
Query:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP
Sbjct:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 326          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2BCN1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCN1_9STRA)

HSP 1 Score: 361 bits (926), Expect = 3.170e-119
Identity = 166/288 (57.64%), Postives = 205/288 (71.18%), Query Frame = 1
Query:  157 KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE--TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            K  G   S  + GW++ +DCAAC +YP   NYT+ N+P  FDWRA  +  T V +Q YCGSCWSFSTA DIEGK + ATG+ V LS+QQLVACD K     GC+GG PY AMQY++  GG+++E  YPYK +CAWG CG+   GTPTCD+D +  ++K   V+ IGGWQMVA+G  YEDL+  A+VKNGPISI LNA GM+YY             AGAID   PCEPT LDHAVL+VG+G +D + YW++KNSWG  WGE GYYR+V+G NHCG+ANFA+TSVIK P
Sbjct:  202 KFDGSKFSSDEVGWVSVQDCAACALYPHFSNYTMGNLPDSFDWRAIGDVVTDVKNQKYCGSCWSFSTAQDIEGKHYFATGERVRLSEQQLVACDTKD---WGCDGGYPYRAMQYISQVGGMLHEASYPYKGICAWGACGNEEAGTPTCDSDTLNTNIKSGNVSAIGGWQMVAMGEDYEDLMRVALVKNGPISISLNANGMDYYVHGVVGCSNDDCNAGAIDVHTPCEPTALDHAVLLVGYGTEDDIPYWLIKNSWGDLWGEDGYYRLVRGSNHCGVANFAITSVIKAP 486          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: F0Y246_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y246_AURAN)

HSP 1 Score: 326 bits (835), Expect = 1.220e-107
Identity = 167/328 (50.91%), Postives = 217/328 (66.16%), Query Frame = 1
Query:    1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAP--KGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFG-EQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            R  ++ ++ +  R +  D E  RRFA F+ NLA ID LN ANP A+F GI+S     +  +    W++  DCAAC  +P  G+Y + N+P +FDWRA    T V +Q YCGSCWSFS+AGDIEG  FLA   ++ LS QQLV+C+       GC+GG P+AAM+YV+  GGLV  +DYPYK +C    CG      GTPTCD + + G L    VA I G+Q VA+GA+YEDL+  A+VKNGP+S+  NA GME+Y AG +D   PC+PT LDHAVL+VG+G E   V YW++KNSW + WGEGGYYR+V+G N CG+AN  V SV K
Sbjct:    7 RDLYEQFKRRERRDF-DDAEDARRFAIFRRNLATIDTLNAANPAAVF-GITSFCDRTDEERQSVAWVSASDCAACDRFPHFGDYDMGNLPDDFDWRALGAVTAVKNQKYCGSCWSFSSAGDIEGTMFLAGDDLISLSTQQLVSCNTYNY---GCDGGWPFAAMEYVSHFGGLVPMDDYPYKGICMDNMCGGTEIFTGTPTCDKELLNGHLAAGDVAAIEGYQFVAMGAEYEDLMHVALVKNGPLSLAFNANGMEFY-AGGVDHHFPCDPTALDHAVLLVGYGTETFDVPYWLIKNSWDTEWGEGGYYRLVRGVNACGVANMVVHSVHK 328          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2W4U9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U9_9STRA)

HSP 1 Score: 320 bits (820), Expect = 5.200e-103
Identity = 158/294 (53.74%), Postives = 198/294 (67.35%), Query Frame = 1
Query:  133 ALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY-------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            A+F+ +SSK    N+S     W++  DCAAC  +     YT  N+P  FDWR     T V +Q YCGSCW+FSTA D+EG  FLATG++  LS+QQLVAC+    A  GC+GG PY AMQY+   GGLV ++ Y YK +CAWG CG+   GTPTC T+ +   L+   VA IGG+Q+V+LGA+YE LL  A+VKNGPISI  NA GM+YY              AGAID   PC+P+ LDHAVL+VG+G + GV YWV+KNSWG  WGE GYYR+V+G NHCG+ANFAV SV+K
