mRNA_12837 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350802
Unique NamemRNA_12837
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A835YU14_9STRA (PlsC domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU14_9STRA)

HSP 1 Score: 697 bits (1800), Expect = 4.050e-251
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 1 
Query:    1 MSVAVPLVLLTKLESEIIALGLGPPFPRLSTGAKRILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGEEGPWACATTRSYAWGRSAXXXXXXXXXXXXXXXXXXXXGGGAGXXXXXXXXXXXXXVWEDAXXXXXXXXXXXXXXXXXXXVEEEPSDASSQSAASEEQLEHDRCVAAAALRESLLGGLENPPKGVSTCAGVMQWVVTYAAAACTYWLIASAVLAAAPSATAALGLSGGQAAALWLLYTASVTIMVYVGNCGIPGRKRTSKAHRS 1254
            MSVAVPLVLLTKLESEIIALGLGPPFPRLSTGAKRILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGEEGPWACATTRSYAWGRSAXXXXXXXXXXXXXXXXXXXXGGGAGXXXXXXXXXXXXXVWEDAXXXXXXXXXXXXXXXXXXXVEEEPSDASSQSAASEEQLEHDRCVAAAALRESLLGGLENPPKGVSTCAGVMQWVVTYAAAACTYWLIASAVLAAAPSATAALGLSGGQAAALWLLYTASVTIMVYVGNCGIPGRKRTSKAHRS
Sbjct:    1 MSVAVPLVLLTKLESEIIALGLGPPFPRLSTGAKRILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGEEGPWACATTRSYAWGRSAXXXXXXXXXXXXXXXXXXXXGGGAGXXXXXXXXXXXXXVWEDAXXXXXXXXXXXXXXXXXXXVEEEPSDASSQSAASEEQLEHDRCVAAAALRESLLGGLENPPKGVSTCAGVMQWVVTYAAAACTYWLIASAVLAAAPSATAALGLSGGQAAALWLLYTASVTIMVYVGNCGIPGRKRTSKAHRS 418
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: D8LSD1_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 3.030e-39
Identity = 87/218 (39.91%), Postives = 134/218 (61.47%), Query Frame = 1 
Query:    7 VAVPLVLLTKLESEI-IALGLGPPFPRLSTGAK-----RILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRVGE 642
            V++PL++LT +E +I +AL  G      ++G       R+   W+LL+ G++VR E  G    E   +PA+++FTH S LD +++L   P    A+VK  + AVP LGW+  + G +PI+R  R +AV ++  A E  + +   +A++PEGTRS+TGQL PFKKGAFH+ +QL+WP++P+TIHGA+ L+P +         + G V V+YH  I   E
Sbjct:   96 VSIPLIMLTMVEQQIFLALNGGSNGGAGNSGGLSSILIRLDCAWLLLLMGIQVRAEFMG----ESLSRPAMLLFTHVSTLDAVVILGTLPRALCAVVKEELLAVPVLGWIMASRGAIPINRGHRASAVQALAEAAERARELQMFVAMAPEGTRSKTGQLGPFKKGAFHMQEQLQWPVIPVTIHGAYELFPLKWN-----VNQCGKVVVKYHRPIEAAE 304
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A024UVB1_9STRA (PlsC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVB1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.080e-27
Identity = 63/167 (37.72%), Postives = 95/167 (56.89%), Query Frame = 1 
Query:  121 MLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGW-LAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRY 618
            + +  G++V + GR     E  +   ++MFTH SNLD L++    P   + I K ++F +P +GW     FG +PIDRS R+A+  S+ A  +     G S+A+SPEG+RS++GQL+ FKKG F+L   +   + P  +HGAF LWPP     G ++   G   V Y
Sbjct:  175 LCVAAGIQVSISGRDNMKMENLKDSTILMFTHGSNLDGLMIQGTSPTSLKFIGKKALFMLPIVGWGFRWGFGNIPIDRSNREASKRSLKALAKAVIEYGRSVAISPEGSRSKSGQLQDFKKGPFYLQSDVNKSITPAVVHGAFELWPP-----GRIFTLSGKAHVEY 336
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: R1D838_EMIHU (PlsC domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D838_EMIHU)

