mRNA_13026 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|6646
Unique NamemRNA_13026
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA)

HSP 1 Score: 902 bits (2331), Expect = 0.000e+0
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1
Query:  157 MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF 1497
            MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF
Sbjct:    1 MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF 447          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI)

HSP 1 Score: 759 bits (1959), Expect = 1.350e-273
Identity = 368/433 (84.99%), Postives = 406/433 (93.76%), Query Frame = 1
Query:  181 PADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWG 1479
            P  D GDRQVE+WK+KKLIKSLQKARGNGTSMISLVIPPGDQI+RVGKMLADEYGTA+NIKSRVN+LSVL AITSTQQRLKLY++VPPNGLVIYCGTI+TDEGKEKR+N+DFEPFK INTSLYLCDNKFHTEALDELLQDD+RFGFIVMDGNG LYGTLQGS R+V+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNC GLV+AGSA+FK+EL  SDLFDPRLLK+V+K VDVSYGGE+GFNQAIELS E LG+VKLVQEKRLLQKYFDEI+QDTGKYCFMVDDTLKGLDLGAVETLIVW+NLDINR  +RNN+T EEKVLHLTPEQE N++HF D ETG ELE  DK +LVEWIANNYKNFGA LEF+TNRSQEGSQFC+GFGGIGG+LRW+VDFA++DE+ +E+ +D WG
Sbjct:    7 PEVDQGDRQVEIWKVKKLIKSLQKARGNGTSMISLVIPPGDQIARVGKMLADEYGTATNIKSRVNKLSVLSAITSTQQRLKLYSRVPPNGLVIYCGTIVTDEGKEKRMNLDFEPFKAINTSLYLCDNKFHTEALDELLQDDERFGFIVMDGNGTLYGTLQGSTRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCAGLVLAGSAEFKNELQGSDLFDPRLLKNVIKMVDVSYGGEAGFNQAIELSAETLGSVKLVQEKRLLQKYFDEINQDTGKYCFMVDDTLKGLDLGAVETLIVWDNLDINRLEVRNNSTGEEKVLHLTPEQENNDTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNRSQEGSQFCKGFGGIGGILRWRVDFAEMDESNYEDVED-WG 438          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA)

HSP 1 Score: 708 bits (1828), Expect = 1.300e-253
Identity = 347/419 (82.82%), Postives = 381/419 (90.93%), Query Frame = 1
Query:  190 DAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDE 1446
            D+ D QVE+WK+KKLIKSLQ ARGNGTSMISL+IPP DQ+SRVGKML+DEYGTASNIKSRVNRLSVL AITSTQQRLKLYN+VPPNGLVIYCGT++TDEGKEK V  DFEPFKPINTSLYLCDNKFHTEAL+ELL+DD+RFGFIVMDGNGCLYGTLQG+ REV+HKFTVDLPKKHGRGGQSALRFARLR+EKRHNYVRKVAE A QFFI+DNK NC G+V+AGSADFKSEL TSD+FD RL + V+KTVDVSYGGE+GFNQAIELS E L NVKLVQEKRLLQ YFDEISQDTGKYCFMV+DTLK LDLGAVETLI++E L+ NR  LRNN+TQEEKVL LTP+QE+N SHF D ETG ELETI+K+ LVEW ANNYK FG TLEFVTNRSQEGSQF RGFGGIGG LRW+VDFA++ E
Sbjct:    2 DSTDHQVEVWKVKKLIKSLQAARGNGTSMISLIIPPRDQVSRVGKMLSDEYGTASNIKSRVNRLSVLSAITSTQQRLKLYNRVPPNGLVIYCGTVVTDEGKEKSVIYDFEPFKPINTSLYLCDNKFHTEALNELLEDDERFGFIVMDGNGCLYGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQFFISDNKPNCSGIVLAGSADFKSELQTSDMFDNRLARVVLKTVDVSYGGENGFNQAIELSAETLANVKLVQEKRLLQNYFDEISQDTGKYCFMVEDTLKALDLGAVETLIIYEALETNRLVLRNNSTQEEKVLFLTPDQEQNASHFHDPETGVELETIEKMPLVEWFANNYKKFGTTLEFVTNRSQEGSQFVRGFGGIGGCLRWRVDFAEMAE 420          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: F0YK48_AURAN (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK48_AURAN)

HSP 1 Score: 692 bits (1785), Expect = 3.500e-247
Identity = 337/420 (80.24%), Postives = 382/420 (90.95%), Query Frame = 1
Query:  190 DAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEA 1449
