mRNA_12943 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A835YLV8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV8_9STRA) HSP 1 Score: 1102 bits (2851), Expect = 0.000e+0 Identity = 790/791 (99.87%), Postives = 790/791 (99.87%), Query Frame = 1
Query: 1 MQFWKWFSTSVVLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGFEDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPAAATRAAAAAAPVDVPQPAAFRAGGRRLGGGEGVLPEAAAAAPNAVAMQGGLLLEDVLAEAERVVREGEEQGGWLLGEEQEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARTQPSMQLPQPQLPLQRRVFPDSSAQAEERTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPTAPAEGWQPWPMVVAADAVQVHQEPTIGSPVTTMLLKGTALFIFMRTXXXXXTRNSRPPLTNPDPWLATRDGWILRSTPPEPPSVQPLDVPIPAALLPLARTPRNSSRPEHSDRLQTVVLGPSAAADHRLTLTTQGRLSAAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMARGDXXXXXXXXXXXXXXXXXXXXXXXPSERNAEDGTQ 2373
MQFWKWFSTSVVLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGFEDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPAAATRAAAAAAPVDVPQPAAFRAGGRRLGGGEGVLPEAAAAAPNAVAMQGGLLLEDVLAEAERVVREGEEQGGWLLGEEQEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARTQPSMQLPQPQLPLQRRVFPDSSAQAEERTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPTAPAEGWQPWPMVVAADAVQVHQEPTIGSPVTTMLLKGTALFIFMRTXXXXXTRNSRPPLTNPDPWLATRDGWILRSTPPEPPSVQPLDVPIPAALLPLARTPRNSSRPEHSDRLQTVVLGPSAAADHRLTLTTQGRLSAAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMARGDXXXXXXXXXXXXXXXXXXXXXX PSERNAEDGTQ
Sbjct: 1 MQFWKWFSTSVVLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGFEDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPAAATRAAAAAAPVDVPQPAAFRAGGRRLGGGEGVLPEAAAAAPNAVAMQGGLLLEDVLAEAERVVREGEEQGGWLLGEEQEGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARTQPSMQLPQPQLPLQRRVFPDSSAQAEERTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPTAPAEGWQPWPMVVAADAVQVHQEPTIGSPVTTMLLKGTALFIFMRTXXXXXTRNSRPPLTNPDPWLATRDGWILRSTPPEPPSVQPLDVPIPAALLPLARTPRNSSRPEHSDRLQTVVLGPSAAADHRLTLTTQGRLSAAAAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMARGDXXXXXXXXXXXXXXXXXXXXXXAPSERNAEDGTQ 791
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA) HSP 1 Score: 281 bits (718), Expect = 3.380e-78 Identity = 177/378 (46.83%), Postives = 228/378 (60.32%), Query Frame = 1
Query: 1 MQFWKWFSTSVVLTLGTVE-------QFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGG-----FEDHMDADKNIFHFKFRMVHWDHMDSG---KKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAP 1089
M F + + S+ LT TV QFY V++L T+K +++VLGNM L L V R LK +F G+LRD+EVE L +N R+A+TETCLALTIFREEL+ RVL LF+ LLF K+FHWL Q+RVE++E +DN + T+ RL L L+V DV + C+ + PSVLILF FE+ IL V+ TL +Y LHLVD R IEG W K SY FFLE A+ E++RF Y++FF I+FT+YGMPLHIVRDLW+SY L+RRL +N+YR + F D +++ I ++ D M++G KKL C IFH CLRLWLQQQQSCPTCRADIP +P
Sbjct: 4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGCVYFW---KGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMR-IEGNWPQKGSYLFFLEFAT------------------EVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPD-ATSEELIGCEHTCIICRDLMEAGPGAKKLPCSHIFHLD------------------CLRLWLQQQQSCPTCRADIPTNSP 339
