mRNA_13190 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352248
Unique Name	mRNA_13190
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: A0A835ZD91_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD91_9STRA)

HSP 1 Score: 1292 bits (3344), Expect = 0.000e+0
Identity = 752/752 (100.00%), Postives = 752/752 (100.00%), Query Frame = 1

Query:    1 MTSCALGQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQGYMDENALRRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVRDSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            MTSCALGQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQGYMDENALRRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVRDSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF
Sbjct:    1 MTSCALGQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQGYMDENALRRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVRDSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 752

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: M4C6C9_HYAAE (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6C9_HYAAE)

HSP 1 Score: 137 bits (344), Expect = 5.920e-30
Identity = 175/701 (24.96%), Postives = 272/701 (38.80%), Query Frame = 1

Query:   22 QQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKAD------KQGYMDENA------------------------LRRRIERAFDTLVQERFIVKVAPLDL--TRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISET-QSSTVWRVGHDQFHRLVRDSMG--------NKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTV 2001
            ++ L L+++GE FGD+   VA+ LLR +   L ++  +++R           PP  +    +  ALL L QHN LDV             DG   + YK+ V E + RLR P+F+  A+   G     ++E +LL GR+ R D     +    AD      KQG   E                           R ++   F  + ++R+I +V PL++    P   P   A + +  + S   NA   G                 E G  + VRK+KR    P  +  +A+P+E+QMMLD                   A E    + D+ EAE+E  PA+  RA+                      RA                  RG   +   A G+ +                          +E S + T + S VWR G  Q  R +R            N +A  ++  +++ ++P ER   +  S PV+  +  +   SV +A  A A             NN                    R+ L +              +   C  K  +V   A  V+ +T    G+G ++V++   ++ F Q    H +I +KY V +ARI R+LLEKR +EQ+ I + ALLP  + R +LY LY D L+ +QE+ + A H P  T Y W+V
Sbjct:   14 ERALVLSVVGEDFGDLAGQVAETLLRAEGLRLSEVAAKLQRPTMSH-----APPSSVH--HITGALLKLLQHNLLDVTPVAGRS------DGVQIVTYKVNVQEALYRLRFPKFMQQANESFGVAGQVIMEEVLLQGRV-RMDQSLETMAYNLADQRRLERKQGQAQEGGDQSCRTTENEGNEEEEVSEHELDECRDQVREVFVEMAKKRYISRVHPLEVKVAEPKEAPDFPASITRGQEKSRMTNANIDGTTATTDADKKRGTAVD-EDG--LTVRKKKRKI--PSQQSGNAIPVELQMMLD-------------------ADEAARNEKDDSEAEWEPSPASTGRASK---------------RKKSAKRAKLPT--------------RGTLSENATAGGETSGEDV----------------------SEGSGAHTDERSLVWRFGVTQLLRDLRHKACIRFATENVNAVAGAVVAAMLQHSSPHEREKDEPTSFPVSARELFE-MESVKKALPAEA-------------NN------------------PWRLLLNY--------------MMVMCRDKSGMVMKVAHEVIDSTQAHAGDGGRYVVHMQKIVEFLQHATTHAYIQEKYGVASARIVRLLLEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLILQEISKRADHNPAFTFYCWSV 579

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: W4H4R1_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4R1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.200e-28
Identity = 169/726 (23.28%), Postives = 293/726 (40.36%), Query Frame = 1

Query:   22 QQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKRE--IEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDV--IMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQ----GYMDENA--------LRRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAA-ELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVR---------DSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTT-VVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHAD 2118
            +++LALN+L EHFGD+V+ VA  LLR D    G  +R + +   +       P P  Q     +K+ALL L QHN LD+      A+  ++ K+  P  + Y+L   E + RLR  R++ LA  + G     ++E LL++GR+ R D     +    AD++    G  D  A        L+  ++  F  + + R+I++V PLD  +           KK  DF       G  +                     +  +KRK  A    D    A+P+E+Q+M+          Q  +GG S   A E+      E   +   L  AK                                                     +PA G A+                      ++G     +S  + +T+WR G  Q  R +R         DS+ N +A+ I+  ++  ++P ER A+++ S P+   D     L++     A                              +P+       L +F             L   C H   +V   A  V   T  V  G+G  + ++  N++   Q++++  F+ +KY   +AR+ R++ E+R +EQ+ + + ALLP  ETRS+L+ +Y D L+++QE+P+   + P+ T Y W+V    +T  +V+  +++++ +R RR+    +++  I  +D
Sbjct:    7 RRRLALNLLQEHFGDVVEHVASVLLRADDG--GYTLRELVQHALVSPPAHLQPRPTTQ----HIKTALLKLLQHNLLDIKATWLPADSAKKQKL--PYIVRYELNHDEALLRLRFARYIELARELFGDEGEVIMEELLVNGRI-RLDQSLDAMARNLADQRRAATGDPDAPAADDDELEDLKESLKTTFLNMAKSRYILRVHPLDFNK-----------KKAHDFD-----DGEAQYEIPSSSSVTSTGGDSXXXXXIKHKKRKGPANAAAD---SAVPIEVQLMM----------QAENGGLSSSLADEVSEAVTSESGTKRRRLKRAK-----------------------------------------------------LPAVGAASSSSSSPLSNDSMPF-------DSVG---EDVSLKEENTIWRYGGVQLTRELRHRTCIQFAHDSV-NVVAEAIVKAMLAHSSPHERDANEATSVPMTARD----LLAIPAVYDA------------------------------VPSKHDRWKMLLNF-------------LTAMCQHPSGMVTKVAAEVFDPTHAVRAGDGGTYSVHMQNIVKTLQRKSIQAFVHEKYGAASARLVRVITEQRQLEQKALGEMALLPAAETRSRLFDMYRDKLLNLQEIPKRTDYNPQFTLYCWSVDDIRLTRRLVERAQESIVKLRTRRKDEAESHKDLIARSD 583

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: A0A485LNW3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNW3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.180e-25
Identity = 171/768 (22.27%), Postives = 295/768 (38.41%), Query Frame = 1

Query:   22 QQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQIS--GKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVV--NVLKADKQGYMDENA----------LRRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVR--------DSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDK-GEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            +++L LN+L EHFGD+V+ VA  +L+ D   L        REI       P   LQ +     +K+ LL L QHN LD+           K   P  + Y+L   E + RLR  R++ LA  + G     ++E +L++GR+ R D     +  N+ +  +    D +A          L+  ++  F  + + R++V+V PLDL +      T  ++    +F   +N                      ++G  V   KRK  A    D    ++P+E+Q+M+          Q  D G+S  A           EA   +  A + R                                                   +P  G AA                         G   +    + + +WR G  Q  R +R            N +AQ I+  ++  ++P ER A+++ S P+     RD F                     P  ++A            +P+ +     L +F             L   C H   ++  +A      +   + G+G  + ++  N++   Q++++H FI +KY   +AR+ R++ E+R +EQ+ + + ALLP  ETRS+L+ +Y D L+++QE+P+   + P+ T Y W+V    +T  +V+      + +R RR+    +++  I  +D+        +           +  SL RL    L LD  LMLF  F
Sbjct:    7 RRRLVLNLLQEHFGDLVEHVAAVILKADDDGL------TLREIIAHALASPPAHLQPTPTAPHIKTGLLKLLQHNLLDIKSTWVPANSTKKQKLPYIIRYQLNHDEALLRLRFARYIELAREVFGDEGEVIMEEILVNGRI-RLDQSLDTMAFNLAEQRRLAKNDPDAPAADEDELEDLKDSLKTTFLNMAKTRYLVRVHPLDLNKKK----TDGEMDGEAEFQSSSNGASTSP---------------ADSGVSVRRAKRKGPASAAAD---SSVPIEVQLMM----------QAEDAGSSSAATAPEGTT----EAVVSESGAKRRRLKRAK----------------------------------------------LPTVGVAAAAAPGLTIDN---------------GDLDAAYLKEENAIWRAGVTQLTRELRHRTCIQFASESINVVAQAIVKAMLAHSSPHERDANEATSFPMT---ARDLF-------------------EIPAVHDA------------VPSPRDRWKMLLNF-------------LTAMCQHPSGMLTKTASESFDPSHPKRAGDGGTYSVHMQNIVKTLQRKSIHAFIHEKYGAASARLVRVITEQRQLEQKTLGEMALLPAAETRSRLFEMYRDKLLNLQEIPKRTDYNPQFTLYCWSVDDTRLTRRLVERTMDTTVKLRARRKDQADSHKDLIARSDQLVEQHDLDK--------FDRVSRSLDRLXXGILHLDRMLMLFDQF 615

