mRNA_12801 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A835YIF7_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF7_9STRA) HSP 1 Score: 471 bits (1211), Expect = 6.480e-168 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1 Query: 1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR 696 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR Sbjct: 1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGSRARAR 232
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A835YP31_9STRA (Nucleotide-diphospho-sugar transferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP31_9STRA) HSP 1 Score: 350 bits (898), Expect = 2.120e-120 Identity = 163/220 (74.09%), Postives = 193/220 (87.73%), Query Frame = 1 Query: 1 MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNT 660 M+AV + VHV VP YNAE + VE VES LRQ++AR RVW Y+DGSTD T ALL +KF+++ RV +L+NK NLGPAQTKWLGFQAI KEA PNDIV+VLDGDD+L++D+ALA+VH EYL +KCWFTYGSYVG FS+EV+ALDA+TH +FRAAAWRYGHPR+FKAFLI HLT+ADF+ ADGTWLTKGTDRGFILRFLELSGP+ I++IR P+YFYRKHA NT Sbjct: 1 MYAVAHTVHVLVPAYNAEGYVVEGVESVLRQSHARVRVWAYNDGSTDNTGALLNIKFKADPRVVLLSNKVNLGPAQTKWLGFQAIYKEALPNDIVVVLDGDDHLLSDDALAVVHGEYLAKKCWFTYGSYVGAFSREVRALDADTHLDFRAAAWRYGHPRSFKAFLIGHLTEADFKHADGTWLTKGTDRGFILRFLELSGPARISFIRVPIYFYRKHASNT 220
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A5J6VJ98_9VIRU (Glycosyltransferase family 2 n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJ98_9VIRU) HSP 1 Score: 167 bits (424), Expect = 5.650e-44 Identity = 85/212 (40.09%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 22 VHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARN 657 V++ VP+YN +AF E V+S L+Q Y + +YDDGSTD ++ + +++SR L NK N GPA +K+ G + I +++ +DI++++DGDDYL+ AL I+ Y KCW TYGSY G +S D + ++R +WRYGHPR+ K L+ + + DF+ +G WL K TDR F+ +E SG I +I +Y+YR H N Sbjct: 1112 VYILVPIYNYQAFLNECVDSILKQKYIKWIAVLYDDGSTDNSSNICSKYVKNDSRFIYLGNKTNYGPACSKFRGIEYIRGKSSGDDIMVIVDGDDYLLGSNALNIILQTYENTKCWMTYGSYRGKWSNNQ---DFPPNTDYRQNSWRYGHPRSCKCHLLKYFKEQDFK-INGKWLKKATDRPFVYNLMEWSGRDRIQFITKQIYYYRIHNNN 1319
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A7S2RZR3_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZR3_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.400e-35 Identity = 81/231 (35.06%), Postives = 121/231 (52.38%), Query Frame = 1 Query: 25 HVFVPLYNAEAFAVEA-VESALRQTYARARVWVYDDGST----------------------DTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEA--TPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHK-NFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFY 639 HV VP ++ + S L Q Y+ VW+ DGS + T ++ + + + + + GPAQTK++GF+++ A T ND +++LDGDDY +DE+L+++ A+Y CW ++GS VG +S++ KA K R W + HPRTFK L ++ +DF+ DGTWL KGTDRGF+LR LELSG +I + LY Y Sbjct: 78 HVVVPFLKVPGKVLDKDLNSILTQNYSNKMVWIIKDGSMTEGDEDQLGVLTAFCGGELPGLEPTYSVHKPTNTYIACIRAVKEAKRGGPAQTKYVGFESVYNFALSTGNDTIVILDGDDYFSSDESLSVIDAKYKRNGCWCSHGSMVGKYSEQQKAHTLLNGKWQPRQIEWSFAHPRTFKVQLFKYMPVSDFKDQDGTWLKKGTDRGFVLRMLELSGFERSCFIDTVLYNY 308