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A7S2SCZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCZ9_9STRA) HSP 1 Score: 274 bits (700), Expect = 6.900e-77 Identity = 167/371 (45.01%), Postives = 224/371 (60.38%), Query Frame = 1
Query: 55 EQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQV---------GGFEDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPAAATRAAAAAAPVDVPQ 1140
+QFY TVVFL T+K ++VVL N +L L + R K +FLG+LRD E E + +N R+AI ETC+ALTIF EEL+ RV LF++LLF K FHWL+ RVEH+EQ D + T++RL L VL+ +D +++ C + + + PSVLILF FE+AIL + + TL +Y LHL+D + +EGTW+AKASY FFLE + E LRF +++FF IVFT+YGMP +I+R+L+ SY+ LR+RL + YR++ ED ++A ++ ++ DHM GKKL CG IFH CLRLWLQQQQ+CPTCRA IP P TRA A P VPQ
Sbjct: 48 QQFYPTVVFLVTSKFSIVVLVNFALVLTLILGRITKSIFLGRLRDAEREIVYDNVRYAIPETCVALTIFHEELNIRVFGLFTILLFSKVFHWLSHCRVEHVEQADALSRLTHVRLVALIFVLLFSDAFVLGVCTYLCVQN-GPSVLILFGFEYAILSITVLATLVRYVLHLIDLQ-VEGTWNAKASYVFFLEFLT------------------EALRFMLFMVFFMIVFTYYGMPFNIIRELYGSYNNLRQRLTQFRNYRKLVVNLNERFPDATEDELEACEHTC-----IICRDHMAEGKKLPCGHIFHVD------------------CLRLWLQQQQTCPTCRAPIPVDPP---TRARPARVPPAVPQ 372
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A8J2SMG0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMG0_9STRA) HSP 1 Score: 269 bits (687), Expect = 9.140e-76 Identity = 159/353 (45.04%), Postives = 203/353 (57.51%), Query Frame = 1
Query: 46 GTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGFEDHMDADKNIFHFK----FRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPA 1092
T EQFY TVV+L T+KL ++ LGN + L R+ K VFLG LR+ EVE L+EN R+A+TETCLALT+FREEL+TRV LF+ LLF K FHWLA ARVEH+E + + RL L L V D+ + C +M + PSVL+LF FEFAIL KY L+ ++ R +GTW KA Y FF++ + E+LRF Y++FF IVF +YG+PLHIVR+LW SY LR+RLQA+ +YR + D + ++ D M G++L CG +FHF CLRLWLQQQQSCPTCR DIP APA
Sbjct: 23 ATREQFYPTVVYLVTSKLCVLALGNQVIVLTLLAGRSAKAVFLGSLREAEVELLHENARYAVTETCLALTVFREELTTRVFALFTALLFAKVFHWLAHARVEHVEHAPQTSTLQHWRLAALMFWLGVVDLVALGGCAAMCL-KHGPSVLLLFGFEFAILGAGLGADACKYLLYAIEQRRYDGTWPPKAQYAFFVDFIA------------------EVLRFAAYVVFFSIVFAYYGVPLHIVRELWASYVQLRQRLQAFKKYRALTANMDERFPPATEEEIREAGGICIICRDDMSEGRRLPCGHVFHFA------------------CLRLWLQQQQSCPTCRQDIPVEAPA 338
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI) HSP 1 Score: 265 bits (678), Expect = 2.040e-74 Identity = 163/369 (44.17%), Postives = 224/369 (60.70%), Query Frame = 1
Query: 22 STSVVLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMP-LHIVRDLWVSYSTLRRRLQAYNRYRQVGGFEDHMDAD---KNIFHFKFR-MVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPARAPAAATRAAA 1113
+T+V+ T ++Y TVVFLTTNKLA LGN ++ + + R + ++FLG LRDIE+E + EN R+A TETCLALT+FR +L+ + LF LL KAFHWL++ARVEH EQ +LS+ RL L + +V D ++ C+ DQ S L+LFAFE+AIL +AA T LH+VD R+ EG WHAKA++ LE S E+ +F FY+IFFG++F+ YG+P L+++RD+++S+ L+RRLQA+ RYRQ+ D D + + + ++ D MD+GKKL CG IFHFQ CLR+WLQQQQ+CPTCRA+IPA AA AAA
Sbjct: 15 TTAVIHAWQTRVEYYPTVVFLTTNKLAQAALGNWAIVMAIGMGRLVSMLFLGPLRDIEIEVMYENARYAFTETCLALTVFRGDLTAVTIALFIQLLLVKAFHWLSRARVEHFEQAGQQSLSSMARLCSLVFITLVVDGLMVTYCLENIPVDQVSS-LVLFAFEYAILSIAAFSTAVHLLLHVVDNRM-EGAWHAKATWVMLLEFFS------------------EVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFDRLQRRLQAFYRYRQLANTMDERFPDATEEELAECEHTCIICRDTMDAGKKLPCGHIFHFQ------------------CLRMWLQQQQACPTCRANIPAHVTVAAATAAA 345
