mRNA_13173 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A835ZJ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ00_9STRA) HSP 1 Score: 1207 bits (3124), Expect = 0.000e+0 Identity = 796/796 (100.00%), Postives = 796/796 (100.00%), Query Frame = 1
Query: 1 MRASLGSIPLLCLVACTPGHAFTAPSTRLVAGGFGRSLQRACSSAAPSAVSSRACRVRMALREQPVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDAARRAVAPLTNALTGQKSKPKAXXXXXXXXXQPVXXXXXXXXXXVTSPAPAKPAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPAXXXXXXXXXXXXXXXXXXXAQSKAAXXXXXXXXXXXXXXXXKPAPKPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPPAKPSKFAXXXXXXXXXXXXXXXAKPAFRKAGPVAKAAAXXAEPVKPLPPQPKTGGGLFGFGGGAGTAPRKDPVATATKVVAGATGTAKSATPAKPAAKPFAAPKPAPTKPAPAGKPAAAAFAFGDKLEAELSAKLGAGGVEALRKRTEQYVRGAISARDYLGTLRRAGIDNAIPDIVGALPAGSQRSALFSLYSTS 2388
MRASLGSIPLLCLVACTPGHAFTAPSTRLVAGGFGRSLQRACSSAAPSAVSSRACRVRMALREQPVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDAARRAVAPLTNALTGQKSKPKAXXXXXXXXXQPVXXXXXXXXXXVTSPAPAKPAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPAXXXXXXXXXXXXXXXXXXXAQSKAAXXXXXXXXXXXXXXXXKPAPKPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPPAKPSKFAXXXXXXXXXXXXXXXAKPAFRKAGPVAKAAAXXAEPVKPLPPQPKTGGGLFGFGGGAGTAPRKDPVATATKVVAGATGTAKSATPAKPAAKPFAAPKPAPTKPAPAGKPAAAAFAFGDKLEAELSAKLGAGGVEALRKRTEQYVRGAISARDYLGTLRRAGIDNAIPDIVGALPAGSQRSALFSLYSTS
Sbjct: 1 MRASLGSIPLLCLVACTPGHAFTAPSTRLVAGGFGRSLQRACSSAAPSAVSSRACRVRMALREQPVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDAARRAVAPLTNALTGQKSKPKAXXXXXXXXXQPVXXXXXXXXXXVTSPAPAKPAAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKPAXXXXXXXXXXXXXXXXXXXAQSKAAXXXXXXXXXXXXXXXXKPAPKPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPPAKPSKFAXXXXXXXXXXXXXXXAKPAFRKAGPVAKAAAXXAEPVKPLPPQPKTGGGLFGFGGGAGTAPRKDPVATATKVVAGATGTAKSATPAKPAAKPFAAPKPAPTKPAPAGKPAAAAFAFGDKLEAELSAKLGAGGVEALRKRTEQYVRGAISARDYLGTLRRAGIDNAIPDIVGALPAGSQRSALFSLYSTS 796
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: D7FSC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSC2_ECTSI) HSP 1 Score: 259 bits (663), Expect = 8.670e-72 Identity = 161/393 (40.97%), Postives = 218/393 (55.47%), Query Frame = 1
Query: 181 LREQPVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKE----YGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDA-TGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVG--PGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDAARRAVAPLTNALTGQKSKPKA 1338
L EQPVS +EA L++KAK +VE++MG+ +L DF L F +++A YL E Y L ALPDL WN++D+RVD++N RV T RL+GTH G L + + P+ RVE PE VSV FD +G +T GF +DR VGN G A G+WGVL A+G PVSA++ PP +V+ DV +FRP + P + + + LA+QV A D +A LL+DD M P +GPLKKK ++ V G+ D +D R+DPF+P+RVW T G + P ++F + SVTF+ GF SKIT G MD E G T GL + G+L G+G PLP RPA D+ RR L++ +K P A