            DA D+QVE+WK+KKL+KSL  ARGNGTSMISLVIPP DQISRV KMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLY++VP NGLV+YCGTIMTDEGKE+RVNIDFEPFKPINTSLYLCDNKFHTEALDELL+DDD+FGFI+MDGNG LYGTLQG++REV+HKF+VDLPKKHGRGGQSALRFARLR+EKRHNYVRKVAE A Q FI+ +K N  GLV+AGSADFKSEL TSD+FD RL + V+KTVDVSYGGE GFNQAIELS E LG+VKLVQEKRLLQKYFDEISQDTGKYCFMV+DTLK L+LGAVETL+VWENLDI+R TLRN+   E+KVLHL+ EQ+ +E +F D  +G ELE  +K++LVE++ANNYK+FG TLEFVTNRSQEGSQFCRGFGGIGG+LRW+VDF +++ A
Sbjct:   11 DAQDKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYSRVPLNGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDDKFGFIIMDGNGSLYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAELAVQMFISADKPNVAGLVLAGSADFKSELHTSDMFDQRLARVVIKTVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKYFDEISQDTGKYCFMVEDTLKALELGAVETLVVWENLDIDRLTLRNHAAGEDKVLHLSKEQQAHEEYFHDAASGVELEVTEKVSLVEFLANNYKSFGTTLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFLEMEMA 430          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A812U0R4_SYMMI (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U0R4_SYMMI)

HSP 1 Score: 686 bits (1770), Expect = 1.260e-244
Identity = 329/426 (77.23%), Postives = 382/426 (89.67%), Query Frame = 1
Query:  175 AAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAM 1452
            ++  D+  D+QVEMWK+KKLIKSLQ ARGNGTSMISL+IPP DQ+SR+  MLA+EYGTASNIKSRVNRLSVLGAITSTQQ+LKLYNKVPPNGLVIYCGTI+TD+GKEKRVNIDFEPF+ INTSLYLCDNKFHTEAL+ELL+DDD+FGFIVMDGNGCLYGTLQG+ REV+HKFTV+LPKKHGRGGQSALRFARLRLEKRHNYVRK AE A Q F+++NK N  GLV+AGS DFK+EL+ SD FDPRL K V+K VDVSYG + GFNQAIELS E+L NVKLVQEK+LLQKYFDEI+QDTGKYCFMV DTL+ L++ +VET+IVWENL INR T++N +TQ+E VLHLTPEQE+N+SHF D  TG ELE ++KI+LVEW+AN Y+ +GA LEFVT+RSQEGSQFC+GFGGIGGLLRW+VDF +L+ A+
Sbjct:    2 SSKTDEDQDKQVEMWKVKKLIKSLQAARGNGTSMISLIIPPRDQVSRISTMLANEYGTASNIKSRVNRLSVLGAITSTQQKLKLYNKVPPNGLVIYCGTILTDDGKEKRVNIDFEPFRAINTSLYLCDNKFHTEALNELLEDDDKFGFIVMDGNGCLYGTLQGNTREVLHKFTVELPKKHGRGGQSALRFARLRLEKRHNYVRKCAEMAVQLFLSENKPNVTGLVLAGSXDFKTELLQSDHFDPRLQKVVIKMVDVSYGMDPGFNQAIELSAESLANVKLVQEKKLLQKYFDEINQDTGKYCFMVADTLQALEMSSVETIIVWENLTINRITVKNTSTQQETVLHLTPEQEQNDSHFHDPVTGVELEVVEKISLVEWLANEYRKYGANLEFVTDRSQEGSQFCKGFGGIGGLLRWRVDFTELETAV 427          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: W7TWS4_9STRA (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWS4_9STRA)

HSP 1 Score: 686 bits (1769), Expect = 1.990e-244
Identity = 341/457 (74.62%), Postives = 386/457 (84.46%), Query Frame = 1
Query:  172 SAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERN-----ESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF*GFTQGRYSD 1527
            SA      G+R V+ WK+KKLIKSLQ+A+GNGTSMISL+IPP DQISRV KMLADEYGTA+NIKSR NRLSVL AITSTQQRLKLY+KVPPNGLV+YCGTIMTDEGKE+R+ IDFEPFKPINTSLYLCDNKFHTEAL ELL+DDD+FGFI+MDGNG LYGTLQG+ R V+HKF+VDLPKKHGRGGQSA+RFARLR+E RHNYVRKVAE A  +FITDNK N VGLVMAGSADFK+EL  SDLFDPRLLK V+KTVDVSYGGE+GFNQAIEL+ E LG+VKLVQEK+LLQKYFDEISQDTGKYCFMVDDTLKGL+LGAVETLIVWE L+  RY +R+NTT EE+VLH+  EQ  N      +H RD +TG ELE +DKI+LVEW A+NY  FG  LEFVTNRSQEG+QFC+GFGG+GGLLRW+VDFA+  E  + +     G D D   G T+  Y D
