mRNA_13024 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352125
Unique NamemRNA_13024
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A836CNP5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNP5_9STRA)

HSP 1 Score: 795 bits (2052), Expect = 8.770e-290
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 3
Query:   63 MELRGVWMLLALVAGTWATSSAAATSNASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLLLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAILAPWGCSN 1259
            MELRGVWMLLALVAGTWATSSAAATSNASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLLLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAILAPWGCSN
Sbjct:    1 MELRGVWMLLALVAGTWATSSAAATSNASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLLLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAILAPWGCSN 399          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: D7FKM8_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM8_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 4.220e-69
Identity = 168/432 (38.89%), Postives = 216/432 (50.00%), Query Frame = 3
Query:  141 NASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFR----------AGEQLEHFASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTP-------------------------------------ED---------TMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPL--------LLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFT-VETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAILA 1241
            N  + RKID S    +V T Y V+G   SY+F +P      LA M V ++     F           AGE L     Y  A+  +      VK+   AVYTDVL   PKEI Q E+Q + +  T   PSPY T+ +TT + LA           +   V    V YGP+ D+ P                                     E+          M GGFSR+D+ A+          +FR+L A +P  A DIYYRDNIGNISTS +        L VL +R+PMYGGWK AWYQGYN+P++ GL  + +   +TL M FG PF  +WVEDLT+KVILPEGA ++ A  PF  V  ++T R T+LD+    GR V+IM+  NVV EHN+  KV Y F R  M+ EPLLL G  LA FL A+ A
Sbjct:   30 NTQVQRKIDVSTQFAKVVTTYTVKGTSGSYKFALPADAQDHLAFMSVTMDKAELEFELDAPSPGRDSAGEGL---VLYSAAVE-RPQDKEEVKIAVKAVYTDVLTAFPKEITQLEEQSVVFASTLLAPSPYKTVKQTTTLKLASPKILSMTEAPSKRSVKSDQVTYGPFEDVPPFADGGELRIHYVNHAAFAKATSCLREIEVSNWGNIAVEEHYDLVHAGAKMKGGFSRMDYMAKK--HAELPNPSFRKLDAYLPAGASDIYYRDNIGNISTSTVRHNLGAVELSVL-SRFPMYGGWKNAWYQGYNLPTEAGLRHSGS--HFTLEMPFGPPFPSVWVEDLTVKVILPEGAHNIVALPPFEGVSEARTERFTFLDTTG-SGRPVVIMKMKNVVKEHNVMLKVTYDFNRARMMMEPLLLAGFFLACFLAAMAA 451          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A7S3Y5N0_HETAK (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5N0_HETAK)

HSP 1 Score: 229 bits (585), Expect = 9.010e-67
Identity = 161/431 (37.35%), Postives = 220/431 (51.04%), Query Frame = 3
Query:  123 SAAATSNASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGGK---ATAGGTVKVETV-AVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDV------LLAEQSPREYHTGVT----------------------------PWRVLQ---KTVAYGPYTDLTPEDT---------MAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLL---------LVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAIL 1238
            SAA   N+ I R IDA ++VV+++T Y + G    Y    P +   R+A         Y A  AG+  +   S      G    +T  GT K+ TV AV  +  E  P EI Q E Q++ Y DT  VPSPYPT ++TT +       L+ Q   +  +G T                            P  V     + +    + ++  E+          + GGFSR+D   + L        AF  L A IP  AR IYYRD IGN+S+S +          L +  R+P++GGWKT WYQG+N+PS+ GL+  S  G YTL+ +FG+PF+++WVED  +KVILPEGA D+   VPF VE  ++ R TYLD+PL+GGR ++ +RK NVV EHN  F V Y F    MLHEPL+ V    A F +AIL
Sbjct:   35 SAAEWINSEITRTIDAKEHVVRIKTEYVLNGGKGEYLVAYPAEFADRIA---------YIAAEAGKGKDIPISQKEIKDGLVFFSTDLGTSKLLTVSAVIVNPFEMLPAEITQQEPQFVVYEDTELVPSPYPTETQTTKLKLPSKNTLSVQPEEDKRSGATLTFGPHDNTAALAAGAFGSLRAHFMNNFPAAVAHDVFREIEVSHWGNVAVEELYEVRHAGARLKGGFSRIDFMQKRL----RESPAFTALTARIPAEARGIYYRDQIGNVSSSDIRPAAVAGQIELEIRPRFPLFGGWKTEWYQGWNLPSEAGLT-RSEGGRYTLTADFGIPFKDVWVEDHQVKVILPEGATDIEVRVPFEVEEGRSSRATYLDTPLMGGRPIVTLRKLNVVREHNRPFTVSYTFRPHYMLHEPLVCVAFFAALFALAIL 451          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: K3W6J7_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6J7_GLOUD)

HSP 1 Score: 213 bits (542), Expect = 1.650e-60
Identity = 153/444 (34.46%), Postives = 225/444 (50.68%), Query Frame = 3
Query:   87 LLALVAGTWATSSAAATSNASIARKIDASKNVVQVRT---IYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLE-----HFASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMA-----------------------------------------------GGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLL-------LVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVE--TSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFL 1226
