mRNA_12801 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172122
Unique NamemRNA_12801
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A835YIF7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF7_9STRA)

HSP 1 Score: 471 bits (1211), Expect = 6.480e-168
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
Query:    1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR 696
            MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR
Sbjct:    1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR 232          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A835YP31_9STRA (Nucleotide-diphospho-sugar transferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP31_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.120e-120
Identity = 163/220 (74.09%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNT 660
            M+AV + VHV VP YNAE + VE VES LRQ++AR RVW Y+DGSTD T ALL +KF+++ RV +L+NK NLGPAQTKWLGFQAI KEA PNDIV+VLDGDD+L++D+ALA+VH EYL +KCWFTYGSYVG FS+EV+ALDA+TH +FRAAAWRYGHPR+FKAFLI HLT+ADF+ ADGTWLTKGTDRGFILRFLELSGP+ I++IR P+YFYRKHA NT
Sbjct:    1 MYAVAHTVHVLVPAYNAEGYVVEGVESVLRQSHARVRVWAYNDGSTDNTGALLNIKFKADPRVVLLSNKVNLGPAQTKWLGFQAIYKEALPNDIVVVLDGDDHLLSDDALAVVHGEYLAKKCWFTYGSYVGAFSREVRALDADTHLDFRAAAWRYGHPRSFKAFLIGHLTEADFKHADGTWLTKGTDRGFILRFLELSGPARISFIRVPIYFYRKHASNT 220          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A5J6VJ98_9VIRU (Glycosyltransferase family 2 n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJ98_9VIRU)

HSP 1 Score: 167 bits (424), Expect = 5.650e-44
Identity = 85/212 (40.09%), Postives = 128/212 (60.38%), Query Frame = 1
Query:   22 VHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARN 657
            V++ VP+YN +AF  E V+S L+Q Y +    +YDDGSTD ++ +     +++SR   L NK N GPA +K+ G + I  +++ +DI++++DGDDYL+   AL I+   Y   KCW TYGSY G +S      D   + ++R  +WRYGHPR+ K  L+ +  + DF+  +G WL K TDR F+   +E SG   I +I   +Y+YR H  N
Sbjct: 1112 VYILVPIYNYQAFLNECVDSILKQKYIKWIAVLYDDGSTDNSSNICSKYVKNDSRFIYLGNKTNYGPACSKFRGIEYIRGKSSGDDIMVIVDGDDYLLGSNALNIILQTYENTKCWMTYGSYRGKWSNNQ---DFPPNTDYRQNSWRYGHPRSCKCHLLKYFKEQDFK-INGKWLKKATDRPFVYNLMEWSGRDRIQFITKQIYYYRIHNNN 1319          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A7S2RZR3_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZR3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.400e-35
Identity = 81/231 (35.06%), Postives = 121/231 (52.38%), Query Frame = 1
Query:   25 HVFVPLYNAEAFAVEA-VESALRQTYARARVWVYDDGST----------------------DTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEA--TPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHK-NFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFY 639
            HV VP        ++  + S L Q Y+   VW+  DGS                       + T ++ +      + +  +   +  GPAQTK++GF+++   A  T ND +++LDGDDY  +DE+L+++ A+Y    CW ++GS VG +S++ KA      K   R   W + HPRTFK  L  ++  +DF+  DGTWL KGTDRGF+LR LELSG     +I + LY Y