Sbjct:    3 SAGQQSADGNRAVDTWKVKKLIKSLQQAKGNGTSMISLIIPPRDQISRVNKMLADEYGTATNIKSRTNRLSVLDAITSTQQRLKLYSKVPPNGLVMYCGTIMTDEGKERRITIDFEPFKPINTSLYLCDNKFHTEALGELLEDDDKFGFIIMDGNGSLYGTLQGNTRTVLHKFSVDLPKKHGRGGQSAVRFARLRMEARHNYVRKVAELAVHYFITDNKANVVGLVMAGSADFKTELQLSDLFDPRLLKVVLKTVDVSYGGENGFNQAIELAAETLGSVKLVQEKKLLQKYFDEISQDTGKYCFMVDDTLKGLELGAVETLIVWEGLETMRYVVRDNTTGEERVLHVGKEQYANGASGDNTHLRDAKTGRELEVVDKISLVEWFADNYTKFGTQLEFVTNRSQEGNQFCKGFGGVGGLLRWKVDFAEHSEETYAD----MGEDSDEEGGATEEDYED 455          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7R9U8Q0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Q0_9STRA)

HSP 1 Score: 684 bits (1766), Expect = 2.530e-244
Identity = 336/431 (77.96%), Postives = 384/431 (89.10%), Query Frame = 1
Query:  187 DDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWG 1479
            D+   +QVE+WK+KKLIKSL  ARGNGTSMISLV+PPGDQISRV KML +EYGTASNIKSRVNRLSVLGAITSTQQRLKLYN+VPPNGLVIYCGTI+T+EGKEKRVNIDFEPFKPINTSLYLCDNKFHTE L +LL DD+RFGFIVMDGNGCLYGTLQG+ R+V+HKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRK AE A QFFITDNK N  GLV+AGSADFK++L  SDLFD RL + V+KTVDVSYGGESGFNQAIEL+ E LGNVKLVQEK++LQKYFDEI+QDTGKYCFMV+DTL  LDLGAVETLIV+ENLD +R T+RN++T EEKVLHL   Q++++SHF D  TG ELE ID++ L+EW+ANNY+NFG +LEFVT+RSQEGSQF +GFGGIGG+LRW V FA+L   + ++ DD++G
Sbjct:    6 DEEQQKQVELWKMKKLIKSLTAARGNGTSMISLVLPPGDQISRVAKMLQEEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNRVPPNGLVIYCGTIITEEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEPLHDLLADDERFGFIVMDGNGCLYGTLQGNVRDVMHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKCAEHAVQFFITDNKPNVRGLVLAGSADFKNDLYNSDLFDQRLARVVIKTVDVSYGGESGFNQAIELAAETLGNVKLVQEKKILQKYFDEINQDTGKYCFMVNDTLNALDLGAVETLIVYENLDCDRITVRNSSTGEEKVLHLDANQQQDDSHFFDNATGVELEIIDRMPLLEWLANNYRNFGTSLEFVTDRSQEGSQFVQGFGGIGGILRWSVQFAEL--GLDDDFDDDFG 434          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S3MEB0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB0_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 1.780e-243
Identity = 334/440 (75.91%), Postives = 378/440 (85.91%), Query Frame = 1
Query:  199 DRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMH-------EEDDDEWGNDMDGF 1497
            DRQVEMWK+KKLIKSLQ ARGNGTSMISL+ PP DQ+SR+ KMLADEYGTASNIKSRVNRLSVLGAITSTQQ+LKLY ++P NGLVIYCGTI+TD+GKEKRVNIDFEPFKPINTSLYLCDNKFHTEAL+ELL+DDD FGFIVMDGNG LY +LQG+ R ++HKFTVDLPKKHGRGGQSALRFARLRLEKRHNYV KVAE A  +FITDNKCN  GL++AGSADFK  L+ SD FDPRL K V++TVDVSYG E GFNQAIEL+ E L NVKLVQEKRLLQ+Y DEISQDTGKYCFMV DTL+ L++ +VETLIVWENL +NR  +RN +T EE VLHLTP+QERN+SHF D  TG +LE ID+  LVEW+ANNYK+FGA LEF+T+RSQEGSQFCRGFGGIGGLLRW+VDF +++ A         ++DDDE   D D F
Sbjct:   10 DRQVEMWKVKKLIKSLQAARGNGTSMISLITPPKDQVSRINKMLADEYGTASNIKSRVNRLSVLGAITSTQQKLKLYTRIPDNGLVIYCGTILTDDGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDTFGFIVMDGNGTLYASLQGNTRSILHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVTKVAELAANYFITDNKCNVTGLILAGSADFKEVLLNSDRFDPRLAKAVLRTVDVSYGMEPGFNQAIELATECLSNVKLVQEKRLLQRYMDEISQDTGKYCFMVQDTLQALEMSSVETLIVWENLAVNRLVVRNVSTSEESVLHLTPDQERNDSHFHDPVTGVQLEIIDRQTLVEWLANNYKSFGAKLEFITDRSQEGSQFCRGFGGIGGLLRWKVDFVEMEMAAELDHAGAADDDDDEDYFDGDAF 449          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A7S3NJC5_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJC5_9STRA)

HSP 1 Score: 682 bits (1761), Expect = 2.730e-243
Identity = 335/432 (77.55%), Postives = 386/432 (89.35%), Query Frame = 1
Query:  184 ADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNT-TQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLD---EAMHEEDD 1467
