mRNA_13090 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|172802
Unique Name	mRNA_13090
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A835YQ33_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ33_9STRA)

HSP 1 Score: 850 bits (2197), Expect = 8.080e-312
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1

Query:    1 MHLPAVTVPPPAPSNARALLQLLEEASTVSGIQQASNGSSAHTEVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            MHLPAVTVPPPAPSNARALLQLLEEASTVSGIQQASNGSSAHTEVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII
Sbjct:    1 MHLPAVTVPPPAPSNARALLQLLEEASTVSGIQQASNGSSAHTEVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 422

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: D8LBD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD8_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 6.270e-129
Identity = 222/398 (55.78%), Postives = 271/398 (68.09%), Query Frame = 1

Query:   76 ASTVSGIQQASNGSSAHT-EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            A+T SG       SS H  EVWTCGQNSYGEL  G  DTG R+ H LV    GR VVDVAAGNEHTV+LCS G+V TAGYNDNGQCG G  QR+  LT +      + G +  QVH+YNGCEH+  VL DG++ SFGYN RGQLG G TSSE VP+ V G  L G +V   +CSYYHS++ C +G VY FGRNDFGQLG GDV DR  P  V+    +    ++++ACGQYHT+++T    V  CGKNDYGQLGL+       + +    V G L   +   VRCGYYH++VLT    VFGFGRNDYGQLGLGH  Q +  P+ I G   K V +++AGCYHTV +   GML+V GRN+HGQLGTGD  ERHSP+P+  FLGK++AK+AAGFYHT+++
Sbjct:  213 AATPSGGSCLRACSSFHEREVWTCGQNSYGEL--GHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVP----IDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRG--LNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQR---ITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLES----TESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A6H5JS79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS79_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 6.280e-122
Identity = 223/447 (49.89%), Postives = 273/447 (61.07%), Query Frame = 1

Query:   76 ASTVSGIQQASNGSSAHT-EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIA--------------------------SLSEA-------------NMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAK----------IAAGFYHTVII 1266
            A+T SG       SS H  EVWTCGQNSYGEL  G  DTG R+ H LV    GR VVDVAAGNEHTV+LCS G+V TAGYNDNGQCG G  QR+  LT +                            L++A               G R   VH+YNGCEH+  VL DG++ SFGYN RGQLG G TSSE VP+ V G  L G +V   +CSYYHS++ C +G VY FGRNDFGQLG GDV DR  P  V+    +    ++++ACGQYHT ++T    V  CGKNDYGQLGL+       + +    V G L   +   VRCGYYH++VLT    VFGFGRNDYGQLGLGH  Q +  P+ I G  GK + +++AGCYHTV +   GML+V GRN+HGQLGTGD  ERHSP+P+  F+GK++AK          +AAGFYHT+++
Sbjct:  213 AATPSGGSCLRACSSFHEREVWTCGQNSYGEL--GHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQIRVSRILASQAPFYTHDKLNDAPRAALHINHYYGRRTGGRLAAVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRG--LNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVVDRKLPCLVESLRGQR---ITTLACGQYHTAVSTLEIGVQSCGKNDYGQLGLES----TESQRKFVTVKGKLDGAQVWHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQGKHIYRISAGCYHTVLIGADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFVGKRIAKDTPARSISTKVAAGFYHTIVL 648