HSP 1 Score: 122 bits (305), Expect = 3.880e-27
Identity = 75/156 (48.08%), Postives = 96/156 (61.54%), Query Frame = 1 
Query:  112 AQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCG-FRA---IVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTA-AGEECQRVGYSLAVSPEGTRSRTGQL-RPFKKGAFHLAQQLRWPMLPLTIHGAFALWPP 561
            A  +L   GVRVRVEG G           +I++ HASNLDP I+  A  CG  RA   + K  +FAVP  GW+++A G VPI+R     ++A+M         R   S+AVSPEGTR++ G L  PFKKG FHL+QQ++ P+LPL IHGAF LWPP
Sbjct:  122 AHLVLRAAGVRVRVEGEGAGRWSGIPH-GVIVYNHASNLDPFILFVA--CGGHRAPKFVGKKVLFAVPIFGWMSLALGQVPINRGDPKKSIATMNERVAAIMSRWSRSVAVSPEGTRTKDGHLVLPFKKGVFHLSQQMQAPILPLAIHGAFDLWPP 274
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A485KN70_9STRA (Aste57867_9414 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN70_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.170e-25
Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1 
Query:  118 WMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGW-LAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRY 618
            W+ L +G+++   GR     ++     + MFTH SNLD L++    P   + I K ++F +P +GW    AFG +PIDRS  +A+  S+ A        G S+A+SPEGTRS+ GQL  FKKG F+L   ++  + P  +HGA+ LWPP     G L+   G   V Y
Sbjct:  174 WLCLASGIQIYTNGREN-LGDKLTDSTIAMFTHGSNLDGLMIQGTSPTTLKFIGKKALFMIPIVGWSFRWAFGNIPIDRSNIEASKRSLKALASAVIDYGRSVAISPEGTRSKCGQLEDFKKGPFYLQTDVKKSITPCLVHGAYELWPP-----GRLFTLSGKAYVDY 335
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A6G0XGI1_9STRA (PlsC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGI1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.180e-25
Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 1 
Query:  121 MLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGW-LAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPP 561
            + L +G+++    R     +  +   ++MFTH SNLD L++    P   + I K  +F +P+ GW    AFG +PIDRS R+A+  S+ A  +     G S+A+SPEGTRS  GQL+ FKKG F+L   +   + P+ +HGAF LWPP
Sbjct:  175 LCLASGIQIITNNRENLTFKALKDATIVMFTHGSNLDGLMVQGTSPTTLKFIAKKVLFMIPFAGWGFRWAFGNIPIDRSNREASKRSLKALAKAVIFYGRSIAISPEGTRSTNGQLQDFKKGPFYLQTDVNKSISPVVVHGAFELWPP 322
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A4D9D1W3_9STRA (PlsC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1W3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.780e-25
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 1 
Query:  100 KRILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRY 618
            ++ + +  L + GV    EG+    K  ++ P +++F H SNLD  + L + P  F++I K  I+ +PY+GWLA     +PIDR  R+ A+  +  A   C   G ++A+SPEGTRS+TGQL  FKKG F++  + R  + P+ I G F LWPP+       +  PG V + Y
Sbjct:  194 QKAVGRGFLYLAGVFYTEEGKA---KGGYRTPLVVLFQHGSNLDGFLFLDSFPQFFKSIGKDDIYLMPYVGWLAYVIATLPIDRRHRNEAIKQLGRATRACA-SGTAVALSPEGTRSKTGQLMRFKKGPFYVQAESRASIAPVVIQGTFELWPPKY-----FFTCPGQVCMNY 357