Sbjct:   78 HVVVPFLKVPGKVLDKDLNSILTQNYSNKMVWIIKDGSMTEGDEDQLGVLTAFCGGELPGLEPTYSVHKPTNTYIACIRAVKEAKRGGPAQTKYVGFESVYNFALSTGNDTIVILDGDDYFSSDESLSVIDAKYKRNGCWCSHGSMVGKYSEQQKAHTLLNGKWQPRQIEWSFAHPRTFKVQLFKYMPVSDFKDQDGTWLKKGTDRGFVLRMLELSGFERSCFIDTVLYNY 308          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A6C0DSF9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSF9_9ZZZZ)

HSP 1 Score: 128 bits (321), Expect = 3.420e-30
Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   28 VFVPLYNA-EAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEA---TPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSV 669
            +FVP  +  E F + +++S + Q Y R  V + +DGS  T    +    R +   T+L  ++  GPA +KW     + +     T NDI +++DGDDYL T+ ALA V+  Y   KCW TYG+ VG F +    +   +  + R+  + Y HPRTFK  L    T+ DF+  +G WL K TD   +   +E++G     +I + LY Y +HA N++ +
Sbjct: 1100 IFVPYCDYFEQFIIRSLQSIVDQKYTRYEVIIVNDGSIYTRN--IHEFIRDKPYFTLLNFEKREGPAASKWRFLNYLQQNLHRYTMNDICMIVDGDDYLSTETALATVNRTYQDHKCWVTYGNCVGKFCERPYNVIPESWTDVRSNEFIYNHPRTFKLALATTFTEGDFKM-NGEWLVKMTDHPIMFNTIEMAGKQRTKFIETMLYSYEEHANNSYKL 1314          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A2E9V6Z8_9RHOB (Glyco_trans_2-like domain-containing protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2E9V6Z8_9RHOB)

HSP 1 Score: 101 bits (251), Expect = 2.390e-22
Identity = 61/215 (28.37%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV-------GPFSKEV--KALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645
            + +P YN E +    V+S   Q Y   +  + DD S+D +  +++ +     +  ++ N       +  +   + ++K A   D+++ LDGDD+L T   L  ++ +Y+   CW TYGSY+       G FSK++  + +++NT   +R + W   H RTFK  L   +   DF + DG +     D  F+   LE++GP   A+I+  LY Y +
Sbjct:   11 IVIPSYNNEKWIQMCVKSVKLQNYENYQCIIVDDNSSDRSVDIIKKEIEGNDKFILIENTERKLALRNIYESVE-LSKPAD-EDVIITLDGDDWLATKSTLQRLNKKYIESSCWLTYGSYIEYPSQRPGKFSKQIPKEIIESNT---YRDSEWMSSHMRTFKYKLWKRIKKEDFLEEDGRFCDGAWDMVFMFPMLEMAGPRS-AFIKDYLYVYNR 219          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A6C0ESP2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESP2_9ZZZZ)

HSP 1 Score: 101 bits (252), Expect = 3.270e-21
Identity = 67/212 (31.60%), Postives = 100/212 (47.17%), Query Frame = 1
Query:   58 FAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATP---NDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDA-NTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGS 681
            + ++ + S   Q Y    V +  DG       LL    + ++   +L  K N GPA +KW   + I         NDI+ +LDGDDYL  D A  I++  Y    CW T+G+ +G F       D   ++KN R   W Y H RT K  L+ +  + DF+  D  WL K TDR F+   +E SG     +I S +Y Y +H  N++   + +
Sbjct:   32 YIIKCLNSIENQNYKYYEVIIVVDGYVLDYNLLLDF-VKEKANYKLLVYKNNNGPAFSKWKFIEYIQTNINNYKYNDIIGILDGDDYLEND-AFHIINHTYNHHNCWVTFGNAIGKFCNFKVDYDILKSYKNIRKEKWLYNHIRTCKLGLLLNFKEDDFKMHD-KWLIKCTDRPFVYNIIEWSGFKKTRFINSIIYNYIEHDNNSYKTIDNN 240          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A3C0GE81_9FLAO (Glyco_trans_2-like domain-containing protein n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A3C0GE81_9FLAO)