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: G4ZY03_PHYSP (RING-type domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZY03_PHYSP) HSP 1 Score: 254 bits (649), Expect = 4.910e-73 Identity = 154/375 (41.07%), Postives = 217/375 (57.87%), Query Frame = 1
Query: 1 MQFWKWFSTSVVLTLGTV-------EQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGF----------EDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADI 1074
M+FW + S S+ G + +QFY +V++L T+K++++VLGN L R LK FLG LRD EVE L+EN R+A+TETCLALTIFREE+S V+VLF+ L+F K FHWL+QAR+E IEQTD + T++RL L +L D + C ++++ + PSV ILF FEF IL V V T +Y L++VD+R+ +G W K +Y F+LEL S E+ + YL+FF ++FT+YGMPLHIVRDLW+S L+RR+ +Y RYR++ E+ + D+ + M D+ KKL C IFH CL++W+Q+QQ+CPTCR+ I
Sbjct: 1 MKFWLYSSASLAACAGLIWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFREEISFHVMVLFTALVFLKIFHWLSQARIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWC-TLKVVENGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRM-DGAWTNKFTYLFYLELVS------------------EVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMT----PDACKKLPCSHIFHVD------------------CLKMWVQRQQTCPTCRSTI 333
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A484EAA8_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAA8_BRELC) HSP 1 Score: 258 bits (658), Expect = 4.910e-71 Identity = 153/376 (40.69%), Postives = 220/376 (58.51%), Query Frame = 1
Query: 1 MQFWKWFSTSV-------VLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGG----------FEDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIP 1077
M+FW + S S+ V T T +QFY ++++L T+K++L+VLGN L R +K +FLG LRD EVE L+EN R+A+TETCLALT+FR+E+S V+VLF+ L+F K FHWL+Q+R+E IEQ+D + T++RL L +L V D+ + C S+ + D+ PSV ILF FEF IL + T+ +Y LH+VD+R+ +G W K +Y F+LEL S E+ + YL+FF ++FT +GMPLHIVRDLW+S L+RR+ +Y RYR++ E+ + DK + M + KKL C IFH CL++W+Q+QQ+CPTCR+ IP
Sbjct: 1 MKFWLFSSASLAACVALLVYTYMTRQQFYPSIIYLVTSKISLLVLGNAGLVLTALFGRLVKTLFLGPLRDAEVELLHENVRYAVTETCLALTVFRDEISFNVMVLFTALIFLKIFHWLSQSRIEFIEQSDVVSRLTHVRLVALMTILSVVDMAFVVWC-SISLLDEGPSVFILFGFEFLILTITIAATILRYLLHIVDSRM-DGAWTNKFTYLFYLELVS------------------EITKLVVYLVFFTLIFTLFGMPLHIVRDLWLSIKNLQRRIASYYRYRKITSNLNDRFANPTAEELEETDKTCIICREEMT----PSTCKKLPCSHIFHIN------------------CLKMWIQRQQTCPTCRSSIP 334
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A3R7IL55_9STRA (RING-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IL55_9STRA) HSP 1 Score: 257 bits (656), Expect = 7.580e-71 Identity = 157/376 (41.76%), Postives = 219/376 (58.24%), Query Frame = 1
Query: 1 MQFWKWFSTSVVLTLG-------TVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGF----------EDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIP 1077
M+FW + S S+ +G T +QFY V++L T+K++++VLGN L R LK +FLG LRD EVE L+EN R+AITETCLALTIFREE+S V+VLF+ L+F K FHWL+QAR+E IEQTD + T++RL L +L D + C S+++ + PSV ILF FEF IL V V T +Y L++VD+R+ +G W K +Y F+LEL S E+ + YL+FF ++FT+YGMPLHIVRDLW+S L+RR+ +Y RYR++ E+ + D+ + M ++ KKL C IFH CL++W+Q+QQ+CPTCR+ IP
