mRNA_13160 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA) HSP 1 Score: 1196 bits (3094), Expect = 0.000e+0 Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 1
Query: 1 MASTTPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDAARALRAALRAKDDATRKATLAXXXXXXLAQRPQLAXXXXXXXXXXXXXXXXXXXXXXXXXEAAVGGEGDLLEQEWEGEXXXXXXXXXXXXXXXXXXXYAKLSDAAKAEXXXXXXXXKRPATRDFFVLEPVVPQWRRAALEAAGQAKRVRIQLLPPAPAQAASR 1974
MASTTPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDAARALRAALRAKDDATRKATLAXXXXXXLAQRPQLAXXXXXXXXXXXXXXXXXXXXXXXXXEAAVGGEGDLLEQEWEGEXXXXXXXXXXXXXXXXXXXYAKLSDAAKAEXXXXXXXXKRPATRDFFVLEPVVPQWRRAALEAAGQAKRVRIQLLPPAPAQAASR
Sbjct: 1 MASTTPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDAARALRAALRAKDDATRKATLAXXXXXXLAQRPQLAXXXXXXXXXXXXXXXXXXXXXXXXXEAAVGGEGDLLEQEWEGEXXXXXXXXXXXXXXXXXXXYAKLSDAAKAEXXXXXXXXKRPATRDFFVLEPVVPQWRRAALEAAGQAKRVRIQLLPPAPAQAASR 658
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A6H5JKW8_9PHAE (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE) HSP 1 Score: 518 bits (1334), Expect = 2.670e-172 Identity = 262/498 (52.61%), Postives = 335/498 (67.27%), Query Frame = 1
Query: 4 ASTTPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFE-ES---ATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDA 1485
A P+P+ + IN P+ D DAKL ++ NVPVM+ ++ RE+VL ++ +F +WV ++ L G+ EE A+AAGG I TSGSYRL IHEP SDIDA C+AP CT FFT+L++ L HP V N NAI+TAAVPI+ FD ++IDLGL CLPV +V +IDDD VL GVD TEKC+NGPRVTN+IHRLVPNY SFLPVVR VR WAK RG+Y NKMGYLGGVNFNI+VAFACQ+YP A PS LL FFK+M W WPN I L +P+DA LGL+VW A N WH MPIITPAYP MNSS VS +L+VM EF RG + ++ +++ +L PS+FF Y+HYLA+D+MA EEE R W G++ESR+RKL++ +P + +HL+P+ F+ C GGV GELPAH V +F+G +D R G LDV +F ES AT + + GM + TA S+K LP + + +GG +A
Sbjct: 21 AGHVPRPM--YEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVLDGVDRPTEKCVNGPRVTNMIHRLVPNYDSFLPVVRCVRKWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSEEEHRAWVGWVESRLRKLVEGLGLSGLPFKRVHLWPKKFEGCVGGGVGGELPAHSVAYFIGLEIDPRRSKKGAVLDVDKVTNRFRMESVGHATSRGFHRPGMDVMATAKSWKDLPGFVFESIGGSEA 516
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A8K1CSA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSA9_PYTOL) HSP 1 Score: 437 bits (1123), Expect = 3.690e-141 Identity = 230/497 (46.28%), Postives = 315/497 (63.38%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCS--GGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEG--MCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP KD KL Y+ + S + + R +L ++ F+ WV++ CLAKGVPEE+A AGG I SGSYRL ++EPG+DID C+AP TR DFF++L+ + HP+VTN AIE A VPI+TFD++ +NIDL + LP ++ ++ NI DD +L GVD+ATEK LNGPRVT L+ +L PN SF+ V+R+VR WAKRRG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF V+ +W WP I L + +DA LGL+VW A N +HVMPI+TPAYP+MNSS VS HSL VM+ EF+RG + + +L G G WD L PS+FFA+ HYLA+DV E+E + W G+ ESR+RKL+D+ Y+ R + +P+ F + G G + VC+FV F+VDR +L G+ + + ++ F ++ W K M + +T +K LP +++GGR AR +R