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A0D2VMF6_CAPO3 (1-acyl-sn-glycerol-3-phosphate acyltransferase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VMF6_CAPO3)

HSP 1 Score: 117 bits (292), Expect = 9.220e-25
Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 1 
Query:  103 RILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRYHALIRV 636
            R  A+ +L V GV +RV+G           P + MF H+S+ D + + +A P  F+ + K  +F VP +GW     G + IDRS    A  S+  A  +  R G S+A+SPEGTRS++G +  FKKG FHLA+Q+  P+ P+ +  AF LWP      G ++  PG V V +   I +
Sbjct:  299 RAFAKGLLRVCGVVLRVDGYD---HLDCNNPTVAMFNHSSSTDVVALTAACPVAFKFVAKKQLFYVPIIGWALGLIGHIAIDRSNLSKAKLSLEKAVRKIHRWGRSIAISPEGTRSKSGLIAEFKKGPFHLARQVNLPITPIIMTNAFELWPH-----GQIWTEPGVVDVHFLPRITI 468
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BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A2F0AQB2_9DELT (PlsC domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2F0AQB2_9DELT)

HSP 1 Score: 111 bits (277), Expect = 2.770e-24
Identity = 68/156 (43.59%), Postives = 88/156 (56.41%), Query Frame = 1 
Query:   79 PRLSTGAKRILAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAF 546
            PR      R + + +LL  G R+ + GR   F +   +  + +F H S LD  IML+  P    A+ K   F+VP  G +   FG VP+DR  R AA+ASM A G      G SL VSPEGTRS TG+L  FKKG FHLA + + P++P  IHGAF
Sbjct:   61 PRAIHQITRAICRILLLCAGQRLTINGR---FPDVTSQAYIYVFNHTSMLDTFIMLAILPEFTGAVGKKEQFSVPIWGAILRRFGAVPLDRDNRAAAIASMDAVGRSFDE-GLSLLVSPEGTRSLTGELGAFKKGPFHLAVRHQVPVIPTVIHGAF 212
[Close]
BLAST of jgi.p|Trimin1|350802 vs. uniprot
Match: A0A6G0XGL3_9STRA (PlsC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGL3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 6.730e-24
Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = 1 
Query:  109 LAQWMLLVTGVRVRVEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAVPYLGWL-AMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRSRTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPGTVGVRY 618
            + + + +  GV +  +G     K       + MFTH SNLD  ++L+  P   + I K ++F VP +GW+    FG VPIDRS R+ A  S+    E     G S+A+SPEG R++ GQL  FKKG F+L   +  P+ P+ I G + LW P     G  +A PG   VR+
Sbjct:  171 IGRLICMCAGVEITTDGTEKNLKNLKDPSTVAMFTHGSNLDTPMILAVSPVTVKLIGKKTLFLVPIIGWVFRWGFGLVPIDRSNREKAKKSLKDLAEAVNDYGRSIAISPEGKRTKNGQLCDFKKGPFYLQADVNKPITPVIIQGVYELWSP-----GRTFAVPGKCLVRF 336
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350802 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU14_9STRA4.050e-251100.00PlsC domain-containing protein n=2 Tax=Tribonema m... [more]
D8LSD1_ECTSI3.030e-3939.911-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A024UVB1_9STRA1.080e-2737.72PlsC domain-containing protein n=2 Tax=Aphanomyces... [more]
R1D838_EMIHU3.880e-2748.08PlsC domain-containing protein n=1 Tax=Emiliania h... [more]
A0A485KN70_9STRA1.170e-2538.10Aste57867_9414 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XGI1_9STRA1.180e-2539.86PlsC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A4D9D1W3_9STRA1.780e-2536.99PlsC domain-containing protein n=2 Tax=Monodopsida... [more]
