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Homology
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A835ZFT9_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT9_9STRA) HSP 1 Score: 1337 bits (3460), Expect = 0.000e+0 Identity = 1000/1000 (100.00%), Postives = 1000/1000 (100.00%), Query Frame = 1
Query: 1 MEGKAAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRARFAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIEYDTTIVEDEVEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEMVDMIWGKARGRVDAGQRGALLGEAPRVRXXXXXXXXLVVTLQQGATAAAXXXXXXXXXXXXXAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANXXXXXXXXXXXXXXXXXXXAQATAAQAQALPKARSKLFRGGEPEVLMPEARPAGLSTGGLSAATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRLNVPVPPASREVQWGTQAGRAQEKSTEIFHESIGKFAPSAAAAAKLPLLHGVGEGAPAAVTVGAGLVQRNGAXXXXXXXXXXXXAPPLDIEVAVKPPLDLFKRIFEPDSDSEAEXXAAPPAGPPAMRTVKGPAMPPLPXXXXXXXXXXXAALRPEWAVESAAKAQRYGASSSEXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXSEXXSGRKAERRGDRRDERXAXXXXXXXXXXXXXXXXXXXXXXXGRGVSRRADXXXXXXXXXXXXXXXRKDRKKSRHK 3000
MEGKAAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRARFAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIEYDTTIVEDEVEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEMVDMIWGKARGRVDAGQRGALLGEAPRVRXXXXXXXXLVVTLQQGATAAAXXXXXXXXXXXXXAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANXXXXXXXXXXXXXXXXXXXAQATAAQAQALPKARSKLFRGGEPEVLMPEARPAGLSTGGLSAATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRLNVPVPPASREVQWGTQAGRAQEKSTEIFHESIGKFAPSAAAAAKLPLLHGVGEGAPAAVTVGAGLVQRNGAXXXXXXXXXXXXAPPLDIEVAVKPPLDLFKRIFEPDSDSEAEXXAAPPAGPPAMRTVKGPAMPPLPXXXXXXXXXXXAALRPEWAVESAAKAQRYGASSSEXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXSEXXSGRKAERRGDRRDERXAXXXXXXXXXXXXXXXXXXXXXXXGRGVSRRADXXXXXXXXXXXXXXXRKDRKKSRHK
Sbjct: 1 MEGKAAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRARFAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIEYDTTIVEDEVEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEMVDMIWGKARGRVDAGQRGALLGEAPRVRXXXXXXXXLVVTLQQGATAAAXXXXXXXXXXXXXAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANXXXXXXXXXXXXXXXXXXXAQATAAQAQALPKARSKLFRGGEPEVLMPEARPAGLSTGGLSAATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRLNVPVPPASREVQWGTQAGRAQEKSTEIFHESIGKFAPSAAAAAKLPLLHGVGEGAPAAVTVGAGLVQRNGAXXXXXXXXXXXXAPPLDIEVAVKPPLDLFKRIFEPDSDSEAEXXAAPPAGPPAMRTVKGPAMPPLPXXXXXXXXXXXAALRPEWAVESAAKAQRYGASSSEXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXSEXXSGRKAERRGDRRDERXAXXXXXXXXXXXXXXXXXXXXXXXGRGVSRRADXXXXXXXXXXXXXXXRKDRKKSRHK 1000
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A6H5KNJ4_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ4_9PHAE) HSP 1 Score: 250 bits (638), Expect = 3.180e-66 Identity = 270/835 (32.34%), Postives = 354/835 (42.40%), Query Frame = 1