            A DA   QVE+WK+KKL+KSL  ARGNGTSMISLVIPP DQISR+ KMLADEYGTASNIKSRVNRLSVL AITSTQQRLKLY+KVP NGLV+YCGTI+TDEGKEK+VNIDFEPFKPINTSLYLCDNKFHTEAL+ELL+DDD+FGFI+MDGNG LYGTLQG++REV+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAE A QFFIT++K N  GL++AGSADFKSEL  S++FD RLLK V+KTVDVSYGGE+GFNQAIELS E LG+VKLVQEKRLLQ+YFDEISQDTGKYCFMV DTLKGL+LGA+ETLIVWENLD++R TLR+++    +K++HL  EQ+ N+S+F+D ++G E E +D I+ VEW+ANNYK+FG +LEFVTNRSQEGSQFCRGFGGIGG+LRW+VDF +L+   EA    DD
Sbjct:    6 AADAQAVQVEIWKVKKLVKSLTAARGNGTSMISLVIPPRDQISRITKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLYSKVPTNGLVVYCGTILTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALNELLEDDDKFGFIIMDGNGALYGTLQGNNREVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQFFITNDKPNVAGLILAGSADFKSELQNSEMFDNRLLKVVIKTVDVSYGGETGFNQAIELSAETLGSVKLVQEKRLLQRYFDEISQDTGKYCFMVSDTLKGLELGAIETLIVWENLDMDRITLRDSSGNTPDKIIHLNKEQQANDSYFKDEKSGIEYEIVDTISFVEWLANNYKSFGTSLEFVTNRSQEGSQFCRGFGGIGGILRWRVDFMELEANEEAAEFADD 437          
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Match: A0A8J2SAF2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAF2_9STRA)

HSP 1 Score: 677 bits (1748), Expect = 2.230e-241
Identity = 337/439 (76.77%), Postives = 382/439 (87.02%), Query Frame = 1
Query:  184 ADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQISRVGKMLADEYGTASNIKSRVNRLSVLGAITS--------------TQQRLKLYNKVPPNGLVIYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDDRFGFIVMDGNGCLYG---TLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDPRLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEISQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNRSQEGSQFCRGFGGIGGLLRWQVDFAQLDEA 1449
            ADDA D+QVE+WK+KKL+KSL  ARGNGTSMISLVIPP DQISRV KMLADEYGTASNIKSRVNRLSVLGAITS              TQQRLKLY++VPP+GLV+YCGTIMTDEGKE+RVNIDFEPFKPINTSLYLCDNKFHTEALDELL+DD++FGFI+MDGNG LYG   TLQG++R+V+HKF+VDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAE A Q FIT +K N  GLV+AGSADFKSEL TSD+FD RL + V+K VDVSYGGE GFNQAIELS E LG+VKLVQEKRLLQK+FDEISQDTGKYCFMV DTL+ L+LGAVETLIVWENLDI+R  LRN+   E++VLHL+ EQ+ +E +F D  +G ELE I+K+ LVEW+ANNYK+FG TLEF+TNRSQEGSQFCRGFGGIGG+LRW+VDF ++D A
Sbjct:    2 ADDAHDKQVEIWKVKKLVKSLTLARGNGTSMISLVIPPRDQISRVAKMLADEYGTASNIKSRVNRLSVLGAITSEHHRKFKLYNDYAGTQQRLKLYSRVPPHGLVVYCGTIMTDEGKERRVNIDFEPFKPINTSLYLCDNKFHTEALDELLEDDEKFGFIIMDGNGSLYGNTSTLQGNNRDVLHKFSVDLPKKHGRGGQSALRFARLRLEKRHNYVRKVAELAVQMFITADKPNVSGLVLAGSADFKSELQTSDMFDQRLARIVIKMVDVSYGGEIGFNQAIELSAETLGSVKLVQEKRLLQKFFDEISQDTGKYCFMVVDTLRALELGAVETLIVWENLDIDRIKLRNHAASEDRVLHLSKEQQAHEHYFHDSVSGVELEEIEKLPLVEWLANNYKSFGTTLEFITNRSQEGSQFCRGFGGIGGILRWRVDFLEIDMA 440          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|6646 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CQL8_9STRA0.000e+0100.00Eukaryotic peptide chain release factor subunit 1 ... [more]
D7FIB3_ECTSI1.350e-27384.99Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2UVJ2_9STRA1.300e-25382.82Eukaryotic peptide chain release factor subunit 1 ... [more]
F0YK48_AURAN3.500e-24780.24Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A812U0R4_SYMMI1.260e-24477.23Eukaryotic peptide chain release factor subunit 1 ... [more]