Sbjct: 1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPAVIYLVTSKVSVLVLGNAGLVLTTLFGRVLKSLFLGTLRDAEVELLHENVRYAITETCLALTIFREEISFHVMVLFTSLVFLKIFHWLSQARIEFIEQTDIISRLTHIRLVGLMAMLAAVDTAFVVWC-SLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRM-DGAWTNKFTYLFYLELVS------------------EITKLLVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIVSYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMT----PETCKKLPCSHIFHVD------------------CLKMWVQRQQTCPTCRSTIP 334
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A8J5IAT4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IAT4_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.460e-70 Identity = 172/404 (42.57%), Postives = 236/404 (58.42%), Query Frame = 1
Query: 1 MQFWKWFSTSVVLTLG-------TVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGF----------EDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIPA--RAPAAATR--AAAAAAPVDVPQPAA 1149
M+FW + S S+V +G T +QFY ++++L T+K++++VLGN L R LK FLG LRD EVE L+EN R+A+TETCLALTIFREE+S V+VLF+ L+F K FHWL+Q+R+E IEQTD + T++RL L V+L D + C S+++ + PSV ILF FEF IL V V T +Y L++VD+R+ +G W K +Y F+LEL S E+ + YLIFF ++FT+YGMPLHIVRDLW+S L+RR+ +Y RYR++ E+ + D+ + M D+ KKL C IFH CL++W+Q+QQ+CPTCR+ IP R PAAA AA AA PV+ PAA
Sbjct: 464 MKFWLYSSASLVACVGLLWYTYVTRQQFYPSIIYLATSKVSVLVLGNAGLVLTTLFGRLLKAFFLGTLRDAEVELLHENVRYAVTETCLALTIFREEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMVMLAAVDTGFVVWC-SLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRM-DGAWTNKFTYLFYLELVS------------------EVTKLVVYLIFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMT----PDACKKLPCSHIFHVD------------------CLKMWVQRQQTCPTCRSTIPTGPRRPAAAPEVPAARAARPVENNTPAA 825
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A8K1F9S9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1F9S9_PYTOL) HSP 1 Score: 255 bits (651), Expect = 6.220e-70 Identity = 162/396 (40.91%), Postives = 228/396 (57.58%), Query Frame = 1
Query: 1 MQFWKWFSTSVVL-------TLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVARALKVVFLGQLRDIEVEHLNENCRFAITETCLALTIFREELSTRVLVLFSVLLFCKAFHWLAQARVEHIEQTDNHALSTYLRLFCLQVVLIVADVYLMNQCISMQIADQSPSVLILFAFEFAILCVAAVCTLAKYGLHLVDARLIEGTWHAKASYTFFLELASEDXXXXXXXXXXXXXXXXELLRFFFYLIFFGIVFTFYGMPLHIVRDLWVSYSTLRRRLQAYNRYRQVGGF----------EDHMDADKNIFHFKFRMVHWDHMDSGKKLSCGRIFHFQXXXXXXXXXXXXXXXXXQCLRLWLQQQQSCPTCRADIP--ARAPAAATR-AAAAAAPV 1128
++FW + S S++ T T +QFY V++L T+K+++++LGN L + + R K +FLG LRD EVE L+EN R+AITETCLALTIFREEL+ +V VLF+ L+F K FHWLAQ+R+E IEQTD + T++RL L +L D + C M++ + PSV ILF FEF I+ + V +Y L+++D R+ + W K +Y F+LEL S E+L+ YL+FF ++FT+YGMPLHIVRDLW+S +L+RR+ +Y RYR++ E+ D D+ + M S KKL C IFH CL++W+Q+QQ+CPTCR+ IP +R P AAAAAAPV
Sbjct: 2 VKFWLYSSASLLACTALLWYTYMTRQQFYPAVIYLVTSKVSVLILGNAGLVVTILLGRLFKTIFLGSLRDAEVEILHENVRYAITETCLALTIFREELNFQVAVLFTSLIFLKVFHWLAQSRIEFIEQTDIVSRLTHIRLVALMTILAAVDTAFVVIC-GMKVMETGPSVFILFGFEFLIMLITLVAIFLRYVLYVIDTRM-DNNWANKFTYLFYLELVS------------------EILKLISYLVFFLLIFTYYGMPLHIVRDLWMSIKSLQRRIASYFRYRKITANLNERFPNPTEEELQDTDRTCIICREEMT----SASCKKLPCSHIFHMD------------------CLKMWVQRQQTCPTCRSTIPTGSRPPVVPQAPAAAAAAPV 355
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A836CBN8_9STRA (Riboflavin biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN8_9STRA) HSP 1 Score: 500 bits (1287), Expect = 4.140e-178 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
Query: 148 MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP
Sbjct: 1 MAANGGAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 248
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: D7FMH2_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH2_ECTSI) HSP 1 Score: 254 bits (649), Expect = 5.870e-79 Identity = 142/269 (52.79%), Postives = 175/269 (65.06%), Query Frame = 1
Query: 163 GAASSRPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQ-QQPLRVVLDRNLRIPEADQCQ----LLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPED---------------------GCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
G P VTLKLA+D+ GAVDD SE PKRFTS SLDAVHR+RRD AV+VGV TVVRD+PSLTVRRVPL GQ +QP RVVLDR LR+ A Q +L DGH ++++F + +ARAAEL V + D P +T D G L V+ L +RGI H++VEGGP +AR FLS++LVDRAII++AP++F +PVPS I LR AGLEL+G T+WG DE ECW++PGL WP GGVG+WP
Sbjct: 141 GRGRGMPSVTLKLAMDRNGAVDDMSEGPKRFTSPASLDAVHRIRRDCEAVLVGVGTVVRDDPSLTVRRVPLNGGQTRQPTRVVLDRTLRLTGAQAGQNPRAILRDGH-SSLVFYSAGCEDTEARAAELKADVKRSRTAVSDSPGETEPDTSHQKLAPVDFVGMPVQRPGAGVDLSGVLGALLERGIDHVLVEGGPSVARGFLSERLVDRAIIIRAPMEFVRPVPSDIATDTLRRAGLELVGCTKWGDDEAECWTRPGLGWPGGGVGSWP 408
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: I2CPJ6_NANGC (Riboflavin biosynthesis protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ6_NANGC) HSP 1 Score: 234 bits (597), Expect = 4.120e-73 Identity = 133/242 (54.96%), Postives = 166/242 (68.60%), Query Frame = 1
Query: 178 RPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDI--PTDTPEDGCPLLTVVRFLGQRGI-SHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQ-QPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
RP VT+KLAVD++GAVDD + P RFT SLDAVHRLRR++ AVVVGVETVVRD+PSLTVRRVPL Q+QP+RVVLDR+LRIP + LL+D H T V + P + RAA++MLS PV+ID I P PED PLL V+ L G+ HIMVEGGP A+ FL VDRA+I +A ++F+ P+PSG+D +VL+ AGL LG+ G D V CWS+P L WP + +WP
Sbjct: 20 RPRVTVKLAVDRKGAVDDATLKPGRFTCEASLDAVHRLRRESEAVVVGVETVVRDDPSLTVRRVPLRPDQRQPIRVVLDRSLRIPYSST--LLNDRHRTLVYYVQGPWRHM--RAADIMLSKFVAPVLIDCINEPELRPEDPAPLLEVLGRLYDMGVREHIMVEGGPRTAKAFLDAACVDRAVIFEAAMEFKGDPIPSGVDENVLKKAGLMYLGSYPSGVDMVHCWSRPDLPWPAQELSDWP 257
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A6U6BWZ9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BWZ9_GUITH) HSP 1 Score: 218 bits (555), Expect = 4.800e-66 Identity = 120/240 (50.00%), Postives = 164/240 (68.33%), Query Frame = 1
Query: 181 PLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPED-GCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQ-PVPSGIDHSVLRSAGLELLGTTQ-WGPDEVECWSKPGLEWPNGGVGNWP 891
P+VTLK+A+D+ GAVDD KRFTS +SLDAVHRLRR + AV+VG+ TVVRD+PSLTVRRVPLL+G++QPLR V+D +L+I EA C+++ DG+ T + +++ V R +L +S L + IPT T + L +++ L G+ +M+EGGP ++FL +LVDRAI++ AP+KF Q PVPS IDH VL++AGL LLG Q WG D V WSK L+WP+ + WP
Sbjct: 78 PIVTLKIALDENGAVDDLGITSKRFTSEQSLDAVHRLRRCSDAVLVGIGTVVRDDPSLTVRRVPLLEGREQPLRAVIDPSLKI-EA-HCKVMRDGYKTVIFHSDSDE--VDKRRIQL-ISELEATNQVSFIPTPTNQHRSLDLTSILGELSNLGVKELMLEGGPATVKRFLQQKLVDRAIVIVAPIKFDQLPVPSLIDHHVLKAAGLALLGEHQDWGKDSVSLWSKAQLQWPSPVISEWP 312
