mRNA_13076 (mRNA) Tribonema minus UTEX_B_3156
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A835YK64_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK64_9STRA) HSP 1 Score: 1125 bits (2909), Expect = 0.000e+0 Identity = 560/560 (100.00%), Postives = 560/560 (100.00%), Query Frame = 2 Query: 281 MSKGRVSFMGGASALAIGVAITFALFKQYPLRAQLMDWSGKTIPEPHREWSNRLLSLLPSPPVGESLQTPDGKKRVMVFMNGEHTEGVDVLLDPENDAVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMKYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHDLRINSFTGHKWNARVGDTVIKSWALSERRQEQTILLSRDNLDAPLPKSTRKAKVDENDPLEVNRRWHAERLKQMQA 1960
MSKGRVSFMGGASALAIGVAITFALFKQYPLRAQLMDWSGKTIPEPHREWSNRLLSLLPSPPVGESLQTPDGKKRVMVFMNGEHTEGVDVLLDPENDAVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMKYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHDLRINSFTGHKWNARVGDTVIKSWALSERRQEQTILLSRDNLDAPLPKSTRKAKVDENDPLEVNRRWHAERLKQMQA
Sbjct: 1 MSKGRVSFMGGASALAIGVAITFALFKQYPLRAQLMDWSGKTIPEPHREWSNRLLSLLPSPPVGESLQTPDGKKRVMVFMNGEHTEGVDVLLDPENDAVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMKYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHDLRINSFTGHKWNARVGDTVIKSWALSERRQEQTILLSRDNLDAPLPKSTRKAKVDENDPLEVNRRWHAERLKQMQA 560
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: D8LFE8_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE8_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 1.740e-132 Identity = 222/466 (47.64%), Postives = 311/466 (66.74%), Query Frame = 2 Query: 503 RVMVFMNGEHTEGVDVLLDPEN-DAVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMK-YVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGD------IPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELD-DHGRTVERKG---LEGGLFKILLTAKNIDVPGAALYYEN-QFW--KEWEPGHDLRINSFTGHKWNARVGDTVIKSWALSERRQEQTILLSRDNL 1855
+V VF NGEH G + P + + ++ L L PK+ C V + R+ + CKV+N + RV +A V DGE+LY+VP +R FVWPTVK+GR+V VPHVK GA + +ETLS SPR++ L+NF++ EE++ II++AL M+ + ++LKRSSTGTK K+I++TRTS+NAF+T + TA LK+RIF LLG++ Y +TWADGLQVLRYN S+ Y+ H+DYL+ + G H F S LGTNRFATVVLY NDV GGETVFT +PD ++ V E +E L + + WEE+L CR + V PK+G A+LFYNQ PDG++D +S HGACPV+ GQKWAANLWVWNGPRYG + +D + GRTV++ G + F++ N DV GA+L+++ Q W ++W G +IN+F H+W +V +K+W +SER ++Q+ +LS+ +L
Sbjct: 99 KVKVFHNGEHEGGKSFTVSPADVEGLQDLGEWLGPKMEC--VSQGMRRDEPKYCKVFNRVGVRVPSMASVEDGETLYVVPQNRNFVWPTVKIGRKVTVPHVKSPLGAEVVLETLSHSPRVFSLYNFMDMEEADSIIEDALGMTQEAYRLKRSSTGTKGKAISKTRTSDNAFVTHTNTAQALKRRIFQLLGIEEYHETWADGLQVLRYNESQAYVAHFDYLESAEG--HDFKSEGLGTNRFATVVLYFNDVREGGETVFTHAPGIDHHLVPD-TKVPVREVLENL------------DLPRSGWEEKLLLQCRRHMVVAPKRGQAVLFYNQHPDGRKDLSSEHGACPVIDGQKWAANLWVWNGPRYGLSSVDPETGRTVDKAGNNIVPDPTFQVQAAFLNEDVEGASLWFDGKQLWMDRDWRIGETFKINTFLTHRWVVKVNGAEVKTWLVSERTKDQSFVLSKASL 547
