mRNA_12917 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A835YPD3_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD3_9STRA) HSP 1 Score: 572 bits (1475), Expect = 1.090e-206 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 Query: 1 MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 828 MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV Sbjct: 1 MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 276
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE) HSP 1 Score: 239 bits (610), Expect = 3.100e-68 Identity = 114/248 (45.97%), Postives = 161/248 (64.92%), Query Frame = 1 Query: 61 FMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDM 804 + P L PMP RFL+AE D KA ARW T++WR+ + D +L +PHP+F LIK Y CFHLPD +G + YYE PG ++A LK G+ + +L HY YCMEFLW+ LQPR+ ++TIV D G V +++L GE+ +FLK++V M+S HYP RSFKI+ILNAPS N + +K ++ + T+ KI ++P + + E+L++IP E+LP YGG + LG SP E+++ AHV L M Sbjct: 1351 YPPPSGSSLAPMPHRFLLAESMDVAKAWARWEATLDWRKETEADTILDRPHPKFALIKSKYAHCFHLPDKDGRVTYYERPGMSDIAELKRLGITKSELLDHYVYCMEFLWKVLQPRQSQRITIVIDLAG--VRFRDLVGESLAFLKTSVGMMSRHYPQRSFKIMILNAPSFFNSVFALVKPMLNEATKKKIDLLPVANVGDEMLKVIPSEHLPLHYGGAGEVALGSSPQELAMLAHVEKVLAENGQSM 1596
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A7S3XQ11_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ11_HETAK) HSP 1 Score: 177 bits (448), Expect = 9.420e-51 Identity = 96/273 (35.16%), Postives = 154/273 (56.41%), Query Frame = 1 Query: 4 ESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPV 822 E G C + LG G + G +P+ F+ AE G+ A R+ T+ WR D +L +PH +FD+ K Y F+ D G++VY E G++++ ++ +G+ +DL RHY Y ME+LW L P + D++T V D EG+++ ++ GE +F+KS + M S HYP R K+ I+NAPS ++ Y A+K +IP+ TR KIS++ S+ E++++I P+ +P +YGG+ + SP E RA V ++T + P PV Sbjct: 3 EGGGGEGFCLMDFLGAPGRVAAALGEG--DVPQLFVEAEFGNRAAALDRYRKTLLWRWEVGADRILDEPHLKFDIFKKCYPHSFYGRDREGNVVYIEQAGRVDVEGMRRHGLSLDDLLRHYMYNMEYLWGRLSPGKADRMTAVLDLEGVRL--RDFAGEVAAFVKSAIGMNSTHYPQRGHKVFIINAPSWFSMVYKAVKPLIPEVTRKKISILD-SRFYDEMVKVIDPDQIPQEYGGSGAHAMADSPFEQQYRAFVTAVAEKTGKTLEPFVPV 270
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A7S2AKR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKR7_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.630e-47 Identity = 88/239 (36.82%), Postives = 134/239 (56.07%), Query Frame = 1 Query: 88 PPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDM 804 PPMP RFL AE GD KA RW+ T WR+ + L +PHP F L+K+ Y +H D G++VYYE PG +++ LK G+ E H Y EFLWR LQP E D++T V D G+ + S +K+ V AHYP RS+KI++LN P+ +G +K ++ + KI++ ++ + +L+II +N+P YGG+ LG E++L HV+ +++ N ++ Sbjct: 127 PPMPTRFLNAEAGDEVKATQRWLDTCRWREEHGAEEALDKPHPDFALLKNCYPHFYHGRDREGNIVYYECPGGLDIDRLKTAGITCEKFVDHVMYQQEFLWRKLQPSEEDRVTAVIDLGGVNSMFI-FNKALISIVKACVVTTGAHYPERSYKILVLNVPNWFGTLFGFVKPLLNDVQKAKINIFRQHEVHSGMLKIIDDDNIPTAYGGSSPDELGNWEGELTLTTHVLETMRKANVEL 364
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: G4YXA9_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YXA9_PHYSP) HSP 1 Score: 172 bits (436), Expect = 1.580e-45 Identity = 88/223 (39.46%), Postives = 130/223 (58.30%), Query Frame = 1 Query: 103 RFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771 RF+ E+GD +K AR+ T++WR+ D+DN+L PHP F++IK +Y FH +GH VYYE PG++++ ALK G+ +DL RHY Y E+LWR ++P + + V D G + +L GE F+K + AHYP RS I I+N P N+ + +K +I TR+K+ ++ S + EL +I EN+P +GG LG S E +L AHV Sbjct: 484 RFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTG--IGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGGGGAA-LGDSEEEHALAAHV 703
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A0P1ALM7_PLAHL (Sec14 cytosolic n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ALM7_PLAHL) HSP 1 Score: 171 bits (433), Expect = 2.270e-45 Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 1 Query: 103 RFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771 RF+ E+GD +K AR++ T++WR+ ++DN+L PHP F++IK Y FH +GH VYYE PG++++ ALK G+ +DL RHY Y E+LWR ++P ++ + V D G + +L GE F+K + HYP RS I I+N P N+ + +K +I TR+K+ ++ S + EL +I EN+P +GG ++ LG S E +L AHV Sbjct: 416 RFIAGEKGDEEKGRARYLATLKWRKENNIDNILVTPHPNFEIIKRSYPQYFHGRTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDLGRSITVLDVSG--IGMYDLGGEVLDFIKRASAFTGEHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE-SVALGDSEEEHALAAHV 635