W7TWS4_9STRA1.990e-24474.62Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7R9U8Q0_9STRA2.530e-24477.96Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S3MEB0_9STRA1.780e-24375.91Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S3NJC5_9STRA2.730e-24377.55Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A8J2SAF2_9STRA2.230e-24176.77Eukaryotic peptide chain release factor subunit 1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_109contigContig_109:497383..502567 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|6646|CE6645_84
KEGG TC1.A.33.1
BRITEko00000,ko00001,ko03012,ko03019,ko03029,ko03110,ko04147
KEGG Pathwayko03015,ko03018,ko04212,ko05152,map03015,map03018,map04212,map05152
KEGG koko:K03265,ko:K04043
GOsGO:0000184,GO:0000956,GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003747,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006401,GO:0006402,GO:0006412,GO:0006415,GO:0006417,GO:0006449,GO:0006464,GO:0006479,GO:0006518,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0008022,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0008213,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016149,GO:0018130,GO:0018444,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0022411,GO:0023052,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0032774,GO:0032984,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036211,GO:0036464,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051246,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990825,GO:1990904,GO:2000112
Preferred nameETF1
Descriptiontranslation release factor activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1503@1|root,KOG0688@2759|Eukaryota
Evalue1.42e-275
Seed ortholog2880.D7FIB3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioneukaryotic peptide chain release factor 1
Ec32 orthologEc-11_001250.1
TranscriptId6968
TrackFilteredModels1
ProteinId6646
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6646gene_13026Tribonema minus UTEX_B_3156 geneContig_109 497383..502567 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|6646Trimin1|6646|CE6645_84Tribonema minus UTEX_B_3156 polypeptideContig_109 497438..502411 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13026_8exon_13026_8Tribonema minus UTEX_B_3156 exonContig_109 497383..497515 -
exon_13026_7exon_13026_7Tribonema minus UTEX_B_3156 exonContig_109 498200..498334 -
exon_13026_6exon_13026_6Tribonema minus UTEX_B_3156 exonContig_109 499093..499275 -
exon_13026_5exon_13026_5Tribonema minus UTEX_B_3156 exonContig_109 499751..499882 -
exon_13026_4exon_13026_4Tribonema minus UTEX_B_3156 exonContig_109 500384..500779 -
exon_13026_3exon_13026_3Tribonema minus UTEX_B_3156 exonContig_109 501501..501641 -
exon_13026_2exon_13026_2Tribonema minus UTEX_B_3156 exonContig_109 502009..502137 -
exon_13026_1exon_13026_1Tribonema minus UTEX_B_3156 exonContig_109 502262..502567 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13026UTR3_13026Tribonema minus UTEX_B_3156 three_prime_UTRContig_109 497383..497437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13026CDS_13026Tribonema minus UTEX_B_3156 CDSContig_109 502262..502411 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_13026UTR5_13026Tribonema minus UTEX_B_3156 five_prime_UTRContig_109 502412..502567 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1555bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCAAAGCGTTCTTAGGCTAGTACAGCTTCCGCAGGCAGCGCTACAGACTG