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: W7TKQ8_9STRA (Prolyl 4-hydroxylase, alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKQ8_9STRA) HSP 1 Score: 335 bits (860), Expect = 7.480e-103 Identity = 200/454 (44.05%), Postives = 273/454 (60.13%), Query Frame = 2 Query: 506 VMVFMNGEHTEGVDVLLDPEND-AVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKR-GAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMK-YVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLG-TNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGH-DLRINSFTGHKWNAR--VGD---TVIKSWALSERRQEQTIL 1837
V++ NGE T + L+P+ ++E L K V+ D C+V++ + + + D + L+ VPP R FVWP ++G RV VP V G + +ETLS SPR++ML NF++ E+++++I+ L ++ F LKRS+TGT+ ++ RTSENAF T S A+ LK+R+F LLGM+ YV+TWADGLQVLRYN SK YI H DYL+ S DH+FDS G TNRFATV+LYL DVE GGETVF LG+ ++ + Q +E A AA ++ GSWEE +T C +RLAVKP++G A+LFY+Q PDG+ D S HGACPV+ G KWAANLWVWNGPR+G H T K EG + + +A V G ALY+E W + PG +L+ ++ GHKWN R GD V+ SW + + E I+
Sbjct: 141 VLIHDNGESTPAGSLYLEPKTTTSIEEL------KSAVGLVI---DACHGGTCRVFDRYGYEIKALGALHDEQLLFAVPPSRHFVWPAFEIGHRVAVPGVTSSLPGHPIILETLSDSPRVFMLENFLSAEDADEVIETTLGITAAGFALKRSTTGTQGAVVSSQRTSENAFDTTSPVAMKLKRRVFDLLGMRPYVETWADGLQVLRYNASKAYIPHMDYLEFDSNADHNFDSASPGGTNRFATVLLYLTDVEEGGETVFPLGE-----PLEKEMRTTQEVQAEARARGRAADLKPGSWEEEMTETCISRLAVKPRKGRAVLFYSQHPDGRPDERSLHGACPVVKGVKWAANLWVWNGPRFG------HSATSLAKEAEGKIQAVFSSA----VEGVALYWETTRWGKMGPGEAELKAMTYQGHKWNVRRDEGDEHGAVLASWTIEAEKAEDGII 570
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A4D9CQP1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQP1_9STRA) HSP 1 Score: 318 bits (814), Expect = 6.780e-98 Identity = 190/453 (41.94%), Postives = 266/453 (58.72%), Query Frame = 2 Query: 506 VMVFMNGEHTEGVDVLLDPEND-AVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKR-GAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMKYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLG-TNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGH-DLRINSFTGHKWNARVGD-----TVIKSWALSERRQEQTIL 1837
V++ NGE T + L+P+ ++E L K V+ D C+V++ + + + D + L+ VPP+R FVWP ++G RV VP V G + +ETLS SPR++++ NF++ E+++++I+ L ++ F LKRS+TGT+ ++ RTSENAF T S A+ LK+R+F LLGM++ DGLQVLRYN SK YI H DYL+ S DH+FDS G TNRFATV+LYL DVE GGETVF LG+ ++ + Q +E A AA + GSWEE +T C +RLAVKP++G A+LFY+Q PDG D S HGACPV+ G KWAANLWVWNGPR+G H T K EG + + +A V G ALY+E W + PG +L+ ++ GHKWN R + V+ SW + + E ++