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A6C0DSF9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSF9_9ZZZZ) HSP 1 Score: 128 bits (321), Expect = 3.420e-30 Identity = 74/218 (33.94%), Postives = 116/218 (53.21%), Query Frame = 1 Query: 28 VFVPLYNA-EAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEA---TPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSV 669 +FVP + E F + +++S + Q Y R V + +DGS T + R + T+L ++ GPA +KW + + T NDI +++DGDDYL T+ ALA V+ Y KCW TYG+ VG F + + + + R+ + Y HPRTFK L T+ DF+ +G WL K TD + +E++G +I + LY Y +HA N++ + Sbjct: 1100 IFVPYCDYFEQFIIRSLQSIVDQKYTRYEVIIVNDGSIYTRN--IHEFIRDKPYFTLLNFEKREGPAASKWRFLNYLQQNLHRYTMNDICMIVDGDDYLSTETALATVNRTYQDHKCWVTYGNCVGKFCERPYNVIPESWTDVRSNEFIYNHPRTFKLALATTFTEGDFKM-NGEWLVKMTDHPIMFNTIEMAGKQRTKFIETMLYSYEEHANNSYKL 1314
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A2E9V6Z8_9RHOB (Glyco_trans_2-like domain-containing protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2E9V6Z8_9RHOB) HSP 1 Score: 101 bits (251), Expect = 2.390e-22 Identity = 61/215 (28.37%), Postives = 107/215 (49.77%), Query Frame = 1 Query: 28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV-------GPFSKEV--KALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645 + +P YN E + V+S Q Y + + DD S+D + +++ + + ++ N + + + ++K A D+++ LDGDD+L T L ++ +Y+ CW TYGSY+ G FSK++ + +++NT +R + W H RTFK L + DF + DG + D F+ LE++GP A+I+ LY Y + Sbjct: 11 IVIPSYNNEKWIQMCVKSVKLQNYENYQCIIVDDNSSDRSVDIIKKEIEGNDKFILIENTERKLALRNIYESVE-LSKPAD-EDVIITLDGDDWLATKSTLQRLNKKYIESSCWLTYGSYIEYPSQRPGKFSKQIPKEIIESNT---YRDSEWMSSHMRTFKYKLWKRIKKEDFLEEDGRFCDGAWDMVFMFPMLEMAGPRS-AFIKDYLYVYNR 219
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A6C0ESP2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESP2_9ZZZZ) HSP 1 Score: 101 bits (252), Expect = 3.270e-21 Identity = 67/212 (31.60%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 58 FAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATP---NDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYVGPFSKEVKALDA-NTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRKHARNTWSVSEGS 681 + ++ + S Q Y V + DG LL + ++ +L K N GPA +KW + I NDI+ +LDGDDYL D A I++ Y CW T+G+ +G F D ++KN R W Y H RT K L+ + + DF+ D WL K TDR F+ +E SG +I S +Y Y +H N++ + + Sbjct: 32 YIIKCLNSIENQNYKYYEVIIVVDGYVLDYNLLLDF-VKEKANYKLLVYKNNNGPAFSKWKFIEYIQTNINNYKYNDIIGILDGDDYLEND-AFHIINHTYNHHNCWVTFGNAIGKFCNFKVDYDILKSYKNIRKEKWLYNHIRTCKLGLLLNFKEDDFKMHD-KWLIKCTDRPFVYNIIEWSGFKKTRFINSIIYNYIEHDNNSYKTIDNN 240
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A3C0GE81_9FLAO (Glyco_trans_2-like domain-containing protein n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A3C0GE81_9FLAO) HSP 1 Score: 101 bits (251), Expect = 4.960e-21 Identity = 70/221 (31.67%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 25 HVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTN---KRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV-----------GPFSKEVKALDANTHKNFRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645 HV VP YNAE + + +ES +Q + + DD STD T ++ +++SR ++ N K LG + + +E ND+V++LDGDD+L + + L + EY+ +C+ TYGSYV + KEV +A FR WR H RTF+ L L D + G + D+ +L LEL+G YI L+ Y K Sbjct: 298 HVVVPCYNAEQWVGKCIESLKKQLHCNFMCTLIDDMSTDNTRKVIEDYIKNDSRFFLVNNEDKKYALGN-----IAYALEREECENNDVVILLDGDDWLASSQTLCRLSDEYVDEECYLTYGSYVYHPIGRRGVEPSEYPKEVVENNA-----FRNDKWRASHLRTFRYELWKRLNHDDLKDDHGDYFKMAYDQAIMLPLLELAGERA-RYIPEVLHVYNK 507