Sbjct: 9 LEEQPVSADEAIALIDKAKTIVEADMGVKVADMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRT--ALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCIDRGVGNTGPAGGIWGVLQAIGEPVSAWKYFPPVKVLVDVLGPTFRPKGSQGKAKAPYRDSVAIALAKQVLTALRDDTGALADLLADDCMIYAPILGPLKKKEIVQSATVDLVDFFSGL-DTDDNYHDARVDPFEPSRVWITTIPTTKVVGATTCFGTKFEPKRQSFVSTPQTFSVTFDSDGFASKITLGCPMDTEVGDTEGLTNFQGILAGLGIPLPDPFGRPAPDSFRRV---LSSVFPKKKPAPPA 395
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A4D9CN00_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CN00_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.220e-70 Identity = 147/347 (42.36%), Postives = 202/347 (58.21%), Query Frame = 1
Query: 223 VEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRP 1263
++ AK V++ GL +PSL++D F + R T SK YLK L L A PDL AHDFRVD+ +A +V T R++GTH+ L K ++ PT ++EL PES V A+ G +DRSVGN G G++GV AALG PVSAF+ PP +V D F R+F+P+ PLPE +M+GLA+ + + G AD LL+ DF ++ P VGPL ++ ++K ++ + PD++ E YDFR+DP+DPARVW+T R+ GT T L P + E SVTFN +G K+T G +MDP+DG TGGL G+L +G PLP TRP
Sbjct: 60 IQVAKKWVQAGCGLEDPSLMADGFKFVDPLRGTQSKQAYLKNLERLDLQSAFPDLDLRAHDFRVDKEDASKVWYTTRVTGTHKFPLVLEKEEIAPTGIKMELPPESNCVVVKDGKVVRAVGGGIVLDRSVGNSAGLGGLYGVAAALGRPVSAFKHTPPQKVFQDFFRRTFKPSTAAPPVFSPLPEAVMIGLAKGLLASDFG-AAD-PELLAKDFKFVGPLVGPLPRETFVKAFSSFNLRRAFPDIKNEAYDFRVDPYDPARVWFTVRSLGTFTGAFGEGRNSLPPNGNKYLSGPEGISVTFNSQGQCVKLTVGVLMDPDDGDTGGLGGVFGVLFAVGTPLPPFVTRP 404
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S4JBK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBK8_9STRA) HSP 1 Score: 222 bits (565), Expect = 1.180e-57 Identity = 144/371 (38.81%), Postives = 197/371 (53.10%), Query Frame = 1
Query: 220 LVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPT-----LSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDA-TGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPA----GDAARRAVAPLT 1302
L +A+AVV S++G+ +PSLL+ + + L + +YL L A PDL + AHD+R+D + V +T R GT RG L L P R+ PE++SV FD TG+ L +G MDR VGN G +GV + GAP S +E PP+ VV F RS + P S P PE +M+ LA+ V A G A LLS DF + P VGP+ K ++K ++ PDL + +FR+DP+DP RVW AR +GTNT + A PT ++ P EA S TF+ GF +++TAG VMDP +G TGGL G+ +GRPLP +TRP G RR ++P T
Sbjct: 124 LFARARAVVASDLGVRDPSLLASEGQFRWIGPDAEGTGALGREEYLAAGKFFDLRSAFPDLDYRAHDYRLDDKDPYTVRVTARTVGTMRGELRLRSETLPPNGKRLSCPPETISVTFDPITGKATKLVSGMVMDRLVGNTAGLSGVMAAASVAGAPPSDWEIYPPSAVVARFFGRSVKQLDEPRSVLAPFPETVMIQLAKGVIAADNG--ASDPDLLSPDFSFCGPIVGPIPKDDFVKAFGDFKLKEAFPDLDQGMTNFRVDPYDPYRVWADARGSGTNTGSL----AGGEPTGMSYNGPPEAVSFTFDDDGFCTRLTAGAVMDPSEGNTGGLGGVFGIFYAVGRPLPGLATRPLSQNLGRIQRRILSPFT 488