Sbjct: 3 VLIHDNGESTPAGSLYLEPKTTTSIEEL------KSAVGLVI---DACHGGTCRVFDRYGYEIKALGALHDEQLLFAVPPNRHFVWPAFEIGHRVAVPGVTSSLPGHPIFLETLSDSPRVFLVENFLSAEDADEVIETTLGITAAGFALKRSTTGTQGAVVSSHRTSENAFDTTSPVAMKLKRRVFDLLGMRW-----DGLQVLRYNASKAYIPHMDYLEFDSNADHNFDSASPGGTNRFATVLLYLTDVEEGGETVFPLGE-----PLEKETRTTQEIQAEARARGRAADLTPGSWEEEMTETCISRLAVKPQKGRAVLFYSQNPDGTPDERSLHGACPVVKGVKWAANLWVWNGPRFG------HSATSPAKEAEGKIQAVFSSA----VEGVALYWETTRWGKMGPGEAELKAMTYQGHKWNVRRDEGEEQGAVLASWTIEAEKAEDGVI 426
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A7S2V4E4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4E4_9STRA) HSP 1 Score: 312 bits (799), Expect = 2.120e-95 Identity = 178/438 (40.64%), Postives = 258/438 (58.90%), Query Frame = 2 Query: 470 GESLQTPDGKKRVMVFMNGEHTEGVDVLLDPENDA-VEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAE--VTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAA-MEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGMK-YVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEP-------GHDLRINS 1747
G +++ G ++V VF NG H EG+ +L E+ A VE + +LL P P+ + CK+YN + QR A+ V + ++LVP R F+WP+++VG V + H+ G + VETLS SPR++ LHNF EE++ ++ L+ D+ +LKRSS G ++ RTSEN F S A+ LK+R F LLG + Y ++W DGLQVLRYN+S Y H D Q H++DS G+NR+AT++LY+ DVE GGETVF DG + + +A++ +R + + E+ SW+ER+ A C+ RLAVKPK+G AILFY+Q PDG D S HG CPVL+G KWAAN+W+WNGPR GYT+L + G ++ + F + N+DVPGA L + + W++ + G DLR+N+
Sbjct: 30 GVCVESDSGSRKVNVFPNGNHEEGLHFVLKEEDCARVEDVSSLLAPLF--------PELCQPKGCKLYNAIGQRWRSCADLPVLEEAMVFLVPEHRPFMWPSIEVGHAVTIDHIDDLIGQQNLTVETLSTSPRVFRLHNFFTAEEADMLVNHMLKNKDESERLKRSSVGATGYTVNSERTSENGFDNFSPVAMALKRRSFELLGFEEYKESWVDGLQVLRYNLSTAYNPHMDPFPVGEDQYHNYDSAGKGSNRYATILLYMTDVEEGGETVFPKAPAADGSMMPLAQAVDDVRERKLVEMF-----ERRSWQERMVAECQHRLAVKPKKGDAILFYSQNPDGTVDENSLHGGCPVLSGTKWAANIWIWNGPRVGYTKLLEDGSLIDTLVPDEQPFVAVF--HNMDVPGAELLWHDN-WRDTDSFIGKIDIGKDLRVNT 451
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A7S2SRF8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF8_9STRA) HSP 1 Score: 305 bits (782), Expect = 6.470e-92 Identity = 199/509 (39.10%), Postives = 284/509 (55.80%), Query Frame = 2 Query: 440 LLSLLPSPPVGESLQTPDGKKRVMV-FMNGEHTEGVDVLLDPENDAVEILDTLLTPKLGCKRVVEMPDRNPDEPCKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKG--KRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEK-SIAQTRTSENAFITASETAIGLKKRIFALLGM-KYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLGTNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEE---AAVLAAAGV----EKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGL-------------------------EGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHDLRINSFTGHKWNARVGDTVIKSWALSERRQEQTILLSRDNL 1855