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A832V5V4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=2 Tax=Archaea TaxID=2157 RepID=A0A832V5V4_9ARCH) HSP 1 Score: 192 bits (489), Expect = 2.280e-55 Identity = 108/237 (45.57%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 181 PLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
PLVTLK+A+D+ GAVDDR+E RFTS ESLDAVHRLR+D A++VGV TV+RDNPSLTVRR+ L +G+Q PLRVVLDR L+ P D +++D H T + V+ R ++ V + + + G L ++ LG RG +++EGGP AR+FL+ + VDR +++KA V F QP P + +AGL+ L WG D V WSK GL WP V WP
Sbjct: 156 PLVTLKVAIDKNGAVDDRAEDSFRFTSQESLDAVHRLRKDVDAIIVGVGTVLRDNPSLTVRRIELGEGKQ-PLRVVLDRELKTP-IDSI-IVNDDHDTLIFH-------VEGREEKIAALNSRNNVEVHKLQSARNHSGVDLHLLLSLLGDRGYQEVLLEGGPETARRFLAAETVDRVVLIKADVDFSQPFPLSLGDEDFSAAGLQRLSDVHWGVDTVSRWSKAGLGWP---VDGWP 379
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A2E0K0L6_9EURY (Riboflavin biosynthesis protein RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E0K0L6_9EURY) HSP 1 Score: 191 bits (484), Expect = 8.390e-55 Identity = 109/238 (45.80%), Postives = 146/238 (61.34%), Query Frame = 1
Query: 178 RPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
RPLVTLK A+D G VD E+P RFTS ESLDAVHRLRR A++VGV T++RDNPSL VRRVP+ +G+Q PLR+VLDRNLRIP D+ ++L+DG T ++ T V ++ S +G G L+ ++ LG RGI ++VEGGP + +QF+ + LVDRAI++++ + SGI S L AGL L+ T WG D V+ WS+ L WP + WP
Sbjct: 155 RPLVTLKAAMDANGVVD--GESPGRFTSEESLDAVHRLRRHCDAILVGVNTIIRDNPSLNVRRVPIGEGKQ-PLRIVLDRNLRIP--DEVEVLTDGGETILVHTQLTDRGV------MLPSGMG---------------GVDLVALLEHLGDRGIQELLVEGGPIVWKQFIDEGLVDRAIVIQSQTLLGEGPASGISDSKLNDAGLNLIEQTTWGDDSVQFWSRTELPWP---MDLWP 363
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A842P3K4_9EURY (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A842P3K4_9EURY) HSP 1 Score: 189 bits (481), Expect = 2.600e-54 Identity = 103/237 (43.46%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 181 PLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
PLVTLK+AVD GAVDDR+E RFTS ESL+AVHRLR+D A++VG+ T++RDNPSLTVRR+ + G+Q PLRV+LDR L+ P +++DGH T +L V+ R E+ V + + + G L ++ LG RG +++EGGP AR+F++ LVDR II++ +F Q P + R+AGL LG ++WG D V+ WS+ L WP +WP
Sbjct: 144 PLVTLKIAVDSNGAVDDRAEDSFRFTSEESLNAVHRLRKDVDAIIVGIGTIIRDNPSLTVRRIEMGLGKQ-PLRVILDRELKTPL--DSTIVNDGHNTLILH-------VEGREGEIAALDSRETVEVQKLQSARSHSGVDLHLLLSLLGDRGFQEVLLEGGPETARRFIAAGLVDRLIIIQTKAQFSQGFPLSLGDDDFRNAGLVRLGDSEWGGDSVQRWSREDLNWP---AEDWP 367
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A7C7HSY4_9ARCH (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=4 Tax=Archaea TaxID=2157 RepID=A0A7C7HSY4_9ARCH) HSP 1 Score: 189 bits (479), Expect = 6.640e-54 Identity = 109/238 (45.80%), Postives = 143/238 (60.08%), Query Frame = 1
Query: 178 RPLVTLKLAVDQQGAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLTVVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
RPLVTLK+A D+ GAVDD + A KRFTS +SLDAVHRLRRD A+++GVET+VRDNPSLTVRR+ L G+Q P+R++LDR LR P +L+D H T +L T + A ++ + V+ L + +G L V+ LG R IMVEGG AR+FL+ L+DRAII++ +F P+ GI+ L L + WG D V+ WSK LEWP NWP
Sbjct: 153 RPLVTLKIATDRNGAVDDLALASKRFTSPDSLDAVHRLRRDCDAIIIGVETIVRDNPSLTVRRIELGHGRQ-PVRIILDRALRTPL--DSTVLADEHQTMILHTEGEYENITALSSRENVEVVCL-------KSADSHNGVDLNRVLALLGDREFQEIMVEGGAETARRFLAAGLIDRAIIIRTEDEFTTPLTLGIESDHLIDKDLAIYREVDWGGDRVQLWSKEKLEWP---CPNWP 377