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S2NW89_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NW89_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.540e-57 Identity = 141/357 (39.50%), Postives = 195/357 (54.62%), Query Frame = 1
Query: 199 SEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRP-TLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFD-ATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRP 1263
+++E +LV +AK+V+ S++G+++P+LLS DF + L+K YL L A PDL + AHDFR+D + + LT R GT RG L K L P R+ PE++S+ FD TG+ L +GF MDR VGN G GV G G+P S +E PP+ VV F R+ R + P P PE +M+ LA+ V A G A LL+ F + P VGPL K+ ++K ++ PDL+ +FR+DP+DP RVW A+ +GTNT I K PT +E P EA S TF+ GF +++TAG VMDP G TGGL G+ +G P P + RP
Sbjct: 62 NDDEIGSLVSRAKSVLASDLGVNDPNLLSADFVWVGPGDDRVLNKDDYLAAGKFFDLRAAFPDLDYRAHDFRLDENDPMTIRLTARTVGTMRGELRLRKEVLPPNGKRMVCPPEAISITFDQTTGKVLKLCSGFTMDRLVGNTKGLCGVKGAAVIAGSPPSEWEIYPPSTVVTRFFGRTVRQVEEPEGFLAPFPETVMIQLAKGVIAADNG--ASDPDLLAPTFTFCGPIVGPLDKETFVKAFGNFKLKDAFPDLESGFTNFRVDPYDPYRVWVDAKGSGTNTGSFIGK----EPTGIRYEGPPEAASFTFDDDGFCTRLTAGAVMDPTQGNTGGLGGAFGIAYAVGLPFPEWAARP 412
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S3QJP9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJP9_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.080e-53 Identity = 138/385 (35.84%), Postives = 199/385 (51.69%), Query Frame = 1
Query: 193 PVSEEEATTLVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPT------LSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDA-TGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQ--GPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDAARRAVAPLTNALTGQ 1320
P+ +A L +A++++ S++GLS+PS L+DD Q P L+K +YL L PDL + AHDFR+D + V T R GT RG L LEP R++ PE++S+ FD +G+ L +GF MDR VGN GG GV G P S +E PP+ V+ F RS + + P++ P PE +M+ L++ V A++G LL +DF + P VGPL K+ +L+ ++ PDLQ +FR+DP+DP RVWY + GT T P+ K P + P E S+TF+ GF +++TAG V+DP D TGGL G+ G LP ++RP RA T+ G+
Sbjct: 82 PMMSNDAEALFSRARSIIASDLGLSDPSFLADD-DKFQWVGPNVISTGVLAKDEYLAAGKFFNLRSTFPDLDYRAHDFRLDPRDPLTVRFTARTVGTMRGELRLRSETLEPNGVRMQCPPEAISMTFDRDSGKLTKLCSGFVMDRLVGNTGGLCGVQAAATVAGKPPSEWEVYPPSAVLARFFGRSVKQLQEPSNKVFLAPFPETVMIQLSKGVLAAEIG--TKDPDLLGEDFTFCGPIVGPLDKRTFLEAFEGFKLKDAFPDLQENYANFRVDPYDPYRVWYDTKGEGTWTGPLNGK----EPDGSRYIGPPEIGSMTFDDNGFCTRLTAGAVVDPTDCNTGGLGGVFGIFYATGNALPGLASRPLPQIIARAQKAATSIFNGK 459
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S2XK70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XK70_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.230e-53 Identity = 132/350 (37.71%), Postives = 192/350 (54.86%), Query Frame = 1
Query: 220 LVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPT-LSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFD-ATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRP 1263