LL L PS + DG+ R +V F NG +G VL+ + A L +LG + C +Y+ A R+T+ ++ +S+++VPP+R FV+PT ++GR V + ++ K G A+ +ETLS SPR++ L+NF+ +EES++++ AL +D L+RS+TG + + S + RTSENAF +S A LK+R +LGM Y + DGLQVLRYNVS YI H+DYLD++ G H +DS G+NRFATV+ YL+DVE GGET+F G D E + ++ E A L A G E G WE R+ C+TRLAVKPK+ +A+LFY+Q PDG D+AS HGACPV+ G KWAANLW+WN R GY R +KG E + + + N DV GA+L+YE+ FW ++ PG + +N+F GH WN RV + + W ++E +Q +LS+ NL
Sbjct: 42 LLGLSPSLSLHTFPPHVDGRTRTLVLFENGRLEDGTSVLVP--STACRDLSGWAAGQLGMSNCSQ---------CTLYDQSAGRITQCDQLQPNQSVWVVPPERWFVFPTGELGRTVELRRMRSPRKEGHAITLETLSQSPRVFRLNNFLTDEESDELVANALADTDPVTSLQRSTTGAEHQVSFNKVRTSENAFDGSSRLARILKERAVDVLGMLPYDEEITDGLQVLRYNVSTAYISHHDYLDDNGG-GHDYDSSKDGSNRFATVLFYLSDVEEGGETLFPQGQAVDEGEPNAFGSVTVRDVPPEDHIKAELIANGTMDLFEPGRWERRMLIQCKTRLAVKPKKATAVLFYSQHPDGTLDKASLHGACPVIRGTKWAANLWIWNKVRLGYQ------RAPRKKGAGRFDSSXXXXXXXXXXXXXGDEAPKEPPVGQPKASFFNKDVIGASLFYEDTFWDDFPPGKSIGVNTFKGHGWNVRVQEKNVLRWVITEEL-DQKYILSQANL 531
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A1E7FRG0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRG0_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.460e-84 Identity = 163/385 (42.34%), Postives = 239/385 (62.08%), Query Frame = 2 Query: 725 LYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGM-KYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQ-DHSFDSGHLGTNRFATVVLYLNDV--EAGGETVFTLGDIP-----DGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERK--GLEGGL------FKILLTAKNID----VPGAALYYENQFWKEWEPGHD-LRINSFTGHKWNARVGDTVIKSWALSE 1813
LY VP R+F++ VG +PHV G A+ +E LSLSPR++ + NF + +ES +I+++A D ++KRS+TG S+ RTSE+ F T+ +TAI +KKR F LG +Y+++ +DGLQ+LRYNVSK Y H D+++++SGQ H ++S G NR+AT++LY++D+ + GGETVF G +P + + +EA EQLR S+ +VL + GSWEE L LCRTRLA++P A+LFY+Q P+G+ D++S HGACPVL+ QK+AANLWVWN PR G+ G +++K GG KI +N A L+Y++QFW +PG L +N+F GH WN +V V+K+W ++E
Sbjct: 228 LYAVPAGRVFMFAPSYVGEIFHLPHVPGALDKAIYLEVLSLSPRVFDVFNFFSRDESKEIVEKAQAEKSDSHRIKRSTTGASSHSVNSRRTSESGFDTSGKTAIKIKKRCFEALGYDEYIESHSDGLQILRYNVSKAYNSHLDFIEDNSGQLKHDYESSGTGGNRYATILLYMSDLGDDDGGETVFPQGMMPKIALEEEEAVSSNEAREQLRVSDRGSVLKS-----GSWEENLVVLCRTRLAIRPHSSRAVLFYSQHPNGEVDKSSLHGACPVLSNQKYAANLWVWNTPRSGFA-----GSPIKKKFQNENGGAVTAPTNMKISAEFENSGQDPTFAEAKLFYQDQFWGSLKPGDPVLGVNTFEGHVWNVKVNKKVVKTWVITE 602