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: A0A5D6XL36_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL36_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.490e-25
Identity = 96/345 (27.83%), Postives = 157/345 (45.51%), Query Frame = 1

Query: 1246 QSSTVWRVGHDQFHRLVRDSMG--------NKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            + + VWR G DQ  R +R +          N +A  I+  +++ ++P ER   ++ S PV            +   FA      + A+ + LP +++                T R+ L +                  C  K  +V   A      T    G+G ++V++   ++AF +Q   H ++ DK+ VP+ARI R+L+EKR +EQQ I + ALLP  + R +LY L+ + L+ +QEVP+ A H P  T Y W+V    M  ++ + +E +L  +R RR+     N+  I  +D+          +A        L  +L RL  A L+LD  LML+R F
Sbjct:  372 EQALVWRFGADQLMRDLRHAACVRFATENINTVAGVIVAAMLQHSSPHEREKDEATSYPV-----------TARELFA------VPAVKSALPKDSK---------------DTWRLLLNYITV--------------MCRDKSGMVMKVAPETFDATQARAGDGGQYVVHMQKIVAFLRQATTHAYVQDKFGVPSARIVRLLVEKRQLEQQTIGELALLPSNDARRRLYELFAERLVKLQEVPKRADHNPAFTLYCWSVDVPRMERSVRERVEASLCKLRARRKLEAEQNKELIARSDQL--------VEANDVAKFDKLSRALDRLDRAVLQLDAMLMLYRDF 662

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: W7U6Z3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Z3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.970e-25
Identity = 206/793 (25.98%), Postives = 309/793 (38.97%), Query Frame = 1

Query:    7 SCALGQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKA------------DKQGYMDENALRRRIERAFDTLVQERFIVKVAPLD--LTRPSPPPTTGAQLKKMMDFSLPANARG-RGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLD---EDEDALPMEMQMMLDN-----ARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISE---TQSSTVWRVGHDQFHR---------LVRDSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPT--------ARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            S A  Q KLALNIL EHFG +V+ +   +LR  +  L +I R      +   R G    L +    +K AL++L QHN L V M T++E+ R K   PL +YY++ +     RLR P+F+  A  + G    A VEA++ HGRL  + ++A V    KA               G  D  A       A D  V    +V+   L+  L R  P          +      A ARG R     XXX          E G       +KR  Q  L    E ++ + +E+   L       A  +S  G+    G  GG   + AR+              K R+                    G ++               GG G G G +   A G                          +GG E S++E        +WRVG +QFHR          VR  + N  A+ ++  +++ + P+ER   D    P      R   LS+ E +   +R QL                     PP++    T++++L+   +  +  V       G+    + V                            +I   +QR LH+ I ++Y   +        ARI R+LL+K+Y++ Q +++ A++  +ETR +LY +Y D L+++QE+PR A H P  T YLWT     +   +   + K  LN+RLRRQ      R  +  A+K N  +    A      H   L  +L RL  A   LD TLMLF  F
Sbjct:   11 SSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEIWR------DSDNRNGNLHKLGL----IKEALVILLQHNLLVVAMPTSDEMLR-KHTKPL-IYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACA-DASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKXXXSAVLSKGAETEAG-------KKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGE----GPVGGPLSILARKR------------FKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGG-GEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGG-EESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKV-NTTAESLVRAILQHSLPLER---DGTVAP-----PRSQPLSLGELS---SRVQL---------------------PPNV----TVKMYLEVLQNDPVQIVDRE----GTATDVYCVCL------------------------GRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLL--ANKENIRDDVEAA------HFDQLTTTLDRLDQALENLDATLMLFTVF 692

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BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: A0A024UGS9_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGS9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.770e-25
Identity = 190/776 (24.48%), Postives = 317/776 (40.85%), Query Frame = 1

Query:   22 QQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIEDGRRRGPGPPLQISGK--QVKSALLVLCQHNCLDVIMQTAEELRRSKVDGPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQGYM--------DENAL---RRRIERAFDTLVQERFIVKVAPLDLTRPSPPPTTGAQLKKMMDFSLPANARGRGKPGXXXXXXXXXXXXXXETGPPVAVRKRKRVAQQPLDEDEDALPMEMQMMLDN-----ARMLSGQGQLFDGGTSGGAAELRARQYDEDEAEFEDLPAAKSRAAHVXXXXXXXXXXXXXXXXXGCARAXXXXXXXXXXXXXXGGRGRGRGGKAIPAAGDAAXXXXXXXXXXXXXXXXXXXXXQAIGGAERSISETQSSTVWRVGHDQFHRLVR---------DSMGNKLAQDIMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTT-VVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKF---NTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            +++LALN+L EHFGD+V+ VA  LLR D            RE+       P   LQ   K   +K+ALL L QHN L++           K+  P  + Y+L   E + RLR  R++ LA  + G     ++E LL++GR+     +  +   L   ++           DE+ L   +  ++  F  + + R+I++V PLD  +           KK  DF       G  +  XXXXXXXXXXXXXX           K ++    D    A+P+E+Q+M+       A +  G     +  TS    + R  +     A+   + AA S                                                   A P+AG                        QA+      +S  + +T+WR G  Q  R +R         +S+ N +AQ I+  ++  ++P ER A+++ S P+     RD F ++ E   A                              +P+       L +F             L   C H   ++  +A  V   T  V  G+G  + ++  N++   Q++++  F+ +KY   +AR+ R++ E+R +EQ+ + + ALLP  ETRS+L+ +Y D L+++QE+P+   + P+ T Y W++  A +T  +++  +  ++ +R RR+    +++  I  +D+    N ++   R              SL RL  A L LD  LMLF  F
Sbjct:    7 RRRLALNLLQEHFGDVVEHVASVLLRADDGGY------TLRELVQHSLSSPPAHLQPRPKAQHIKTALLKLLQHNLLEIKATWLPADSAKKL--PYIIRYELNHEEALLRLRFTRYIELAREVFGEEGEVIMEELLVNGRIRLDQSLDGMAATLAEQRRAASTDPDAPAADEDELEDIKESLKNTFLNMAKNRYILRVHPLDFNK-----------KKAHDFDS-----GEAEFEXXXXXXXXXXXXXXXXXXXXXXXXXKGLSTTAAD---PAVPIEVQLMMQAESNSLASLADGDDTPVEPVTSESGTKRRRLKR----AKLPTVGAASS---------------------------------------------------AEPSAG-------------------LVFTPQAL---VEDVSLKEENTIWRYGGVQLTRELRHRTCIQFAHESI-NVVAQAIVKAMLAHSSPHERDANEATSFPMT---ARDLF-AIPEVHDA------------------------------VPSKHDRWKMLLNF-------------LTAMCQHPSGMLTKTAPEVFDPTHAVRAGDGGTYSVHMQNIVRTLQRKSIQAFVHEKYGAASARLVRVITEQRQLEQKTLGEMALLPAAETRSRLFEMYRDKLLNLQEIPKRTDYNPQFTLYCWSIDDARLTRRLLERAQSTIVKLRARRKGEAESHKDLIARSDQLVEQNDLDKFDRVSR-----------SLDRLDRATLHLDHMLMLFDQF 619

[Close]

BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: K3X6M8_GLOUD (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6M8_GLOUD)

HSP 1 Score: 119 bits (298), Expect = 3.160e-24
Identity = 98/345 (28.41%), Postives = 156/345 (45.22%), Query Frame = 1