            +LAL+A   A +  AA  N S+ R +D +K+VV+V+T     +       Y F +P+     L+ +      N         ++     + A Y V L  K   G T  V+  + +T VL P P+EI Q E+Q + Y D+  + SPY T ++TT V L       + + + P       ++YGPYT+  P  + A                                               GGFSR ++ AQ        GA+F  + A +P  A ++YYRD IGN+STS L        L   +R+P++GGWKT WY GY++P+   LS +    ++ L ++F    E   V+DLT+KVILPEG+ +++A++PF V+  T  TRR TYLD+PL+G R VLI+ K NV+A HN+ F+V ++F +  MLHEPLLLV A LAFFL
Sbjct:    1 MLALLALFCAANVDAAVINTSVKRVLDLTKHVVRVQTDIQFVDAEQDTKEYVFGLPKDKAKHLSQLVAKCGKNPCEVVPATHVDANAHPNVAQYTVVLKNKVAKGETGHVKLTSYFTRVLTPFPEEITQKEEQLVVYEDSHLLLSPYTTETQTTKVKLPSGRVESF-SQIQPVTRKGAMISYGPYTNAEPFSSDAKSLRVHFKNHSPFMTVTNLVREIEVSMWGRVSVEEVYDLLHTGAKLKGGFSRYEYTAQN-----ERGASFHDMQAYLPKDAVNVYYRDQIGNVSTSRLRVTSTRQELAFKSRFPIFGGWKTQWYLGYSVPTHSVLSRDG--DKFKLEIDFSTSIEGAAVDDLTVKVILPEGSTNLQANLPFAVDSITDNTRRQTYLDTPLVG-RPVLIISKKNVIAAHNVPFEVTFEFPQTFMLHEPLLLVSAFLAFFL 435          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A8K1FFD1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFD1_PYTOL)

HSP 1 Score: 212 bits (539), Expect = 4.450e-60
Identity = 149/426 (34.98%), Postives = 221/426 (51.88%), Query Frame = 3
Query:  141 NASIARKIDASKNVVQVRT---IYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYA-AFRAGEQLEHFAS--YDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTP--------------------------------------------EDTMA---GGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLL-------LVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVET-SQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAI 1235
            N S+ R +D +K+VV++++     +   A + Y F + + +  RLAH+      N     ++ E  E      Y V L      G T  ++  A +T VL+P P+EI Q E Q + + D     SPY T ++TT V L       Y + + P      T+ YGPY ++ P                                            E T A   GGFSR+D+  QM G   + GA+F  L A +P  A ++YYRD IGN+STS L        L    R+P++GGWKT WY G+++P+   LS + +  ++ L ++F    EE  V+DLT+KVILPEG+ +V+ ++PF V+  ++T R TYLD+PL G R VL++ K NV+A+HN+ F+V + F +  MLHEPLLLVG  LAFF+V +
Sbjct:   22 NTSVKRVVDLTKHVVRIQSDIQFVDAEDATNEYSFALSKSMGERLAHVTAKCGKNACEVVKSAESAESSLVDLYTVVLQNSVPKGETGHIKLNAHFTRVLKPFPEEITQKEDQLVVFEDGHLFASPYLTETQTTKVKLPSGRIESY-SNIQPVTQKGATITYGPYENVEPFVAPSNSLRVHYKNHSPFLTVTNLVKEIEVSMWGRVSVEEVYDLEHTGAKLKGGFSRLDY--QMHG---ARGASFYELRAYLPRDAVNVYYRDQIGNVSTSRLRQTETRQELQFKPRFPIFGGWKTQWYFGHSVPTHSVLSRSGS--KFKLEVDFSTSIEEAAVDDLTVKVILPEGSTNVQVNLPFEVDAQTETSRQTYLDTPLFG-RPVLVIHKKNVIAQHNVPFEVTFDFAQSFMLHEPLLLVGGFLAFFVVCM 438          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A7S3LZI6_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZI6_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.310e-58
Identity = 117/336 (34.82%), Postives = 184/336 (54.76%), Query Frame = 3
Query:  390 VETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDT---------------------------------------------MAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSP--------LLLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAIL 1238
            ++  +V+T +LEP+P EI Q E Q++R  D+ Y  SPY T ++ T V LA  +   + T + P+     ++ +GPY ++ P                                                +AGGFSR+D+  QM+  G  +  +FR ++A +P  A  IYYRD IGNISTS         L L L++R+P++GGWKT +Y GY++P+++ ++ + A   Y L ++F   F+ +WVED+ +KV+LPEG  +++ +VP+ VE S  RR TYLDS L GGR V+I+R  N+V+EH+ +  + Y F +  +  EPL+LV     FF++  L
Sbjct:   35 IKVSSVFTSILEPYPAEITQREPQFIRLKDSHYFLSPYATETQKTTVKLASPTVESF-TKLAPFTNRGNSLQFGPYENIAPYSASEASVHYLNNFPFAKFSTMTRELEVSHWGSIAVEEIYELQHAGAKLAGGFSRIDY--QMMRGGPGASPSFRSVVATLPAQASGIYYRDQIGNISTSTVRHLPDGELELELESRFPIFGGWKTQFYLGYSVPTENWITTDGAD-RYNLKLDFFTAFDNVWVEDMELKVVLPEGCENIKVNVPYAVEQSSARRFTYLDSELNGGRPVIILRAKNLVSEHDKQVTISYTFAKKRIYVEPLMLVATFFVFFVLCSL 366          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: W7TIB7_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIB7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.050e-57
Identity = 162/437 (37.07%), Postives = 217/437 (49.66%), Query Frame = 3
Query:  126 AAATSNASIARKIDASKNVVQVRTIYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAF----RAGEQLEHFASYDVALG---GKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTD--------LTP-------------------------------ED---------TMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLL-------LVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATG---EYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTV-ETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAIL 1238