AGACAGCTAGCTTCAGCAACATCTGTTGCCGTCGATTTAGTCCATCCTCT
TGCCGTTTCGCTGAGGTATCGAGCACCAGAAGGAGGCTCTACTTTCATCA
GGTACCATGAGCTCGGCGAAGAGCGCCGCACCGGCGGACGATGCTGGGGA
CAGGCAGGTGGAGATGTGGAAAATCAAAAAGCTCATCAAGTCGCTGCAGA
AGGCGCGCGGCAACGGCACATCCATGATCAGCTTGGTCATTCCTCCAGGA
GACCAGATCTCAAGGGTCGGAAAAATGCTTGCCGACGAATATGGCACGGC
GAGCAACATCAAATCGCGAGTCAACAGACTCTCTGTTTTGGGCGCCATTA
CCTCCACACAACAACGGCTCAAGCTGTACAACAAGGTGCCGCCCAACGGC
CTGGTGATCTACTGCGGGACCATAATGACGGACGAGGGGAAGGAGAAGCG
TGTCAACATTGACTTTGAGCCTTTCAAGCCCATCAACACCAGTCTCTACC
TCTGCGACAACAAGTTTCACACAGAGGCCCTGGACGAGCTGCTCCAGGAC
GACGACAGGTTCGGCTTCATCGTCATGGACGGCAACGGCTGCCTCTACGG
CACGCTGCAAGGCAGCCACCGCGAGGTCATACACAAGTTCACGGTGGATC
TGCCCAAGAAGCACGGACGCGGTGGTCAGTCCGCGCTGCGTTTCGCGCGC
CTGCGACTCGAGAAGCGCCACAACTACGTGCGCAAGGTCGCGGAGTTTGC
CACGCAGTTTTTCATCACGGACAACAAGTGCAACTGCGTGGGGCTGGTGA
TGGCGGGGTCTGCGGACTTCAAGAGTGAACTCATGACGTCGGACCTGTTT
GACCCGCGCCTGCTCAAGCACGTGGTCAAGACGGTCGATGTCAGCTACGG
AGGGGAGAGCGGCTTCAACCAGGCCATTGAGCTGTCCGGCGAGGCTCTGG
GCAACGTGAAACTGGTGCAGGAGAAGCGGTTGCTGCAGAAGTACTTTGAC
GAGATCTCACAAGACACGGGCAAGTACTGCTTCATGGTCGACGACACCCT
CAAGGGATTGGACCTGGGAGCAGTGGAGACATTGATAGTGTGGGAGAACC
TGGACATCAACAGGTACACTCTGCGCAACAACACAACACAGGAGGAGAAG
GTTCTGCACCTCACACCGGAGCAGGAGCGGAACGAGAGCCATTTCAGAGA
TGGGGAAACAGGGGCAGAGCTGGAGACTATTGACAAGATAGCACTTGTGG
AGTGGATAGCCAACAACTACAAGAACTTTGGAGCAACGCTGGAGTTTGTG
ACCAACCGGAGCCAGGAGGGCAGCCAGTTTTGCCGGGGGTTTGGGGGGAT
TGGGGGGCTGTTGCGATGGCAGGTGGACTTTGCACAACTGGATGAAGCAA
TGCACGAGGAGGACGACGATGAGTGGGGCAACGACATGGATGGGTTTTAA
GGCTTTACCCAGGGGAGATACTCAGACACGCGCATGTGTTTTACCCCTTT
CATCA
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protein sequence of jgi.p|Trimin1|6646

>Trimin1|6646|CE6645_84 ID=Trimin1|6646|CE6645_84|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=448bp
MSSAKSAAPADDAGDRQVEMWKIKKLIKSLQKARGNGTSMISLVIPPGDQ
ISRVGKMLADEYGTASNIKSRVNRLSVLGAITSTQQRLKLYNKVPPNGLV
IYCGTIMTDEGKEKRVNIDFEPFKPINTSLYLCDNKFHTEALDELLQDDD
RFGFIVMDGNGCLYGTLQGSHREVIHKFTVDLPKKHGRGGQSALRFARLR
LEKRHNYVRKVAEFATQFFITDNKCNCVGLVMAGSADFKSELMTSDLFDP
RLLKHVVKTVDVSYGGESGFNQAIELSGEALGNVKLVQEKRLLQKYFDEI
SQDTGKYCFMVDDTLKGLDLGAVETLIVWENLDINRYTLRNNTTQEEKVL
HLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTN
RSQEGSQFCRGFGGIGGLLRWQVDFAQLDEAMHEEDDDEWGNDMDGF*
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mRNA from alignment at Contig_109:497383..502567-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5185bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )
GCAAAGCGTTCTTAGGCTAGTACAGCTTCCGCAGGCAGCGCTACAGACTG AGACAGCTAGCTTCAGCAACATCTGTTGCCGTCGATTTAGTCCATCCTCT TGCCGTTTCGCTGAGGTATCGAGCACCAGAAGGAGGCTCTACTTTCATCA GGTACCATGAGCTCGGCGAAGAGCGCCGCACCGGCGGACGATGCTGGGGA CAGGCAGGTGGAGATGTGGAAAATCAAAAAGCTCATCAAGTCGCTGCAGA AGGCGCGCGGCAACGGCACATCCATGATCAGCTTGGTCATTCCTCCAGGA GACCAGGCAAGTTGCTGGCGCCACATTGGGTCACATTGCTGGTCCTTCCG AGTCGCGGATGCTAGGCGCAAGAGCGCTGAACAAATTCTGACCACTTTGC TGGTCTTGCATGCGATTCTTCTCTCTGCAGATCTCAAGGGTCGGAAAAAT GCTTGCCGACGAATATGGCACGGCGAGCAACATCAAATCGCGAGTCAACA GACTCTCTGTTTTGGGCGCCATTACCTCCACACAACAACGGCTCAAGCTG TACAACAAGGTCAGTCGCACAATTATTCCGCGAGAAAATCAGTTCACTGT