Sbjct: 15 QAYKAIRTTPPEPKDLEQSDKLQTYMDKHFATESDENIQRRSLILADLRATFREWVKQVCLAKGVPEEIAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSTLKDIFLKHPKVTNLVAIEGAIVPILTFDYEEINIDLQIAILPRNTIPDNLNILDDNILAGVDTATEKSLNGPRVTELMIKLTPNRESFIGVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFVNQLYPTAAPSTLLLRFFMVLSTWKWPLAIQLCKTYDAKLGLEVWNANSGNNRYHVMPILTPAYPSMNSSFNVSTHSLSVMKDEFKRGLDLVQDILGKG--GDDWDALFEPSDFFAVQQHYLAVDVYTTKEDEEQAWCGFCESRIRKLVDSLAYIPQLCR-IRAFPKKFPLSYADDGAAAGATKKYGVCYFVAFDVDRRKLM-GKEVSIDNSVHYFTQNDL-YRWNKRTATMDVTVTPTVWKNLPESVFEDMGGRAVARNVR 506
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: D0MYH7_PHYIT (Poly(A) polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=D0MYH7_PHYIT) HSP 1 Score: 437 bits (1124), Expect = 6.770e-141 Identity = 236/506 (46.64%), Postives = 318/506 (62.85%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTY------MRIPARDLHL-YPRAFDRCCSGGVNGELPAHC----VCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEG--MCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP KD AKL Y+ + P S + R +L E+ IF+ WV++ C+ KGVPEE+A AGG I SGSYRL ++EPG+DID C+AP TR DFF+SL+++ HP+V+ AIE A VP++TFD++ +NIDL + LP S+ E+ NI DD VL GVD ATEK LNGPRVT L+ +L PN SF+ V+R+VR WAKRRG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF V+++W WP I L + HDA LGL+VW A N + VMPI+TPAYP+MNSS VS HSL VM+ EF+RG I + VL G G+ W L PSEFFA++ HYLA++V ++E + W + ESR+RKL+++ Y +R+ + L Y A + G NG+ PA CF+VGF++DR +L + R + + + + F+ + W K M + +T +K LP +E+GGR ARA R
Sbjct: 15 QAYKAIRTTPPEPKDLEQSAKLQTYMDEHFPTESDANITRRSLILAELRSIFRAWVKQVCMEKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKG--GSEWGPLFEPSEFFAVHQHYLAVEVYTEKQDEEQAWCSFCESRMRKLVESLAYNPALCRLRVYTKKFSLSYVTAGEAPVGGQSNGQPPAQPSKFGACFYVGFDIDRRQLRS-REVSIDSSVEYFKNNDL-YRWNKRTPTMDVRVTPVLWKALPESVFEEMGGRTVARAAR 516
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: G4YPR7_PHYSP (Poly(A) polymerase n=7 Tax=Phytophthora TaxID=4783 RepID=G4YPR7_PHYSP) HSP 1 Score: 435 bits (1119), Expect = 4.120e-140 Identity = 237/509 (46.56%), Postives = 317/509 (62.28%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPA--------------HCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEG--MCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP KD AKL ++ + P S + R +L E+ IF++WV++ C+ KGVPEE+A AGG I SGSYRL ++EPG+DID C+AP TR DFF+SL+++ HP+V+N AIE A VPI+TFD++ +NIDL + LP S+ E+ NI DD VL GVD ATEK LNGPRVT L+ +L PN SF+ V+R+VR WAKRRG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF V+++W WP I L + HDA LGL+VW A N + VMPI+TPAYP+MNSS VS HSL VM+ EF+RG I + VL G G+ W L PS+FFA++ HYLA++V +EE W G+ ESR+RKL+++ Y R L Y + F G GE PA VCF+VGF++DR +L + R + + ++ + F+ + W K M + +T +K LP +++GGR AR R