            A A  N  + RKID S  VV++            Y     + L  +L+ +++ +      +     AG+ L HF + +V  G    K T  GT+           L P P EI  TE Q ++Y D+   PS YPT  +TT   L   S  E  T   P+    K + +GP TD        L+P                               ED          + GGFSR+D +A    RG  S  A R L+A +P  AR IYYRD IGNISTS +        L L +R+P+ GGWK  +YQGY++P Q+ L+V  ++G    +TL++ F VPF E+WVEDLT+KV+LPE A DVR ++PF+V E  QT R T+LDS L GGR VLI++K NVVAEH     + Y F    ML EPL LV A  +FFLV ++
Sbjct:   31 AQAQKNIEVVRKIDLSSAVVRIDMTILANDLNGKYVVSFAKHLAPKLSFLQIAMGNQPLPWIRLPDAGDGLAHFQA-EVPQGMTEAKLTVFGTL--------AGALVPVPAEIELTENQLVQYLDSHTFPSLYPTARQTTTFALGV-SHIESFTKRDPYSRTGKDLVFGPITDIEGGAAASLSPITIHYQNNAPFVKALQAIREIEVSHWGNVAFEDFVEVKHAGAALKGGFSRLDFQA----RGAPS--AVRGLVAVLPLGARSIYYRDQIGNISTSVIQHGPDGVELNLQSRFPLVGGWKNQFYQGYSVPVQELLTVGPSSGGVRRFTLTVPFSVPFPEVWVEDLTVKVVLPEWAADVRVEIPFSVDEEHQTHRLTFLDSSLSGGRPVLILKKRNVVAEHMQPMVLSYSFPTRAMLLEPLYLVLAFFSFFLVCMI 451          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A2D4BXN7_PYTIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXN7_PYTIN)

HSP 1 Score: 205 bits (522), Expect = 1.380e-57
Identity = 154/449 (34.30%), Postives = 225/449 (50.11%), Query Frame = 3
Query:   81 WMLLALVAGTWATSSAAATSNASIARKIDASKNVVQVRT---IYNVRGAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEH-----FASYDVALGGKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTP--------------------------------------EDT---------MAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLLLVLDTR--------YPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTV-ETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAI 1235
            W+ L+L+A   A ++ AA  N S+ R +D +K+VV++++     N     S Y+F + +++  RLA +     G  A        +H        Y V L      G T  V+  + +T VL P P E+ QT++Q + + DT  +PSPY T ++TT V L       Y + V P       V YGPY +  P                                      E+          + GGFSR D+ A+      + GA+F  L A +P  A ++YYRD IGN+STS L  V DTR        +P++GGWKT WY GY++P+   ++    T  + L M+F    E+  V+DLT+KVILPEG+ +V+  VPF V E  +T R TYLD+ L+G R V+++ K NVVA HN   +V +++    MLHEPLLLV   LAFF+V +
Sbjct:    4 WLPLSLLA-LAAAAADAAIINTSVKRLVDLTKHVVRIQSDIQFVNDDADTSVYEFALSKRMSERLAFVSAKC-GKIACEVVKADHDHGDDSDVGLYSVVLQDSVPKGETGHVKLTSYFTRVLTPFPAEVAQTDEQLVVFEDTHVMPSPYLTRTQTTKVKLPSGRIESY-SDVAPVTHKGSVVTYGPYENAEPFVAPRNALRVHFKNHSPFMTVTSLVKEIEVSMWGRVSVEEVYDLLHTGAKLKGGFSRFDYTAKG-----ARGASFHELRASLPREAVNVYYRDQIGNVSTSRLR-VTDTRQELEFKPRFPLFGGWKTQWYLGYSVPTYAVMTRQGTT--FKLEMDFSTSLEDAAVDDLTLKVILPEGSTNVQVSVPFAVDEQRRTTRQTYLDTALVG-RPVVVLSKRNVVAAHNAPIQVTFEYAPAFMLHEPLLLVAGFLAFFVVCM 440          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A7R9U8B3_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B3_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.990e-56
Identity = 158/438 (36.07%), Postives = 215/438 (49.09%), Query Frame = 3
Query:  120 SSAAATSNASIARKIDASKNVVQVRTIYNVRGAGSS-YQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGGKATAG---GTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLL--AEQSPREYHTGVTPWRVLQK--TVAYGPYTDLTP------------------------------------------EDT---MAGGFSRVDH-----KAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPL-------LLVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGE-YTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAI 1235
            S+ +A  N  + R +DA+  VV+ R    V   GSS Y +++P      LA +       +A    G +L        A G   T     G+V +    V+T +L P P  I Q + Q++   D+ Y  SPYPT S+T  V L  A +S    +T + P  +  K   + +GPY D+                                            E T   +AGGFSR+D+     KA   GR   S  AFR L A +PG A  IYYRD IGN+STS +       L+ ++ RYPM GGWK  +Y GYNIPS  GLS+    GE Y+L M FGVP+E +  + L +KV+LPEGA D+  DVPF V  +  RR TY+DS  +GGR V+I  K NVV EHN+ F V Y+     ML +  +LVGA L  ++V +
Sbjct:   30 SALSAPVNRDVMRILDATSAVVKQRVDVTVDEVGSSGYDYVVPAPASEHLAFI-------FAKQLKGAELSVTLKRSDATGKTFTIHSPEGSVVLRIRTVFTRMLTPLPASIRQGDDQFVVLEDSHYFLSPYPTTSQTLTVKLDGAGKSEIVDYTQLEPSTLKNKGGAIVFGPYGDVAAMASSPMRVHFLNNAPFATFTDVLREIEVSHWGNIAVEEHFDLEHTGAKIAGGFSRLDYARDFSKAMNAGR---STPAFRSLTARLPGDAWGIYYRDRIGNVSTSMVKHEKGGVLMEVEPRYPMLGGWKINFYHGYNIPSSAGLSL--INGERYSLEMNFGVPYEAVSCDHLEVKVVLPEGAYDIEVDVPFDVRMTNDRRFTYVDSKFMGGRPVIIFEKDNVVKEHNVPFTVTYRVRPMAMLIDVGILVGAYLLIYIVVM 455          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A4D9D0G4_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0G4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 5.250e-56
Identity = 148/371 (39.89%), Postives = 195/371 (52.56%), Query Frame = 3
Query:  312 AGEQLEHFASYDVALG---GKATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTLSETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTD--------LTP-------------------------------ED---------TMAGGFSRVDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLL-------LVLDTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATG---EYTLSMEFGVPFEELWVEDLTIKVILPEGARDVRADVPFTVETS-QTRRHTYLDSPLLGGRLVLIMRKANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAIL 1238