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A3R7DJI2_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7DJI2_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 1.280e-120
Identity = 208/391 (53.20%), Postives = 264/391 (67.52%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTC-----TDGAV---YAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+G+V V AGNEHT+ + ++G V T GYNDNGQCGHG   R+  +T +    +A+     +Q+H+YNGCEH+  V  DG +ASFGYN RGQLG GTT+SE++P+ + G  L   +V  V+CSYYH++++C     + G+V   Y+FGRND+GQLGL D  DR  PT V    A ++  + ++ACGQYH+ + T +  VL CGKNDYGQLGLDG          +    G L NE  V VRCGYYH++VL   G VFGFGRNDYGQLG+G    H  Q IA P+ +  L+GK VV++A GCYHTV VA SGMLYV GRNNHGQLGTGD  ER  P  +D F+GK+VA +AAGFYHTV++
Sbjct:  500 EVWSCGQNSYGELSHG--DTAPRKSFDRVEALQGKGIVHVCAGNEHTIAVSADGSVYTCGYNDNGQCGHGVTTRLPAMTELTKWPDASFERNVSQIHAYNGCEHTVVVAHDGSVASFGYNYRGQLGHGTTTSESLPKRIRG--LDARRVTLVSCSYYHTMLSCAATMSSGGSVADVYSFGRNDYGQLGLNDTLDRRVPTLVD---ALSNIPLLALACGQYHSAVATADNKVLACGKNDYGQLGLDGLEN---QLVPVAIGSGRLDNETVVDVRCGYYHTIVLCRRGRVFGFGRNDYGQLGIGDAGVHVNQRIATPTLLTDLEGKEVVRIACGCYHTVAVAESGMLYVFGRNNHGQLGTGDTTERLIPCAVDTFVGKRVAVVAAGFYHTVVL 880

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: W4G7N6_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7N6_9STRA)

HSP 1 Score: 392 bits (1008), Expect = 2.970e-119
Identity = 210/391 (53.71%), Postives = 265/391 (67.77%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTC-----TDGAV---YAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+G+V V AGNEHT+ + ++G V T GYNDNGQCGHG   R+  +T +    +A+     +Q+H+YNGCEH+  V  DG +ASFGYN RGQLG GTT+SE++P+ + G  L   +V  V+CSYYH++++C     + G+V   Y+FGRND+GQLGL D  DR  PT V    A ++  + ++ACGQYH+ + T +  VLVCGKNDYGQLGLDG          +    G L NE  V VRCGYYH++VL   G VFGFGRNDYGQLG+G    H  Q IA P+ +  L+GK VV++A GCYHTV VA SGMLYV GRNNHGQLGTGD  ER  P  +D F+GK+VA +AAGFYHTVI+
Sbjct:  500 EVWSCGQNSYGELSHG--DTAPRKSFDRVEALQGKGIVHVCAGNEHTIAVSADGSVYTCGYNDNGQCGHGVTTRLPAMTELTKWPDASFERNVSQIHAYNGCEHTVVVAHDGSVASFGYNYRGQLGHGTTTSESLPKRIRG--LDARRVTLVSCSYYHTMLSCAATMSSGGSVADVYSFGRNDYGQLGLNDTLDRRVPTLVD---ALSNIPLLALACGQYHSAVATADNKVLVCGKNDYGQLGLDGLEN---QLVPVAIGSGRLDNETVVDVRCGYYHTIVLCRRGRVFGFGRNDYGQLGIGDAGVHVNQRIATPTLLTDLEGKEVVRIACGCYHTVAVAESGMLYVFGRNNHGQLGTGDTTERLIPCAVDTFVGKRVAVVAAGFYHTVIL 880

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A397BD94_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BD94_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 3.910e-119
Identity = 208/391 (53.20%), Postives = 264/391 (67.52%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTC-----TDGAV---YAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+G+V V AGNEHT+ + ++G V T GYNDNGQCGHG   R+  +T +    +A+     +Q+H+YNGCEH+  V  DG +ASFGYN RGQLG GTT+SE++P+ + G  L   +V  V+CSYYH++++C     + G+V   Y+FGRND+GQLGL D  DR  PT V    A ++  + ++ACGQYH+ + T +  VL CGKNDYGQLGLDG          +    G L NE  V VRCGYYH++VL   G VFGFGRNDYGQLG+G    H  Q IA P+ +  L+GK VV++A GCYHTV VA SGMLYV GRNNHGQLGTGD  ER  P  +D F+GK+VA +AAGFYHTV++
Sbjct:  500 EVWSCGQNSYGELSHG--DTAPRKSFDRVEALQGKGIVHVCAGNEHTIAVSADGSVYTCGYNDNGQCGHGVTTRLPAMTELTKWPDASFERNVSQIHAYNGCEHTVVVAHDGSVASFGYNYRGQLGHGTTTSESLPKRIRG--LDARRVTLVSCSYYHTMLSCAATMSSGGSVADVYSFGRNDYGQLGLNDTLDRRVPTLVD---ALSNIPLLALACGQYHSAVATADNKVLACGKNDYGQLGLDGLEN---QLVPVAIGSGRLDNETVVDVRCGYYHTIVLCRRGRVFGFGRNDYGQLGIGDAGVHVNQRIATPTLLTDLEGKEVVRIACGCYHTVAVAESGMLYVFGRNNHGQLGTGDTTERLIPCAVDTFVGKRVAVVAAGFYHTVVL 880