Sbjct: 15 QAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDVLSKG--GSEWGPLFEPSDFFAVHQHYLAVEVYTEKQEEEAAWCGFCESRMRKLVESLAYNPALCR-LRAYTKKFPLSFVTG--GEAPAGEQPNGAALAQPSKFGVCFYVGFDIDRRQLRS-REVSIDNSVEYFKNNDL-YRWNKRTPTMDVRVTPVVWKALPESVFEDMGGRAVARVAR 516
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A1V9ZUP3_9STRA (Poly(A) polymerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUP3_9STRA) HSP 1 Score: 429 bits (1104), Expect = 1.530e-138 Identity = 219/495 (44.24%), Postives = 310/495 (62.63%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLK--EGMCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP D KL Y+ + P+ ++ + R +L E+ IF+ WV++ CL +G+PEE+A AGGII SGSYRL ++EPG+DID C+AP TR DFFTSL+ +L H +VTN AIE A VPI+TFD++ +NIDL + L S+ ++ N+ DD + GVD+ATEK LNGPRVT L+ +L PN ASF+ V+R+VR WAK+RG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF ++ +W WP I L + HDA LGL+VW A N + VMPI+TPAYP+MNSS VS HSL VM+ EF+RG + + ++ G G+ W L P+ +F + HYLA+++ ++ W GY ESR+RKL+D+ Y L ++P+ F + E P H +FV F+VD+ +L + + + A F+ ++ W K EGM + +T +K LP + ++LGG+ A+ +R
Sbjct: 13 QAYKAIRTTPPEPVDLELSTKLQSYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLTRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKDILLKHVKVTNLVAIEGAVVPILTFDYEEINIDLQIAILERNSIPDNLNVLDDNIFVGVDTATEKSLNGPRVTELVIKLTPNRASFIAVLRIVRRWAKKRGLYSNKMGYLGGVNYCILVCFINQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTHDAKLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLNVMKEEFKRGLEVVKTIIKDG--GSDWSALFEPTPYFVDHQHYLAVEIFTSNPDDSAAWCGYAESRLRKLVDSLAYYNPQLCRLRVHPKKFPLTYVND-DPEDPKHGGTYFVAFDVDKLKLRNSKEIHLNGAVDDFKLTSL-YRWPKRVEGMDVKITPVVWKNLPEFVFEDLGGKKVAKEMR 503
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: W4GFD2_9STRA (Poly(A) polymerase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD2_9STRA) HSP 1 Score: 428 bits (1100), Expect = 4.610e-138 Identity = 223/491 (45.42%), Postives = 315/491 (64.15%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFE-ESATGVPWLKEGMCLALTAYSFKTLPAWTADELGGRDAAR 1491
Q + I PP D AKL ++A++ P +++ + R +L E+ +IF+ WV++ CL +GV EE+A AGG + SGSYRL ++EPG+DID +C+AP TR DFF+SL+++L HP+VTN AIE A VPI+TFD++ +NIDL + L + S+ ++ NI DD +L+GVDSATEK LNGPRVT L+ L PN +SF+ V+R+VR WAKRRG+Y NK+GYLGGVN+ ILV F QLYP A+PS LL FF V+ W WP+ I L + +DA LGL++W A N + VMPI+TPAYP+MNSS VS HSL VM+ EF RG A+ + ++ G GA W L PSE+F + HYLA+++ + W G+ ESR+RK +++ Y L +YP+ FD CS G+ C +FV F+VD+ +L G+ + + A F+ S P +GM + +TA +K+LP ++GG AA+
Sbjct: 17 QAYKPIRMTPPEPVDVELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGTVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKEILLKHPKVTNLVAIEGATVPILTFDYEDINIDLQIAILNLSSIPDNINILDDNILRGVDSATEKSLNGPRVTELMINLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEIWNANVGGNRFQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFARGYAMVKTIIAAG--GADWAPLFDPSEYFVDHQHYLAVEMYVADAADQGAWCGFAESRLRKFIESLAYHNPQLCRLRVYPKKFD-LCSEDAQGKFG--CT-YFVAFDVDKTKLR-GKEVRLDSAVDDFKLNSLYRWPKRVDGMDVRITALGWKSLPEAVFHDMGGLKAAK 500