            AG+ L HF + +V  G    K T  GT+           L P P EI  TE Q ++Y D+  +PS YPT  +TT   L   S  E  T   P+    K + +GP TD        L+P                               ED          + GGFSR+D +A    RG  S  A R L+A +P  AR IYYRD IGNISTS +        L L +R+P+ GGWK  +YQGY++P Q+ L+V  ++G    +TL++ F VPF E+WVEDLT+KV+LPE A DVR ++PF+V+   QT R T+LDS L GGR VLI++K NVVAEH     + Y F +  ML EPL LV A  +FFLV ++
Sbjct:   14 AGDGLAHFEA-EVPQGMTEAKLTVFGTL--------AGALVPVPAEIELTENQLVQYLDSHTLPSLYPTARQTTTFALGV-SHIESFTKRDPYSRTGKDLVFGPITDIEGGAAASLSPITIHYQNNAPFVKALQAIREIEVSHWGNVAFEDFVEVQHAGAALKGGFSRLDFQA----RGAPS--AVRGLVAVLPLGARSIYYRDQIGNISTSVIQHGPDGVELNLQSRFPLVGGWKNQFYQGYSVPVQELLTVGPSSGGVRRFTLTVPFSVPFPEVWVEDLTVKVVLPEWAADVRVEIPFSVDDEHQTHRLTFLDSSLSGGRPVLILKKRNVVAEHMQPMVLSYSFPKRAMLLEPLYLVLAFFSFFLVCMI 368          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A835ZF53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF53_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.810e-72
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
Query:    1 MASKSDERRERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPSTQYEDRRS 336
            MASKSDERRERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPSTQYEDRRS
Sbjct:    1 MASKSDERRERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPSTQYEDRRS 112          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A7S1U1W9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.150e-15
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:   19 ERRERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPSTQ 318
            ++RER N +ET ++ A A +  L   +  +  D +  ++   FML   GLEH F ST+ERELFF VHH+VHH A I  ILK  G    E    GRAPSTQ
Sbjct:  164 DKRERGNAIETDLEEARATIRDLEATIGGIPEDGLGERVRVRFMLNGDGLEHDFESTLERELFFVVHHSVHHDATIGTILKEQGLPPPET--FGRAPSTQ 261          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A6G0XI04_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI04_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.880e-9
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 1
Query:   25 RERHNDVETSIDAALAALDGL-TDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPST 315
            RER+ +VE +   A+ A+D L T A  ++D   +   +   FML   G E K  STVERE+ F VHHA+HH A+I +IL     +     Q G APST
Sbjct:   92 RERNTNVEVNRLDAIDAMDKLGTLATTQVDEAHLHKPVDAMFMLSGDGNEVKLQSTVEREMAFAVHHAIHHNALIKVILTTHFPHVPLPPQFGVAPST 189          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A3R6ZNZ1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZNZ1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.680e-8
Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:   25 RERHNDVETSIDAALAALDGL-TDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPSTQY 321
            R+R   +ET+ +AAL  +D + T A    D  S+  ++   F L  +G E    ST+ERE+ F VHHA+HH A+I +I+ +   +       G APST +
Sbjct:   97 RDRLTQIETNREAALVEMDAIQTFASRVADTTSLSKEVQAAFRLSAEGDEVALRSTIEREMAFAVHHAIHHHALIKVIMTSHFPHVPLPPAFGVAPSTVH 196          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A485LUE6_9STRA (Aste57867_25553 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LUE6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.990e-7
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 1
Query:   25 RERHNDVETSIDAALAALDGLTDAVV--KLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPST 315
            RER+  VE +  AA+  +D +  A    ++DA  +   +   FML  +G +    STVERE+ F VHHA+HH A+I +I+     +       G APST
Sbjct:   87 RERNTLVEQNRTAAIDEVDAILAAATASRVDAAQLHQPVHAAFMLSAEGTQVDLASTVEREMAFAVHHAIHHNALIKVIISTHFPHVKLPPTFGVAPST 185          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A812XVY0_9DINO (LolD2 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XVY0_9DINO)

HSP 1 Score: 56.6 bits (135), Expect = 6.110e-7
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 1
Query:   19 ERRERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEI-AQLGRAPST-QYE 324
            + R R   VET   AAL  +  L  A+   DAD +   +T + M    G   +  ST  RE+FF +HHA+HH A++  I      +D E+ A  G APST  YE
Sbjct: 2329 DHRARGVSVETDRQAALTEISQLRSALSGFDADGLNESVTAQVMCAGDGCCAELQSTRGREIFFALHHAIHHNAILKAIAAE---FDIELDAAFGTAPSTLNYE 2429          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A1V9YB28_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB28_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.560e-6
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1