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A418F4T5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F4T5_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 1.340e-118
Identity = 208/391 (53.20%), Postives = 264/391 (67.52%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTC-----TDGAV---YAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+G+V V AGNEHT+ + ++G V T GYNDNGQCGHG   R+  +T +    +A+     +Q+H+YNGCEH+  V  DG +ASFGYN RGQLG GTT+SE++P+ + G  L   +V  V+CSYYH++++C     + G+V   Y+FGRND+GQLGL D  DR  PT V    A ++  + ++ACGQYH+ + T +  VL CGKNDYGQLGLDG          +    G L NE  V VRCGYYH++VL   G VFGFGRNDYGQLG+G    H  Q IA P+ +  L+GK VV++A GCYHTV VA SGMLYV GRNNHGQLGTGD  ER  P  +D F+GK+VA +AAGFYHTV++
Sbjct:  500 EVWSCGQNSYGELSHG--DTAPRKSFDRVEALQGKGIVHVCAGNEHTIAVSADGSVYTCGYNDNGQCGHGVTTRLPAMTELTKWPDASFERNVSQIHAYNGCEHTVVVAHDGSVASFGYNYRGQLGHGTTTSESLPKRIRG--LDARRVTLVSCSYYHTMLSCAATMSSGGSVADVYSFGRNDYGQLGLNDTLDRRVPTLVD---ALSNIPLLALACGQYHSAVATADNKVLACGKNDYGQLGLDGLEN---QLVPVAIGSGRLDNETVVDVRCGYYHTIVLCRRGRVFGFGRNDYGQLGIGDAGVHVNQRIATPTLLTDLEGKEVVRIACGCYHTVAVAESGMLYVFGRNNHGQLGTGDTTERLIPCAVDTFVGKRVAVVAAGFYHTVVL 880

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A485K4I2_9STRA (Aste57867_1 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4I2_9STRA)

HSP 1 Score: 389 bits (999), Expect = 4.720e-118
Identity = 208/387 (53.75%), Postives = 266/387 (68.73%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIV--TCTDGA--VYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+ +V V AGNEHTV L ++G V T GYNDNGQCGHG   RIA++T +  L   +     +Q+H+YNGCEH+  V +DG +ASFGYN RGQLG G+T+SE++P+ + G  L  H+VK V+CSYYH+I+  T T G   VY+FGRNDFGQLGL D  DR  PT V    A  +  ++S+ACGQYH++++T  GAVL  GKNDYGQLG +           +  V     ++ ++ VRCGYYH++VL  GG VFGFGRNDYGQLG+G    H  Q IA P  I  LDGK +V+++ GCYH++ VA SG+LYV GRNNHGQLGTGD  ER +P  +D F+GK+VA +AAGFYHTV++
Sbjct:  419 EVWSCGQNSYGELSHG--DTNSRKSFDRVEALQGKTIVQVCAGNEHTVALAADGSVFTCGYNDNGQCGHGVTTRIASMTEVTKLDFEHA---VSQIHAYNGCEHTVVVASDGSVASFGYNYRGQLGHGSTTSESIPKRIRG--LDMHKVKFVSCSYYHTILSTTTTGGTSEVYSFGRNDFGQLGLNDALDRRLPTLVD---ALTNVQLTSLACGQYHSVVSTATGAVLSFGKNDYGQLGFES------LDNQMVPVAVPGLDDTSLEVRCGYYHTIVLCTGGRVFGFGRNDYGQLGVGDVGLHTNQRIATPQLIDELDGKEIVRISCGCYHSIAVAESGLLYVFGRNNHGQLGTGDTTERLTPCAVDTFVGKRVAMVAAGFYHTVVL 789