HSP 1 Score: 101 bits (251), Expect = 4.960e-21
Identity = 70/221 (31.67%), Postives = 105/221 (47.51%), Query Frame = 1
Query:   25 HVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTN---KRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV-----------GPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645
            HV VP YNAE +  + +ES  +Q +      + DD STD T  ++    +++SR  ++ N   K  LG      + +    +E   ND+V++LDGDD+L + + L  +  EY+  +C+ TYGSYV             + KEV   +A     FR   WR  H RTF+  L   L   D +   G +     D+  +L  LEL+G     YI   L+ Y K
Sbjct:  298 HVVVPCYNAEQWVGKCIESLKKQLHCNFMCTLIDDMSTDNTRKVIEDYIKNDSRFFLVNNEDKKYALGN-----IAYALEREECENNDVVILLDGDDWLASSQTLCRLSDEYVDEECYLTYGSYVYHPIGRRGVEPSEYPKEVVENNA-----FRNDKWRASHLRTFRYELWKRLNHDDLKDDHGDYFKMAYDQAIMLPLLELAGERA-RYIPEVLHVYNK 507          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A2D6XFD1_9ARCH (Glyco_trans_2-like domain-containing protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D6XFD1_9ARCH)

HSP 1 Score: 100 bits (249), Expect = 9.340e-21
Identity = 75/215 (34.88%), Postives = 101/215 (46.98%), Query Frame = 1
Query:   28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATP---NDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV----GPFSKEVKALDANTHKN--FRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645
            V VP YNAE +  + VES  RQ +      + DD STDT     +    +++R  ++ N       +   LG  A A E T    ND+V++LDGDD+L +  AL+ +   Y+  +C  TYGSYV    G    E     A    N  FR   WR  H RTFK  L  HL   D +  DG +     D+  +L  LEL+G     YI   L+ Y K
Sbjct:  299 VIVPFYNAEKWVGKCVESLKRQQHRNFICTMIDDVSTDTGFETAKKSIGNDTRFRLIKNDE-----KRYALGNIAYALERTECHDNDVVILLDGDDWLASYRALSRLSEAYMDEECLLTYGSYVYHPMGTRGVEPSEYSAEVINNNGFRQDRWRASHLRTFKYGLWMHLNHDDLKDEDGNYYKMTYDQAIMLPLLELAGDRS-RYIPEILHVYNK 507          
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A3C0G296_9FLAO (Glyco_trans_2-like domain-containing protein n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A3C0G296_9FLAO)

HSP 1 Score: 96.3 bits (238), Expect = 3.060e-19
Identity = 64/210 (30.48%), Postives = 96/210 (45.71%), Query Frame = 1
Query:   28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV----GPFSKEVKALDANTHKN--FRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFY 639
            + VP YNAE +A   V+S   Q Y+    ++ DD STD+T    +     +SR TI+ N         K +    +     P D++++LDGDD+  T   L+ +   Y ++ C  TYGS+V    G   KE      +  KN  +R   WR  H +TFK  L   +   D +   G +     D+  +L  LE++G     YI   LY Y
Sbjct:  300 IIVPAYNAEKWAKTLVKSVKNQEYSNFECYIGDDISTDSTLKRFKKYVGDDSRFTIVANTEK--KYALKNIHDLILESNPKPEDVLVILDGDDWFTTRYVLSKLDQYYTSKDCNLTYGSFVECPLGEIGKEASEYPEDVVKNNAYRLDTWRASHLKTFKFKLWKKINVDDLKDTTGDFYEMSYDQAMMLPMLEMAGEKAF-YIPEALYVY 506          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIF7_9STRA6.480e-168100.00Nucleotide-diphospho-sugar transferase n=1 Tax=Tri... [more]