Query: 1246 QSSTVWRVGHDQFHRLVRDSMGNKLAQD--------IMVELMKLAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLPNNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            + S VWR G DQ  R +R     K A +        I+  ++K ++P ER   +  S PV              A   +   ++ RA    LP +++                T R+ L +                  C  K  +V   A      T    G+G ++V++   ++ F +Q   H++I +KY V +ARI R+LLEKR +EQ+ I + ALLP  + R +LY L+ ++L+ MQE+P+ A H P  T + W+V   LM  ++ + I  +L  +R RR+     N+  I  +D+   +E    AK         L  +L RL  A ++LD  LML+R F
Sbjct:  356 EQSLVWRFGVDQLMRDLRHKACTKFATENINNVAGVIVGAMLKHSSPHEREKDEPTSFPVT-------------ARELFGMDEVKRA----LPKDSK---------------DTWRLLLNYITV--------------MCRDKSGMVMKVAQETFDATQARPGDGGQYVVHMKKIVEFLRQATTHSYIQEKYGVQSARIVRLLLEKRQLEQKTIGELALLPSNDARRRLYELFTENLVKMQEIPKRADHSPAFTVFCWSVDLPLMEKSVAERILTSLCKLRARRKMEAEQNKDLIARSDQL--VEANDLAK------FDKLSRALDRLDRAIIQLDAMLMLYRDF 646

[Close]

BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: G4Z0C0_PHYSP (DNA-directed RNA polymerase III subunit RPC3 (Fragment) n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z0C0_PHYSP)

HSP 1 Score: 118 bits (296), Expect = 4.430e-24
Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 1

Query: 1639 CNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            C  K  +V   A      T    G+G ++V++   ++ F QQ   H +I DKY V +ARI R+L+EKR +EQ+ I + ALLP  + R +LY LY D L+ MQE+P+ A H P  T + W+V    M A + + ++ +L  +R RR+     N+  I  +++          +A        L  SL RL  A + LD  LML+R F
Sbjct:  403 CRDKSGMVMKVAQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQL--------VEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 600

[Close]

BLAST of jgi.p|Trimin1|352248 vs. uniprot
Match: A0A225X0I3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0I3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.750e-24
Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 1

Query: 1639 CNHKHSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYDVPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEVPRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRHYIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFRTF 2256
            C  K  +V   A      T    G+G ++V++   ++ F QQ   H +I DKY VP+ARI R+L+EKR +EQ+ I + ALLP  + R +LY LY D L+ MQE+ + A H P  T + W+V    M   + + ++ +L ++R RR+     N+  I  +++          +A        L  SL RL  A + LD  LML+R F
Sbjct:  429 CRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKYGVPSARIVRVLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEISKRADHNPAFTFFCWSVDEPQMQVRITERVQDSLCHLRRRRKFEAEENKELIARSEQL--------VEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 626

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352248 vs. uniprot

BLAST of jgi.p|Trimin1|352248 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZD91_9STRA	0.000e+0	100.00	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
M4C6C9_HYAAE	5.920e-30	24.96	DNA-directed RNA polymerase III subunit RPC3 n=2 T...	[more]
W4H4R1_9STRA	2.200e-28	23.28	DNA-directed RNA polymerase III subunit RPC3 n=11 ...	[more]
A0A485LNW3_9STRA	1.180e-25	22.27	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
A0A5D6XL36_9STRA	1.490e-25	27.83	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
W7U6Z3_9STRA	2.970e-25	25.98	DNA-directed RNA polymerase III subunit RPC3 n=2 T...	[more]
A0A024UGS9_9STRA	3.770e-25	24.48	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
K3X6M8_GLOUD	3.160e-24	28.41	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
G4Z0C0_PHYSP	4.430e-24	34.47	DNA-directed RNA polymerase III subunit RPC3 (Frag...	[more]
A0A225X0I3_9STRA	6.750e-24	33.98	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_113	contig	Contig_113:266839..279681 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352248\|estExt_Genemark1.C_Ctg_1130033
Description	Source PGD
COG category	K
Max annot lvl	121069\|Pythiales
EggNOG OGs	KOG2587@1\|root,KOG2587@2759\|Eukaryota,1MFAR@121069\|Pythiales
Evalue	5.23e-34
Seed ortholog	65071.PYU1_T012877
Hectar predicted targeting category	other localisation
TranscriptId	352570
Track	FilteredModels1
ProteinId	352248

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352248	gene_13190	Tribonema minus UTEX_B_3156	gene	Contig_113 266839..279681 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352248	Trimin1\|352248\|estExt_Genemark1.C_Ctg_1130033	Tribonema minus UTEX_B_3156	polypeptide	Contig_113 266839..279677 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13190_1	exon_13190_1	Tribonema minus UTEX_B_3156	exon	Contig_113 266839..266969 +
exon_13190_2	exon_13190_2	Tribonema minus UTEX_B_3156	exon	Contig_113 267218..267403 +
exon_13190_3	exon_13190_3	Tribonema minus UTEX_B_3156	exon	Contig_113 267971..268146 +
exon_13190_4	exon_13190_4	Tribonema minus UTEX_B_3156	exon	Contig_113 268956..269263 +
exon_13190_5	exon_13190_5	Tribonema minus UTEX_B_3156	exon	Contig_113 269968..270128 +
exon_13190_6	exon_13190_6	Tribonema minus UTEX_B_3156	exon	Contig_113 270237..270305 +
exon_13190_7	exon_13190_7	Tribonema minus UTEX_B_3156	exon	Contig_113 270376..270432 +
exon_13190_8	exon_13190_8	Tribonema minus UTEX_B_3156	exon	Contig_113 271265..271392 +
exon_13190_9	exon_13190_9	Tribonema minus UTEX_B_3156	exon	Contig_113 272622..272695 +
exon_13190_10	exon_13190_10	Tribonema minus UTEX_B_3156	exon	Contig_113 273485..273607 +
exon_13190_11	exon_13190_11	Tribonema minus UTEX_B_3156	exon	Contig_113 273665..273716 +
exon_13190_12	exon_13190_12	Tribonema minus UTEX_B_3156	exon	Contig_113 274373..274524 +
exon_13190_13	exon_13190_13	Tribonema minus UTEX_B_3156	exon	Contig_113 275137..275214 +
exon_13190_14	exon_13190_14	Tribonema minus UTEX_B_3156	exon	Contig_113 275798..275926 +
exon_13190_15	exon_13190_15	Tribonema minus UTEX_B_3156	exon	Contig_113 276710..276775 +
exon_13190_16	exon_13190_16	Tribonema minus UTEX_B_3156	exon	Contig_113 277822..277935 +
exon_13190_17	exon_13190_17	Tribonema minus UTEX_B_3156	exon	Contig_113 278528..278681 +
exon_13190_18	exon_13190_18	Tribonema minus UTEX_B_3156	exon	Contig_113 279516..279538 +
exon_13190_19	exon_13190_19	Tribonema minus UTEX_B_3156	exon	Contig_113 279600..279681 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13190	CDS_13190	Tribonema minus UTEX_B_3156	CDS	Contig_113 266839..266969 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13190	UTR3_13190	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_113 279678..279681 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_113:266839..279681+
coding sequence from alignment at Contig_113:266839..279681+