Sbjct:  214 AVFDALSSK----NMSFGMVPWVSASDCAACKRFEHFSLYTWDNLPENFDWRELGAVTDVKNQKYCGSCWTFSTAADLEGTHFLATGELESLSEQQLVACN---TADWGCDGGYPYRAMQYIHKFGGLVTDDAYGYKGICAWGDCGTPVAGTPTCHTEILNAELESKRVASIGGYQLVSLGAEYEALLRLALVKNGPISIAFNANGMDYYLHGVVGCSAENYCDAGAIDHHTPCDPSYLDHAVLIVGYGVEAGVPYWVIKNSWGDAWGEDGYYRIVRGSNHCGVANFAVHSVVK 500          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2BRB8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRB8_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.770e-91
Identity = 146/287 (50.87%), Postives = 179/287 (62.37%), Query Frame = 1
Query:  175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD---SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYK----------------AGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKD 975
            IS  Q  W   + CAAC  YP    YT  N P  FDWR     T V +Q YCGSCW+FSTA D+EG  FLAT +++ LS+QQ+VACD   ++ +GC GG  YAAMQYV  TGGLV  +D PYK V           GTPTCDT+ +   LK    S   H  G+Q VA+G  YED +AT ++KNGP+S+ +NA GMEYY+                AG+I TT PC+PT+LDH VL V +G QDG +YWV+KNSWGS WGE GYYR  +G NHCG+AN  V SV K+
Sbjct:   12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAADVEGTHFLATDELISLSEQQIVACD---SSMDGCEGGYMYAAMQYVEKTGGLVSYDDMPYKGVFM-----DYMLGTPTCDTEAINSVLKSDDLSKFGHSEGFQFVAMGPDYEDRMATILLKNGPLSVGINANGMEYYEFGITGCETIAGSTYCEAGSISTTTPCDPTSLDHGVLAVAYGVQDGTDYWVIKNSWGSEWGEDGYYRQTRGDNHCGVANMVVHSVYKN 290          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2DDK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDK6_9STRA)

HSP 1 Score: 283 bits (723), Expect = 6.860e-91
Identity = 141/278 (50.72%), Postives = 179/278 (64.39%), Query Frame = 1
Query:  139 FEGISS--KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETP-VSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCG-SAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDG----VEYWVVKNSWGSWWGEGGYYR 912
            + G+ S  K  G  + KSQ GWI   DCAAC +YP   +Y ++NMPT FDWRA      + +Q YCGSCW+FST  D+EGK FLATG++   S+QQL+ACDQ R    GC+GG   AAMQY+   GGLV EE YPYK +CAW  C  +    TPTC+T  +   LK  +VAHIG WQMVA+G+ +E+ +  +M+KNGPISI +NA  M++Y            +AG ID    C+PT LDHAVL VG+G  DG    V YW++KNSWG  WGE GY+R
Sbjct:   39 YTGLDSDDKYTGRQMEKSQVGWIDPADCAACNLYPNFSHYDMSNMPTGFDWRAYGAVSHIRNQKYCGSCWTFSTVADVEGKHFLATGELKNFSEQQLIACDQGR-INWGCDGGYQQAAMQYLVDVGGLVEEEVYPYKGICAWDACDQNISYSTPTCNTTLLNQELKSMSVAHIGSWQMVAMGSDWEEPMVLSMLKNGPISISINAHAMDFYIHGIVGCNHKYCEAGKIDHKKNCDPTELDHAVLAVGYGTSDGTSDGVPYWIIKNSWGKDWGEDGYWR 315          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: F0Y300_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y300_AURAN)

HSP 1 Score: 285 bits (730), Expect = 1.350e-90
Identity = 154/341 (45.16%), Postives = 201/341 (58.94%), Query Frame = 1
Query:   10 FDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALF-----------EGISSKVKGPNISK-SQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDT--TLPCEPTTLDHAVLVVGFGEQ--DG---VEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            FD +  +++++Y +  E   RF  F  NL  IDALN  NP ALF           E    ++  P+I+  ++ GW +  DCAAC +YP  G Y + N+P +FDWR     T V +Q YCGSCWSFSTA D+EG  +LATG +   + QQLV C+       GC+GG P+AAMQY++  GG+V  E  PYK +                  + +   L+D  VAHI GWQMVA+GA YE L+   +VKNGP+SI  NA GM+YY  G         C+PT+LDHAVLVVG+G Q  DG   V YWV+KNSW   WGE GYYR+V+G N CG+AN  V S++K