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: F0W0R2_9STRA (Poly(A) polymerase n=4 Tax=Albugo TaxID=65356 RepID=F0W0R2_9STRA) HSP 1 Score: 428 bits (1101), Expect = 1.210e-137 Identity = 225/509 (44.20%), Postives = 313/509 (61.49%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSG--------------GVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLK--EGMCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP D KL +Y+ + P + + R +L E+ IF+ WV++ C+ KGVPEE+A AGG+I SGSYRL ++EPG+DID C+AP TR DFFTSL+K+ H +VTN NAIE A VP++TFD++ +NIDL + LP ++ ED NI +D +L GVD+ATEK LNGPRVT L+ +L PN SF+ V+R+VR WAKRRG+Y NKMGYLGGVN+ ILV F QLYP A+P+ LL FF V+ +W WP I L + D LGL+VW A N +HVMPI+TPAYP+MNSS VS HSL VM++EF R I + +L+ GA WD L S+FFA+ HYLA+DV E+ + W + ESR+RKL+++ Y+ + L +P+ F G E + CF+VGF++DR +L + R + + + F+ + W K + M + +T +K LP + +E+GGR A+++R
Sbjct: 15 QAYKAIRVTPPEPIDLEQSKKLKDYMDKHFPTENMVNITRRSLILAELRTIFRDWVKQVCIRKGVPEEIAADAGGLILVSGSYRLGVNEPGADIDTICVAPQQITREDFFTSLKKIFMQHSKVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSLNGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVGNNRYHVMPILTPAYPSMNSSFNVSTHSLAVMKQEFERALKIVQEILNRGA--VEWDPLFESSDFFAVQQHYLAVDVYTTNREDEQAWCSFCESRIRKLIESLAYIPMLCH-LRAFPKRFPLSFVGQDQDEKIETPTDRNNEEKETFKYGACFYVGFDIDRRQLRS-REVSIDSSVDYFKHNDL-YRWNKRSDSMDVRITPVLWKNLPDYVFEEMGGRIVAKSIR 518
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A5D6Y2P8_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2P8_9STRA) HSP 1 Score: 429 bits (1104), Expect = 3.250e-137 Identity = 237/533 (44.47%), Postives = 317/533 (59.47%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYM--------------------RIPARDLHLYPRAFDRCCSGGVNGELPA-----HCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLKEG--MCLALTAYSFKTLPAWTADELGGRDAARALRAALRAKDDATRKA 1539
Q + I PP KD AKL ++ A+ P S + R +L E+ IF+ WV++ C+ KGVPEE+A AGG I SGSYRL ++EPG+DID C+AP +R DFF+SL+++ HP+V+N AIE A VPI+TFD++ +NIDL + LP +V + NI DDAVL GVD+ATEK LNGPRVT L+ +L PN SF+ V+R+VR WAKRRG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF V+ +W WP I L + HDA LGL+VW A N + VMPI+TPAYP+MNSS VS H+L VM+ E +R I + +L+ G GA W +L PS+FFA++ HYLA+DV +E + W G+ ESR+RKL+++ Y+ PAR PA VC+FVGF++DR +L GR + + ++ F+ + W K M + +T +K LP D++GGR AAR R K A KA
Sbjct: 15 QAYKAIRTTPPEPKDLEQSAKLQAFMEASFPTESDANITRRSLILAELRSIFRAWVKQVCMQKGVPEEIAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVSRDDFFSSLKQIFLRHPKVSNLVAIEGAVVPIITFDYEEINIDLQIAILPRNAVPDTINILDDAVLLGVDTATEKSLNGPRVTELMIKLTPNRESFISVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLANWKWPLAIQLCKTHDAKLGLEVWNANSGNNRYQVMPILTPAYPSMNSSFNVSTHTLAVMKDELKRALGIVQDILNKG--GADWSQLFEPSDFFAVHQHYLAVDVYTATADEEQAWCGFCESRIRKLVESLAYIPQLCRIRTFTKKFPLSFVEAHAPARPSSAQXXXXXXXXXXXXXXXAPAPQPTRFGVCYFVGFDIDRRQLR-GREVSIDNSVDYFKHNDL-YRWNKRTPTMDVKITPVVWKNLPECVFDDMGGRAAARIARREFMKKKKADEKA 543