Query:   25 RERHNDVETSIDAALAALDGLTDAVVKLDADSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILK 261
            R R+  VE    AAL  L  + +    +  + +   +   FML  +G E +  STVERE+ F VHHA+HH AMI  IL+
Sbjct:   63 RARNTAVELDRHAALDELAAILNLEASVRNEHLDQPVRAAFMLSAEGHEVELKSTVEREMAFAVHHAIHHNAMIKTILR 141          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A2E9ZLW4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZLW4_9GAMM)

HSP 1 Score: 53.1 bits (126), Expect = 3.620e-6
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 1
Query:   25 RERHNDVETSIDAALAALDGLTDAVVKLDA-DSMKAKITPEFMLEVKGLEHKFNSTVERELFFCVHHAVHHMAMIALILKNIGGYDDEIAQLGRAPST 315
            R+R   VE  +D A  ALD L   +  + A D ++  IT    +  +G      STV REL   V H++HH+A+IALI+K+ G   D  +  G+A ST
Sbjct:   81 RKRDKSVENKMDVATIALDSLGRRIETMAALDHLETPITVRESVHYRGPAVTMRSTVGRELMGLVTHSIHHLAIIALIVKSYGYEMD--SDFGKAAST 176          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A6U3Y5M0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Y5M0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.170e-6
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 1
Query:  184 STVERELFFCVHHAVHHMAMIALI-LKNIGGYDDEIAQ-LGRAPSTQYEDRR 333
            STVEREL FC HHA+HH+AM+ +I L+ +G  + E+ +  GRAPST   D++
Sbjct:  147 STVERELGFCAHHAIHHLAMVRIICLQTVGLNEAELPEGFGRAPSTILFDKK 198          
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Match: A0A7S4T454_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T454_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.400e-5
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 1
Query:  184 STVERELFFCVHHAVHHMAMIALILKNIGGYD-DEIA-QLGRAPSTQYEDR 330
            ST+ REL FC HHA+HHMAM+ +I  N  G   DE+    G+APST   DR
Sbjct:  163 STIGRELGFCAHHAIHHMAMVKIIALNFAGLSVDELPPDFGKAPSTIIYDR 213          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352125 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNP5_9STRA8.770e-290100.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D7FKM8_ECTSI4.220e-6938.89Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7S3Y5N0_HETAK9.010e-6737.35Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K3W6J7_GLOUD1.650e-6034.46Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A8K1FFD1_PYTOL4.450e-6034.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3LZI6_9STRA1.310e-5834.82Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
W7TIB7_9STRA1.050e-5737.07Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A2D4BXN7_PYTIN1.380e-5734.30Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A7R9U8B3_9STRA2.990e-5636.07Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A4D9D0G4_9STRA5.250e-5639.89Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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BLAST of jgi.p|Trimin1|352125 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A835ZF53_9STRA2.810e-72100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1U1W9_9STRA1.150e-1546.00Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A6G0XI04_9STRA5.880e-941.84Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3R6ZNZ1_9STRA4.680e-836.00Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A485LUE6_9STRA2.990e-736.36Aste57867_25553 protein n=1 Tax=Aphanomyces stella... [more]
A0A812XVY0_9DINO6.110e-737.50LolD2 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A1V9YB28_9STRA1.560e-639.24Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2E9ZLW4_9GAMM3.620e-637.76Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A6U3Y5M0_9STRA6.170e-651.92Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4T454_9STRA1.400e-552.94Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_109contigContig_109:485943..493593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352125|estExt_Genemark1.C_Ctg_1090058
BRITEko00000,ko00001,ko00002
KEGG ModuleM00072
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG koko:K12666
GOsGO:0003674,GO:0003824,GO:0004576,GO:0004579,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009505,GO:0009987,GO:0012505,GO:0015833,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0030312,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042470,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048770,GO:0051179,GO:0051234,GO:0070085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
Preferred nameRPN1
Descriptiondolichyl-diphosphooligosaccharide-protein glycotransferase activity
COG categoryM
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2291@1|root,KOG2291@2759|Eukaryota
Evalue4.2e-70
Seed ortholog2880.D7FKM8
Hectar predicted targeting categorysignal peptide