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A8J5X530_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X530_DIALT) HSP 1 Score: 164 bits (414), Expect = 3.200e-45 Identity = 92/255 (36.08%), Postives = 140/255 (54.90%), Query Frame = 1 Query: 67 PEVVPGLPPMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMAT-ELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTNSDMLPVPPVAV 828 P P PP+P FL AE A++A ARW T+ WR + +D +LS+P+ F +K Y HLPD GH+ Y+E+PG++N+ ALK GV+ RHY + E+ W+ P+E + T++FD G + +L E +K V + HYP+R+ +I++LN P+ + LK I+ K+ + P Q+A +L + I NLP QYGG + LG+S E ++RA V +R + PV P+AV Sbjct: 65 PGAAPDEPPVPANFLRAEP-TAERARARWQQTLRWRADERVDVILSEPNAVFYALKAHYPHYLHLPDKEGHLTYWELPGRLNLGALKKLGVDPSRGYRHYVWHTEYTWQLAAPKEGAQATVLFDAAGF--GWDQLSFELLELIKRIVYFTNQHYPHRAARIIVLNTPAWYGALHSMLKPIMSDVCETKLVFLSPQQVAAGDLTRWIDAANLPAQYGGKSRLQLGESRHEKAMRAFVDKANRRAG--VRPVQPLAV 314
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.990e-45 Identity = 86/235 (36.60%), Postives = 127/235 (54.04%), Query Frame = 1 Query: 91 PMPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPREVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHVMTELQRTN 795 P RF+ AE+GD +K RW T +WR+ ++D +L +P P FD+IK Y FH NGH VYYE G ++ LK G+ + L RHY + EFLW+ L+P + + V D E + +L G+ SF++ ++ +AHYP RS +I+++N P + + A+ +I T+ KI + S ELL I + LP YGGT + LG+S E L HV + L N Sbjct: 27 PFSPRFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTLKKSGLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENF--GFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTSRDELLAAIDLDQLPSNYGGT-SCALGESDEEKRLAQHVQSYLSGNN 258
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A6H5K979_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K979_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.660e-43 Identity = 89/229 (38.86%), Postives = 137/229 (59.83%), Query Frame = 1 Query: 94 MPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPR-EVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVI--PPSQMATELLQIIPPENLPPQYGGTCTIPLGQSPAEVSLRAHV 771 +P R+L GD +A RW T+EWR + +D VL +P P F+LIK Y H NG V+ E+PG++++ A++ GV E L+RHY + E++W L+P E + V D +GL + ++L GE F+K +++ HY RS ++ I+NAPS +L + ++ ++ +RT+ KI +I ++A LL+ I PENLP QYGGTC + LG+S E LRA+V Sbjct: 301 VPGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGM--RDLAGEALGFVKQATAIIQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEETDLRAYV 527
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Match: A0A662WMZ0_9STRA (CRAL-TRIO domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMZ0_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.930e-43 Identity = 81/224 (36.16%), Postives = 123/224 (54.91%), Query Frame = 1 Query: 94 MPRRFLIAEEGDAKKAAARWVTTVEWRQSQDMDNVLSQPHPQFDLIKHFYKFCFHLPDCNGHMVYYEMPGQMNMAALKDYGVEREDLRRHYCYCMEFLWRFLQPR----------EVDKLTIVFDCEGLKVNYQELRGETFSFLKSTVSMLSAHYPNRSFKIVILNAPSALNLFYGALKSIIPQRTRDKISVIPPSQMATELLQIIPPENLPPQYGGTCTIPLG 735 +PR FL+AE GD KA R+ T+ WR+ D++L+ P +D IK Y H D GH +Y+E G +N+ LK G+ +EDL RHY + MEF ++ + KL IV D G + +++ GE F F++ ++ HYP RSFKI +N PS + + +K ++ + TR K +++ S+ A LL+ I ENLP +YGG+C+ P G Sbjct: 63 IPRSFLVAENGDVAKATERYEATLAWRKETMADSILTMPQTHYDTIKTHYTQFLHKHDKLGHPLYFEKIGSINIGQLKKAGIAQEDLFRHYLFAMEFTLKYAAHELCQCDACATSDTQKLCIVLDARG--IGMRDMGGEAFEFIRKCTGVMQRHYPQRSFKIFFVNVPSWFGMAWKGVKPLLNEATRAKTNILTESETAAALLEFIDAENLPVEYGGSCSCPGG 284 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170085 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=831bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGAGCAACGGCGACGGCAACATCTGCGGTCCCAACACCCTGGGCTTback to top protein sequence of jgi.p|Trimin1|170085 >Trimin1|170085|e_gw1.69.54.1 ID=Trimin1|170085|e_gw1.69.54.1|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=277bp MESNGDGNICGPNTLGLGGDFMPEVVPGLPPMPRRFLIAEEGDAKKAAARback to top mRNA from alignment at Contig_69:212048..215230+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3183bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_69:212048..215230+ >mRNA_12917 ID=mRNA_12917|Name=jgi.p|Trimin1|170085|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=831bp|location=Sequence derived from alignment at Contig_69:212048..215230+ (Tribonema minus UTEX_B_3156 )back to top |