GCCAATGGCTTCCACGTTTTGCTAAGTGTACGTTCCATCAGGCCTTGCAG CGCAAGCATTGTGTCTTTGTTGAAGGCTGGTATGCTTTTGTGGACCTGAG CATGTTCGAAAGCAAAACTGCCATCACCAGCAGCAGAAGAGATCAGATAG CAAACTCTTGCACGTTATGTCCTGCCATCAATATTGATTTGGACGACAGA ACACGGCTTGGTATGGTGTTGGGCCTTTTCATTGAGTTGCGGATACAGGC ATTTGAGTTGAAAACGTGGCCTTGTTCTTCAGCATCCCTTGCACGTGCGC ACGTGATGCGTTTGTGTGTGTTGCAGGTGCCGCCCAACGGCCTGGTGATC TACTGCGGGACCATAATGACGGACGAGGGGAAGGAGAAGCGTGTCAACAT TGACTTTGAGCCTTTCAAGCCCATCAACACCAGTCTCTACCTCTGCGACA ACAAGTTTCACACAGAGGTACGGCGCCACAGCAGAGACACTGTTGCAGGG CATGTTGGTATTAACATATTGCTGTATTGACCGGGGTGGCGGGCGCATCG TGCCTTGCTCAGGCAGCCACTGCGCGGCCCAGTGACAACACTGGCTGCAC TGCGACCAGCTGCTAGCAGCCGAGGTGCATACGTGTTTTTCGGTTTCTAG TGTGCGAGAGCCTCCTAACATTGTTGCAAGTATGCAATGCAGTATATGAA CGTTATGTTGCATGTTGCAGGAACGCAAGCCACCTTGCTTCTTGCATTCA GACACGGGTCACAGGCCTGCTGCTCTGGAAGCTCGAGTTACGTATGTTGA GTGTCCATCACCTGCTGTTGCGCGTGCTTCATGCGCTCAAAGTCCTTAGG GTTAGGGTTAGGGTCAGGGTTACATGTGCTCATGCACGCACACTCCTGCA TGCCTTGCTCAGAGACATACACGAAGATGATGATGTTATTAATGACTTCT CTCTGTGCTGCACGGCTTCCATCGTGCTATCCTCGCACTCATTATCTTCG CACTTGTTCATCCATGCATGAAACACAGCACATTCATACACATCTGCTCC ATTATCTTCAGGCCCTGGATGAGCTACCTGCGGACGAGTACAGATTACAC CTCGCCAGATTTAACCTGGTCCTGCATTGCTTCATCATGCATGCAACGCA GCAAATTCATCATCATAACCATCCGTGTTCATGCGCAGGCCCTGGACGAG CTGCTCCAGGACGACGACAGGTTCGGCTTCATCGTCATGGACGGCAACGG CTGCCTCTACGGCACGCTGCAAGGCAGCCACCGCGAGGTCATACACAAGT TCACGGTGGATCTGCCCAAGAAGCACGGACGCGGTGGTCAGTCCGCGCTG CGTTTCGCGCGCCTGCGACTCGAGAAGCGCCACAACTACGTGCGCAAGGT CGCGGAGTTTGCCACGCAGTTTTTCATCACGGACAACAAGTGCAACTGCG TGGGGCTGGTGATGGCGGGGTCTGCGGACTTCAAGAGTGAACTCATGACG TCGGACCTGTTTGACCCGCGCCTGCTCAAGCACGTGGTCAAGACGGTCGA TGTCAGCTACGGAGGGGAGAGCGGCTTCAACCAGGTGAGTGAAAGCAGGT CTTGCTCAACGTGTGCTCAGTAATGATCGACCAGTTAAGCACATGGCTGC CCTTGGTTGTGAACATATTTGAGCAGGCCGCATGCTATTGCTTTCCACTG GAACCCTCCATGTCGTTGCACGGCAAATGCACCATGAGCTGGTATGTTCT GGGTCATTGGTACATGTACATTTGGTTGGTGTTGCATGCGACGCTTGGCG ATTGCGCGTGTGCTGTTGGGGCATGTAGTCAAAGGCAGCAAACAACCAGA AACAATGCTTGAGCAACAAGTCGGGCTGACCAATATGGCTACCGATGTTG ACATGATAGGCTAGCGTGTGCGTGCTTATGCCATGTCTTCTCACCGACGT TTACATCGGTGTGCCTGTATGTGCCATAGTCATTGTTTGATGCTCACACT GGTCATGGACTTGCAGTGCACATATTTCAAGTTGCGTGCCACATCACTTG TTGACACCAACCCTGGTGTTGTGTTGTATCCTCAGGCCATTGAGCTGTCC GGCGAGGCTCTGGGCAACGTGAAACTGGTGCAGGAGAAGCGGTTGCTGCA GAAGTACTTTGACGAGATCTCACAAGACACGGGCAAGTACTGCTTCATGG TCGACGACACCCTCAAGGTTAGTGCTTCATGTTTATCAATGCGGTGGTTT ATGCAGCACTGCAAGAGTTCTGCTTTGTGTTGGGGTGAGGTCTAGGGCTA GTGTTCAGTGCATGACTGGCACTTGTGGAAGTTCCCTTGCTGTGCATAGA GAGCTTTGCCATTTCACGTTTGTATGCCAATGGCTCACTGTGTCTGCATG ACTTCTTTGGTCATCACTGATACACAACAGCTTAAATGCGCTACCCCTGA GTACATTGCATCATCAACGCTCAACATGTCCATATGCAAAGGCAAATGAA GTGCACACAATCAGGTACTCGCATCGGGTGCCTTGTTGCCGCTTGCCTGC TGTGCTAGCACAGCACTTGCGTGGGCAAGTTGAGTTGAATGCATCAATTG CTGTGCAACTTCTTGCAGCAATCCCCTCCCTTGGCGAGAGTAACAGTATT GTTGAAGTTGAACTTTGTTGTGAAACCTGGCCGCGATTGCAGGGATTGGA CCTGGGAGCAGTGGAGACATTGATAGTGTGGGAGAACCTGGACATCAACA GGTACACTCTGCGCAACAACACAACACAGGAGGAGAAGGTTCTGCACCTC ACACCGGAGCAGGAGCGGAACGAGAGCCATTTCAGAGATGGGGAAACAGG GGCAGAGCTGGAGACTATTGACAAGGTGAGGTTGCCACAGTCATTGTAGC GCAGGGGTTGGGTCAAAAGCAACATGTGCGAGGCGGGTTAAGGTTAGATT GTGGTAGGGTTAAGTTAGTGACAGGCTTGAAGTTTTGAGCAGGCTTGCAG TGCTGCTTCTGCACCATGGCTTTGTGGGTATACCGCAGGGTGGTCTCTGG AGAGCCATGTGTACAAAGGTGGTCACACTGCACACTTGATGCGCACTTCA ATGTGTAGAGGGATCTCAACTGTGGCTAGGTTGACAGTGACAGTAGACAG