TranscriptId352447
TrackFilteredModels1
ProteinId352125
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352125gene_13024Tribonema minus UTEX_B_3156 geneContig_109 485943..493593 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352125Trimin1|352125|estExt_Genemark1.C_Ctg_1090058Tribonema minus UTEX_B_3156 polypeptideContig_109 486005..493531 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13024_9exon_13024_9Tribonema minus UTEX_B_3156 exonContig_109 485943..486025 -
exon_13024_8exon_13024_8Tribonema minus UTEX_B_3156 exonContig_109 487075..487167 -
exon_13024_7exon_13024_7Tribonema minus UTEX_B_3156 exonContig_109 487801..487968 -
exon_13024_6exon_13024_6Tribonema minus UTEX_B_3156 exonContig_109 488654..488841 -
exon_13024_5exon_13024_5Tribonema minus UTEX_B_3156 exonContig_109 489572..489716 -
exon_13024_4exon_13024_4Tribonema minus UTEX_B_3156 exonContig_109 491284..491463 -
exon_13024_3exon_13024_3Tribonema minus UTEX_B_3156 exonContig_109 491901..492068 -
exon_13024_2exon_13024_2Tribonema minus UTEX_B_3156 exonContig_109 492463..492635 -
exon_13024_1exon_13024_1Tribonema minus UTEX_B_3156 exonContig_109 493468..493593 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13024UTR3_13024Tribonema minus UTEX_B_3156 three_prime_UTRContig_109 485943..486004 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13024CDS_13024Tribonema minus UTEX_B_3156 CDSContig_109 493468..493531 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_13024UTR5_13024Tribonema minus UTEX_B_3156 five_prime_UTRContig_109 493532..493593 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13024 ID=mRNA_13024|Name=jgi.p|Trimin1|352125|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1324bp|location=Sequence derived from alignment at Contig_109:485943..493593- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GAGAGTGTGAGTGGTGGTCTGCCATCATAAGTTTTCGAGCTCGCGGAGCA
TCAGGCGGCACCATGGAGCTGCGAGGCGTGTGGATGCTGCTAGCCCTGGT
GGCTGGAACCTGGGCGACATCATCTGCTGCAGCCACATCAAATGCCAGCA
TCGCGCGCAAGATTGATGCTTCCAAGAATGTCGTGCAAGTGAGGACCATA
TACAACGTGAGGGGTGCAGGCAGCAGCTACCAGTTTCTCATTCCAGAGCA
GCTGCATGCGCGGTTGGCGCACATGGAGGTGCTGGTGAACGGCAACTATG
CTGCCTTCAGGGCCGGAGAGCAGCTGGAACACTTTGCATCGTATGACGTG
GCGTTGGGGGGTAAGGCAACGGCGGGTGGCACTGTCAAGGTGGAGACTGT
GGCGGTGTACACGGATGTGCTGGAGCCACACCCCAAGGAGATACTGCAGA
CAGAGAAGCAGTACATGCGGTACACGGACACTGCGTACGTGCCAAGCCCC
TACCCCACCCTGTCAGAGACGACCGACGTGTTACTGGCAGAGCAGTCCCC
ACGCGAGTACCACACGGGAGTCACGCCGTGGCGCGTTCTCCAGAAGACTG
TTGCCTATGGGCCCTACACAGACCTCACACCAGAGGACACTATGGCTGGG
GGATTCTCACGAGTTGACCACAAGGCTCAGATGCTGGGGCGGGGTGTGAG
CAGCGGTGCGGCGTTCAGAAGGCTCATTGCCGAGATACCCGGCAGCGCGC
GTGACATCTACTACCGCGACAACATTGGGAACATCTCAACCAGCCCGCTG
CTGTTGGTGCTGGACACTAGATACCCTATGTATGGCGGCTGGAAAACAGC
CTGGTACCAGGGGTACAACATACCCAGTCAAGATGGCCTCAGCGTGAACT
CTGCAACAGGGGAGTACACGCTGTCCATGGAGTTTGGCGTGCCGTTTGAG
GAGCTGTGGGTAGAGGATCTCACCATCAAGGTGATACTTCCCGAGGGGGC
CAGAGACGTGAGAGCGGACGTGCCATTTACAGTGGAAACTTCACAAACAA
GGCGACACACCTATCTGGACAGTCCGCTGCTGGGGGGGCGGCTCGTTCTG
ATTATGCGGAAGGCCAACGTCGTCGCTGAGCACAACATCAAGTTCAAGGT
TCACTACAAGTTCTGGCGACCTCTGATGCTCCACGAGCCGCTGCTGCTGG
TAGGGGCGTGTTTGGCCTTCTTCCTTGTGGCCATACTGGCGCCCTGGGGT
TGCTCCAACTAAGGTCCTCCTCTTTGGCACACCGCAAGACTCTTGCGGCA
AGAGGTGAGGGGGTAGCTTCGCGC
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protein sequence of jgi.p|Trimin1|352125

>Trimin1|352125|estExt_Genemark1.C_Ctg_1090058 ID=Trimin1|352125|estExt_Genemark1.C_Ctg_1090058|Name=jgi.p|Trimin1|352125|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=400bp
MELRGVWMLLALVAGTWATSSAAATSNASIARKIDASKNVVQVRTIYNVR
GAGSSYQFLIPEQLHARLAHMEVLVNGNYAAFRAGEQLEHFASYDVALGG
KATAGGTVKVETVAVYTDVLEPHPKEILQTEKQYMRYTDTAYVPSPYPTL
SETTDVLLAEQSPREYHTGVTPWRVLQKTVAYGPYTDLTPEDTMAGGFSR
VDHKAQMLGRGVSSGAAFRRLIAEIPGSARDIYYRDNIGNISTSPLLLVL
DTRYPMYGGWKTAWYQGYNIPSQDGLSVNSATGEYTLSMEFGVPFEELWV
EDLTIKVILPEGARDVRADVPFTVETSQTRRHTYLDSPLLGGRLVLIMRK
ANVVAEHNIKFKVHYKFWRPLMLHEPLLLVGACLAFFLVAILAPWGCSN*
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mRNA from alignment at Contig_109:485943..493593-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13024 ID=mRNA_13024|Name=jgi.p|Trimin1|352125|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7651bp|location=Sequence derived from alignment at Contig_109:485943..493593- (Tribonema minus UTEX_B_3156 )