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A448Z5W0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5W0_9STRA) HSP 1 Score: 288 bits (736), Expect = 6.770e-84 Identity = 166/400 (41.50%), Postives = 246/400 (61.50%), Query Frame = 2 Query: 692 TKVAEVTDGES-LYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGM-KYVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQ-DHSFDSGHLGTNRFATVVLYLNDV--EAGGETVFTLG---DIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYT------ELDDHGRTVERKGLE-GGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHD-LRINSFTGHKWNARVGDTVIKSWALSER---RQEQTI 1834
T+ T E+ LY VP R+F++ VG +PHV G A+ +E LSL PR++ + NF + ES +++ A+ + ++KRS+TG S+ RTSE+ F T +TA+ +K+R F+ LG +Y D ++DGLQ+LRYNVSK Y H DY+++ +G+ H +DS G NRFAT++LY++D+ GGETVF G IP+ I +EA+EQLR S++ +VL E GSWEE L A+CR++L+V+P A+LFY+Q P+G D+ S HGACPVL QK+AANLWVWN PR G+ + ++G +V K L+ G+F T +D A L+Y +QFW + G L++N++ GH WN +V ++K+W +SE +QE T+
Sbjct: 256 TQTCTATPREAHLYAVPAGRVFMFAPSHVGEIFHLPHVTGASSKAIYLEVLSLKPRVFDVFNFFSRAESKELVDRAIAETSASHRIKRSTTGAGAASLNSKRTSESGFDTHGKTALTIKRRCFSALGFDEYEDGFSDGLQILRYNVSKAYNSHLDYIEDRTGELKHDYDSAGTGGNRFATILLYMSDLGENDGGETVFPHGIRSHIPEEERITKEEALEQLRASDQGSVL-----EPGSWEESLVAVCRSKLSVRPHSSRAVLFYSQHPNGSVDKNSLHGACPVLNDQKYAANLWVWNTPRDGFAGSPIKKKFRNNGASVAAKNLKITGVFSNSGTDPRMDR--AELFYRDQFWGKLGKGDPVLKVNTYQGHVWNVKVDGNIVKTWEISEENGEKQEMTV 648
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A7S1FZA1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZA1_9STRA) HSP 1 Score: 288 bits (738), Expect = 2.270e-83 Identity = 156/372 (41.94%), Postives = 237/372 (63.71%), Query Frame = 2 Query: 725 LYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQTRTSENAFITASETAIGLKKRIFALLGM-KYVDTWADGLQVLRYNVSKGYIDHYDYLDE-SSGQDHSFDSGHLGTNRFATVVLYLNDVE--AGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGV----EKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYG-YTELDDHGRTVERKGLEGGLFKILLTA-KNIDVPGAALYYENQFWKEWEPGHDLR-INSFTGHKWNARVGDTVIKSWAL 1807
LY VP R F++ VG + H++ A M + LSLSPR++ +H F N+EE++ I++ AL + + +LKRSSTG ++ TRTS+NAF T S TA+ +K+R F +LG+ +Y D +DGLQVLRYN+S Y+DH D++D+ Q + +S +GTNRFAT++LY+ D+ GGETVFT G P G +D +++ S+ A++ G+ +K SW+E++ A C +RL +P + ++LFY+Q P+G+ D++S+HG CPVL G+KWAANLWVWNGPRYG + D G+ E +GL+ + + KN A L+YEN +W + EPG +N+F GH+WN +VG+ ++K+W +
Sbjct: 356 LYAVPVGRHFMFAAAYVGEVFHLDHIEQVLRAPMSLTALSLSPRIFEVHEFFNQEEADDIVQRALTETSETHRLKRSSTGRSGYNVNPTRTSDNAFDTHSHTAMTIKERCFKMLGIFEYEDEVSDGLQVLRYNISTAYVDHMDWIDDYQRSQKANMESWAIGTNRFATILLYMTDLPEAGGGETVFTEG-WPIGQSVD-----DRISLSQSLAMVKEKGLTKLFQKDSWQEKMVAKCNSRLTFRPGRAKSVLFYSQHPNGEPDKSSQHGGCPVLEGEKWAANLWVWNGPRYGPHAPTFDTGQD-ENEGLDHAVTATFRNSGKNPAFKSAKLFYENTYWGDLEPGGSGHGVNTFHGHRWNVKVGEDIVKTWVI 720