Query: 13 AAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRARFAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIE-YDTTIVEDEVEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEM-VDMIWGKARGRVDAGQRGALLGEAPRVRXXXXXXXXLVVTLQQGATAAAXXXXXXXXXXXXXAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANXXXXXXXXXXXXXXXXXXXAQATAAQAQALPKARSKLFRGGEPE-----VLMPEARPAGL------STGGLS-AATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRLNVPVPP-ASREVQWGTQAGR---AQEKSTEIFHESIGKFAPSAAAA--AKLPLL------HGVGE-GAPAAVTVGAGLVQRNGAXXXXXXXXXXXXAPPLDIEVAVKPPLDLFKRIFEPDSDSEA 2436
A+KRP+RFHGAFTGGFSAG++N+VG+AEGW PS F SSRD+RA QRPEDFMD+EDGL LQ AK FDT+G TA AR+HAE + G AIPGPAP ELI P DP+G++LLR MGWREGQGVG+RVRR+ XX P E + + ED +Q +A L +TFAP NA + AK + +GVG++P+ APE GAA A A G R +VY D V+ A GV R +A RG HGF +DD +DD E YD + D G S+ A + + D E A RR+ARCPSD R PP GFVVA P +W PP PP+ F P +F + + LE+ +G A +DA R LLGE P + L +G A PAA K A+ T + +P TG + P G + T A + + EP+ ++ P +RPAGL ST L+ A+T V + E E L P R W P+PLLCKR NVPVP +S ++W T+ GR A+EK+ + KF P ++A ++PLL H +G A A+ +G +V NG +A +PP+DLFK IFE +S+ ++
Sbjct: 8 ASKRPDRFHGAFTGGFSAGFYNSVGSAEGWTPSAFSSSRDKRAAPKE--------------QRPEDFMDDEDGLFTEQLQ----------AKPAFDTLGSTADEVARKHAEMEAAGGAIPGPAPSELIIPVGDPMGKKLLRTMGWREGQGVGKRVRRKXXX-------PAPAEADDSP------------EDVLPEQARAGLGEKGRELLDKEG------------------------------LTFAPRNADVKMQHVLAKTNLHGVGHEPFKDAPEF----------GAARAGATGVR-SVYSTEDIVQHPMDAGAAGGMAA--GV-------------------------SRRSLAAAVVGRGSHGFVLDDGEDDVYESGLGKEAYDQALDADGGRAAAHAGLPGSAKAWALSGAADDDEDEPMLASRRYARCPSDGRLPPTGFVVAQRPDVHQKHWAPPIPPANFRPTIEFE-DDAKTPLELSTSQRYGGAH--LDASGRARLLGE-PSAQSSTSTPVAPPTVLDKGKA---------HLPDGSSALSFLSPAA--RKKVLEAANATKAPSRSSPDTGGAASKHQRPLGSMSQDNSSQQSEGLPFTLAAKFTSETPAASNS-----------DEPQDQVAGIIDPTSRPAGLTLRRPASTDTLNKASTATVSVDKSGRTEEE----LNPVRRTGDWIPTPLLCKRFNVPVPKTSSSSMEWTTKGGRPAGAEEKALG----PLTKFVPDSSAIDQPQIPLLKDLEQRHPIGNMSASASSGIGDVVVTDNG--------------------LAERPPIDLFKSIFESESEIDS 677
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: D7FJ14_ECTSI (RNA binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ14_ECTSI) HSP 1 Score: 176 bits (446), Expect = 8.200e-42 Identity = 175/489 (35.79%), Postives = 216/489 (44.17%), Query Frame = 1
Query: 82 VGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRPXXXXXXXXAPRTGETEGAAPKRPRLGPLQHLEDECQQQPQASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPAAVRARFAGGPVTFAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAAAGARPAVYRMSDAVRGXXXXXXXXXXRAPRGVPHERHXXXXXXXXXXXXXXXSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIE-YDTTIVEDEVEVGGSGGAALSSAVAAW--TKGVEVDAGEAAAALRRHARCPSDNRPPPVGFVVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEM-VDMIWGKARGRVDAGQRGALLGE 1536
VG+AEGW PS F SSRD+RA QRPEDFMD+EDGLL LQ AK FDT+G TA AR+HAE + G AIPGPAP ELI P DP+G++LLR MGWREGQGVG RVRR+ XXXXX E + + EDE +Q +A L +TFAP NA + AK + +GVG++P+ APE GAA A A G R +VY D V+ A GV R +A RG HGF +DD++DD E YD + D G LS + AW + + D E A RR+ARCPSD R PP GFVVA P + +W PP PP+ F P +F + + LE+ +G A +DA R LLGE