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A2D6XFD1_9ARCH (Glyco_trans_2-like domain-containing protein n=1 Tax=Candidatus Pacearchaeota archaeon TaxID=2026773 RepID=A0A2D6XFD1_9ARCH) HSP 1 Score: 100 bits (249), Expect = 9.340e-21 Identity = 75/215 (34.88%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATP---NDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV----GPFSKEVKALDANTHKN--FRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFYRK 645 V VP YNAE + + VES RQ + + DD STDT + +++R ++ N + LG A A E T ND+V++LDGDD+L + AL+ + Y+ +C TYGSYV G E A N FR WR H RTFK L HL D + DG + D+ +L LEL+G YI L+ Y K Sbjct: 299 VIVPFYNAEKWVGKCVESLKRQQHRNFICTMIDDVSTDTGFETAKKSIGNDTRFRLIKNDE-----KRYALGNIAYALERTECHDNDVVILLDGDDWLASYRALSRLSEAYMDEECLLTYGSYVYHPMGTRGVEPSEYSAEVINNNGFRQDRWRASHLRTFKYGLWMHLNHDDLKDEDGNYYKMTYDQAIMLPLLELAGDRS-RYIPEILHVYNK 507
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Match: A0A3C0G296_9FLAO (Glyco_trans_2-like domain-containing protein n=1 Tax=Maribacter sp. TaxID=1897614 RepID=A0A3C0G296_9FLAO) HSP 1 Score: 96.3 bits (238), Expect = 3.060e-19 Identity = 64/210 (30.48%), Postives = 96/210 (45.71%), Query Frame = 1 Query: 28 VFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAALLRMKFRSESRVTILTNKRNLGPAQTKWLGFQAIAKEATPNDIVLVLDGDDYLVTDEALAIVHAEYLTRKCWFTYGSYV----GPFSKEVKALDANTHKN--FRAAAWRYGHPRTFKAFLINHLTDADFQQADGTWLTKGTDRGFILRFLELSGPSCIAYIRSPLYFY 639 + VP YNAE +A V+S Q Y+ ++ DD STD+T + +SR TI+ N K + + P D++++LDGDD+ T L+ + Y ++ C TYGS+V G KE + KN +R WR H +TFK L + D + G + D+ +L LE++G YI LY Y Sbjct: 300 IIVPAYNAEKWAKTLVKSVKNQEYSNFECYIGDDISTDSTLKRFKKYVGDDSRFTIVANTEK--KYALKNIHDLILESNPKPEDVLVILDGDDWFTTRYVLSKLDQYYTSKDCNLTYGSFVECPLGEIGKEASEYPEDVVKNNAYRLDTWRASHLKTFKFKLWKKINVDDLKDTTGDFYEMSYDQAMMLPMLEMAGEKAF-YIPEALYVY 506 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172122 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=699bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTCGCCGTGGAGTACGCGGTGCACGTGTTCGTGCCGCTGTACAACGCback to top protein sequence of jgi.p|Trimin1|172122 >Trimin1|172122|e_gw1.89.54.1 ID=Trimin1|172122|e_gw1.89.54.1|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp MFAVEYAVHVFVPLYNAEAFAVEAVESALRQTYARARVWVYDDGSTDTTAback to top mRNA from alignment at Contig_89:236845..240936+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4092bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_89:236845..240936+ >mRNA_12801 ID=mRNA_12801|Name=jgi.p|Trimin1|172122|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=699bp|location=Sequence derived from alignment at Contig_89:236845..240936+ (Tribonema minus UTEX_B_3156 )back to top |