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Match: A0A4D9D991_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D991_9STRA) HSP 1 Score: 285 bits (729), Expect = 5.150e-83 Identity = 165/401 (41.15%), Postives = 239/401 (59.60%), Query Frame = 2 Query: 659 CKVYNGMAQRVTKVAEVTDGESLYLVPPDRLFVWPTVKVGRRVVVPHVKGKRGAAMEVETLSLSPRLYMLHNFVNEEESNQIIKEALEMSDDDFKLKRSSTGTKEKSIAQT-RTSENAFITASETAIGLKKRIFALLGMK-YVDTWADGLQVLRYNVSKGYIDHYDYLDESSGQDHSFDSGHLG-TNRFATVVLYLNDVEAGGETVFTLGDIPDGPEIDVDEAIEQLRNSEEAAVLAAAGVEKGSWEERLTALCRTRLAVKPKQGSAILFYNQVPDGKRDRASRHGACPVLAGQKWAANLWVWNGPRYGYTELDDHGRTVERKGLEGGLFKILLTAKNIDVPGAALYYENQFWKEWEPGHDLRINSFTGHKWNARVGDT------VIKSWALSERRQEQTI 1834
C+V+ V+ E+ D + L+LVP R F+WPT K G +V V HV G + VETLS SP+++ L+NF +E++++I L + D L RS+TG + + RTSENA+ S ++ LK+RIF LLG++ Y + WADGLQ+LRYN++K Y H+DYL+ G DS G +NRFATVV+YL DV AGGETVF G DG + E ++++ + + L A G++ GSW+ERL CR++LAV+P + A+LFYNQ+P+G +D AS HG CPVL G KWAANLWVWNG +G D+H VE +G L L+ G +LY+E+ F+ +PG +N+F GH ++ G T ++ ++ + +R + I
Sbjct: 204 CRVFLHNGWEVSNCDELVDDDKLWLVPRHREFIWPTFKRGHQVEVRHVASGNGEPIIVETLSESPKVFRLNNFFTSQEADELIAHTLNLKDPVNGLHRSTTGQGASAQEDSHRTSENAWDLRSPASLRLKRRIFDLLGIRPYKNAWADGLQILRYNLTKAYNSHFDYLEHPKGS--RMDSARPGGSNRFATVVVYLTDVAAGGETVFPAGKALDGTDKSYGEVLQEMESQD--IDLRAIGIKPGSWQERLVVECRSKLAVRPVKAQAVLFYNQLPEGGQDNASLHGGCPVLEGVKWAANLWVWNGNVHG----DEHISQVEED--DGSLTVNFLSTNQ----GYSLYWEDTFFAALQPGVPKSMNTFDGHTFHIFEGTTEKEKGKLVATYVMKKRANRKDI 590 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|101011 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13076 ID=mRNA_13076|Name=jgi.p|Trimin1|101011|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2146bp|location=Sequence derived from alignment at Contig_96:419140..429306+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGGCTACCCCATTGCTTCAGAGAAACTGCGACGGAGTAAGGAGTGTGAGAback to top protein sequence of jgi.p|Trimin1|101011 >Trimin1|101011|CE101010_227 ID=Trimin1|101011|CE101010_227|Name=jgi.p|Trimin1|101011|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=561bp MSKGRVSFMGGASALAIGVAITFALFKQYPLRAQLMDWSGKTIPEPHREWback to top mRNA from alignment at Contig_96:419140..429306+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13076 ID=mRNA_13076|Name=jgi.p|Trimin1|101011|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10167bp|location=Sequence derived from alignment at Contig_96:419140..429306+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_96:419140..429306+ >mRNA_13076 ID=mRNA_13076|Name=jgi.p|Trimin1|101011|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1683bp|location=Sequence derived from alignment at Contig_96:419140..429306+ (Tribonema minus UTEX_B_3156 )back to top |