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Match: A0A067BQE6_SAPPC (Poly(A) polymerase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQE6_SAPPC) HSP 1 Score: 426 bits (1094), Expect = 3.740e-137 Identity = 218/495 (44.04%), Postives = 310/495 (62.63%), Query Frame = 1
Query: 28 QCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQA--AQNPWHVMPIITPAYPAMNSSLAVSAHSLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFFAMYSHYLAIDVMAGGEEEFRGWRGYMESRVRKLLDNFTYMRIPARDLHLYPRAFDRCCSGGVNGELPAHCVCFFVGFNVDRARLAAGRRLDVGHAFQKFEESATGVPWLK--EGMCLALTAYSFKTLPAWTADELGGRDAARALR 1500
Q + I PP D KL Y+ + P+ ++ + R +L E+ IF+ WV++ CL +G+PEE+A AGGII SGSYRL ++EPG+DID C+AP TR DFF+SL+ +L H +VTN AIE A VPI+TFD++ +NIDL + L S+ E+ N+ DD +L GVD+ TEK LNGPRVT L+ +L PN +SF+ V+R+VR WAK+RG+Y NKMGYLGGVN+ ILV F QLYP A+PS LL FF ++ +W WP I L + HDA LGL+VW A N + VMPI+TPAYP+MNSS VS HSL VM+ EF+RG + + ++ G G W L PS +F + HYLAI++ E+ W GY ESR+RKL+D+ Y L ++P+ F C + + E H +F+ F+VD+ +L + + + A F+ ++ W K +GM + +T +K LP + +++GG+ A+ +R
Sbjct: 14 QAYKAIRTTPPEAVDVEMSEKLQAYMDEHFPMEVEKNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTRDDFFSSLKDILLKHAKVTNLVAIEGAIVPILTFDYEEINIDLQIAILERNSIPENLNVLDDNILVGVDTPTEKSLNGPRVTELVIKLTPNRSSFIAVLRIVRRWAKKRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTHDAHLGLEVWNANVGGNKYQVMPILTPAYPSMNSSYNVSVHSLSVMKEEFKRGLEVVKTIIKDG--GRDWSALFEPSPYFVDHQHYLAIEIYTSNVEDQAAWCGYAESRLRKLVDSLAYYNPQLCRLRVHPKKFPLCFASDPDDE--KHGGAYFLAFDVDKLKLRNSKEIHLNGAVDDFKMNSL-YRWPKRVDGMDVKITPVVWKNLPEFVFEDIGGKKIAKEMR 503 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352228 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13160 ID=mRNA_13160|Name=jgi.p|Trimin1|352228|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2079bp|location=Sequence derived from alignment at Contig_113:17830..21747+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCCTCTACCACTCCCAAGCCGGTGCAGTGCTTCCCTGTCATCAACAAback to top protein sequence of jgi.p|Trimin1|352228 >Trimin1|352228|estExt_Genemark1.C_Ctg_1130004 ID=Trimin1|352228|estExt_Genemark1.C_Ctg_1130004|Name=jgi.p|Trimin1|352228|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=659bp MASTTPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRback to top mRNA from alignment at Contig_113:17830..21747+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13160 ID=mRNA_13160|Name=jgi.p|Trimin1|352228|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3918bp|location=Sequence derived from alignment at Contig_113:17830..21747+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_113:17830..21747+ >mRNA_13160 ID=mRNA_13160|Name=jgi.p|Trimin1|352228|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1977bp|location=Sequence derived from alignment at Contig_113:17830..21747+ (Tribonema minus UTEX_B_3156 )back to top |