A0A0D2VMF6_CAPO39.220e-2537.081-acyl-sn-glycerol-3-phosphate acyltransferase n=2... [more]
A0A2F0AQB2_9DELT2.770e-2443.59PlsC domain-containing protein n=1 Tax=Myxococcale... [more]
A0A6G0XGL3_9STRA6.730e-2436.84PlsC domain-containing protein n=1 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_73contigContig_73:9211..16770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350802|estExt_Genemark1.C_Ctg_730003
BRITEko00000,ko00001,ko00002,ko01000,ko01004
KEGG rclassRC00004,RC00037,RC00039
KEGG ReactionR02241,R09381
KEGG ModuleM00089
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975
KEGG koko:K00655,ko:K13509
EC2.3.1.51
Description1-acylglycerol-3-phosphate O-acyltransferase activity
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0204@1|root,KOG2848@2759|Eukaryota
Evalue3.3e-40
Seed ortholog2880.D8LSD1
Hectar predicted targeting categoryother localisation
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-21_003240.1
TranscriptId351124
TrackFilteredModels1
ProteinId350802
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350802gene_12837Tribonema minus UTEX_B_3156 geneContig_73 9211..16770 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350802Trimin1|350802|estExt_Genemark1.C_Ctg_730003Tribonema minus UTEX_B_3156 polypeptideContig_73 9269..16770 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12837_10exon_12837_10Tribonema minus UTEX_B_3156 exonContig_73 9211..9376 -
exon_12837_9exon_12837_9Tribonema minus UTEX_B_3156 exonContig_73 10552..10806 -
exon_12837_8exon_12837_8Tribonema minus UTEX_B_3156 exonContig_73 11729..11801 -
exon_12837_7exon_12837_7Tribonema minus UTEX_B_3156 exonContig_73 11888..11942 -
exon_12837_6exon_12837_6Tribonema minus UTEX_B_3156 exonContig_73 12164..12237 -
exon_12837_5exon_12837_5Tribonema minus UTEX_B_3156 exonContig_73 12319..12365 -
exon_12837_4exon_12837_4Tribonema minus UTEX_B_3156 exonContig_73 12450..12687 -
exon_12837_3exon_12837_3Tribonema minus UTEX_B_3156 exonContig_73 13836..13960 -
exon_12837_2exon_12837_2Tribonema minus UTEX_B_3156 exonContig_73 15004..15064 -
exon_12837_1exon_12837_1Tribonema minus UTEX_B_3156 exonContig_73 16550..16770 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12837UTR3_12837Tribonema minus UTEX_B_3156 three_prime_UTRContig_73 9211..9268 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12837CDS_12837Tribonema minus UTEX_B_3156 CDSContig_73 16550..16770 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12837 ID=mRNA_12837|Name=jgi.p|Trimin1|350802|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1315bp|location=Sequence derived from alignment at Contig_73:9211..16770- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGTGGCTGTCCCGCTGGTGCTGCTCACCAAGCTGGAGTCAGAGAT
CATAGCCCTAGGCCTAGGGCCTCCTTTTCCACGGCTGAGCACTGGTGCGA