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: A0A1V9YWG2_9STRA (HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWG2_9STRA)

HSP 1 Score: 389 bits (999), Expect = 4.730e-118
Identity = 209/383 (54.57%), Postives = 262/383 (68.41%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG----HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    V  L G+GVV V AGNEHTV L ++G V T GYNDNGQCG G   R+A +T +  L +A       QVH+YNGCEH+  V ADG  A+FGYN RGQLG+GTT+SE+V R + G  L G +V+ V+CSYYH++++    AVYAFGRND+GQLG  D  DR +P  V    A  +  ++S+ACGQYH+ + T +G +L  GKNDYGQLG++G     +   A+ + G  L       VRCGYYH++ L  GG V+GFGRNDYGQLGLG    +A Q IA P  I  L+GK +V++A GCYHTV VA +GMLYV GRNNHGQLGTGDA ER  P  +D F+GK+VA +AAGFYHTV++
Sbjct:  363 EVWSCGQNSYGELSHG--DTNPRKLFERVEALQGKGVVQVCAGNEHTVALAADGGVFTCGYNDNGQCGQGTTTRVAAMTEVTKL-DAEFDHAVAQVHAYNGCEHTVLVAADGAAAAFGYNYRGQLGLGTTTSESVARPLRG--LDGRRVRLVSCSYYHTVLSVEGDAVYAFGRNDYGQLGHNDTLDRRSPAIVD---ALTNVPLASLACGQYHSTVATTSGVILAFGKNDYGQLGVEGLEN--QLVPAVVKSG--LERFVCTEVRCGYYHTIALCTGGHVYGFGRNDYGQLGLGDAGANAQQRIAMPQLIADLEGKEIVRIACGCYHTVAVAENGMLYVFGRNNHGQLGTGDATERLVPTAVDAFVGKRVAMVAAGFYHTVVL 733

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BLAST of jgi.p|Trimin1|172802 vs. uniprot
Match: T0QQR3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QQR3_SAPDV)

HSP 1 Score: 389 bits (999), Expect = 4.740e-118
Identity = 202/382 (52.88%), Postives = 265/382 (69.37%), Query Frame = 1

Query:  130 EVWTCGQNSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVLTAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFAVLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYYHSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSIACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALANERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLG---HAMQSIAAPSCIRGLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYPLDIFLGKQVAKIAAGFYHTVII 1266
            EVW+CGQNSYGEL  G  DT  R+    +  L G+G+V V AGNEHTV L  +G V T GYNDNGQCG G   R+A++TPI+ L +A      +Q+H+YNGCEH+  V  DG  A+FGYN RGQLG+G+T+SE+VP+++ G  +   +VK V+CSYYH++++    AVYAFGRND+GQLG  D  DR +P  V    A A+  +SS+ACGQYH+ + T +G +L  GKNDYGQLG+DG     +    + + G  L       VRCGYYH++ L  GG V+GFGRNDYGQLG+G   +A Q IA P+ +  L+GK +V++A GCYHT+ VA +GMLY  GRNNHGQLGTGD  ER  P P+D F+GK++A +AAGFYHTV++
Sbjct:  412 EVWSCGQNSYGELSHG--DTNPRRAFERIETLQGKGIVQVCAGNEHTVALSGDGTVFTCGYNDNGQCGQGTTTRVASMTPISKL-DAGFEHGVSQIHAYNGCEHTVIVNGDGAAAAFGYNYRGQLGLGSTTSESVPKVLRGLDMT-KRVKLVSCSYYHTLLSVDGDAVYAFGRNDYGQLGHNDTMDRRSPAPVD---ALANVPLSSVACGQYHSTVVTTSGVILAFGKNDYGQLGVDGIEN--QLVPMVVKSG--LERFVCTEVRCGYYHTIALCVGGHVYGFGRNDYGQLGIGEAANAQQRIAVPTLVPELEGKDIVRIACGCYHTLAVADNGMLYAFGRNNHGQLGTGDTNERVVPTPIDAFVGKRIAMVAAGFYHTVVL 782