A0A835YP31_9STRA2.120e-12074.09Nucleotide-diphospho-sugar transferase (Fragment) ... [more]
A0A5J6VJ98_9VIRU5.650e-4440.09Glycosyltransferase family 2 n=1 Tax=Megaviridae e... [more]
A0A7S2RZR3_9STRA1.400e-3535.06Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A6C0DSF9_9ZZZZ3.420e-3033.94Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A2E9V6Z8_9RHOB2.390e-2228.37Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A6C0ESP2_9ZZZZ3.270e-2131.60Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A3C0GE81_9FLAO4.960e-2131.67Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A2D6XFD1_9ARCH9.340e-2134.88Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A3C0G296_9FLAO3.060e-1930.48Glyco_trans_2-like domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_89contigContig_89:236845..240936 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172122|e_gw1.89.54.1
DescriptionGlycosyltransferase like family 2
COG categoryM
Max annot lvl1224|Proteobacteria
EggNOG OGsCOG0463@1|root,COG0463@2|Bacteria,1QZZ4@1224|Proteobacteria
Evalue5.88e-22
Seed ortholog1121459.AQXE01000004_gene1764
Hectar predicted targeting categoryother localisation
TranscriptId172444
TrackFilteredModels1
ProteinId172122
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172122gene_12801Tribonema minus UTEX_B_3156 geneContig_89 236845..240936 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12801_1exon_12801_1Tribonema minus UTEX_B_3156 exonContig_89 236845..237011 +
exon_12801_2exon_12801_2Tribonema minus UTEX_B_3156 exonContig_89 237923..238016 +
exon_12801_3exon_12801_3Tribonema minus UTEX_B_3156 exonContig_89 239236..239460 +
exon_12801_4exon_12801_4Tribonema minus UTEX_B_3156 exonContig_89 240724..240936 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12801CDS_12801Tribonema minus UTEX_B_3156 CDSContig_89 236845..237011 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172122Trimin1|172122|e_gw1.89.54.1Tribonema minus UTEX_B_3156 polypeptideContig_89 236845..240936 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=699bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCGCCGTGGAGTACGCGGTGCACGTGTTCGTGCCGCTGTACAACGC
GGAGGCGTTCGCGGTGGAGGCGGTGGAGAGCGCGCTGCGGCAGACTTACG
CGCGCGCGCGCGTGTGGGTGTACGACGACGGCAGCACCGACACGACCGCG
GCGCTGCTGCGCATGAAGTTTCGCTCCGAATCGCGCGTGACCATCCTCAC
CAACAAGCGCAACTTGGGGCCGGCGCAGACGAAGTGGCTCGGCTTCCAGG
CAATCGCCAAGGAAGCGACGCCGAACGACATTGTGCTCGTCCTCGACGGC
GACGACTACCTCGTGACGGACGAGGCGCTCGCCATTGTGCACGCCGAGTA
CCTCACGCGCAAGTGCTGGTTTACGTACGGCTCGTACGTGGGGCCGTTCA
GCAAGGAGGTCAAGGCGCTCGACGCCAACACGCACAAGAACTTCAGGGCC
GCGGCGTGGCGGTACGGGCACCCGCGCACCTTCAAGGCCTTCCTCATCAA
CCACCTCACCGATGCAGACTTCCAGCAAGCGGACGGGACCTGGCTCACGA
AGGGGACGGATCGGGGGTTCATTCTGCGGTTCCTGGAACTGTCCGGACCG
TCGTGCATCGCGTACATACGCAGCCCGCTGTACTTCTACCGCAAGCACGC
GCGCAACACGTGGTCGGTGAGTGAAGGAAGCCGCGCGCGCGCACGCTGA
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protein sequence of jgi.p|Trimin1|172122