Sbjct:   89 FDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFADQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAVTRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNTMNL---GCDGGYPFAAMQYLSHFGGMVTWETMPYKKI------------------ELLNEKLEDGDVAHISGWQMVAMGADYESLMRVTLVKNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIVK 408          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S3K4M5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M5_9STRA)

HSP 1 Score: 282 bits (721), Expect = 4.210e-88
Identity = 140/294 (47.62%), Postives = 182/294 (61.90%), Query Frame = 1
Query:  178 SKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY--------------KAGAID--------TTLPCEPTTLDHAVLVVGFGEQD----GVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978
            ++ +F W +  DCAAC  +   GNY   NMP  FDWR     T V +Q YCGSCWSFSTA D+EG W+LAT +++  S QQLV C+       GC+GG P+AAMQY++  GG++  +D PY  V   G   + P GTPTC+T  +   +K   VAHIGGWQMVALG +YEDL+   ++KNGP+SI  NA GM+YY              +AG++             C+PT+LDHAVL VG+G Q      + YW++KNSWG  WGE GYYR+V+G N CG+AN  V SV+KDP
Sbjct:  217 AQGEFAWASASDCAACRKFTAFGNYNFGNMPDNFDWRTLGAVTSVKNQAYCGSCWSFSTAADVEGTWYLATDELISRSPQQLVECNTMNL---GCDGGYPFAAMQYLSHIGGMLSWDDLPYDKVFE-GDALANPVGTPTCNTHLINEKMKTHQVAHIGGWQMVALGDEYEDLMRVVLLKNGPLSIAFNANGMDYYIHGVAGGCSSAEDCEAGSVSHPDIDGEGDMFTCDPTSLDHAVLAVGYGVQTTDNGDIPYWLIKNSWGDAWGEDGYYRLVRGTNACGVANMVVHSVVKDP 506          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2GII5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GII5_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.110e-87
Identity = 140/290 (48.28%), Postives = 180/290 (62.07%), Query Frame = 1
Query:  160 VKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD--SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            V G  +   Q  W   +DCAAC MYP+  +Y   N PT+FDWR     + V +Q YCGSC+SFSTA +IEG  FLATG +   S+QQ+VACD      +GC+GG  Y AMQY+A  GGLV E+ YPYK V           GTP CDTD +   L+   S + HI  +Q VA+GA++E+L+   ++KNGP+++ +NA GM+YY                 AGAIDTT PC+PT LDH VL VG+G Q+G EYWV+KNSWG  WGE GYYR+ +G +HCG+AN     V K
Sbjct:   67 VGGEKLKAGQVRWGGVDDCAACAMYPDFSDYNYTNHPTDFDWRDLGAVSDVKNQKYCGSCYSFSTAQNIEGVHFLATGNLTTFSEQQIVACDFLN---DGCDGGYMYRAMQYIADFGGLVSEDAYPYKAVMM-----DYKLGTPHCDTDLLNEKLEGDGSNIGHISSYQWVAMGAEFENLMKIFLLKNGPLALAVNANGMDYYVHGITGCKTIAGWEYCDAGAIDTTTPCDPTELDHGVLAVGYGNQEGSEYWVIKNSWGPQWGEDGYYRLERGTDHCGVANMVTHGVYK 348          
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Match: A0A7S2BSW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSW9_9STRA)

HSP 1 Score: 270 bits (690), Expect = 3.730e-86
Identity = 149/293 (50.85%), Postives = 179/293 (61.09%), Query Frame = 1
Query:  175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSA--VAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAID------TTLP--CEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972