Sbjct: 51 VGSAEGWTPSTFSSSRDKRAAPKE--------------QRPEDFMDDEDGLLTEQLQ----------AKPAFDTLGSTADEVARKHAEMEATGGAIPGPAPSELIIPVGDPMGKKLLRTMGWREGQGVGNRVRRKXXXXXX-------AEADDSP------------EDELPEQARAGLGGKGRELLDKEG------------------------------LTFAPTNADVKMQSVLAKTNLHGVGHEPFKDAPEF----------GAARAGATGVR-SVYSTEDIVQHPMDAGAAGGIVA--GV-------------------------SRRSLAAAVVDRGSHGFVLDDDEDDVYESGLDKEAYDQALDADGGRAAAHAG--LSGSAKAWALSGAADDDEDEPLLASRRYARCPSDGRLPPTGFVVAQRPDVQQKHWAPPIPPANFRPTVEFE-DDAKTPLELSTSQRYGGAH--LDASGRARLLGE 423
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A7S2R5Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5Z0_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.890e-27 Identity = 77/154 (50.00%), Postives = 95/154 (61.69%), Query Frame = 1
Query: 31 RFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHA--EAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRRR 486
RFHGAFTGGFSAGY+NTVG+AEG+ P F SSR RA RPED MDEEDGLLG+ + + +++DT+G A A+ A EA SAIPGPAP+EL+ + IG+ LLR+MGWREGQG+G RVRR+
Sbjct: 34 RFHGAFTGGFSAGYYNTVGSAEGFTPGTFFSSRTSRAQVQQV--------------RPEDLMDEEDGLLGKDV----------FSTKEYDTLGAGAKQRAQASAAREAKESTSAIPGPAPMELMVVTDHSIGKALLRSMGWREGQGIGPRVRRK 163
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: K8YQK3_NANGC (G patch domain-containing protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQK3_NANGC) HSP 1 Score: 121 bits (304), Expect = 1.180e-26 Identity = 74/152 (48.68%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 31 RFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPL-ELIGPSSDPIGRRLLRAMGWREGQGVGRRVRR 483
RFHGAFTGGFSAGY+N+VG+ EGW PS F SSRD RA QRPEDFMDEEDGLLGR L + +DT+G ++ R+ E + GS+IPG + EL+ P+ IG++LL+ MGW+EG GVG R RR
Sbjct: 29 RFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSR------------QRPEDFMDEEDGLLGRDLH----------TQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRR 158
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A4D9D953_9STRA (G-patch domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D953_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.770e-25 Identity = 75/152 (49.34%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 31 RFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSAIPGPAPL-ELIGPSSDPIGRRLLRAMGWREGQGVGRRVRR 483
RFHGAFTGGFSAGY+N+VG+ EGW PS F SSRD RA QRPEDFMDEEDGLLGR LQ + +DT+G ++ R+ E + GS+IPG + EL+ P+ IG++LL+ MGW+EG GVG R RR
Sbjct: 21 RFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSG------------QRPEDFMDEEDGLLGRDLQ----------TQLPYDTLGVSSKQLLRKEVEKEAAGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRR 150
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A7S0IK53_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IK53_MICPS) HSP 1 Score: 114 bits (285), Expect = 9.730e-24 Identity = 73/169 (43.20%), Postives = 91/169 (53.85%), Query Frame = 1
Query: 1 MEGKAAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQHAEAISKGSA------------IPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGR 471
E A+ RFHGAFTGGFSAGYFNTVG+ EGW P +F SSR RA Q EDFMD+++ R+ A++D+DT G TAA Q A A S+ + IPGP P +L+ P+SDP+G RLLR MGWR G+G+GR