L+ +AKAV+ +++G+ PSLL+D+ + + + + L K+ Y+ L A PDL + AHDFR+ + V LT R GT RG L L P R+ PE++S+ FD A+G+ L +GF MDR VGN G G+ G+P S +E PPA V+ F R+ + P + P PE +M+ LA+ V A G AD LL+ F + P VGPL K A+++ ++ ++ PDL +L +FR+DP+DP RVW AR +GT T ++ G + P + +E P EA S+TF+ GF ++TAG VMDP G TGGL G+ P P + RP
Sbjct: 93 LIGRAKAVLAADLGIRAPSLLADNDAFIWIGPNSFLGKSDYVAAGKFFDLRAAFPDLDYRAHDFRIVESDPCTVRLTARAVGTMRGELRLRTETLPPNGKRMICPPEAISMTFDDASGQLTKLCSGFTMDRLVGNTAGLCGIQAGAVVAGSPPSEWEIYPPASVISRFFGRTVKQIPEPTTFLAPFPETVMVQLAKGVIAADNG-AAD-PDLLAPSFTFCGPIVGPLPKDAFVEAFSSFKLKDAFPDLGQDLSNFRVDPYDPNRVWVDARGSGTRTG--VLLGNE--PNGKRYEGPPEAVSLTFDDDGFCMRLTAGVVMDPSIGNTGGLGGVFGIFYATDFPFPGWNARP 436
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S2E6Z6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6Z6_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.470e-44 Identity = 104/276 (37.68%), Postives = 146/276 (52.90%), Query Frame = 1
Query: 436 VHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDA-TGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTR 1260
V T R GT RG L + P R+ PE++S+ F+ TG+ L +GF MDR VGN G G+ GAP S +E PP V+ F R+ + P S P PE +M+ LA+ + A+LG LLS F + P VGP+ K+ ++++ + + PDL + +FR+DP+DP RVW AR +GT T P+ K P +E P EA S TF+ GF +++TAG V+DP G TGGL G+ +G PLP +TR
Sbjct: 2 VRFTTRTVGTMRGELRLRTDTVSPNGKRMRCPPEAISLTFNPQTGKLTKLVSGFTMDRLVGNTAGLCGIMAAATIAGAPPSEWEIYPPLSVINRFFGRTVSQLEEPTSFLAPFPESVMIQLAKGLIAAELG--TKDPDLLSGGFTFCGPIVGPINKEDFVRQFSGFDLKSAFPDLDQKYENFRVDPYDPYRVWVDARGSGTWTGPLNGK----EPNGARYEGPLEAVSFTFDDDGFCTRLTAGAVIDPTMGNTGGLGGVFGIFYAVGAPLPAAATR 271
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7S1UKY9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UKY9_9STRA) HSP 1 Score: 180 bits (456), Expect = 6.150e-44 Identity = 127/355 (35.77%), Postives = 171/355 (48.17%), Query Frame = 1
Query: 229 KAKAVVESNMGLSNPSLLSDDFSLL--QLFRPTLSKAQYLKEYGALGLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFD-ATGRCAALTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKEKAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLAPTNRTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLL-----EGIG---RPLPVTSTR 1260
+AK V+ +++G+ +PSLL DDF L + L K ++ L A PDL + AHDFRVD V T R GT RG L T L P ++ PE++S+ FD TG+ L +GF MDR VGN G GV GAP S +E PP V+G + R + P S P PE +M+ L + + A++ LL F Y EPF GP+ K YL+ A++ G D + EL +FR+DP+DP RVW R P+N P +A S TF+ G+ ++T VMDP G GGL AG+ G+G RPLP R
Sbjct: 2 RAKIVLAADLGVQDPSLLDDDFVWLGPTVGSSVLGKQDFVAAGKFFDLRAAFPDLDYRAHDFRVDIQEPLTVRFTARTIGTMRGELRLRNTVLAPNGKFMQCPPEAISITFDEGTGKVTKLCSGFSMDRLVGNTNGLCGVMAAATIGGAPPSDWEIYPPTAVIGRILGRPVQQLAEPGSFLAPFPESVMIQLTKGIFAARMASMDP--DLLGPSFTYCEPFEGPVGKDEYLERYASSMFG----DSEPELSNFRVDPYDPYRVWIDIR-----------------PSN----CPPQAMSFTFDDDGYCIRLTGAAVMDPSIGNAGGLGGVAGIKYSSGETGVGITSRPLPQVLAR 329