            IS  Q  W   + CAAC  YP    YT  N P  FDWR     T V +Q YCGSCW+FSTA DIEG  FLATG +   S+QQ VACD       GC+GG  +AAMQYVA  G LV EE YPY  V       +    TPTCDTD +   L+     +AHI G+QMVA+GA+YEDL+AT M+KNGP+SI +NA GM+YY                +AGAID      +T+   C PT LDH VL+V +GEQDGV+YWV+KNSW   WGE GYYR+ +G N CG++NFA  SV K
Sbjct:   12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAQDIEGTHFLATGNLTSFSEQQFVACDTYNY---GCDGGWMFAAMQYVADFGILVSEEAYPYMGVMM-----TYNLPTPTCDTDLLNSKLEGDGDDIAHIEGYQMVAMGAEYEDLMATYMLKNGPLSIAINANGMDYYVHGIVGCETIAGSEYCEAGAIDAPSDGDSTMEHTCNPTDLDHGVLLVAYGEQDGVDYWVIKNSWAETWGEDGYYRIERGVNKCGVSNFAQHSVYK 296          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178138 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK28_9STRA1.900e-248100.00Pept_C1 domain-containing protein (Fragment) n=1 T... [more]
A0A7S2BCN1_9STRA3.170e-11957.64Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
F0Y246_AURAN1.220e-10750.91Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2W4U9_9STRA5.200e-10353.74Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2BRB8_9STRA1.770e-9150.87Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2DDK6_9STRA6.860e-9150.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F0Y300_AURAN1.350e-9045.16Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3K4M5_9STRA4.210e-8847.62Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2GII5_9STRA2.110e-8748.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BSW9_9STRA3.730e-8650.85Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:226063..228536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178138|e_gw1.166.108.1
BRITEko00000,ko00001,ko01000,ko01002
KEGG Pathwayko04142,ko04210,map04142,map04210
KEGG koko:K01373
EC3.4.22.41
DescriptionBelongs to the peptidase C1 family
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG4870@1|root,KOG1542@2759|Eukaryota
Evalue2.01e-108
Seed ortholog44056.XP_009034680.1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCathepsin-like proteinase
Ec32 orthologEc-00_008060.1
TranscriptId178460
TrackFilteredModels1
ProteinId178138
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178138gene_13324Tribonema minus UTEX_B_3156 geneContig_166 226063..228536 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178138Trimin1|178138|e_gw1.166.108.1Tribonema minus UTEX_B_3156 polypeptideContig_166 226063..228536 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13324_6exon_13324_6Tribonema minus UTEX_B_3156 exonContig_166 226063..226281 -
exon_13324_5exon_13324_5Tribonema minus UTEX_B_3156 exonContig_166 226310..226310 -
exon_13324_4exon_13324_4Tribonema minus UTEX_B_3156 exonContig_166 227022..227167 -
exon_13324_3exon_13324_3Tribonema minus UTEX_B_3156 exonContig_166 227393..227693 -
exon_13324_2exon_13324_2Tribonema minus UTEX_B_3156 exonContig_166 228043..228212 -
exon_13324_1exon_13324_1Tribonema minus UTEX_B_3156 exonContig_166 228393..228536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13324CDS_13324Tribonema minus UTEX_B_3156 CDSContig_166 228393..228536 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13324 ID=mRNA_13324|Name=jgi.p|Trimin1|178138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=981bp|location=Sequence derived from alignment at Contig_166:226063..228536- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCATGGCCTTCGACAGCTACAGGACGCAGCACGCGCGCGCGTACGCGTC