>Trimin1|172122|e_gw1.89.54.1 ID=Trimin1|172122|e_gw1.89.54.1|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp
MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTA
ALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDG
DDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRA
AAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGP
SCIAYIRSPLYFYRKHARNTWSVSEGSRARAR*
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mRNA from alignment at Contig_89:236845..240936+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4092bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )
ATGTTCGCCGTGGAGTACGCGGTGCACGTGTTCGTGCCGCTGTACAACGC GGAGGCGTTCGCGGTGGAGGCGGTGGAGAGCGCGCTGCGGCAGACTTACG CGCGCGCGCGCGTGTGGGTGTACGACGACGGCAGCACCGACACGACCGCG GCGCTGCTGCGCATGAAGTGAGTCAACGAGTCGTGAGTCATGAGTCAATT CGCCGGCCGCGGCGGCGGCGCCGCTGGCCGTCTGGGGCAGTGCTTGTTGT TGCTTCCTTAGTGGCGGCGCGTAGAAACGACGAGTAGAAGCGATCCCGCG CAGCACGTACAGCGCCCTCCACGGGATGTGCGCAGCGACCTATACTTCAA TTGTTCACTTCAATTTGAATGCCGTGACGCGATGCTCTGTGTGCTCAAAG CCAATTGACAGCGCCTTGCGCGAGGTGCACACAAACGTGCGCGGGGGCAT GCATCAGCTGGCAGCGCTCGAGCCCTTGCAGCCTGCTGGACCGAAAGCAA GTCGTTGAATGAGTCATGAGATGGCAGCAGCACATGAATCACCATTGGAG CTGATGGGGTGAGTTGCCGTACCGTACGCATTGTTTTTCCTGACAGAGCT GTGCACGCCCTATGCCAGGCTGCCTGCCGAGCGTCGGCGCAAGCGCGCCT GGAGGTTGAACAACTTCAACCGCTGCAGATGACCACAGGCTCTGCTGACG TGCCTCATGCTGATCAGCATGGCTCAACTGCCATGTGCCTGTTGTCTGGT GCGAAGAATTGCGTGATTTTGCCATTAACACAACAGCATTTATCTCAGCG CTAAGCTGAATGGTGATATTGCTCAATCTGCCGTTGCTCGCTGCGCTGCG CTGCGCGTCAGGTTCCGGTCGGAATCGCGCGTGACCATCCCCACCAACAA GCGCAACTTCAACCGCTGCAGTTAATGACCTCGTTGGCATGCCTGGTACT CACACAGCATGGCTCAACTGTTGCGCATATGTGCGTGATTTCGCCATGAA CACAACAGCAGTTATCTCATGGCTCAGTTGACTGCTGACAGCGCTCAACC CGCCGTTGCTCGCTGCGCTGCGCATCAGGTTTCGCTCCGAATCGCGCGTG ACCATCCTCACCAACAAGCGCAACTTGGGGCCGGCGCAGACGAAGTGGCT CGGCTTCCAGGCAATCGCCAAGGTAATAAAACTGCAGCGCAGTGAACATC CTGCATCAGAAATCGCTGCAGCGTAGCCTTTCACCACCCACAGCGCATTC TGTAACATCCGCTGCAATGTAGCCGTCATGCATGGCATTTTTCAGACTGC AGGCGATTGCCAAGGTACAGACAAGCAGCGCAGTGAGCACAACCACGACG ACTTGCATCGTCGCACAGCATCCAGTCAACTGGCTCGATCGGTCGTGCTG GTGCAGATGCGAACTGGCTTGTCAGGTCGATGCCTTTAGGGCAGTGAGCG CATACACGGTGACCTGCATCATTGCACAGCGTCAGTCAACTGGGTGGATC GGTGGTGCTGATGCAGATGCGGACTGGCCTGTCAGGCCGATGCCTGTAGC AGATGCCTGCTGTCGCAGGCAGGATTGTTTCTGCGTGCATGTGTCCGCGC ACACAGCATATGTGTGCATACGCTGCCTTCCAGGCGATTGCCAAGGTAAC GGAGCGTTCGCGCTGACTGCGAGCACTATGATCTGCATCACTGCAAAGCA TCAGCCGACTGGCTTGCCAGGCCAGTGCCGGTAGCAGGCACTGCCAGGCA GGATTGTTTCCGCATGCACGCGTCAGTATGTATGTACGCTGCCTCAGCGC TCTCCTTGTGCTCGGTCGAATCATCTTACTTTGAAGTATTTGTGATCTCT GGTCGTGCAACCTCCCCGGGTGCAGCGCCGCTGAGCATCACTGTGCTGCT AGCAGAACTGGCTGTGTTGGAGCGCAGGATGGCGGCAAACTCTCATAGTC AGGGCCAGAATAAGAAGTTGCTTGAGGGTTTGTGTAACTCGCCGCCGTAT TTGGAAAGAACCGGCGGGAACGGGGCATGCGTGTGCGGTGCTCATGTTGA AGTGACATCACACACAGCCATTGCGCCGCAACACCTTGCATAGCGGTTAC GCGCCCGCACGGCTGTTGCGAGTCACACAGTAGTAATGCACATGTGTCCA AGGCTCACAGAGAGCGTCGCGGCGTCGATTGTCCAGCAGGCAGAGTTGCC