spliced messenger RNA

>mRNA_13190 ID=mRNA_13190|Name=jgi.p|Trimin1|352248|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2263bp|location=Sequence derived from alignment at Contig_113:266839..279681+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGAGCTGCGCTCTGGGGCAGCAGAAGCTGGCTCTTAATATCCTGGG
AGAGCACTTTGGGGACATCGTCAAGGTTGTCGCCCAGGCGCTGCTGAGGG
TGGACAAGGCCATGCTGGGTGACATCATCAGGCGCGTCAAGCGGGAAATA
GAGGACGGGCGGCGGCGAGGGCCGGGCCCCCCCCTGCAGATCTCGGGCAA
GCAGGTCAAGAGCGCGCTGCTGGTGCTGTGCCAGCACAACTGCCTGGACG
TGATCATGCAGACGGCGGAGGAGCTTCGCCGCTCCAAAGTGGACGGGCCG
CTCAAGCTGTACTACAAGCTGCGTGTGTCGGAGTGCATAGAGCGCCTGCG
CGGCCCGCGCTTCGTGCACCTGGCCAGCGTCATGCACGGCGCGCTGGCGG
CGGCGGTCGTGGAGGCGCTGCTGCTGCACGGCCGCCTCTGCCGCGCAGAC
GTCGTCGCGCATGTGGTCAACGTGCTCAAGGCAGACAAGCAAGGCTACAT
GGACGAGAACGCGCTGCGGCGGCGCATCGAGCGCGCCTTCGACACGCTCG
TCCAGGAGCGCTTCATCGTCAAGGTCGCGCCGCTCGACCTCACGCGCCCC
TCGCCCCCCCCCACGACGGGCGCGCAGCTCAAGAAGATGATGGACTTCTC
GCTGCCGGCGAACGCGCGCGGGCGGGGGAAGCCGGGGGGGGGCGGCGGCG
GCGGCGGCGCGGCAGGGGGGGATGGGGGGGAGACGGGGCCGCCTGTCGCT
GTGCGCAAGCGCAAGCGCGTCGCGCAGCAGCCGCTGGACGAGGACGAGGA
TGCGCTGCCCATGGAGATGCAGATGATGCTGGACAACGCGCGCATGCTCT
CGGGTCAGGGGCAGTTGTTCGATGGCGGCACCAGCGGCGGCGCCGCCGAG
CTGCGCGCGCGCCAGTACGACGAGGACGAAGCGGAGTTTGAGGACCTGCC
CGCCGCCAAGAGTCGAGCTGCGCACGTGCGCCAGTACGACGAGGAGGAAG
CGGAGTACGACGACCTGCCCGCCGCCAAGGGCTGCGCGCGCGCCGACGAG
GAGGAAGCGGAGTTCGAGGACCTGCCCGCCGCCAAGGGGGGCCGCGGTCG
TGGAAGGGGCGGCAAAGCCATCCCTGCAGCGGGCGACGCGGCTGCAGCAG
CACCGGCGGAAGCGGCAGCGGCGGCGCCGCCTGCGGCAGCAGCACTGGCA
CCAGCGCAGGCCATTGGCGGCGCCGAACGGTCCATCTCCGAGACGCAGAG
CTCCACCGTCTGGCGCGTGGGGCACGACCAGTTTCACAGGTTGGTGCGCG
ACTCCATGGGCAACAAGCTGGCGCAGGACATCATGGTGGAGCTCATGAAG
CTGGCGGCGCCAATGGAGCGCTCCGCGCACGACTCGCACAGCACGCCGGT
CGCGTTCATCGATAAGCGTGACGGCTTCCTAAGCGTGTCAGAAGCGGCCT
TCGCGTACGCGCGAGCGCAGCTGCTGCGCGCCATGACCACGCCGCTGCCC
AACAACGCGCGCCTGTACCGCGTTGGCGTGGGCGCGCCGCCCTCCCTGCC
CACCGCGCAGACGCTGCGCGTCTTCCTGCAGCACTTTGCCAGCGGCAAGA
TGGCCAGCGTCACCGAGAGCCGCCTGCTGCGAGGCTCCTGCAATCACAAA
CACTCAGTCGTCGCGCTCTCAGCGCTCGTGGTCATGTTCACGACGGTCGT
CGACAAGGGCGAGGGCGCCAAGTTTGTCATCAACTACGCTAACATGATCG
CGTTCGCGCAGCAGCGCGCGCTGCACACGTTCATCGCCGACAAGTACGAC
GTCCCCACGGCGCGCATCACCAGGATCCTGCTCGAGAAGCGGTACATGGA
GCAGCAGGGCATCACTGACGAAGCGCTGCTGCCTCAGAAGGAAACGCGCA
GCAAGCTGTACACGCTGTACCACGACCACCTGATCTCCATGCAGGAGGTG
CCGCGCACCGCGTCGCACGAGCCCAAGACGACCACCTACCTGTGGACCGT
GCGGCCTGCGCTCATGACGGCGACCATGGTGGACAACATTGAGAAGGCAT
TGCTCAACGTGCGCCTGCGGCGGCAGCACCTGTACGCCACCAATCGCCAC
TACATTGAGCACGCGGACAAGTTCAACACCATGGAGACCAAGCACCGCGC
AAAGGCAAAGCACTGCCGCCACCTGACCATGCTAGTGGGGAGTCTGCAGC
GCCTGTCGATGGCCCAGCTCAAACTCGACGAGACGCTCATGCTCTTCAGG
ACGTTCTAGGCGC

protein sequence of jgi.p|Trimin1|352248

>Trimin1|352248|estExt_Genemark1.C_Ctg_1130033 ID=Trimin1|352248|estExt_Genemark1.C_Ctg_1130033|Name=jgi.p|Trimin1|352248|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=753bp
MTSCALGQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREI
EDGRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVDGP
LKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRAD
VVAHVVNVLKADKQGYMDENALRRRIERAFDTLVQERFIVKVAPLDLTRP
SPPPTTGAQLKKMMDFSLPANARGRGKPGGGGGGGGAAGGDGGETGPPVA
VRKRKRVAQQPLDEDEDALPMEMQMMLDNARMLSGQGQLFDGGTSGGAAE
LRARQYDEDEAEFEDLPAAKSRAAHVRQYDEEEAEYDDLPAAKGCARADE
EEAEFEDLPAAKGGRGRGRGGKAIPAAGDAAAAAPAEAAAAAPPAAAALA
PAQAIGGAERSISETQSSTVWRVGHDQFHRLVRDSMGNKLAQDIMVELMK
LAAPMERSAHDSHSTPVAFIDKRDGFLSVSEAAFAYARAQLLRAMTTPLP
NNARLYRVGVGAPPSLPTAQTLRVFLQHFASGKMASVTESRLLRGSCNHK
HSVVALSALVVMFTTVVDKGEGAKFVINYANMIAFAQQRALHTFIADKYD
VPTARITRILLEKRYMEQQGITDEALLPQKETRSKLYTLYHDHLISMQEV
PRTASHEPKTTTYLWTVRPALMTATMVDNIEKALLNVRLRRQHLYATNRH
YIEHADKFNTMETKHRAKAKHCRHLTMLVGSLQRLSMAQLKLDETLMLFR
TF*