CGACGGCGAGGCGGAGCGTCGCTTTGCCGCCTTCAAGTTGAACTTGGCGC
TCATCGACGCGCTCAACGACGCCAACCCGCTCGCGCTCTTCGAGGGGATC
AGCAGCAAGGTCAAGGGGCCGAACATCAGCAAGAGCCAGTTCGGGTGGAT
CACGGAGGAGGACTGCGCGGCGTGCGGCATGTACCCGGAGCTGGGCAACT
ACACGCTCGCCAACATGCCGACGGAGTTTGACTGGCGCGCCAAGTACGAG
ACGCCCGTCAGCAGCCAGGGGTACTGCGGCAGCTGCTGGTCGTTCAGCAC
GGCGGGCGACATTGAGGGCAAGTGGTTTCTGGCCACCGGCCAAGTCGTGG
AGCTGTCCAAGCAGCAGCTCGTGGCGTGCGATCAGAAGCGAAACGCCGCA
GAGGGCTGCAACGGCGGCCTGCCTTATGCAGCCATGCAGTACGTCGCCAG
CACTGGGGGCCTTGTGTATGAGGAGGACTATCCGTACAAAAATGTATGCG
CATGGGGGACGTGCGGCAGCGCTCCGAAGGGGACGCCCACCTGCGACACG
GATCAGGTGCGGGGGAGCCTCAAAGACAGCGCCGTTGCGCACATTGGGGG
ATGGCAGATGGTAGCCTTGGGCGCACAGTACGAGGACCTACTGGCCACGG
CCATGGTCAAGAATGGGCCCATCTCAATCGTGCTCAACGCAGTCGGCATG
GAGTACTACAAAGCAGGAGCCATCGACACCACGCTTCCATGCGAACCAAC
CACATTAGACCACGCTGTCCTCGTGGTAGGGTTTGGGGAGCAAGACGGGG
TGGAGTACTGGGTGGTGAAGAATAGCTGGGGGAGCTGGTGGGGGGAAGGG
GGGTACTACAGGGTCGTCAAGGGGCAGAACCACTGCGGGCTGGCGAACTT
TGCCGTTACATCCGTCATCAAGGACCCCTGA
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protein sequence of jgi.p|Trimin1|178138

>Trimin1|178138|e_gw1.166.108.1 ID=Trimin1|178138|e_gw1.166.108.1|Name=jgi.p|Trimin1|178138|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=327bp
RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGI
SSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE
TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAA
EGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDT
DQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGM
EYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEG
GYYRVVKGQNHCGLANFAVTSVIKDP*
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mRNA from alignment at Contig_166:226063..228536-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13324 ID=mRNA_13324|Name=jgi.p|Trimin1|178138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2474bp|location=Sequence derived from alignment at Contig_166:226063..228536- (Tribonema minus UTEX_B_3156 )
CGCATGGCCTTCGACAGCTACAGGACGCAGCACGCGCGCGCGTACGCGTC CGACGGCGAGGCGGAGCGTCGCTTTGCCGCCTTCAAGTTGAACTTGGCGC TCATCGACGCGCTCAACGACGCCAACCCGCTCGCGCTCTTCGAGGTCAAT GAGTACGCCGACATGACGGCGGAGGAGCGCGCGGGGCGCCGCATGAGCGC TGCCTTTGCGAATTACCAGACGCTGCTGGGGTCTCTGCCCGCGGGGGTGG TGGAGGGGGAGCCCCGGCCTGCGGTGGGGGGCCAGGAGGCAGCGCTCAAG GGGGGGTTAAAGGGGGGGGGCAAGGGGATCAGCAGCAAGGTCAAGGGGCC GAACATCAGCAAGAGCCAGTTCGGGTGGATCACGGAGGAGGACTGCGCGG CGTGCGGCATGTACCCGGAGCTGGGCAACTACACGCTCGCCAACATGCCG ACGGAGTTTGACTGGCGCGCCAAGTACGAGACGCCCGTCAGCAGGTCAGT GCTCCGCACAAGGGTTTTGTTGAACATGAGTTTTGGTCAAAGTTCATTAA TGATGACACAGCTGGAGGTATTGCGGCTGGTGCTGGTTGTTCAGCACGGC GGGCGGCATTGCGGTCAAGCGGTTCACTTCCGCTTGTGTCATTTTCAAAA CTCACATTGCTTTGGATACGCGCTCCGCAGCCAGGGGTATGCTGGTTGGT CACTGCAGTAAACATGCAAGATGGGCAGGTCACTTCAGAACGGGCAGGTT ACTGTAACAGGTCACTTCAACACGTGACGCTCCTAATCAAACGCCCGCTT CAATTCAAGGTCACACCTCACCGCTCGCGCATTCGCTCAACAGCCAGGGG