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|172802 vs. uniprot

BLAST of jgi.p|Trimin1|172802 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YQ33_9STRA	8.080e-312	100.00	Regulator of chromosome condensation 1/beta-lactam...	[more]
D8LBD8_ECTSI	6.270e-129	55.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JS79_9PHAE	6.280e-122	49.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A3R7DJI2_9STRA	1.280e-120	53.20	Uncharacterized protein (Fragment) n=3 Tax=Aphanom...	[more]
W4G7N6_9STRA	2.970e-119	53.71	Uncharacterized protein n=10 Tax=Aphanomyces astac...	[more]
A0A397BD94_9STRA	3.910e-119	53.20	Uncharacterized protein (Fragment) n=1 Tax=Aphanom...	[more]
A0A418F4T5_9STRA	1.340e-118	53.20	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A485K4I2_9STRA	4.720e-118	53.75	Aste57867_1 protein n=1 Tax=Aphanomyces stellatus ...	[more]
A0A1V9YWG2_9STRA	4.730e-118	54.57	HECT E3 ubiquitin ligase n=1 Tax=Achlya hypogyna T...	[more]
T0QQR3_SAPDV	4.740e-118	52.88	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_96	contig	Contig_96:530057..532555 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|172802\|e_gw1.96.51.1
Description	guanyl-nucleotide exchange factor activity
COG category	DZ
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5184@1\|root,KOG1426@2759\|Eukaryota
Evalue	1.03e-129
Seed ortholog	2880.D8LBD8
Hectar predicted targeting category	other localisation
TranscriptId	173124
Track	FilteredModels1
ProteinId	172802

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172802	gene_13090	Tribonema minus UTEX_B_3156	gene	Contig_96 530057..532555 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|172802	Trimin1\|172802\|e_gw1.96.51.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_96 530057..532555 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13090_3	exon_13090_3	Tribonema minus UTEX_B_3156	exon	Contig_96 530057..530190 -
exon_13090_2	exon_13090_2	Tribonema minus UTEX_B_3156	exon	Contig_96 530485..531308 -
exon_13090_1	exon_13090_1	Tribonema minus UTEX_B_3156	exon	Contig_96 532248..532555 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13090	CDS_13090	Tribonema minus UTEX_B_3156	CDS	Contig_96 532248..532555 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_96:530057..532555-
coding sequence from alignment at Contig_96:530057..532555-