AGCGCATCCTCGCTCAGTGGATGCTGCTGGTGACGGGGGTGCGGGTGCGG
GTGGAGGGGAGGGGGGGGGAGTTCAAGGAGCGGTTTCAAAAGCCGGCGCT
GATCATGTTCACGCATGCCAGCAACCTGGATCCACTCATTATGCTATCGG
CGCATCCATGCGGGTTCAGGGCCATCGTCAAGCACTCCATCTTTGCTGTG
CCGTACCTGGGGTGGCTGGCGATGGCGTTTGGGTGCGTGCCCATCGACAG
GAGCCGGCGGGACGCTGCGGTGGCATCGATGACTGCGGCAGGGGAGGAGT
GCCAAAGGGTGGGCTACTCGCTCGCGGTCTCGCCGGAGGGGACGCGCAGC
CGCACGGGGCAGCTGCGGCCCTTCAAGAAGGGCGCCTTCCACCTCGCGCA
GCAGCTGCGGTGGCCCATGCTGCCGCTCACCATCCACGGGGCATTTGCGC
TGTGGCCGCCGCGCGCCGCGCGCGCAGGGGCGCTGTACGCGCGGCCGGGG
ACTGTGGGCGTGCGCTACCACGCGCTCATACGCGTGGGGGAGGAGGGACC
GTGGGCGTGCGCTACCACGCGCTCATACGCGTGGGGGAGGAGCGCCGGCG
CGCTGTACGCGCGGCCCGGGGCCGTGGGCCTTCGCTACCACGCACTCATA
CGCGTGGGGGGCGGAGCGGGGCCCGGGACCGTGGGCGTGCGGTACCACGC
GCTTATACGCGTGTGGGAGGACGCGGGCGCACTGTACGCACGGCCCGGTA
CCGTGGGCATGCGCTACCACGCGCTCATTCGCGTGGAGGAGGAGCCATCC
GACGCCAGCTCGCAGTCCGCAGCAAGCGAGGAGCAGCTCGAGCACGACCG
CTGCGTTGCTGCAGCAGCGCTCAGGGAGTCCCTCCTGGGGGGCCTGGAGA
ACCCCCCAAAGGGGGTCAGCACGTGCGCGGGGGTCATGCAGTGGGTGGTC
ACGTACGCCGCCGCCGCGTGCACGTACTGGCTCATTGCAAGCGCCGTCCT
GGCGGCGGCGCCCAGCGCGACGGCGGCGCTGGGTCTGAGCGGCGGGCAGG
CGGCGGCGCTGTGGCTGCTGTACACGGCAAGCGTGACTATCATGGTCTAT
GTTGGCAACTGCGGGATACCGGGACGCAAGCGCACCAGCAAGGCGCATCG
GAGCTGATCTCAGACACTGTCGCTGTGGTGGACCGCCTCTCTTCTTTGTA
CGATTTTGATGATAG
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protein sequence of jgi.p|Trimin1|350802

>Trimin1|350802|estExt_Genemark1.C_Ctg_730003 ID=Trimin1|350802|estExt_Genemark1.C_Ctg_730003|Name=jgi.p|Trimin1|350802|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=419bp
MSVAVPLVLLTKLESEIIALGLGPPFPRLSTGAKRILAQWMLLVTGVRVR
VEGRGGEFKERFQKPALIMFTHASNLDPLIMLSAHPCGFRAIVKHSIFAV
PYLGWLAMAFGCVPIDRSRRDAAVASMTAAGEECQRVGYSLAVSPEGTRS
RTGQLRPFKKGAFHLAQQLRWPMLPLTIHGAFALWPPRAARAGALYARPG
TVGVRYHALIRVGEEGPWACATTRSYAWGRSAGALYARPGAVGLRYHALI
RVGGGAGPGTVGVRYHALIRVWEDAGALYARPGTVGMRYHALIRVEEEPS
DASSQSAASEEQLEHDRCVAAAALRESLLGGLENPPKGVSTCAGVMQWVV
TYAAAACTYWLIASAVLAAAPSATAALGLSGGQAAALWLLYTASVTIMVY
VGNCGIPGRKRTSKAHRS*
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mRNA from alignment at Contig_73:9211..16770-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12837 ID=mRNA_12837|Name=jgi.p|Trimin1|350802|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7560bp|location=Sequence derived from alignment at Contig_73:9211..16770- (Tribonema minus UTEX_B_3156 )
ATGAGCGTGGCTGTCCCGCTGGTGCTGCTCACCAAGCTGGAGTCAGAGAT
CATAGCCCTAGGCCTAGGGCCTCCTTTTCCACGGCTGAGCACTGGTGCGA
AGCGCATCCTCGCTCAGTGGATGCTGCTGGTGACGGGGGTGCGGGTGCGG
GTGGAGGGGAGGGGGGGGGAGTTCAAGGAGCGGTTTCAAAAGCCGGCGCT
GATCATGTTCACGCATGCCAGGTGAGAATGGAGGTGACAGTTGCGTGTAA
CGGTGGAGGTTTCTTGTGTTAGATGGGACATGTCAGTACTTGAAGCTGTT
CAAGAGCAGTTTTATACTTGAGCTTACACTTGCAGGTAAGGACAGGGGTG
AACAGACGAACCTCACATGGAGTTGGCTGGAAGCTATGCGGAAATTTCAG
TGCCACCCGGCTATGGGCCAACCAGGAGCAGTCAATATGCTTCCATGCAC
ATCAAATACCCACATGCTGTCAACACCAGCGACGTTGCAGAGCCTGCTAG
CTGCCGCAAAATATGTATGGCAAAGTCTTGCTACGTTGGAGAGTTGCACA
CACTGGCAGTGACCACTTTGACGTGTGCCCCATACTGAAGTTTTTTTATC