GTGTCAAGGCAGACTTGGGTACACGTGGTGTGCTGCTGCTGCTCGGTGTG TTCCAAACATGATAAGTGAGTCACGTGCACGGCAGGGAATACCTAATCAG TGACTCAGCCACGACACTCATCCCAAACGCCCTGTCAAGCTCAATCTTGT AAGAATTCGGTAAGTTCTGCAGATAGCATGTGAGCTGAATAAACACTTGC GCAAAAACAGCTTACTGCAGCAGCAGCATCGCAAGTTCAGGGTCGGTACT TCAAGGCATCATATGCACGTTGTGTACGAATCATGGCCTAACCCTAACCC TAACCCTAATGTGTACTCTTGCGAGCGTAGGGTTTGGGCTAGTTTGTTCT ACTGTAAAGGCGTTCCTGCATCTGTGGCAATATGAAGTCACACATTTGCC AGCCTGACACGACATGATAATGATTCCAGCTTTTTTCCTGCTGACTTGCA ATCTGGCTGTCCTGCCATACTTTGTCCCCACAGATAGCACTTGTGGAGTG GATAGCCAACAACTACAAGAACTTTGGAGCAACGCTGGAGTTTGTGACCA ACCGGAGCCAGGAGGGCAGCCAGTTTTGCCGGGGGTTTGGGGGGATTGGG GGGCTGTTGCGATGGCAGGTATGTGTGTTCCCTGATAGCATTATACTACA AACAGGGCGCCCATCGGTGACCTGTACATACATTTATTGTAGATCGCTGT GTGTTTTGTAGACGATTCAATCATAACATCATTATACCTGCAACTTGAGG GCAGTTGTGTTGGAAGCGGTGGCATTATATCCACTTTGAGGCCGGTTGTG TAGCGAGTGGTGACAATTGCTGGCGTTGCCCGCTTGTACCATTTGATGTG CACTTTAGCAGGTGTATTTCAAAGGCTTACACTTTGGTATGCGCTCCATG CCTGCATCTCAACCTCACAAAGCGGGGCTTATATGCATGATTTTGACCAC TTGGCCCCATTGGGTTAGGTTCCGTTTGGCATATACTCCGAAGTATGTAC CCAACACATTACGGTCAGCATTATGGTCTTTTAACCACCCTGTGTCAGCG GTGGACACAACCTCTAGACTGCGTGCTTCCTCATCTTTTGGCGTTGCTTG CATTGCACAAGTGCAGCCAGAAGGTTAGGAACAGGGTCAGGCTTAGGAGT AGGGTTAGGGCCAGGTCTAGGGCTGAGGCTTCAAGAGTGCTCCTGCAGCT TGTTGTGATTGCTGCAACCACACATAGCATGCATCTGACTTGAAGTACTT CGCAATTGCTCAACTCAGTATACCACCCCGCTGACTCGTGTCTTGGCCTC AGGTGGACTTTGCACAACTGGATGAAGCAATGCACGAGGAGGACGACGAT GAGTGGGGCAACGACATGGATGGGTTTTAAGGCTTTACCCAGGGGAGATA CTCAGACACGCGCATGTGTTTTACCCCTTTCATCA
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Coding sequence (CDS) from alignment at Contig_109:497383..502567-

>mRNA_13026 ID=mRNA_13026|Name=jgi.p|Trimin1|6646|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1344bp|location=Sequence derived from alignment at Contig_109:497383..502567- (Tribonema minus UTEX_B_3156 )
ATGAGCTCGGCGAAGAGCGCCGCACCGGCGGACGATGCTGGGGACAGGCA
GGTGGAGATGTGGAAAATCAAAAAGCTCATCAAGTCGCTGCAGAAGGCGC
GCGGCAACGGCACATCCATGATCAGCTTGGTCATTCCTCCAGGAGACCAG
ATCTCAAGGGTCGGAAAAATGCTTGCCGACGAATATGGCACGGCGAGCAA
CATCAAATCGCGAGTCAACAGACTCTCTGTTTTGGGCGCCATTACCTCCA
CACAACAACGGCTCAAGCTGTACAACAAGGTGCCGCCCAACGGCCTGGTG
ATCTACTGCGGGACCATAATGACGGACGAGGGGAAGGAGAAGCGTGTCAA
CATTGACTTTGAGCCTTTCAAGCCCATCAACACCAGTCTCTACCTCTGCG
ACAACAAGTTTCACACAGAGGCCCTGGACGAGCTGCTCCAGGACGACGAC
AGGTTCGGCTTCATCGTCATGGACGGCAACGGCTGCCTCTACGGCACGCT
GCAAGGCAGCCACCGCGAGGTCATACACAAGTTCACGGTGGATCTGCCCA
AGAAGCACGGACGCGGTGGTCAGTCCGCGCTGCGTTTCGCGCGCCTGCGA
CTCGAGAAGCGCCACAACTACGTGCGCAAGGTCGCGGAGTTTGCCACGCA
GTTTTTCATCACGGACAACAAGTGCAACTGCGTGGGGCTGGTGATGGCGG
GGTCTGCGGACTTCAAGAGTGAACTCATGACGTCGGACCTGTTTGACCCG
CGCCTGCTCAAGCACGTGGTCAAGACGGTCGATGTCAGCTACGGAGGGGA
GAGCGGCTTCAACCAGGCCATTGAGCTGTCCGGCGAGGCTCTGGGCAACG
TGAAACTGGTGCAGGAGAAGCGGTTGCTGCAGAAGTACTTTGACGAGATC
TCACAAGACACGGGCAAGTACTGCTTCATGGTCGACGACACCCTCAAGGG
ATTGGACCTGGGAGCAGTGGAGACATTGATAGTGTGGGAGAACCTGGACA
TCAACAGGTACACTCTGCGCAACAACACAACACAGGAGGAGAAGGTTCTG
CACCTCACACCGGAGCAGGAGCGGAACGAGAGCCATTTCAGAGATGGGGA
AACAGGGGCAGAGCTGGAGACTATTGACAAGATAGCACTTGTGGAGTGGA
TAGCCAACAACTACAAGAACTTTGGAGCAACGCTGGAGTTTGTGACCAAC
CGGAGCCAGGAGGGCAGCCAGTTTTGCCGGGGGTTTGGGGGGATTGGGGG
GCTGTTGCGATGGCAGGTGGACTTTGCACAACTGGATGAAGCAATGCACG
AGGAGGACGACGATGAGTGGGGCAACGACATGGATGGGTTTTAA
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