Sbjct: 70 QEATDAEGRRRFHGAFTGGFSAGYFNTVGSKEGWTPQQFTSSRANRAKVT---------------QTAEDFMDDDEREEMRSTALE--------ARDDYDTFG-TAAELRAQRAMAASEATGDGGRRKVHGPAIIPGPVPSDLVVPTSDPVGARLLRLMGWRRGKGIGR 214
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: Q5ZL89_CHICK (G-patch domain-containing protein n=7 Tax=Neognathae TaxID=8825 RepID=Q5ZL89_CHICK) HSP 1 Score: 111 bits (278), Expect = 1.490e-23 Identity = 75/161 (46.58%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 13 AAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAA-ARQHAEAISKGSAIPGPAPLE-LIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRP 489
A R +RFHGAFTGGFSAGYFNTVGT EGW PS F+SSR +RA PEDFMDEED L +DF + + ARQ A + +AIPG + + LIGPS IG LLR MGW+EGQG+G RV+R+P
Sbjct: 43 AKGRYQRFHGAFTGGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLG--------------PEDFMDEED------LSEFGIAPRDITTTDDFASKAKDRIKEKARQIAGVV---AAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIGPRVKRKP 180
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A7S0X8X9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8X9_9CHLO) HSP 1 Score: 110 bits (275), Expect = 2.880e-23 Identity = 72/171 (42.11%), Postives = 93/171 (54.39%), Query Frame = 1
Query: 31 RFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDG--LLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAAARQH---AEAISKGSA---------------IPGPAPLELIGPSSDPIGRRLLRAMGWREGQGVGRRVRR 483
RFHGAFTGGFSAGYFNTVG+ EGWAP+ F SSR+ RA Q DFMD+E+ L +L A++D+DT G +AA A++ AE +G A IPGP PL+L+ P DP+G RLL+ MGWR+G+G+G + R
Sbjct: 62 RFHGAFTGGFSAGYFNTVGSKEGWAPATFRSSREDRADAGARVA-----------QTATDFMDDEERAELTATSLA----------ARDDYDTFGASAAMRAQRQLAAAEGSGRGRAGPQGRGGGEDAPPAIIPGPVPLDLVVPVGDPVGARLLKLMGWRQGKGIGSKAAR 211
BLAST of jgi.p|Trimin1|351998 vs. uniprot
Match: A0A803Y9Z2_MELGA (G-patch domain-containing protein n=2 Tax=Phasianidae TaxID=9005 RepID=A0A803Y9Z2_MELGA) HSP 1 Score: 111 bits (278), Expect = 4.120e-23 Identity = 75/161 (46.58%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 13 AAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAXXXXXXXXXXXXXXXXXXQRPEDFMDEEDGLLGRTLQXXXXXXXXXXAKEDFDTMGQTAAAA-ARQHAEAISKGSAIPGPAPLE-LIGPSSDPIGRRLLRAMGWREGQGVGRRVRRRP 489
A R +RFHGAFTGGFSAGYFNTVGT EGW PS F+SSR +RA PEDFMDEED L +DF + + ARQ A + +AIPG + + LIGPS IG LLR MGW+EGQG+G RV+R+P
Sbjct: 43 AKGRYQRFHGAFTGGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLG--------------PEDFMDEED------LSEFGIAPKDITTTDDFASKAKDRIKEKARQIAGVV---AAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIGPRVKRKP 180
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | Trimin1|351998|estExt_Genemark1.C_Ctg_1050026 |
| BRITE | ko00000,ko00001,ko00002,ko03041 |
| KEGG Module | M00355 |
| KEGG Pathway | ko04011,map04011 |
| KEGG ko | ko:K13123,ko:K19842 |
| GOs | GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904 |
| Preferred name | GPATCH1 |
| Description | mRNA processing |
| COG category | S |
| Max annot lvl | 2759|Eukaryota |
| EggNOG OGs | KOG2138@1|root,KOG2138@2759|Eukaryota |
| Evalue | 1.03e-42 |