AACGATCTTGCTATGTTGACATGTGTGCCCCACACTGAAGTATTCAAACC
AATACTTTGAAATACTTTCAAAAATACTTCAGTACGGGGGCAAAGTGGTC
ACTGCCAGTGTGTGCAACGCTTCAACGTAGCAAGACCTTACCACACGTAC
TGAACATGCTGGCACTGATCGTGTTGGCATATGCCCCATGCATTTGTAAG
CTCAATACAAGCAAGAGTTGACTGGAGCTGGTTGGGACACGCCCCTTGCA
TAAGCTCAAGACAGAGTTGACTGGAGCGGGATGGAGGGCAGGGAACCTTG
TCTCGATGTCAATGACATTGTTGATTCAATAACACTGTTGATTATGTATG
TGGGCACGTAGTACGTTCTGAGCATCGCTATAATGTTCAACGTGTTGCTT
TGCAAAAGCACTTGCATTCAACAATAGTGGTGCTGCAGCGCCTGCTGCTA
TTGCGTTGCATCATTGCAAGCGACATAGCATGACTTGTGGCGAATCAGTG
ATGAATCAGTGATGAGTCAAGACACATCTGCACGGCAGCACGTGCTTGGT
GGTTTTCGAGGCAACATAGCGAGCTGCCCCATGTAGCCTGTCACTGTTCA
CCCCCAGAGGTAGATACCAAGGTGAACAATACAGAAGGCCGACGCCAGCC
ATGTGCTTTTGATAGTGAATGCGTTGAAGTGCCCCTGACAAATGTAACTG
CCGTAACCGTGCAACTATTATATGCTTCAACAGCTTTCAATGCTGTTGGA
TGAACGCTCTGCCACTGGATTATAACACAACAAGCGGAACGCCCGCTGGC
CCAGGGAAGTGAGGTTTGCTCACCCGCTCCACTCACACGGCTACTCCTCA
TTCAATACGCTGGATTTGGGGAATGGACTTCGCCAACAAGTGGGGCGTGG
CCCGGTGAACATTATTGGGCTCTTTGAGAAGACACTGCTGTGCGCGTTCA
AGTGTGGCTGTAGCAGTACCCTTTTTGCCCATGACTCAGTGCGCCAGGGT
CCATCGCCGCAACCAACCAACAGCGGACCTTCTCGCATTTCACCTGGAAT
ACGTGTTCACCTGTTCCCCTTGTTTGACCCCCATTCGCCTTATTCGCCTT
CGCCAGCAACCTGGATCCACTCATTATGCTATCGGCGCATCCATGCGGGT
TCAGGGCCATCGTCAAGGTACGCAGTTGTACTGCATCCATGCGCAGTTAC
CTCAACGTAACTGCGCAATTCCACCAACCAACTCAACTGTCACTAACGCG
CGCGCAGTTACACTAATGCAACTGTGAGGTATGCAGTTGCACCGATGTAA
CTGCAGCTCAGTTGCATGCGTGATGGCCATGATGTGCAGCACACACAACG
TGGTATGCGAACGGTGCATAGTTGGCCACTGCAGTCTGCTAGACACCAGC
AGCCTCGGAAGGGCCCTTCCGCTGGTGCATCCTCCAATCACCCCGTTTTC
CCGCGTGGTCACCGTCGCGCCTTTCTCAAAATAGGACCGAACGGTGCTGC
AAGGTTCATGCATGCGTAATAGCCCTCGGTGTGGTACATGTATGTAAGCG
TGCTCTGTACATGTGTCACTGCGTTGCGACCCCGGAAGGGCCCTTCCGCT
GGTTCACCCTGGGATCACCTTGTTCCCATATGGTCACCTTCGTCTTTCTC
AAATTAGGACCGAACTCCGCTGCAAGGTCCGCCCATGCGTACTAGCTCTG
GGTACGGTATGTAGGCAAGTACGCGTGTCGCCGCATGGCAACCCCGCCCC
CCGCAGCAGACGCGCCACGCGCTGCTGCCCTCTACTTCATGCCGCCTTCG
CCACTGCACGGGACCTCAATATTGTGACAGCGCCGCGTAAACCCTCGGGT
TGATGTGCGATGGCGCCGCAGACTGGAAAGTAGGCACGTCACTCCACTTC
TGAACTTGAAGTTCAGGCCACACATCGGTGGGCCGCCAGGCCACGCTGGA
GTGAAGTTAGGGCACATCACTCCCCCCTGTTGCACTTGAAGTTCAGACCA
TGCATCAACGCGCTCCCTCCAGCATTGCCGGGCGCTGAGACGCCGCTTGC
CGTGACTCGCGCAGCACTCCATCTTTGCTGTGCCATACCTGGGGCGGCTG
GCGTAAATTAGGCCCGTCACTTCACTGCTGCACTTGAAGTTCAGACTGTG
CATCAAACGCTCCTCCATCGCCGCCGCGCGCTGGGACGCCACTTGCCGTG
ACTCGTGCAGCACTCCATCTTTGCTGTGCCGTACCTGGGGTGGCTGGCGA
TGGCGTTTGGGTGCGTGCCCATCGACAGGAGCCGGCGGGACGCTGCGGTG
GCATCGATGACTGCGGCAGGGGAGGAGTGCCAAAGGTACAGTATCTCACG
CACATGTGCTGAAGGTTCAGGCTCTTACGCACGTTGGATACCGTCAATGG
TGCTCTCTGCATCATGTGTAAACAAGTGCACGTGCAGCGGCCGAGGAGGA
GTGCCAAAGGTAGAAGAGGCTGTCGCGCGCATTGGACATTGTGTATGAAA
ACGAATCAAAAGATCGTAGAGCTTCAGGTGACAAGGTGTGGTTAGCCGTC
AAATAGAACGCTCGTGTATGGCGGTGGTGCACTCTCTCTATATATCTGTG
TTTGGCTCGCGGCCGATTGCCGCAGCAGCAGCGACCACAGTCATTGGTGG
AAAGCATTTGCGGCTAACCACACCTTGTCACCTAGAGCTCTACGATCTTC
TGATTCGTTGCCTTTGGACATCATGTATGGTGGTGCTCTCTACATGTATA
TAGAAGTACATGAACGCATGTGTGCAGCATATATAGAAGTACATAAACGC
ATGTGTGCAGCGAGCGCCACTTGCTGGCTGCTTCGCTAGCCGTGTGGTGC
GGATGAGCTGTACGTAGGGTGCGGAGGTACAACGTCGTGACGGGTTATGA