mRNA from alignment at Contig_113:266839..279681+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13190 ID=mRNA_13190|Name=jgi.p|Trimin1|352248|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12843bp|location=Sequence derived from alignment at Contig_113:266839..279681+ (Tribonema minus UTEX_B_3156 )
ATGACGAGCTGCGCTCTGGGGCAGCAGAAGCTGGCTCTTAATATCCTGGG
AGAGCACTTTGGGGACATCGTCAAGGTTGTCGCCCAGGCGCTGCTGAGGG
TGGACAAGGCCATGCTGGGTGACATCATCAGGTGAGTGGCCTTCTATCTT
CCCCTAATGGCATGTTGCGTTGAATCAGCAGCGGACCGCATCCTATCCAC
GGGATGCCCGGTCAATCGTTTCCAGTTTCTGATGTAACTTCAACAACGTG
CCCTCGATGCTGTTGGCTTCTCTCGCGCTGCTGCAGAGAACTGTAGTCAA
TGCTGTACACACACGCGTGTGCATAGCCTCTCAGTGTGCGTGGTTCTGCA
ATCATCTGAGCAAGTCATTGCTTTCGCAGGCGCGTCAAGCGGGAAATAGA
GGACGGGCGGCGGCGAGGGCCGGGCCCCCCCCTGCAGATCTCGGGCAAGC
AGGTCAAGAGCGCGCTGCTGGTGCTGTGCCAGCACAACTGCCTGGACGTG
ATCATGCAGACGGCGGAGGAGCTTCGCCGCTCCAAAGTGGACGGGCCGCT
CAAGCTGTACTACAAGTGAGCGCGCTACGCCGCTTGCTTGGATTAGCGCT
GCACTGCACACGTTTATACGCTCTGCCGGGGGGTGTAGACTGCTAAGGAA
TGCATGCACATTCTCCCTCTATTCTATGCGCTATGCACGTTGGGTGTCTG
CCATGCCCCCTGCACACGCGCCATGCGTGCGCCATTACCAACAGATTGTG
CGGCAGTGGCGTGCGTTATGGCGAGCGTGCACCAGCATGGCTCAGCGCCT
CTCCGTAATGCAGTGCTTGGCTTGTTGTGTCCCCGTCGCCAACACAGTCT
AATCGGCGACACCGCTCTGCCCGTGTGCCCGCGCTTGTTTGCATTTGGCC
AAGTGCCCCGTACGTGGCCCTGATGCTTGAGAGTAGGTATGCATCTTCCA
TGTAAGCAGAGCAGCGCATGCAATACCTGCCGCGTGCAGGCACCGCCACC
ACCGCGACCAAAACCACCGAACCCATCGCGCAAGAGGCAGTCATGGGCTC
CTGGCACAGACCTCGCGCTGGAAGCCACCCCTGCCATGCACCACATTCAC
TATACCACTGGCGCTCCCTGCCATGCGCGCAGGCTGCGTGTGTCGGAGTG
CATAGAGCGCCTGCGCGGCCCGCGCTTCGTGCACCTGGCCAGCGTCATGC
ACGGCGCGCTGGCGGCGGCGGTCGTGGAGGCGCTGCTGCTGCACGGCCGC
CTCTGCCGCGCAGACGTCGTCGCGCATGTGGTCAACGTGCTCAAGGCAGA
CAAGCAAGGTGAGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGC
GCGAGCAGTGCTGCTCGAAGCGCCAGAGCTGCGTTGCGTGCCGTCCTTCG
CACACATGCAGTGATCAGTGCGTTTTGTCGACGCTGCGCACGCGGTGATC
AGCGCGTTTTGCAGCCGCTGCTCTTGCTGCTGCTGCGGCTGCTGCTGTTG
CTGCTGCTGCTCGCTGCTGCTGCTGCTGCTGCTCGCTGCTGCTGCGGCTG
CTGCTGCGGCTGCGGCTGCTGCTGCTGCTGCCGCCGCTGCTGCTCTCGAG
TACACGAATGGCGGTCGCAGGCAGCGTGCACAAGGGGGGGGCGCAGATCC
TCACAGGCAAGCAATGCACGCCCCCCCGGATCAGATTACACGGTCGAAGC
GCCTGAGGACGAGCACCCCCCTTACGAGCTTCTGCAATGCGCACGGCGGC
GGAAGGGGCCCACGAGGCCATATGCACATCGAACAGCAGGCATAAAGTGC
AGGCCTTTTGCACCGCAGAGCTGGGGGTAGGGTACTGAAAAGCGCGAGCT
GAAAGACATGTACGGGCAACGAGTCATGACAGGTGTGCACCCCAGTGAGG
CCCAGCAAACTGTACCACCCCCCCCACACACACACACTCCACCCCGCCCC
GCCCACTCCCTTGCAACGCACCTCCAGTGTGAGGCCCAGCTAACTGTAAG
TAAACGCCGAGACCCCCCCCCCACCCCCTTGCACCCCCCTCCCCCCAAAT
CCCCCCCCCCGGAGCAGGCTACATGGACGAGAACGCGCTGCGGCGGCGCA
TCGAGCGCGCCTTCGACACGCTCGTCCAGGAGCGCTTCATCGTCAAGGTC
GCGCCGCTCGACCTCACGCGCCCCTCGCCCCCCCCCACGACGGGCGCGCA
GCTCAAGAAGATGATGGACTTCTCGCTGCCGGCGAACGCGCGCGGGCGGG
GGAAGCCGGGGGGGGGCGGCGGCGGCGGCGGCGCGGCAGGGGGGGATGGG
GGGGAGACGGGGCCGCCTGTCGCTGTGCGCAAGCGCAAGCGCGTCGCGCA
GCAGCCGCTGGACGAGGACGAGGATGTGAGTCGCTCTGCTAGGGTTTGGG
TTAGGGTTAGGGCTGGGATTTGGGTTGGGGTAGCCCTACCCTGGGGACCT
ATGAAGTGATCGCAGTAGGTTTAGGATTAGCCCTACCCTGAGAACCCATG
TAACAGAATGCAGTAGGAAGGGCTTGCTCTCTGAGAGCCCTCCAGCTGCG
CGACTGATTTGAGCTGAGACGCTTTCGTCCCATGACGCGGCTTCTGTGGG
AATGTCACTGAACCTGCGTGTCCAGATGCTTTTTTGAGACCTGGTGGCGA
TTTGACTGCATGCGCTGTGACGTTTTCAGCAGCGTGCTGCGCGTCTGGAT
CCGACAGCAACAGTGATCACGACCATGCGAAGTGTTGCGTCGGTCCAGCT
GAAGCTGCGCCGCAAATGGGTAAGCGAGCATCAGCACTGGTCATGGCTAC
CAAGATGACGCTCCGCTTCACCGCCAGCACCCAGTTGGTGCTTTGCTGAC
GACAGTGCGGAGCATCACCACCACCATCACGCACGGACAAAGCAGGTGAC
GCTCCGCACTTCAACAGCGCGGATCGTCATCATCGCCATTGTTGACATAC
GTGACACTCCACCGCCGCCGCCGATATCATCATTGCAACTTGCGAGTCGT
CATTGACGCCAATGCCGGCGACAATCGCTGCGGCGCTCTCAAGCTCCCGT
CCCAACTCCGCGCACGTGCGTCGCCGCAGGCGCTGCCCATGGAGATGCAG
ATGATGCTGGACAACGCGCGCATGCTCTCGGGTCAGGGGCAGTTGTTCGA
TGGCGGCACCAGCGGCGGCGCCGCCGAGCTGCGCGCGCGCCAGTACGACG
AGGACGAAGCGGAGTTTGAGGACCTGCCCGCCGCCAAGAGGTGCGTCGCC
GCGTGTGAAGTTGAAGTTTTTGTTGAAGTGCAGTTACACGTCGTGCTCTG
CCAGCCGAGCTGCGCGCGCGCCAGAACCACGAGGTTGCGCTCTGCCAGTC
GAGCTGCGCACGTGCGCCAGTACGACGAGGAGGAAGCGGAGTACGACGAC
CTGCCCGCCGCCAAGGGGTGCATGGCCCGCACGCGCAGTTGAAGTTTTTG
TTGAAGTGCAGTTAACCGTCGTGCTCTGCCAGTCGAGCTGCGCGCGCGCC
GACGAGGAGGAAGCGGAGTTCGAGGACCTGCCCGCCGCCAAGGGGTGCAT
GGCCCGCGCGTGCAGTTGAAGCTGCTGTTGAAGTGCGGTCCGCCGTCAGC
TATGCGAAGCGACAACGGCGGTTGCTCCGGTCGAAAGGTGTGCTTCAGGG
TGTCTGGTCGGCGGGTCGCCAAACGTGGAGCGTCGCAGTCGCTGTGAGAA
TGAGGCTTGCGTACGTGTCTAACCCTAAACCCTAACCCTAAGTAAGTAGA
TCTCTGGGAATGTGCCAACCTCATCCGCTGCTTCCCCTGTAATGGTGTGT
CCTGCCAGCTGATCACTGACACGCATGCGACTGATATGCCCTGTCAGCGC
TTCTTACCATTGACCAGTGTTGCAACGCAGAAGGTGCTGCTCACTGGCCC
CTTGTTCCACACCGTCAGAAACAGGCATCAAGCCAGTCGTGTGCCTCTAG
GAGTGATTGTATGTAGTCTGGCTACCGGCAAGTGTAACTGCTGTCACCGT
CAAGCGTGCAAAAGGCAAGGAGCATGTGACTGCATATGCCTTAACAGTCA