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A7S2LDW0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LDW0_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.890e-53 Identity = 107/242 (44.21%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 187 VTLKLAVDQQ---GAVDDRSEAPKRFTSSESLDAVHRLRRDAGAVVVGVETVVRDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLFTNTPGTFVKARAAELMLSVLGLPVMIDDIPTDTPEDGCPLLT---VVRFLGQRGISHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPN-GGVGNWP 891
VTLK+A D G D +RFTS ESLD VHRLRRD+ AV+VG TV D+ SL+VRRV L +GQ+QP+RV+LD +L + + + +DG T V ++ + V+ +P+ D D D P L+ +V+ L RG++HIMVEGGP AR FL +VDRAI+V+APV+FQ+PVP+ +D +++AGL ++GTT+ G D VE W++ GLEWPN + +WP
Sbjct: 63 VTLKMAFDSSPVWGVADLSETKSERFTSPESLDMVHRLRRDSSAVLVGRGTVEFDDCSLSVRRVELGEGQEQPVRVILDPSLSLVGGEYA-IFNDGLRTIVYYSQSAAQNKDVPLPSSDDCVIFVPLAQSD---DEKNDKIPSLSPSEIVQDLATRGLTHIMVEGGPATARAFLHSGVVDRAILVRAPVEFQEPVPAQMDEDTMKTAGLNMIGTTEMGGDVVEYWTREGLEWPNPDDLSSWP 300
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Match: A0A7S2UU33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU33_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.100e-52 Identity = 100/206 (48.54%), Postives = 129/206 (62.62%), Query Frame = 1
Query: 337 RDNPSLTVRRVPLLDGQQQPLRVVLDRNLRIPEADQCQLLSDGHPTAVLF----------TNTPGTFVK----ARAAELMLSVLGLPVMIDDIPTDTP---EDGCPLLTVV-RFLGQRGI---SHIMVEGGPCIARQFLSDQLVDRAIIVKAPVKFQQPVPSGIDHSVLRSAGLELLGTTQWGPDEVECWSKPGLEWPNGGVGNWP 891
RDNPSLTVRRVPL + Q+ P+RVVLD L I E ++ +L DG+PT V F TNT G + +AA LML LG PV ++P D +DG +L + LG G+ S +M+EGGP A++FLS + RAII+KA V+F+ PVPSGID VL+SAGLE +GTT++GPD CW K G EWP GG+ +WP
Sbjct: 1 RDNPSLTVRRVPLDEDQRPPVRVVLDGRLSIAENEEVNVLKDGNPTIVFFSEMPTQAEQPTNTQGETYEFTRYGQAANLMLGCLGAPVAFKELPLDRSNSFKDGNFMLDAMWNELGAMGMARNSRVMLEGGPETAKKFLSQGQITRAIIIKADVEFKDPVPSGIDEEVLKSAGLEFVGTTKYGPDTAYCWKKAGTEWPQGGIESWP 206 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to top
BLAST of jgi.p|Trimin1|350701 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12943 ID=mRNA_12943|Name=jgi.p|Trimin1|350701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2998bp|location=Sequence derived from alignment at Contig_69:478092..494325+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGTTCTGGAAGTGGTTCTCGACCAGCGTGGTGCTGACCCTGGGGACback to top protein sequence of jgi.p|Trimin1|350701 >Trimin1|350701|estExt_Genemark1.C_Ctg_690041 ID=Trimin1|350701|estExt_Genemark1.C_Ctg_690041|Name=jgi.p|Trimin1|350701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=792bp MQFWKWFSTSVVLTLGTVEQFYWTVVFLTTNKLALVVLGNMSLASVLAVAback to top mRNA from alignment at Contig_69:478092..494325+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12943 ID=mRNA_12943|Name=jgi.p|Trimin1|350701|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=16234bp|location=Sequence derived from alignment at Contig_69:478092..494325+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_69:478092..494325+ >mRNA_12943 ID=mRNA_12943|Name=jgi.p|Trimin1|350701|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2376bp|location=Sequence derived from alignment at Contig_69:478092..494325+ (Tribonema minus UTEX_B_3156 )back to top |