ACTTGAGTGCCACCTCCCACCGCAAGTCGTTGCATGCGTCGTTGTTGAAG
TACCTGTATGCCGTGCGTATCAGTGCCCGCTCGCTGGCATCGGCGGCAGG
CATCGCACTGTGCCACGCTCTCGTGTGCAACGCATGCACACACCTGGCAT
CTACAGCAGTACTGTAGACCGTGCCGTGCTTAAATGAAATGGAAGCACAT
GCTATGCTCAACTGCATTTCAAGCACCTCCGCAGCGACACACGGACTCCA
CATCACACCGGCCGGTACGCCTTTCTTCACACGCCGTCGCGCACGCACAT
AGGCCGTGTTATCGATGTACTCGTGTTTTCATGAGAAAGTGGCACCCCCG
CACACGCGCGCGCCGCAAGGTCTCTCGGGCAGTGACACGGACTCCAAATC
AAACCGGCCGGTACGCCTCTCTTCACTCGCACTCACATGCATACCCCCCC
CCCCCTCCCCCCCCCCCCCCGCGCGCCTCTGTGGACTAGGACTAGGGTTA
GAACGAACCCTAACCCAAAACGCCTCTCTTCACACCCACTCACATGCATA
CCTACCCCCACCGCACGCGCGCGCCCCCCGCAGGGTGGGCTACTCGCTCG
CGGTCTCGCCGGAGGGGACGCGCAGCCGCACGGGGCAGCTGCGGCCCTTC
AAGAAGGGCGCCTTCCACCTCGCGCAGCAGCTGCGGTGGCCCATGCTGCC
GCTCACCATCCACGGGGCATTTGCGCTGTGGCCGCCGCGCGCCGCGCGCG
CAGGGGCGCTGTACGCGCGGCCGGGGACTGTGGGCGTGCGCTACCACGCG
CTCATACGCGTGGGGGAGGAGGTACAGTCTGTACAGAGTGTACAAAAGTG
TTGAAGTAGGCAGTACTTGAAGTATAAAGCGCAGGGGCGCTGTACGCGCG
GCCAGGGACCGTGGGCGTGCGCTACCACGCGCTCATACGCGTGGGGGAGG
AGGTACGGGCGTCGTTAATGAGGTTGAAGTAGGCAATTGCAGTCATTGAA
AGTATTGAAGTAGGCAGTACTTCAAGTATAAAGCGCCGGCGCGCTGTACG
CGCGGCCCGGGGCCGTGGGCCTTCGCTACCACGCACTCATACGCGTGGGG
GGCGGAGGTACAGTCTGTACAGATTGTACAAAAGTGTTGAAGTAGGCAGT
ACTTGAAGTATAAAGCACCGGCGCACTGTACGCGGCCCGAAATCGTGGGC
GTCCGTCACCATTGCTCATGCGCATGGGGGAGGAGGTACACGAGATGTTG
AGAGTATGCAAGTCGGCAATTACAGGGGTCGTGTTGGAAGTATCGAAGTA
GGGTATGACGCAGCTGCGTGCCTGCAAGCGGGGCCCGGGACCGTGGGCGT
GCGGTACCACGCGCTTATACGCGTGTGGGAGGAGTACAGGAGTTGCTGAA
AGTCTTAAGTAGGCAATTGCAGTTGCAGTCATTGAAAGTGTTGTAGTAGG
CAATGCTTCAAGTTTAAAGCGCGGGCGCACTGTACGCACGGCCCGGTACC
GTGGGCATGCGCTACCACGCGCTCATTCGCGTGGAGGAGGAGGTACACGA
GTTGTTGACAAGTATTCAAGTAGGCAATTACAGTCTTGAAAGTATTGAAG
TAGGCAAGTAAAGCGCCGGCGCGCTGTACGCGCGGCCTGGGACTGTGGGT
TTTCGCTACCACGCACTCATTCGCCTGGGAGAGGAGGTGCAGGAGTTGTT
GGAGGTGTTGAAGTAGGTGATGCTTCAAGTATAAAATGGCTGCGTGGCTG
TACGTGCGACCCTGAGCTGTGTCCGCTACTGCGCACCCGTACGCACAGAG
GAGGGAATAGAGTTGTCTGAATTTCTGTTGAGGTAGGTAATGCTTTTAGT
AGCCATGTGGGTGTACGCGCGGCATAGGACCGGGCGTCCGTTCCGTGGGC
GTCAGTTGCCATTCATTGTTCGTGGGGGGAAAGAGGCTACTTGGGTACTT
TCACTACTTCTTTTTGAAGTAGATGTGTTGACGCCCCGCAATGTGGGCGT
CCGCAACCAGATGGCGGGGGACAATCTACATGATCCTCATTTGCCCACCT
CGTGTCTGAAACGGGCTGATGCTGACAGTGACGCGGTGCTATCAATGTTT
CTCTGTATCCGACCAGCACTGTCCTGCCGTGGCTTTCTAGCAGGCTGTGG
TTCACGCACAGTTGCTGCACCGCTGTAACAGCAGTCTCAGTGTCCCTACA
GTAGCCACGACCCCCCCCCCCCCCCCCCTCGAAGGGCGGCAGCGAGCTGA
TGCTCATCCGCTCGATGCTCACGTGCCCCTTCGCCCTTTCCCTCTCAAAC
GCAATGAATAACTTCAACCACGATACTTCCTGCCGCGCGGCACCCCTCCA
AGGGCAGCAACAAGGTGATCCTCATCCTCTCCATGCTCACATGACCCCCC
CCCCCACCCACACTCCCTCAAAGCTGCAGCGACTAACTTCAATAACATAC
TCCCTGCCGCGCAGCCATCCGACGCCAGCTCGCAGTCCGCAGCAAGCGAG
GAGCAGCTCGAGCACGACCGCTGCGTTGCTGCAGCAGCGCTCAGGGAGTC
CCTCCTGGGGGGCCTGGAGAACCCCCCAAAGGGGGTCAGCACGTGCGCGG
GGGTCATGCAGTGGGTGGTCACGTACGCCGCCGCCGCGTGCACGTACTGG
CTCATTGCAAGCGCCGTCCTGGCGGCGGCGCCCAGCGCGACGGCGGCGCT
GGGTCTGAGCGGCGGGCAGGTGCGTCGCCGTTTGCATTGCCAAATGCATG
TTGAAGTTGCTGTATTGGTGATGCACGCACTGGCTTGTTGTCAGCGGTGT
CATGGCAGCAGCGGCGCCCAGCGCGACGGCGGCGCTGGGGCTGAGCGGCG