GTAACTGGCAGTACCTGCGGTGCTGCCCATGGCATTCGAAGCAAAGCGCC
ACAAGCTTGTGCGTGCGTGCCGCCGGCGGTTGCATGGCACTCCTTTGAGC
ACAGGAGCCATTGCGCGCGCCCGCATCCATTTCGCTGATCACAATCACAG
TTGGGCAGGTGGAACACAGAGCTGACCTGACAGCGCTTGCCTGTGAGGTA
TTGAGCTCGTGATCGCCACTTTACCAACTTCAATACGTGAACTCATGGTG
AGGTATATGTATATATGTGTGTATCGCTTGAGTGCAGGCCCCGTGGCGGC
TCCCGTGCGGCAACGCGCGGCGGCAGGGGCCGCGGTCGTGGAAGGGGCGG
CAAAGCCATCCCTGCAGCGGGCGACGCGGCTGCAGCAGCACCGGCGGAAG
CGGCAGCGGCGGCGCCGCCTGCGGCAGCAGCACTGGCACCAGCGCAGGCC
ATTGGTGAGCGCTGCTGCCTGAGCACACGAGCGCGATGCTCAGCGCGCGC
TGCTCATCTTTCTGGCTATTGTGCCATGGACCATCCGCTTGGCAATGTGG
TTGAACTCTGCGTAAGCCGTTGCACTGCAGTTAATGCTCGCGCTCTGGAT
GTTATTGATCAGCATGCCAGCAGCATGGCCCCTGCCCCCCCCCACCCCCC
ACCCCCCCAGCAAACATTCTGTATCGAGGGTGGAATGAGAGGTAGGCTCA
GAACACTGCCGCAGCGTGTGTGTTGTCGCACCTCAGCGTGACACTTGAGT
CAAGGTTTGGATCAGGATGAGGGTTGAGGTTAGGGTCTGAGCGCGTGTGC
CTCAGGGCTAGGGTAAGGGTTAGGATCAGGGTAAGGGCTGGTGCCTGAGG
TGGCATATACCGCTTTCTGCAAGTAATGAGGGTAGGGTTGGCTGTGTCAA
GGCGTAGACAGCAGTGCGTGCAGGGTGAGCAGAGCCAGACATGGCGCAAC
CCCTGGACTCGTCTATAGAAACGGTGCCTCAAATGGAGGAGGGGGTTTGT
ATCAGGGACAGGACGAAGATGGCAAAGAGAGTAGGGCCACGTCATGATAT
TGCACCGGCGCACGCAGGTAGGGTTTGCAGTTTGGGCAGGACAAAGATTA
AAGTCGAAGTTAGAATCACGTACGAGATTCCAACGGCGCAATTGCAGCAG
TGTCCTCACGCGTCAGGCACACGCGCGCCAGCTGCCATTGACGCTGCCCT
CACTCACGCGTTTAGAGGCACCCTCATTATTCTGAAGTGGTACCTGAAGT
AGTTGGGTATGTATGCATGTTGCGGGCGCTCGCAGCCGGCGCCGACCGGT
CCATGCCCGAGACGCATAGCTCTACGCATAGCTCTACCGTATTGCGCGTG
AGTCAACAATGCCACTGCAAATGCAAAAAATAAGTTGTACCTGGTGAGCA
GAATTGCCCGTACTGTCGTCGGCATGACCGCGTTGACACATAAACGGAAC
TTCAACCCATCCATATGTGTGATGGGCTGCATGCTTGCAGCCGGCGCCGA
ACGGTCCACCTCCGAGACGCATAGCTCTACCGTATTGCGGTGAGTCAACA
ACACCACTGCAACGCACGCCATCATATCTGGTGAACAAGGTTGCCGGTAA
CCACGGCATAACCGCGTTGACGCATCACCCTAACCCTGATTCCAATACTA
CATGTATCTGTGTGTTGGTGCAAATGCTGGCAGGCGGCGCCGAACGGTCC
ATCTCCGAGACGCAGAGCTCCACCGTCTGGCGCGTGGGGCACGACCAGTT
TCACAGGGTGCTCAGGCACGCCCTGTGTCTCAAGGCGAGTTACTCATCTC
ACAAGTGACTCATTTCACAAGTGACTCAACTCACAAGTGAATCATTACGT
ACCTACATCTGCTGCAGCGGATCTGACGGCATGTCGGCGCCTGTACATGA
AGTGCATGCGGTCAAGACTTTGAGACTTGCAGCTCCACATGGCTGCTTGC
AGCGTGTGTTCTTGTGTCAACAACATAGGCTCCTCAGTGTGGCCTTTCAT
GGATGAATATGCAGGCCTTAGCGTATGGACGTGGAGTGCGGAATGATGGT
AAGAATTGGGGTTTTACCTCCAGGACAGACAAAGGCCGTGGGTGTACGAA
CGCGCAGTGCAAATGTTGTGGCCAGAACCTGAGGTCAGGGTCGGGATAGA
CTTGAACTCAGGGCAAGGATAAGAATTTTGAGCGTTGAGGAAATCCCAAG
CATGCGTGGCACTGGAAAATTCCCAAGTCAACGCCCTGAGGCGCCGGCAG
AGCGAGGCGTTACGCTACCACACTCCTTCTCCTTTTTGCCACTTCAAGTC
TCTCACCCCTCTAGTCCCCCTTGATGGAGCAAGGAAAAGAAGACGTCCCG
GCAGCTCGAGCATCACTCCTAGCCCGCAAAAATGTCCAGCTTCGCTTTCC
ACTTCAGTCGCACGCTGTTGACGGCCGCGGAGTGTCACTGCTGCTGAAAC
GTTCAAAACATGCCCCACGCCAAAGTCGGTTGCTGACCCCCCCCCCCCCC
CCCTCCCGTCTCTTCATGGTCCAACCTCAACATCTGCCACTTGCAGTTGG
TGCGCGACTCCATGGGCAACAAGCTGGCGCAGGACATCATGGTGGAGCTC
ATGAAGCTGGCGGCGCCAATGGAGCGCTCCGCGCACGACTCGCACAGCAC
GCCGGTCGCGTTCATCGATGTGAGTGACGTGAATTCATGAATTCAGGAAT
TCATCGCTGCAGCGCAGATGCCGCAGAAGCGTGACGGCTTCCTAAGCGTG
TCAGAAGCGGCCTTCGCGTACGCGCGAGGTACAGGCCGTTTCGTTGTGAC
ATGTGTCCGCCGGCGCATTACGCTCCTCTCAATGTGTCCAGCAACATGTG
TCCGCCGGCACATTACGCTCCTCTCAATGTGTCCAGCAAGACAAGCGTGG
CCTGCATGTGTCAAGTTACAACCTCATTTTGCATGCATGGCAGTCCCAGC
CGCGCCGCGATGCCGGCGAATGAAATGCATGCAGCATGAAGATGAACATG
GATGACCTGGCTTGCGGGCGGGGGGCGTCTGTGCTGCACATGTCATTATC
TTGACGGGGAACGGGGAACGGCGTGTTGATGCTGGTCACAGAGAAGGCAG
CAAGTTTCCCCTAGCCACATCAAACGCAGTGCAATCGCCGCATGAGGCAC
TTTGGATGCAGCTCGAGTAGATTGTATGTAAGCAGTGCGAGCGGGTAGCT
CAGTGCAGCGGCGCTGCTTGACCGTATGCTTGTGCCTGCAGCACTGCTCC
AGCCCATGTACGCGCCAGAATACAACAACCACAATGTATTCAAAACAAGT
CGTGATTGTGAATGCTTGTGCATGTATGCCACACACATGACTCAACATAC
GCCTACACGCCCTTCCCACAACCTCAAACAGAGCAATAGTGCTTTCCCCC
CCCCCCTCCCCCCTTCTCACCCCCCCTTGCTGAGCGCAGCTGCTGCGCGC
CATGACCACGCCGCTGCCCAACAACGCGCGCCTGTACCGCGTTGGCGTGG
GCGCGCCGCCCTCCCTGCCCACCGCGCAGACGCTGCGCGTCTTCCTGCAG
CACTTTGCCAGCGGCAAGATGGCCAGCGTCACCGAGGTGAGTGAGTGAGT
GAGTGAGTGAGTGAACAGTGCAGCACTTTTGTCACCGGCAAGATGGCCAG
CATCACCAAGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGCGAGCACTTTG
CCACCGGCAAGATGGCCAGCGTCACGGAGGTGAGTATGTGAGTGAGTGAG
TGAGCGAGTGAGTGAGTGAGTGAGTGAGCACTTTGCCAGCGGCAAGATGG
CCAGCGTCACAGAGGTGAGCACGTGAGTGAGTAAGTGAGTGAGCACTTTG
CCACCGGCAAGATGGCCAGCGTCACCGAGGTAAGTGAGTGAAAGAGTGAG
TGAGTGAGTGAATGGCGCGCGTGCCGAGCGCTGATGTGCGCGTGGTGTGC
GTGCCGTTGAGCGCTGTGCTGCATGCGCATCGTTGAAGTTGAGGACTGCA
GGGCGAGCGCTGCTGCGGCATCTGCGCCACCAGCGGCGACGGCCGTTGCG
CACTGCGTTGCAAGTGAACGGGGCGTTGGTAGGGTTAGGGCGCTCCTCAT
AGCTTTGTCATTGCAAGAACCATTTCTGCTGCGCTGTGGTGCTGCCGCAG
CTTTGCAGACAGGTGTCTTTAGGGTTTGTTTGCGATCGTCACCCGCAGAG
CCGCCTGCTGCGAGGCTCCTGCAATCACAAACACTCAGTCGTCGCGCTCT
CAGCGCTCGTGGTCATGTTCACGACGGTACGCGGCAGCTCAGCGCAGCAC
ACGCTCGTCATGGCGTACGGCAACGTGCATCTAGCGCGGCCTGCGACAGT