GAGAGTGTGAGTGGTGGTCTGCCATCATAAGTTTTCGAGCTCGCGGAGCA TCAGGCGGCACCATGGAGCTGCGAGGCGTGTGGATGCTGCTAGCCCTGGT GGCTGGAACCTGGGCGACATCATCTGGTAAGCCAGCACTAGATGCATCAG GGTACACGTCACACAAAACAGCCTGCAGTTTAACGACTAGTGCTGTCGAG CCTCACAAGCTGCTCTCTGTTCGAGCTCTGAAGCACCTTCAGAGCTCAAT TCGGCAAGTAATTGAAGTTGACAGAAAAAGCCCTCGGCTCTCTTCAAAAC CCATAGCAGCAGCCTGTGAAAGCCTCAGACTGCGCTAGTGGATCTGCCCA TGGCCTGCGAGCAACGCTTCAGCTCATCCTTGTGCGTTCTAATGTGAAGT TCATTGCTGATGGTGTTTGAGAGCCAGATGTAGTACGAGATGTGATCTTA CAGGGCCTGGTTGGGTTTCCGCTTTGCAATGACCAGCTTGAGTTCTGTGC CGGCAGTGTGCAACATCGCCCCTGCTTTTTGTGAGGAGTAAGCAGTACCT CGCCGCATGAGCATCCACCAGCAGAGTAGATAGTGCTGACAGCGCATACT GACATCGCAAAACCTAAGTCGTTTCACAGCGCACTCATGGTTGGCAACCG CATCAGAACGCCAGCCCCCAACATCAATGATCCGGTGCTTGGTTTTTGAT AAAATGGTTGAGTATGCACTTCTTGCCTCCATGACACCGCAGCAGCGCCA ATGCCTCGCACCAGCGCATGAGACTAGCATCAGAGTATTTCACCAGGGCC ATGTACTAAGGAAATAGTGCGCTGTCCACCATTGACCTTCGCCCTCATGC ACCCCGCTTATCTCATTATCAGCTCAAAACAGTGAGTGCCCATCGTTGCA TCATGTGTTGGCTCATCTTGATCAACCCTCTCTTTCGTTCACCTATGTCT GGGTGCAGCTGCAGCCACATCAAATGCCAGCATCGCGCGCAAGATTGATG CTTCCAAGAATGTCGTGCAAGTGAGGACCATATACAACGTGAGGGGTGCA GGCAGCAGCTACCAGTTTCTCATTCCAGAGCAGCTGCATGCGCGGTTGGC GCACATGGAGGTGCTGGTGAACGGCAACTATGTGAGTGCCAGGAGCAGTG ACTGATCAATAGTGCATACATATGCATGTATCTATGATGTTCAGGGTCAT CACCCCTGTGGTCGCGTTGCGTGCCTTACGCTTACTCTGATTTGTGCACA TCTGATTGTGTGCATTGCACCCATGGCGCGACTGCGCATATGTGTATATA CGTGCCGTCGCTCAGCAACATGACACACTGAGTGTGCTGATAACGTCACG TTCTGAGTTATGAACTGGTGTGCTTGTCACATGTGCACCTGATGCTGCAA AATGTTGTCAAATGATACCTCCGCCTTTGTCGTGTTCTTCTGTTCTTGCC ATTTGTGGTATGTAGCATGTGCCAATCACCATTGGCCCTGCGTGCATTGC TGTCCTTGCTGTCCTTGTTGCTCAGGCTGCCTTCAGGGCCGGAGAGCAGC TGGAACACTTTGCATCGTATGACGTGGCGTTGGGGGGTAAGGCAACGGCG GGTGGCACTGTCAAGGTGGAGACTGTGGCGGTGTACACGGATGTGCTGGA GCCACACCCCAAGGAGATACTGCAGACAGAGAAGCAGTACATGGTAAGTG CTGCTGTGCATTGAGGGAGCGCTGCAGATCACGCGCATGATGGCACACAT TGGTATTTTGCGTTGGTTTGATTCAAGTTTAGCTAGTGACAGTGCTCAGC AGCTGTCCCAACTCCAAGGCTGCTGTACGGTGCGCCCATGGTCGCTGCAA GGTGTTGTGGTGGCAGGTTGCTCGTATCTGCAAAGTTGAAGTTTTGCATG TTGAAGTTCACACAAACGTGACTTGCCGTACCACACTTTATACCTCGTCA TTCCCTGGTTCATCATGTATGCTTTGCGGCACTTTCATGTATGTGTTATG TATGCATTGGTCTACCTGTTTGTGTTTGTGCATGGACACATCGTGTATAG CTTGTGGAACAGCAAGGCAAACAAACACGACATATCTGCAACTGACACTC ACTTTCTGAACTGATTCGCGCGCTACGCAGCGGTACACGGACACTGCGTA CGTGCCAAGCCCCTACCCCACCCTGTCAGAGACGACCGACGTGTTACTGG CAGAGCAGTCCCCACGCGAGTACCACACGGGAGTCACGCCGTGGCGCGTT CTCCAGAAGACTGTTGCCTATGGGCCCTACACAGACCTCACACCAGAGGA CACTATGGCTGTGGATGCACCCGAACTGTCTGTTCACTACGTTAACCATG CTGGTGAGCGAGTGTTCCTTGTTGTTGAGGGCGATTGTTCACACAATTTA TTGCATTGGCCAAAAGCCAGAGAGTGTCCCAAGTGTACAAGTGGTGTACA TGGCTTTTTGTGTGAATTCTGGTCATGGCCATCCCGATCCATCATTCATT TTTTGAAAAACATGATAGGGGATGATGCAACGCATTCAACATCAACCCTT AGGTTGAACATACCCAACTCCTAGCCCTCATCTGTTAGGGTCCTAGCCCT TATCTGTTAGGGTTAGGGTTGGGGTTAGGCAAGGTTTGTACTCTGCGTCC AGCGTGCTGGGCCACTGCTGTGTCTTAGGGTTAGATGACACACCATTTGG ATGTCACATGCTGAATCCCCTCCTGCGCCGGACTCTTGCATGTTTTCAAC AGGCTTGCTTTTTAACCCTAACCCTAAACCTTAAAGATTTGCTCACCGCA GACAGTCCAGACCGCTGCTGAGGGCAGTTGTGCCTGCTTACGGCGCTGCA ACAGTTGTGTTGGTCAGTGACTATATCATGCGCTGTACATCAAAGTCCCG ACGAAGTTCACCTGAGCTCTGCGCATGGTGCACACGCTTGAAGTTCATCC TCAAGTCTGCCAAATCATGACCCACTTGCATGCAGCATTCTTGCAGGTGT CTGCGGCAAGGTGAATGACCCTTGACCTCCTTGTCGTCCACAAATATCAT GTCTTGACTGAATTGCGTGCACGATGCATGCCAGGCCCAGCCGCAGGAAT CGGCATTCAACGCCGCAAAACGTGGGAAACACCAACATAGAACCATCTTG CTAGCATCTCATCAAGGTGAACGTCTGCTGCCTGTGTTTGTTGCAATGAG TGCAGCTTTTGCAAAGGCCTCTACATGCCTGCGCGAAATTGAGGTATCGC ATTGGGGCAACATTGCGGTGGAGGAGCTGTATGAAGTTGAACACCACGGG GCAAAACTGAAGGTATGTATTCACAGCTGCATACCCATACCTACTGTTCC AATGTGTGTGCACCTGACAACAAGTGCCGTGCGTTGCGTGCGCCAGTTGA TGTAAAACCATACCTGAAGTATACTTTGAGTTGTGTATGTCTAGTCTACT GCAGTCTCTTAGGGCTTAGGGTTGGGTGTGAGCACATGTGTACCCACAAC ATTCTTTAACCTTGTAGAAGCATGGGCCCACAGATGGCTACTACTGTAGT GTGCGTTGCCACTGTTGCACTTCATGTACATCAAGGGGCGTAAGCCCAAA GCGCCTTGGCCGTGCCTCAAGTGCAAAGGGCACACTATGAAGTTCATCTA CACTTTGAAGTGCACCATATGCTTTGACAGGCTACCTAACTGCAGTCGCT ACTCATTATGGACCTTGTTCTCAACAGATCGTGCCGTCTTGCTCTGCTCT GTGTTGTCCAGCTCTTGCCATGGCCTCACCATGAAATTCAGGTAGTTTAA GGTGTATAGAAGTATTCACAATATTGCCGCTCTTCATGCTCCATGGTATG ACTTCAACGCATGGCTTACATGCGCAGGGGGGATTCTCACGAGTTGACCA CAAGGCTCAGATGCTGGGGCGGGGTGTGAGCAGCGGTGCGGCGTTCAGAA GGCTCATTGCCGAGATACCCGGCAGCGCGCGTGACATCTACTACCGCGAC AACATTGGGAACATCTCAACCAGTGGCATCTTCAATACGGACCGCAAAGG CAAGCTACCCCCCCTCCCTCCCCCGCACATACACAAGAATTATGATGGAT CACATTACATAGAATTCAGACGCTGTGAAGGTAAACCTGGTACCAATCAG ACAAAGTTCACATGGACGGTTCATCGACAACGCAGTGGACGCAGCTTGCA GTGGTGGGTTTAGTGTTTAGGCTCAGCTGATGTCAAGTTGACATTAATGA CACATGCAACTCCAGGCAGCATAAGGATAGATAAATGACGCAGTGTTCAT GCTGCGATCAAATTACAGAAGGTGCAGTGAACGAAACAGACAGACAATCG TCTTTTTTGCTACATAGGGACACAAGCGCTTGCTTCTAATACTCACATTA CCTGCAGTATGTGGCACTATCCTGTTTTGAGTTTACTAAGTAGACAACAG GTGGCGCACCACCACGTGTATCTACTTTGAGGTTTGTGTAGTTCATGTAC CGACGGGCACTGCGTGCCACTATGTGGTTGACTTGACACGCTGACTTGAC TCGTCTGGCACCATGGAAGTCCAGGGCAATTCAGTGGGTCCTCTCATGGC CTCTCTTGTTATGGAGGATGAATACGAGCAGTTAGAAACTACGTTCGGCT ATGTAACATTCAATAGGTATTGGCCCGCTGCGTGCCTTGCTGTGTTTGAT GTTACGCCTGTGTTAAACATCAGCTGCCTGCTATCGTTCGCTGTGACAAC