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Match: A0A7R9U779_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U779_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.800e-43 Identity = 128/365 (35.07%), Postives = 182/365 (49.86%), Query Frame = 1
Query: 220 LVEKAKAVVESNMGLSNPSLLSDDFSLLQLFRPTLSKAQYLKEYGAL-GLDRALPDLQWNAHDFRVDRFNARRVHLTVRLSGTHRGVLSYGKTDLEPTFTRVELGPESVSVEFDATGRCAA-LTTGFPMDRSVGNGGGAAGVWGVLAALGAPVSAFERLPPARVVGDVFARSFRPAKGPASPQGPLPEPIMLGLARQVAVAQLGDCADIATLLSDDFMYLEPFVGPLKKKAYLKE--------KAATQVGPGVPDLQLELYDFRIDPFDPARVWYTARAAGTNTKPVIVKGAQLA--PTN-RTFELPAEACSVTFNPKGFVSKITAGYVMDPEDGTTGGLVSTAGLLEGIGRPLPVTSTRPAGDA 1275
++E+AK+ + ++ GL P LL+++ L T SK Y+KE L G +A PDLQ HD RVD ++ +V T R GTH +S G PT E PE SV FDA G+ +T F +DR VG GG G +G +A+GA + PP ++V DVF R+ +P K + P P+M+ LA+ + G D LS DF + P+ GPL K+ Y + KAA PG D+ + D+R+D +DPARVW T R +T + G + PT+ + + EA S +FN +G + T G VMD G T GL G+ +G+P+ TR G A
Sbjct: 40 VIEQAKSFITADFGLQAPELLAENVLLRTPSAVTRSKNAYVKELSTLLGSWQAFPDLQLRVHDVRVDDVDSNKVWFTTRALGTHTKTVSIGGERFPPTGAVYEAPPEVYSVTFDADGKTVVRVTANFVVDRKVGTTGGLGGYYGAFSAIGASIPVLSTKPPLQLVTDVFERTQKPLKYTPPRRSPFEAPVMVSLAKSFLASSEGVDTDT---LSRDFRFYTPYEGPLNKRQYKRRFEGRPDSFKAAF---PGY-DILDDTSDWRVDLYDPARVWCTLRRKCKHTGDDLQLGGAVGRIPTSGKEIDGAPEALSFSFNEQGLCFRYTTGAVMDSGVGNTEGLAGDLGIAAALGKPVTPLLTRTIGQA 397 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352235 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13173 ID=mRNA_13173|Name=jgi.p|Trimin1|352235|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2595bp|location=Sequence derived from alignment at Contig_113:137646..148226+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGGCCTCGCTAGGCAGCATACCGCTGCTGTGCCTCGTGGCCTGCACback to top protein sequence of jgi.p|Trimin1|352235 >Trimin1|352235|estExt_Genemark1.C_Ctg_1130015 ID=Trimin1|352235|estExt_Genemark1.C_Ctg_1130015|Name=jgi.p|Trimin1|352235|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=797bp MRASLGSIPLLCLVACTPGHAFTAPSTRLVAGGFGRSLQRACSSAAPSAVback to top mRNA from alignment at Contig_113:137646..148226+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13173 ID=mRNA_13173|Name=jgi.p|Trimin1|352235|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10581bp|location=Sequence derived from alignment at Contig_113:137646..148226+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_113:137646..148226+ >mRNA_13173 ID=mRNA_13173|Name=jgi.p|Trimin1|352235|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2391bp|location=Sequence derived from alignment at Contig_113:137646..148226+ (Tribonema minus UTEX_B_3156 )back to top |