GGCAGGTGCGTCGCCGGTTTGCTTTGTTCAAATGCATGTTGAAGTTCCGT
GTTGGTGGGAACTGGCTTGTTGTAAGCACTATCATGGCGGCGGCGCTGCG
GCTGAGCGGCGGGCAGGTGCGTCGCCGTTTGCATCTTCAAATGCATGTTG
AAGTTGCTGTCTTGGTGGTGTGCATGAGCTGGCTGATTGCGAGCGGTGTC
ATGGCAGCAGCGTGGCCAGCGCGCCGGCAACGCTGGGGCTGAGCGGTGGG
CAGGTGCGTCAGCGCTCGCCGTCGTTTGCATTCCTCAAATGCATGTTGAA
GTTGATGCTGGTGGGACGCTCCTGCCCTGGACATGATGCGTTCGCTGGGC
AGCGGGCAGGTGCATCAGCGCTCGCCATCCGCATCTTCATGATGACGACC
AGCGTGCCAGCGGCACTTGGGATGAGCATCAGACACGTCTGCGATTGCCA
CTTCCATCATTCTGCTGTGCTGAACAAGCACTGAGGTGTGTTGGTGTCAC
GACTGCGGTAGCTCCTGTTTGGGCCATGCCTGGTGGCAACTGCCGTTATT
GAGGCAGCGCCCAGCGCAACAACGTCGAGTGCCAGGGTCGTTGGTGTAAG
CGCATCGTTCTTGGCACTTGTTTGTGAGGTTTGCATGCGTGTGTGAGCGC
TTGTGGCGAATGTATGCAACGGTTGAGAATCTTGCGTCGCGTGTGCTTGT
CGCTGAGAGACTCGCATCGTTTCCGATCGTCAACGCAGCGCGCGACAGGT
TGCCTCGTGACACAGCTCCACTGGTCTACAGGTCGGACGTGTGAAATGAT
TCTCGCTTCCATTGAAGCTGCGCAAAAGACTGGCTGCAATGGCCGTCCGG
CGCAGCTTGCGTGTGGCCTTATTGCGCAGCATAGAAGTACTATGAAGTAT
GTACATTTGAAAACGAATTCAACAACGGCGTCCACAAGAGCATACTTAGA
AATATATTGTAACCAGAAATCCGCTTCATCTCAGCGGTCACGTTTCTCAT
TCAAGTTGCACCGTCCATGCCCTTGCGCGCTGCGCTGCACGCAGGCGGCG
GCGCTGTGGCTGCTGTACACGGCAAGCGTGACTATCATGGTCTATGTTGG
CAACTGCGGGATACCGGGACGCAAGCGCACCAGCAAGGCGCATCGGAGCT
GATCTCAGACACTGTCGCTGTGGTGGACCGCCTCTCTTCTTTGTACGATT
TTGATGATAG
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Coding sequence (CDS) from alignment at Contig_73:9211..16770-

>mRNA_12837 ID=mRNA_12837|Name=jgi.p|Trimin1|350802|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1257bp|location=Sequence derived from alignment at Contig_73:9211..16770- (Tribonema minus UTEX_B_3156 )
ATGAGCGTGGCTGTCCCGCTGGTGCTGCTCACCAAGCTGGAGTCAGAGAT
CATAGCCCTAGGCCTAGGGCCTCCTTTTCCACGGCTGAGCACTGGTGCGA
AGCGCATCCTCGCTCAGTGGATGCTGCTGGTGACGGGGGTGCGGGTGCGG
GTGGAGGGGAGGGGGGGGGAGTTCAAGGAGCGGTTTCAAAAGCCGGCGCT
GATCATGTTCACGCATGCCAGCAACCTGGATCCACTCATTATGCTATCGG
CGCATCCATGCGGGTTCAGGGCCATCGTCAAGCACTCCATCTTTGCTGTG
CCGTACCTGGGGTGGCTGGCGATGGCGTTTGGGTGCGTGCCCATCGACAG
GAGCCGGCGGGACGCTGCGGTGGCATCGATGACTGCGGCAGGGGAGGAGT
GCCAAAGGGTGGGCTACTCGCTCGCGGTCTCGCCGGAGGGGACGCGCAGC
CGCACGGGGCAGCTGCGGCCCTTCAAGAAGGGCGCCTTCCACCTCGCGCA
GCAGCTGCGGTGGCCCATGCTGCCGCTCACCATCCACGGGGCATTTGCGC
TGTGGCCGCCGCGCGCCGCGCGCGCAGGGGCGCTGTACGCGCGGCCGGGG
ACTGTGGGCGTGCGCTACCACGCGCTCATACGCGTGGGGGAGGAGGGACC
GTGGGCGTGCGCTACCACGCGCTCATACGCGTGGGGGAGGAGCGCCGGCG
CGCTGTACGCGCGGCCCGGGGCCGTGGGCCTTCGCTACCACGCACTCATA
CGCGTGGGGGGCGGAGCGGGGCCCGGGACCGTGGGCGTGCGGTACCACGC
GCTTATACGCGTGTGGGAGGACGCGGGCGCACTGTACGCACGGCCCGGTA
CCGTGGGCATGCGCTACCACGCGCTCATTCGCGTGGAGGAGGAGCCATCC
GACGCCAGCTCGCAGTCCGCAGCAAGCGAGGAGCAGCTCGAGCACGACCG
CTGCGTTGCTGCAGCAGCGCTCAGGGAGTCCCTCCTGGGGGGCCTGGAGA
ACCCCCCAAAGGGGGTCAGCACGTGCGCGGGGGTCATGCAGTGGGTGGTC
ACGTACGCCGCCGCCGCGTGCACGTACTGGCTCATTGCAAGCGCCGTCCT
GGCGGCGGCGCCCAGCGCGACGGCGGCGCTGGGTCTGAGCGGCGGGCAGG
CGGCGGCGCTGTGGCTGCTGTACACGGCAAGCGTGACTATCATGGTCTAT
GTTGGCAACTGCGGGATACCGGGACGCAAGCGCACCAGCAAGGCGCATCG
GAGCTGA
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