spliced messenger RNA

>mRNA_13090 ID=mRNA_13090|Name=jgi.p|Trimin1|172802|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1266bp|location=Sequence derived from alignment at Contig_96:530057..532555- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCACTTGCCAGCAGTCACGGTGCCACCACCAGCGCCATCGAATGCACG
AGCATTGCTGCAGCTGCTGGAGGAGGCATCCACAGTGAGCGGCATACAGC
AGGCTTCCAATGGCAGCAGCGCACACACGGAAGTATGGACATGCGGACAG
AACAGCTATGGCGAACTGTGCTTGGGTGGCCGGGACACAGGCGGACGGCA
GCGACACTCGCTGGTGTGCAAGCTTTCTGGACGGGGCGTGGTGGATGTTG
CTGCGGGCAATGAGCACACCGTTGTGCTGTGCAGCAATGGAGATGTGCTG
ACTGCAGGTTACAACGACAATGGCCAGTGCGGTCATGGCGATAAGCAGAG
GATAGCGAACCTCACACCTATTGCCTCCTTGTCGGAGGCAAACATGGGAG
CCCGCTGCACACAAGTCCACTCTTACAACGGCTGTGAACACAGCTTTGCT
GTGCTGGCTGACGGTCGCCTAGCAAGCTTTGGGTACAACTGCAGAGGACA
GCTGGGGGTCGGCACAACAAGCAGTGAGACAGTGCCGCGACTTGTGAGCG
GTGGCGGGCTCGCAGGACATCAGGTCAAGGATGTTGCCTGCAGTTATTAC
CACAGCATTGTGACCTGCACCGATGGCGCAGTGTATGCCTTCGGCCGCAA
TGACTTTGGTCAGCTTGGCCTCGGCGATGTCTCAGACAGGGTGACCCCAA
CACGCGTGCAGCTACCAGTGGCGGAGGCACACACTGGCGTCAGCAGCATT
GCGTGCGGCCAGTATCACACGCTGCTGACAACTTGCAATGGTGCAGTGCT
TGTCTGTGGAAAGAACGACTATGGTCAGCTGGGGCTGGACGGTGGCACAA
CAGGCGCACGCGCTTGCAAGGCGCTGACCAGGGTGGGTGGAGCACTAGCA
AACGAGAGAGCTGTGGCGGTCAGGTGCGGCTATTACCACTCGCTGGTGTT
GACAGAGGGAGGGGAAGTGTTCGGCTTTGGCCGCAATGACTATGGGCAGC
TGGGGCTGGGGCACGCCATGCAGAGCATTGCAGCTCCATCATGTATCCGT
GGCCTGGACGGGAAAGGAGTGGTGCAGCTGGCTGCGGGGTGCTACCACAC
AGTGTTTGTGGCAGGCAGTGGCATGCTGTATGTTTGCGGCAGGAATAATC
ATGGACAGCTGGGCACTGGAGATGCAGCCGAGCGCCACAGCCCGTATCCA
CTCGACATATTCCTTGGCAAGCAAGTGGCCAAAATTGCTGCTGGCTTCTA
CCACACCGTGATCATC

protein sequence of jgi.p|Trimin1|172802

>Trimin1|172802|e_gw1.96.51.1 ID=Trimin1|172802|e_gw1.96.51.1|Name=jgi.p|Trimin1|172802|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=422bp
MHLPAVTVPPPAPSNARALLQLLEEASTVSGIQQASNGSSAHTEVWTCGQ
NSYGELCLGGRDTGGRQRHSLVCKLSGRGVVDVAAGNEHTVVLCSNGDVL
TAGYNDNGQCGHGDKQRIANLTPIASLSEANMGARCTQVHSYNGCEHSFA
VLADGRLASFGYNCRGQLGVGTTSSETVPRLVSGGGLAGHQVKDVACSYY
HSIVTCTDGAVYAFGRNDFGQLGLGDVSDRVTPTRVQLPVAEAHTGVSSI
ACGQYHTLLTTCNGAVLVCGKNDYGQLGLDGGTTGARACKALTRVGGALA
NERAVAVRCGYYHSLVLTEGGEVFGFGRNDYGQLGLGHAMQSIAAPSCIR
GLDGKGVVQLAAGCYHTVFVAGSGMLYVCGRNNHGQLGTGDAAERHSPYP
LDIFLGKQVAKIAAGFYHTVII