AGGCCCGCTGCTGTTGGTGCTGGACACTAGATACCCTATGTATGGCGGCT GGAAAACAGCCTGGTACCAGGGGTACAACATACCCAGTCAAGATGGCCTC AGCGTGAACTCTGCAACAGGGGAGTACACGCTGTCCATGGAGTTTGGCGT GCCGTTTGAGGAGCTGTGGGTAGAGGATCTCACCATCAAGGTATGTATGT TCACTTGAAGTAGCACTTGACAGCACAGCAGTAAACTTCAAGGTGCACAG TGTCAGCTTCTGTTGAGGCCCTGTGTGTGCGTGCGCGCAAACTAAACAAA ACGCCCGGCATGCAGCGTGCTGCTGGCTTGCGCGCAGAGCAACATCGCGG CCAGCGGCAGACGCGTAGGGCGACACAATCACGCATCTTGTGTCATGGAG CAGTTGACAGCAGTCAGGATGTTTCCTTCTCAGAGTGCTGTCGCACACCC GACACCTTCGCAAGCAACACGATGCAGAGGGAGAGTGATTGATCCGCTGA CACAACCATGGTGACGTCTGCATTAATGTATGCAGATCTACAATGTCGCT GTTGTCACATTGTCATGCCTGCTGTAGGAGAGCCACAAGTGCTTCACGTG TCGTGAACTACCAGTACAGTACAGATGCAGTACAGATGCAGTACAGACGT GGGCAGGGCCAGCAACTGCATCTCAACAAGTGCTGCATGGACTATATGTA CTTATTGGCGAAGGGTTTCTACATGGCACCAGCCACCTAGCGTTTTACTC TCGAGGCCGTGTGCAAGGTCAAAGCACCAGCCTTGTAACTTCAACTTCAA GCTGCAATGTGAGGTATCGCACAGAATGCCATTGACTGAACCGTGCACCC GCATCGGGTGTCGGTCGTGTGCCAGGTGATACTTCCCGAGGGGGCCAGAG ACGTGAGAGCGGACGTGCCATTTACAGTGGAAACTTCACAAACAAGGCGA CACACCTATCTGGACAGTCCGCTGCTGGGGGGGCGGCTCGTTCTGATTAT GCGGAAGGCCAACGTCGTCGCTGAGCACAACATCAAGTTCAAGGTGAAGT ATAAAATTGAATGCAATGTGCGATGGCAGGAATAACTTTCTGTCGAGGCA CTGGTGGCAGCCGTGGTGTGAATGTACTAAGGAGATTCAGAAAGAGGTCA GGTAAAACGCGAGCAGAGATGACTGCACATGTGGCGCGCTTAGTGTTGGA GTTGGAACATGAGCTTACTGTGCAGTTCTGAGTGTGAGTTTTGCAGTTCT GAATGAAGGTGAAGTTGCGAACACCACGCAAGATCGAAAGGGTTGAATCT CGGGCAAACACTTGCGCGGCTGCGTGTGTGCAGTACCAAATTCAACTTGA AGCAAGTGACCAGCAAACGCACATGAAAGGTGCACCAAAGCAAGCGGAGT GTGCCAATTGCTTTTGCGTCTTGCATAGACGATATGCTTGCATCTCTCTT CAGTTGTCACCTTCTGATCCTGGTGACCATAACTTGCCTGAGGGAGAACG GGTAGGAATTATTGCATTGTGCCACCTACTGTGTTGGTGCAACAGCTTTG CGCATGTACATTGTGCATGCAGTCCACATGGCACCTGTCATGCTTTCTAT GCTGTTGACCTCTAGCATGCAGTCATTTCTTAAACGCTTCGCATTCGCCT GCAACTGTTGCCGGTCACTTGAGCAGGTTCACTACAAGTTCTGGCGACCT CTGATGCTCCACGAGCCGCTGCTGCTGGTAGGGGCGTGTTTGGCCTTCTT CCTTGTGGCCATACTGGCGGTGCGCATACACGATGCAAATGCTAACTCAA AAGGAGGCAGCAGTGCACAGCCCAGTGCAGACACCTGAGTGCCACAAACA ACACACAACGAATGACTCCCTGTCTATTTTCCTGAATCCATTCCTGAAAC GTGAGTCGCGTCTGGCCTATCTGCTCATGCTCACCATCGCATTGCATCCA TTTGACTGTCTTTCTTGTTTTTGTGTATCGGCAGCAAACTGTACTGCGAC AATGCTGAACGGCGAACCATTGGTGATGCTGCACCGTAACACAATGAATG GCACAGCGCCATGTCACTCTCTATTAAATTGCGCGCATGCAGGACTGCAG TATGTAATGCAAAACATTGTAGAAGCAGGCGGCGATGACATGATGGACCA GCCCCCAACCTTCAACTTCAAGGAGCATACATACCCAAGGAGCATACATA CCCAAGGAGCATACAGCCGCCATGGCAATTGAGTCATGCTAAACACTAGA TGCTCGTCGTATGCACACACACCACAGCACAGGGCTTCATGACCAGAGCA CGCCAGACAACACACAAAAAGGAAGAAGAAATGGGTCTGAACGCGTCATT GATTGGGAAACGTGGGCACAGCGGCACTGTGCGAGTATGGGGGGTGATGT TGAAACGCTGTGCAACCGTGGGGGAATTAAAAGTTGGTTTGGACATGAAG GGAGGCGCTGCGCTATTACAGCACCCTCCTCCTGAGCAGAAGCCCCTACA GTTACCATTCATGGCACGACAGGCACGGCCAGGGTTTAAATCTGACCGCC ACCCGCACCAAAGGAAAGGGTAAAAAACAAGCACGGCATTGGCCGTCCAC AGCAGTGCTCAAAAGCTACCGACTGCAGGACACCACCATTTATCCCAAAA ACAGCCCCCCTTCACCAAACCCCCAGACATCCATTTCCCCCCTCCAGGGG CACAGCGCATGCGTCTTCTTCGAAGCTCGCGAATTTAGATCCGCTGTGAA TCGCTCCCTCGGATCTCGTGCTGCGGCACAGCACTGAAGTCACCTTCACA CCGCACAGCGGCGCGCAGCCCTGGGGTTGCTCCAACTAAGGTCCTCCTCT TTGGCACACCGCAAGACTCTTGCGGCAAGAGGTGAGGGGGTAGCTTCGCG C
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Coding sequence (CDS) from alignment at Contig_109:485943..493593-

>mRNA_13024 ID=mRNA_13024|Name=jgi.p|Trimin1|352125|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1200bp|location=Sequence derived from alignment at Contig_109:485943..493593- (Tribonema minus UTEX_B_3156 )
ATGGAGCTGCGAGGCGTGTGGATGCTGCTAGCCCTGGTGGCTGGAACCTG
GGCGACATCATCTGCTGCAGCCACATCAAATGCCAGCATCGCGCGCAAGA
TTGATGCTTCCAAGAATGTCGTGCAAGTGAGGACCATATACAACGTGAGG
GGTGCAGGCAGCAGCTACCAGTTTCTCATTCCAGAGCAGCTGCATGCGCG
GTTGGCGCACATGGAGGTGCTGGTGAACGGCAACTATGCTGCCTTCAGGG
CCGGAGAGCAGCTGGAACACTTTGCATCGTATGACGTGGCGTTGGGGGGT
AAGGCAACGGCGGGTGGCACTGTCAAGGTGGAGACTGTGGCGGTGTACAC
GGATGTGCTGGAGCCACACCCCAAGGAGATACTGCAGACAGAGAAGCAGT
ACATGCGGTACACGGACACTGCGTACGTGCCAAGCCCCTACCCCACCCTG
TCAGAGACGACCGACGTGTTACTGGCAGAGCAGTCCCCACGCGAGTACCA
CACGGGAGTCACGCCGTGGCGCGTTCTCCAGAAGACTGTTGCCTATGGGC
CCTACACAGACCTCACACCAGAGGACACTATGGCTGGGGGATTCTCACGA
GTTGACCACAAGGCTCAGATGCTGGGGCGGGGTGTGAGCAGCGGTGCGGC
GTTCAGAAGGCTCATTGCCGAGATACCCGGCAGCGCGCGTGACATCTACT
ACCGCGACAACATTGGGAACATCTCAACCAGCCCGCTGCTGTTGGTGCTG
GACACTAGATACCCTATGTATGGCGGCTGGAAAACAGCCTGGTACCAGGG
GTACAACATACCCAGTCAAGATGGCCTCAGCGTGAACTCTGCAACAGGGG
AGTACACGCTGTCCATGGAGTTTGGCGTGCCGTTTGAGGAGCTGTGGGTA
GAGGATCTCACCATCAAGGTGATACTTCCCGAGGGGGCCAGAGACGTGAG
AGCGGACGTGCCATTTACAGTGGAAACTTCACAAACAAGGCGACACACCT
ATCTGGACAGTCCGCTGCTGGGGGGGCGGCTCGTTCTGATTATGCGGAAG
GCCAACGTCGTCGCTGAGCACAACATCAAGTTCAAGGTTCACTACAAGTT
CTGGCGACCTCTGATGCTCCACGAGCCGCTGCTGCTGGTAGGGGCGTGTT
TGGCCTTCTTCCTTGTGGCCATACTGGCGCCCTGGGGTTGCTCCAACTAA
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