TACTGCGGCAGCTGCTGGTCGTTCAGCACGGCGGGCGACATTGAGGGCAA GTGGTTTCTGGCCACCGGCCAAGTCGTGGAGCTGTCCAAGCAGCAGCTCG TGGCGTGCGATCAGAAGCGAAACGCCGCAGAGGGCTGCAACGGCGGCCTG CCTTATGCAGCCATGCAGTACGTCGCCAGCACTGGGGGCCTTGTGTATGA GGAGGACTATCCGTACAAAAATGTATGCGCATGGGGGACGTGCGGCAGCG CTCCGAAGGGGACGCCCACCTGCGACACGGATCAGGTGCGGGGGGTGGCG CATACATGCATGATGCCTGGCGCGTCCTCTCTGTATGTGGACTTGTGTAT AGCCTGTCCCCGTGCATACTTTTACATGTACCCGCTGCTGATGCTGTTGA TGATCATCCTGCCCTCTTCAGCTGCTGCAGGCTGTTTCATAAATATATGC TCAGCAACTGCTGCCACCTCTGTGCGTGTGCCTGCCACCTGTAACCATAC CCGCTCTCAGGTCAATGAGAGCCTCAAAGACAGCGCCGTTGCGCACATTG GGGGATGGCAGATGGTAGCCTTGGGCGCACAGTACGAGGACCTACTGGCC ACGGCCATGGTCAAGAATGGGCCCATCTCAATCGTGCTCAACGCAGTCGG CATGGAGTACTACAAGTGAGCTGAATGAAATGCCTGGTAGTGATTCACGG GCTGTGCCAGTTACCCTCATCGAACAAGTGACATATTGCACTGCACAGCA GCATAGCTGCTGTGATGCTTGGTGCGAGTCAGCTGCTTTGAGTCAGTTAC TTCAAGTGATTTCTTGCCCTCAGGTTCACCTCGATTACTCATGTTGCACG TGTCTGCTGTGGTTCATACACATCCATGGCCAGCTCCTATGTATTATGCG CCTTATGACACCCAAGTATCACAAACTGATTACCGTTTAGCATGATCACC GTGTGTCGCGCTGAGCATCATTGCTGTGTGTCACGTTGAGTAACATCGCC ACGTGCCGCGTTGAGCATCACTGTGTGCCCACAACCAGCATCATCATACG TGCCACCACATTGAAGCATCACCATCACCATGTGCTACTGCATTGAGCGC CAAGGTCGTGTGTACCAACACAATGAACACCATAATTGTGTGCCACCACA TTTGAGCATCATCGCCATATGCCACCGCAGCCAGCATCCTCCGCCGCGCC ACCACACAGAGCATTCGTCCTGTGTACTCCATGCTCACCTACTTGACAAT TGTGCTCTGAGCACGTCATCGCGTGCCACCACATTTGAGCATCATTATCA TTATCCGCTGCACGCTAACCCGCCTACGCATGCTCCTGCTCTACTTGCAC CAGGCACGGCATCACCGGCTGTCCAGAGTACGTCTCAGGAACGGAGTACT GCAAGGCAGGAGCCATCGACACCACGCTTCCATGCGAACCAACCACATTA GACCACGCTGTCCTCGTGGTAGGGTTTGGGGAGCAAGACGGGGTGGAGTA CTGGGTGGTGAAGAATAGCTGGGGGAGCTGGTGGGGGGAAGGGGGGTACT ACAGGGTCGTCAAGGGGCAGAACCACTGCGGGCTGGCGAACTTTGCCGTT ACATCCGTCATCAAGGACCCCTGA
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Coding sequence (CDS) from alignment at Contig_166:226063..228536-

>mRNA_13324 ID=mRNA_13324|Name=jgi.p|Trimin1|178138|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=981bp|location=Sequence derived from alignment at Contig_166:226063..228536- (Tribonema minus UTEX_B_3156 )
CGCATGGCCTTCGACAGCTACAGGACGCAGCACGCGCGCGCGTACGCGTC
CGACGGCGAGGCGGAGCGTCGCTTTGCCGCCTTCAAGTTGAACTTGGCGC
TCATCGACGCGCTCAACGACGCCAACCCGCTCGCGCTCTTCGAGGGGATC
AGCAGCAAGGTCAAGGGGCCGAACATCAGCAAGAGCCAGTTCGGGTGGAT
CACGGAGGAGGACTGCGCGGCGTGCGGCATGTACCCGGAGCTGGGCAACT
ACACGCTCGCCAACATGCCGACGGAGTTTGACTGGCGCGCCAAGTACGAG
ACGCCCGTCAGCAGCCAGGGGTACTGCGGCAGCTGCTGGTCGTTCAGCAC
GGCGGGCGACATTGAGGGCAAGTGGTTTCTGGCCACCGGCCAAGTCGTGG
AGCTGTCCAAGCAGCAGCTCGTGGCGTGCGATCAGAAGCGAAACGCCGCA
GAGGGCTGCAACGGCGGCCTGCCTTATGCAGCCATGCAGTACGTCGCCAG
CACTGGGGGCCTTGTGTATGAGGAGGACTATCCGTACAAAAATGTATGCG
CATGGGGGACGTGCGGCAGCGCTCCGAAGGGGACGCCCACCTGCGACACG
GATCAGGTGCGGGGGAGCCTCAAAGACAGCGCCGTTGCGCACATTGGGGG
ATGGCAGATGGTAGCCTTGGGCGCACAGTACGAGGACCTACTGGCCACGG
CCATGGTCAAGAATGGGCCCATCTCAATCGTGCTCAACGCAGTCGGCATG
GAGTACTACAAAGCAGGAGCCATCGACACCACGCTTCCATGCGAACCAAC
CACATTAGACCACGCTGTCCTCGTGGTAGGGTTTGGGGAGCAAGACGGGG
TGGAGTACTGGGTGGTGAAGAATAGCTGGGGGAGCTGGTGGGGGGAAGGG
GGGTACTACAGGGTCGTCAAGGGGCAGAACCACTGCGGGCTGGCGAACTT
TGCCGTTACATCCGTCATCAAGGACCCCTGA
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