mRNA from alignment at Contig_96:530057..532555-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13090 ID=mRNA_13090|Name=jgi.p|Trimin1|172802|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2499bp|location=Sequence derived from alignment at Contig_96:530057..532555- (Tribonema minus UTEX_B_3156 )
ATGCACTTGCCAGCAGTCACGGTGCCACCACCAGCGCCATCGAATGCACG
AGCATTGCTGCAGCTGCTGGAGGAGGCATCCACAGTGAGCGGCATACAGC
AGGCTTCCAATGGCAGCAGCGCACACACGGAAGTATGGACATGCGGACAG
AACAGCTATGGCGAACTGTGCTTGGGTGGCCGGGACACAGGCGGACGGCA
GCGACACTCGCTGGTGTGCAAGCTTTCTGGACGGGGCGTGGTGGATGTTG
CTGCGGGCAATGAGCACACCGTTGTGCTGTGCAGCAATGGAGATGTGCTG
ACTGCAGGGTGAGTAAAATATGAGGCATCAGTTATATGTGGTTGGTCTGA
GCAGGCTTGAGACTTTGTGCTACAAGCTGCAGCATAGTCAGGATGCATGG
GTTCTGCTTCAAGTACTCTGAGCCTTACTATCATGAATTGAAAGCATGTA
CAGCAATTAGATGCGTTGCAACAATGTCAATCTCTGACACTGCCAAAGTC
GGTGGCAGCTGGTGCACCAGCTCTCTAAGCAGTAAGAACTTCCGTGACGT
CAGGCCATGCCTATACTGAGGGCACAATGATGTGTGGGTTGCGATTGACT
TGCAATGGACCGCATCGTCAGTACAGCAATTGGCCTAATCACTTTAGCAA
TAGCCACCGTAGACCCAGTGATGATGTCATTTCGAGTTCTGCGTTTTAAG
TCCACCGGCAAGAATTCAAGAAAAATTCTTCTGTTTGATAAGCCAGTGGA
TTTCGTATGCCATCTGATGCAGGGCAAGCTATGATGAGCCGCAAAGCAAA
CCACACTTAAGTCAGCAGATAGATCACAGGAGCAACATAAGCTAGCAAAT
GGACTGCATATGTCCTTTCAAGAAACATGCAGTTATGCATCACACCAATG
CTATGGTGGAAAACTGGCAGTGAATTGAGCAGTTACCAAGGCTATGATTT
GTTTTGCATTGCTTTGCATTGGTCATTCCAGACAACAGCAACACAAACAG
CATCTAGTGATCTGATGCTGTACGTCCTGAAATGTTGGGCACGTTGCAAT
GAGCGAGGCTCACTGACCCCAGAGATTGCACGTGCATGCTACTTGCTTCA
ATTAGACTGTGTTGCACCACAAGGAGCGATGCATGCCAAATTGTGTCCAA
CCGACAGTGCTATTGAGTTTGAGCAAGCACACATCGTTGTCACATGCACA
AGGTATCGTTGGTCCTCAATCACCATCATCCCCTGTTCTGCGTGCAGTTA
CAACGACAATGGCCAGTGCGGTCATGGCGATAAGCAGAGGATAGCGAACC
TCACACCTATTGCCTCCTTGTCGGAGGCAAACATGGGAGCCCGCTGCACA
CAAGTCCACTCTTACAACGGCTGTGAACACAGCTTTGCTGTGCTGGCTGA
CGGTCGCCTAGCAAGCTTTGGGTACAACTGCAGAGGACAGCTGGGGGTCG
GCACAACAAGCAGTGAGACAGTGCCGCGACTTGTGAGCGGTGGCGGGCTC
GCAGGACATCAGGTCAAGGATGTTGCCTGCAGTTATTACCACAGCATTGT
GACCTGCACCGATGGCGCAGTGTATGCCTTCGGCCGCAATGACTTTGGTC
AGCTTGGCCTCGGCGATGTCTCAGACAGGGTGACCCCAACACGCGTGCAG
CTACCAGTGGCGGAGGCACACACTGGCGTCAGCAGCATTGCGTGCGGCCA
GTATCACACGCTGCTGACAACTTGCAATGGTGCAGTGCTTGTCTGTGGAA
AGAACGACTATGGTCAGCTGGGGCTGGACGGTGGCACAACAGGCGCACGC
GCTTGCAAGGCGCTGACCAGGGTGGGTGGAGCACTAGCAAACGAGAGAGC
TGTGGCGGTCAGGTGCGGCTATTACCACTCGCTGGTGTTGACAGAGGGAG
GGGAAGTGTTCGGCTTTGGCCGCAATGACTATGGGCAGCTGGGGCTGGGG
CACGCCATGCAGAGCATTGCAGCTCCATCATGTATCCGTGGCCTGGACGG
GAAAGGAGTGGTGCAGCTGGCTGCGGGGTGCTACCACACAGTGTTTGTGG
CAGGCAGTGGCATGCTGTATGGTGAGTGAAATTTCTGCAAGCGATGACTG
TATTGCAAGACTTAGTCACACTTTTTCTAAACATACTAGTGGCATCATTG
CTACCAGACTTTGTGCCTGAATAGCACGACCCAGTGCCCTGTGCAGCCAT
CAGGACTATGCTGTACTTTTCATTCCATCCACCTTTAAGAGGCATTGCCA
TATGTAAAGCACTTCCAAGTGCTTCGAAGCATACACAACCATGTGCCACT
AAGTCTGTGTTGCATACGACTCAAGCCACTCACAGCATGTCGTCAATGCT
GCTGTCCTGCTGCAGTTTGCGGCAGGAATAATCATGGACAGCTGGGCACT
GGAGATGCAGCCGAGCGCCACAGCCCGTATCCACTCGACATATTCCTTGG
CAAGCAAGTGGCCAAAATTGCTGCTGGCTTCTACCACACCGTGATCATC