TTTCCGTTTTGTGCATTTCCGACGCTGCAAGGCATGTCTCCATGTGTGTA
TGCTGCCAAGACGTATCTTTGCCGCTCGCGTTGGTGCCCTTGAACGCGTC
CTCGAATGGTTGCCTACATCTATGTCGCGACGCTGTGAGCTGCATCTTCA
TACGCATGCGTACGTGCCTGCCTCTCTGAGCAAACTGAAGAGCGCAGTGT
TTGCCTGTCAGGCCCGGAACCGGTCAAAGGGACGATGCCAACCCAAATGT
AGCGGCAAATCAGGACATGATAACCTTCCTTTCTGAACACCCATGCTTCG
AATGCTGAAGAGCTTGCAGGCAGAAGTCTTTCAACTTCTGTGGACATGGT
GGCACTGTTTGAAACGTGGCCAATTGCTGCAGCAGCGGCGACCACGGTTA
TTGATGGAAGGCACTCGCGGCTAACCACACCTTATCACCTAGAGCTCTAC
GATCTTTTGACTCGTTTCCATTATTCAAAACATGCTGTGCGCGTTCTGTT
GCGGTGCAGGTCGTCGACAAGGGCGAGGGCGCCAAGTTTGTCATCAACTA
CGCTAACATGATCGCGTTCGCGCAGCAGCGCGCGCTGCACACGTTCATCG
CCGACAAGTACGACGTCCCCACGGCGCGCATCACCAGGGTGAGTCGCTAC
TTCGACTAGTACTTCAATTAGTACTTCAAACTAGTAAACTTCAATTGGGG
ATCGGTGACACATATTGGCAGTAGTATCGTGGACTCCACGAGGCGTGTCC
AATTTAGTAGGTGTTGTGTACCTTATACTACTAATCGAACAGTTGACAGC
CTGCTGCCCAGCTTAGCCCCTGCATCGAGCTCGCTTGCGTTCCTAGGCAA
GTGTGCACCGTGCTAGGTGCACAGATGATACAACCTTGAGGTGTGTAAAG
CAACATTCGGAAGCCAGTACCCTGCCCAACGTTGCATATAGAAGTAACAA
CACTTAGAAGTATGCAACAACAAGGGATGTCAATGATTGGGCCAGTTCTT
GGCGATGCTAGCCATGGGTGCATGGCACTCATATTGACGGCACATGTGTG
CGGTCGCTGTCTGGAGCATGCTGCACCGCTGCCATGCCCGCAGCGCTGAT
ACGCATGGTTCTGACATGCCCGATACACTGCATCTGACAGTGAGCTCTGA
GTCAGGCGTCGGCTGATCGCGGCCCTGTAGGCGGACTCAGTTGTGAGCTT
GCTTGTTGCCGGTACCTCAGCTCATTCCCTCACGATGCTGCTGACTGCAT
AGTGTTGCAGTGCTCTCTCAGGCCCATCACCTACCTCATGGTGTTGTAGA
TCGCAGAGCGTTGCAGCGCTCATTTGCCTGCAGCTCTGATTCACACAGTG
TGTTGACCTACCGGCTTCACTGCGTTTGACGGTGAACTCTGTCATGCCCC
GCTCGCTGCGCACTGCCGCAGATCCTGCTCGAGAAGCGGTACATGGAGCA
GCAGGGCATCACTGACGAAGCGCTGCTGCCTCAGAAGGTCAGTTTTATGT
TGCCTAACCTTATAAGTAGGCCTCACCTACCCCTAATCCTGATTGTGGGT
GCACAGAAATGGTACTTGGAGCTGCGAGGCGTAATCTTCAACTCCAACCT
CAACTCTAGGCATCTTGGTTTTCGTGGGTCAACATAATATGTAGCTAGTG
CTGAAGACGCGCAGCGTGGTGACTTCTGCTGCCTCAGAAGGTCTGTCATT
ACCTGCCCCCACACTCTGTGTGCTATTCTCAGCCCTAGTCTGACTGTGGT
GCACAGACATCAAATCTGGTGCGGAAGCCGCGCAGCGCGGCCTGCGCTCT
GACCCTAAGCCTAGCCCTACCCTCATCATGGGTAAACAGAATTTGATTTT
TGGTGCGCACGCACATCACGTGGACTCTCCCCAGTGCTCAGCAGATGCCT
GCTGTGCTGTTGCACATTGCCCTATCGCCCCGCCTTGCCTGCTGCAGCCA
ACGCTGCCGGACCCATCTTGTGATCGTGCTCGCTTGTGGCGCCTTTGCTG
CAACCTCTTGTGACCTACCGCAAGTCGCCGTCGGCGTCACACAATGCACC
CCAGTTCTTGCATCATGAACTGGACTGCTGCAGCAGATCACCAGCGAGCT
GTGCTACGCTCACCTAGTGTTCGGTGGGTCAACTTCTTCAGTTCTGTGCT
TCGATATGCTGGCGGAATTTGTTCTAGGCCTGCGCGACCAACGCCTGGTG
TCGATGACAATACCAACGTTATCGCCAATACGTAGGGCTAAGATCAGGGT
CAATCGCATCGTGCGTTTTTCTGCCGTGCCTCAGCTCTGTCACCGCTCTG
AATGCAACTGCGTGATTGCTGCCATGCTTGCTCGGCGCCATGATGCTGAT
GCTTTGCACTGCCGGCCGCGCTGATGCTCGCTTTTGTCCTATGTAAGGCC
AAGGTGTCAGAATGACTGCCCGTGCTTGGAATGATTGATGCCAATGTGGC
AGTTGCGCTCTGCCACTGCAATCCAATGGTTCGCTGCAATGCTCACTCCC
CGCGCCGCCCGGCTGCATTGCGCGCTGGCGCAGGAAACGCGCAGCAAGCT
GTACACGCTGTACCACGACCACCTGATCTCCATGCAGGAGGTGCCGCGCA
CCGCGTCGCACGAGCCCAAGACGACCACCTACCTGTGGACCGTGCGGGTA
CGTATTTAACAGGACGTGTTGATTGTATGCTGAAGGTGCCCCGCACCGCG
ACGCACGAGCCCCTAAGACAACCAGCTATCTGTGGAGTGTCCGGGGGTAT
GTCACCTAGAGCTTCACAATCTTTGATTCGTTTCCATGTACCCTGAAATA
TGTTTGTTTTGGGAGGGGGGGGGGGGGGGGATAGGGGAACTCGCTCAGCT
CATGACAAACATCTGCGCCGCTGACTGGAGGCCCGTAACATCCCTGTCTT
GCGTCGGTGCGCAGTTTGCTGGTTTCTCCCATCAGGAGCCTGAGCCCTGC
CACGCTTGCACACTCTGATGGTGTGATTCTCATCCCCTGTGGTACGCTGC
TCCTCAAGATGCCAGAGTTTTCAGCAAGCGCCGCTTCCGGCTGCAAAGCA
GCGTCGATGGCAGGGAAAGCCGCGACTCTTTGATTGCTTACTGTTTCACA
TCCTATAAAGTTGATTATTGATAGTCGAGTATCATGGCAATGCATTGGAT
CGCAAATCCTAGAGTAGCGGTTCATGCAAACAACGACGGAGACAGCGCTC
AGTTCTGGGATCTGCACGTTGTGCGTGCCGCTCGTGCAGCCTGCGCTCAT
GACGGCGACCATGGTGGACAACATTGAGAAGGCATTGCTCAACGTGCGCC
TGCGGCGGCAGCACCTGTACGCCACCAATCGCCACTACATTGAGCACGCG
GACAAGTTCAACACCATGGAGACCAAGCACCGCGCAAAGGCAAGTCTCAC
TGCGATGTGTTGCATGCCCTGGCACTCTGTAGGGGTCTGGCAGCCATTTA
TAGCCGCGGGCTTGCCTGCCCTGGTGTGCAATTATGGTTTTTGATTACCA
GGTTCCACTTTACATCTTTTCCACCACCAAATATGGCATTTTTGGGGGCC
TGGGAGCCTCCATGGGGTGCGAGTGCACTGCTGCCATGCATTTACGCATA
TGATTCAATCTATTCAAAGGGAGTGGTTGATTGAAGTTCTTTGAAGTGCG
TACTCGCAATGGTTGCGATTGTCAAAATGGACGCTCGGCTTTGCATGTTT
GAACAGGCTTACAAACAGTCATTCTATTTGAATGTACTCCTAGTCTCTCT
GTGTGCCTCCCCAGCAGCGACGCAGAATCATGTACCCTACAATAAAGCAA
GAAGTAACTCCAAAGTATTACAAGCGCGTCTAGCTCACGTCAAGAGCTTG
CATTGTGTGGGATCGAAGAACCCACATGCTGTCAACATAACCTGTGGCAT
AGTAGCCTCATGCTTGAGATTGGCACCCGCGAGTTGGCACAAAGACAGCA
GTGGGGGCAAATCCTGTACCGATAGAGACATGCCAGTCCTTTGCGATAGA
TGCTGTATGCATGGTAAAGCTAAAGTTGACAGTGCGGTTCAGGCCCAGCC
ACACCAGCAAACCCAAGCAGCACACGTCGCTCACCACCGCGTTTTTCTAC
GTATTGTCCTTGTTCATTGAGAAGTCCGCAGTTACTATCACATACTCCCT
TTATTATCATTAGCCTGGTCTTATCGGGCAACCTCAACATGGCAGCGCTC
ACCCGTGATGTGACTTGCCGAACTCAGAGCACTGCCGCCACCTGACCATG
GTACGGCACCGCTGCATCTGATCCCTCACTCTTGTGTGCGCGCTGCCTGC
CGTGCGCGCAGCTAGTGGGGAGTCTGCAGCGCCTGTCGATGGCCCAGCTC
AAACTCGACGAGACGCTCATGCTCTTCAGGACGTTCTAGGCGC