GAACAACATTGTGCTGGTGTCGCTACCTCGTGGCGGACGAGGCGCCCGCC TTGATGCTGCCTGAGCTACATAGAAGTACGTGGGTAGGCATGTATGCACG TGTGATCATGCAAATACATGCAAACTCTGCCCCGTGTGCGTCGCATGCAG TTCTAAACATTCCACATCGCCGAATAACTGTTGTCCTGCAGGAAGCGACG CCGAACGACATTGTGCTCGTCCTCGACGGCGACGACTACCTCGTGACGGA CGAGGCGCTCGCCATTGTGCACGCCGAGTACCTCACGCGCAAGTGCTGGT TTACGTACGGCTCGTACGTGGGGCCGTTCAGCAAGGAGGTCAAGGCGCTC GACGCCAACACGCACAAGAACTTCAGGGCCGCGGCGTGGCGGTACGGGCA CCCGCGCACCTTCAAGGTATGTACATACATATGTCTATACTTCAGTATAT AATATACACTTTATCACATATGGGGTTGACAGGTATAGGGGTGCACACCT GCGTGCTGAAGCCTGCCCCCCCCCCCCCCCCCCCCCCTTCCTGACAGCTT TTTAAACAGTGTGCACGGCAGCATGCTCGACACTGCATTCATTTGTGTCA TTGCTTACTAGCGGTGTAGGTATGTAATGCATGTAGGCATGTCGCATAGT GCTCAATGCTCTGCCAATTCCACGGGGTCGCTGCGCAACATGTGATTGTC GTGGCTCCACTACATGGCGGTCGCCAGCACTGCAAACCGGTTTATGGGCA CTTGCAGCTGTGCGTATGGGGAGATGCTCTAAGTTTTTGCATGTGGATGG TCGTGGGCATCGGCGCAGCGTCAAGAGCGGCAGGGGCCGCAGAGGTGTAG GTTTAGGGTTAGTCGCCAGTGCTGTGAACAGATGCATGAGGCGGCGCTTC AGTGCCACTGCATGAGAAAGTACTACGAAGCAATGCCTTTTGATGTAGGT GCACCGCGACGAGTGTGGCACCTGATGCGGGCTCGGGCATGTGCGCAGCT GCAAGGTACATGGGCTGTGTAGTGCTCTGTGAATATTCACATGGCGCAAT GATACTTCATTCGCTTTTGGATGCGATTGGGCCACAGCAGGGCGGTACGG GCACCCACTTAGCTGCAAGGTGCACACTTTGGAGAAGATTGCATTTACAC TCGCTTACAGTGACACAGGCCTTGCACAAGAACTGTGTCTGTTCGAAGGA GAGGTACCGCATACTGCCAAGCAGCGATGCCTGCCTACTGCGAGACTGGC GTGCACCAAGGCTGGCTGGATGGGTCAGCGTCTGCTGCATTTCTGTCATC GCTGACGTACCTGATTAGTCTGTTGAGCACTGCAGCCTTTCAGCTCCGAG GCGGCCAGATCAACACTTTCAGTGCTGACAAATCAACGGCGTGAGCGACG CAGAAGACGATGTCAACAAACCGGACGAATACCTACCGATCCCATTCATA CATACCCACACAGTGGTCCATGTACCTGCCCCATCACGCCACTACATGGG GCATCTCTACTTTCTCAAGAGATCTGGACACGGACCGATGGCACCACCCA CAACGTATCTGGAAATGCGTTGACCTGCCCCCAGGACACGTACACCGTGT TTCGAGTGCACCATTCAGGACCCCAAATCTGATGTTGGAGCGCCTATCCC CCCCCCCCCCCTCGCGTCTCTTGCCTCAGGCCTTCCTCATCAACCACCTC ACCGATGCAGACTTCCAGCAAGCGGACGGGACCTGGCTCACGAAGGGGAC GGATCGGGGGTTCATTCTGCGGTTCCTGGAACTGTCCGGACCGTCGTGCA TCGCGTACATACGCAGCCCGCTGTACTTCTACCGCAAGCACGCGCGCAAC ACGTGGTCGGTGAGTGAAGGAAGCCGCGCGCGCGCACGCTGA
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Coding sequence (CDS) from alignment at Contig_89:236845..240936+

>mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=699bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )
ATGTTCGCCGTGGAGTACGCGGTGCACGTGTTCGTGCCGCTGTACAACGC
GGAGGCGTTCGCGGTGGAGGCGGTGGAGAGCGCGCTGCGGCAGACTTACG
CGCGCGCGCGCGTGTGGGTGTACGACGACGGCAGCACCGACACGACCGCG
GCGCTGCTGCGCATGAAGTTTCGCTCCGAATCGCGCGTGACCATCCTCAC
CAACAAGCGCAACTTGGGGCCGGCGCAGACGAAGTGGCTCGGCTTCCAGG
CAATCGCCAAGGAAGCGACGCCGAACGACATTGTGCTCGTCCTCGACGGC
GACGACTACCTCGTGACGGACGAGGCGCTCGCCATTGTGCACGCCGAGTA
CCTCACGCGCAAGTGCTGGTTTACGTACGGCTCGTACGTGGGGCCGTTCA
GCAAGGAGGTCAAGGCGCTCGACGCCAACACGCACAAGAACTTCAGGGCC
GCGGCGTGGCGGTACGGGCACCCGCGCACCTTCAAGGCCTTCCTCATCAA
CCACCTCACCGATGCAGACTTCCAGCAAGCGGACGGGACCTGGCTCACGA
AGGGGACGGATCGGGGGTTCATTCTGCGGTTCCTGGAACTGTCCGGACCG
TCGTGCATCGCGTACATACGCAGCCCGCTGTACTTCTACCGCAAGCACGC
GCGCAACACGTGGTCGGTGAGTGAAGGAAGCCGCGCGCGCGCACGCTGA
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