Coding sequence (CDS) from alignment at Contig_96:530057..532555-

>mRNA_13090 ID=mRNA_13090|Name=jgi.p|Trimin1|172802|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1266bp|location=Sequence derived from alignment at Contig_96:530057..532555- (Tribonema minus UTEX_B_3156 )
ATGCACTTGCCAGCAGTCACGGTGCCACCACCAGCGCCATCGAATGCACG
AGCATTGCTGCAGCTGCTGGAGGAGGCATCCACAGTGAGCGGCATACAGC
AGGCTTCCAATGGCAGCAGCGCACACACGGAAGTATGGACATGCGGACAG
AACAGCTATGGCGAACTGTGCTTGGGTGGCCGGGACACAGGCGGACGGCA
GCGACACTCGCTGGTGTGCAAGCTTTCTGGACGGGGCGTGGTGGATGTTG
CTGCGGGCAATGAGCACACCGTTGTGCTGTGCAGCAATGGAGATGTGCTG
ACTGCAGGTTACAACGACAATGGCCAGTGCGGTCATGGCGATAAGCAGAG
GATAGCGAACCTCACACCTATTGCCTCCTTGTCGGAGGCAAACATGGGAG
CCCGCTGCACACAAGTCCACTCTTACAACGGCTGTGAACACAGCTTTGCT
GTGCTGGCTGACGGTCGCCTAGCAAGCTTTGGGTACAACTGCAGAGGACA
GCTGGGGGTCGGCACAACAAGCAGTGAGACAGTGCCGCGACTTGTGAGCG
GTGGCGGGCTCGCAGGACATCAGGTCAAGGATGTTGCCTGCAGTTATTAC
CACAGCATTGTGACCTGCACCGATGGCGCAGTGTATGCCTTCGGCCGCAA
TGACTTTGGTCAGCTTGGCCTCGGCGATGTCTCAGACAGGGTGACCCCAA
CACGCGTGCAGCTACCAGTGGCGGAGGCACACACTGGCGTCAGCAGCATT
GCGTGCGGCCAGTATCACACGCTGCTGACAACTTGCAATGGTGCAGTGCT
TGTCTGTGGAAAGAACGACTATGGTCAGCTGGGGCTGGACGGTGGCACAA
CAGGCGCACGCGCTTGCAAGGCGCTGACCAGGGTGGGTGGAGCACTAGCA
AACGAGAGAGCTGTGGCGGTCAGGTGCGGCTATTACCACTCGCTGGTGTT
GACAGAGGGAGGGGAAGTGTTCGGCTTTGGCCGCAATGACTATGGGCAGC
TGGGGCTGGGGCACGCCATGCAGAGCATTGCAGCTCCATCATGTATCCGT
GGCCTGGACGGGAAAGGAGTGGTGCAGCTGGCTGCGGGGTGCTACCACAC
AGTGTTTGTGGCAGGCAGTGGCATGCTGTATGTTTGCGGCAGGAATAATC
ATGGACAGCTGGGCACTGGAGATGCAGCCGAGCGCCACAGCCCGTATCCA
CTCGACATATTCCTTGGCAAGCAAGTGGCCAAAATTGCTGCTGGCTTCTA
CCACACCGTGATCATC