Coding sequence (CDS) from alignment at Contig_113:266839..279681+

>mRNA_13190 ID=mRNA_13190|Name=jgi.p|Trimin1|352248|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2259bp|location=Sequence derived from alignment at Contig_113:266839..279681+ (Tribonema minus UTEX_B_3156 )
ATGACGAGCTGCGCTCTGGGGCAGCAGAAGCTGGCTCTTAATATCCTGGG
AGAGCACTTTGGGGACATCGTCAAGGTTGTCGCCCAGGCGCTGCTGAGGG
TGGACAAGGCCATGCTGGGTGACATCATCAGGCGCGTCAAGCGGGAAATA
GAGGACGGGCGGCGGCGAGGGCCGGGCCCCCCCCTGCAGATCTCGGGCAA
GCAGGTCAAGAGCGCGCTGCTGGTGCTGTGCCAGCACAACTGCCTGGACG
TGATCATGCAGACGGCGGAGGAGCTTCGCCGCTCCAAAGTGGACGGGCCG
CTCAAGCTGTACTACAAGCTGCGTGTGTCGGAGTGCATAGAGCGCCTGCG
CGGCCCGCGCTTCGTGCACCTGGCCAGCGTCATGCACGGCGCGCTGGCGG
CGGCGGTCGTGGAGGCGCTGCTGCTGCACGGCCGCCTCTGCCGCGCAGAC
GTCGTCGCGCATGTGGTCAACGTGCTCAAGGCAGACAAGCAAGGCTACAT
GGACGAGAACGCGCTGCGGCGGCGCATCGAGCGCGCCTTCGACACGCTCG
TCCAGGAGCGCTTCATCGTCAAGGTCGCGCCGCTCGACCTCACGCGCCCC
TCGCCCCCCCCCACGACGGGCGCGCAGCTCAAGAAGATGATGGACTTCTC
GCTGCCGGCGAACGCGCGCGGGCGGGGGAAGCCGGGGGGGGGCGGCGGCG
GCGGCGGCGCGGCAGGGGGGGATGGGGGGGAGACGGGGCCGCCTGTCGCT
GTGCGCAAGCGCAAGCGCGTCGCGCAGCAGCCGCTGGACGAGGACGAGGA
TGCGCTGCCCATGGAGATGCAGATGATGCTGGACAACGCGCGCATGCTCT
CGGGTCAGGGGCAGTTGTTCGATGGCGGCACCAGCGGCGGCGCCGCCGAG
CTGCGCGCGCGCCAGTACGACGAGGACGAAGCGGAGTTTGAGGACCTGCC
CGCCGCCAAGAGTCGAGCTGCGCACGTGCGCCAGTACGACGAGGAGGAAG
CGGAGTACGACGACCTGCCCGCCGCCAAGGGCTGCGCGCGCGCCGACGAG
GAGGAAGCGGAGTTCGAGGACCTGCCCGCCGCCAAGGGGGGCCGCGGTCG
TGGAAGGGGCGGCAAAGCCATCCCTGCAGCGGGCGACGCGGCTGCAGCAG
CACCGGCGGAAGCGGCAGCGGCGGCGCCGCCTGCGGCAGCAGCACTGGCA
CCAGCGCAGGCCATTGGCGGCGCCGAACGGTCCATCTCCGAGACGCAGAG
CTCCACCGTCTGGCGCGTGGGGCACGACCAGTTTCACAGGTTGGTGCGCG
ACTCCATGGGCAACAAGCTGGCGCAGGACATCATGGTGGAGCTCATGAAG
CTGGCGGCGCCAATGGAGCGCTCCGCGCACGACTCGCACAGCACGCCGGT
CGCGTTCATCGATAAGCGTGACGGCTTCCTAAGCGTGTCAGAAGCGGCCT
TCGCGTACGCGCGAGCGCAGCTGCTGCGCGCCATGACCACGCCGCTGCCC
AACAACGCGCGCCTGTACCGCGTTGGCGTGGGCGCGCCGCCCTCCCTGCC
CACCGCGCAGACGCTGCGCGTCTTCCTGCAGCACTTTGCCAGCGGCAAGA
TGGCCAGCGTCACCGAGAGCCGCCTGCTGCGAGGCTCCTGCAATCACAAA
CACTCAGTCGTCGCGCTCTCAGCGCTCGTGGTCATGTTCACGACGGTCGT
CGACAAGGGCGAGGGCGCCAAGTTTGTCATCAACTACGCTAACATGATCG
CGTTCGCGCAGCAGCGCGCGCTGCACACGTTCATCGCCGACAAGTACGAC
GTCCCCACGGCGCGCATCACCAGGATCCTGCTCGAGAAGCGGTACATGGA
GCAGCAGGGCATCACTGACGAAGCGCTGCTGCCTCAGAAGGAAACGCGCA
GCAAGCTGTACACGCTGTACCACGACCACCTGATCTCCATGCAGGAGGTG
CCGCGCACCGCGTCGCACGAGCCCAAGACGACCACCTACCTGTGGACCGT
GCGGCCTGCGCTCATGACGGCGACCATGGTGGACAACATTGAGAAGGCAT
TGCTCAACGTGCGCCTGCGGCGGCAGCACCTGTACGCCACCAATCGCCAC
TACATTGAGCACGCGGACAAGTTCAACACCATGGAGACCAAGCACCGCGC
AAAGGCAAAGCACTGCCGCCACCTGACCATGCTAGTGGGGAGTCTGCAGC
GCCTGTCGATGGCCCAGCTCAAACTCGACGAGACGCTCATGCTCTTCAGG
ACGTTCTAG