| Seed ortholog | 2880.D7FJ14 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | RNA binding protein, homologue of TOUGH |
| Ec32 ortholog | Ec-07_004810.1 |
| TranscriptId | 352320 |
| Track | FilteredModels1 |
| ProteinId | 351998 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12726 ID=mRNA_12726|Name=jgi.p|Trimin1|351998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3311bp|location=Sequence derived from alignment at Contig_105:168289..180597+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGGCAAGGCAGCCAAACGGCCTGAACGCTTTCATGGAGCCTTCAC CGGCGGCTTCAGCGCGGGCTACTTCAACACGGTGGGCACCGCGGAGGGGT GGGCGCCCTCCAAGTTCGTCTCATCGCGCGACAGGCGGGCGGGAGGGGGT GAGGATGGCGGTGCTGCGGCGGCGGCGGCGGCGCAGCAGCAGAGGCAGCG GCCGGAGGACTTCATGGACGAGGAGGACGGCCTGCTCGGCCGCACGCTGC AGGAGGACGGGCTGCTGGGCCGCACGCTGCAGGCAAAAGAGGACTTCGAC ACTATGGGCCAGACCGCTGCTGCCGCTGCCAGGCAGCACGCGGAGGCCAT CTCTAAGGGCAGTGCCATCCCCGGCCCCGCCCCCCTGGAGCTCATCGGCC CCTCTTCGGACCCCATCGGCAGGCGCCTGCTGCGCGCCATGGGCTGGCGC GAGGGGCAGGGGGTCGGGCGCCGCGTGCGCCGCCGCCCCGCAGCAGCAGC AGCGGCGGCAGCAGCGCCGCGCACCGGCGAGACTGAGGGCGCCGCGCCCA AGCGCCCGCGGCTTGGCCCACTTCAACATCTTGAAGATGAATGCCAGCAG CAGCCCCAGGCGTCGTTGGCGGCCGCTGGTGCCGGCGTCCCAGACGGGGA CAGCAGCCGGCGGCGGCGGCAGCGCGCAGAAACTCAACTTGAAGTTGAAG ATGAGGCGCCGGCCGCGGTGCGCGCGCGTTTCGCCGGCGGCCCGGTGACG TTCGCGCCCGACAACGCGGCGGCGGCGGTTGCGGTGCCGCCGGCCAAGGC GGACGCGTACGGCGTGGGCTACGACCCCTACGCGCATGCGCCGGAGCTCG CCGCGGCGCTGCGCGCGGGCAGCCGGCGCGGCGCCGCCGACGCCGCAGCA GCCGGCGCGCGCCCCGCCGTGTACCGCATGAGCGACGCGGTGCGCGGCGG CGGCGGCAGCGCGCAGCAGCAGCAACAGCGCGCGCCCCGCGGTGTTCCGC ATGAGCGACACGGCGCGCGCCCCGCCGTGTACCGCATGAGCGATGCGGTG CGCGGCAGCAGCAGAGCTCAACAGCGCAGCGGCGGCGGCAGCGCTCAGCA GCAGCGCGGCCTGCACGGCTTTGCCGTCGACGATGAGGACGACGACGCTG CGTTCGGCGACGCTGCCATCGAGTATGACACCACGATAGTTGAAGATGAA GTTGAAGTTGGAGGCAGCGGCGGCGCCGCGCTGTCGAGCGCCGTGGCGGC GTGGACAAAGGGAGTTGAGGTGGATGCTGGTGAGGCGGCGGCGGCGCTGC GGCGGCACGCGCGCTGCCCCTCTGACAACAGGCCCCCGCCCGTCGGTTTC GTTGTGGCATCGATCCCCCTTCAGAAGCCCACATACTGGACCCCCCCGGA ACCCCCTAGCACCTTTGTCCCCCGGCACCAGTTCTCACCGGAACAGGATC GCGCGCGGTTGGAGATGGTTGATATGATCTGGGGGAAGGCGCGGGGGCGC GTTGACGCAGGCCAGCGCGGAGCGCTGCTGGGCGAGGCGCCAAGAGTGCG CGGAGCGCTGCTGGGCGAGGCGCCGCTAGTGGTGACGCTCCAGCAAGGGG CGACAGCAGCAGCGGCGGCGGCGGCGGCGCCAGCGGCAGCACCGGCGGCG GCGGCGCGCGAAGTGTTCATGCCCGCCGCGTTCGACGGGCTCAAGTCAGC CATGGCGAGTCGTTTCACCGGCAGCTCCGGCACGGAGGCGCCACCCACTG GCCCCATCGGTCTCAGCATGCGAGCGCCAAAGGGACTGGCAAACTCTGGC ACGGAGGCGCCGCCCTCAGGCCCCATAGGCCTGAGCATGCGCGCGCCAAA GGCTCAGGCTACTGCGGCACAGGCGCAGGCGTTGCCGAAGGCGCGATCAA AACTGTTCAGGGGTGGTGAACCAGAGGTGCTCATGCCCGAGGCCAGGCCG GCAGGGCTCAGCACCGGCGGCCTGAGCGCTGCAACACCCAAGGTGGATGC AGAAGCAGAGGCGGCGAAGGAGCGAGAGCGCCTCGCAGCACTGGAGCCCA CTCGCACCGTCAGCGTCTGGCGCCCATCGCCGCTGCTATGCAAGAGGCTC AACGTGCCGGTTCCGCCGGCCTCGCGCGAGGTGCAGTGGGGGACGCAGGC TGGCCGCGCACAGGAAAAATCCACGGAAATTTTCCATGAAAGCATTGGCA AATTCGCCCCGTCCGCTGCCGCCGCCGCCAAGCTGCCGCTGCTGCACGGC GTTGGTGAAGGGGCACCGGCAGCGGTGACGGTTGGGGCGGGCCTGGTCCA GAGGAATGGCGCGGCGGCAGCGGCGGCGGGAGGGGCGCAGGAGCCCCCCG CGCCGCCGCTTGATATTGAAGTTGCGGTAAAGCCGCCGCTGGACCTGTTC AAGCGCATCTTCGAGCCCGACTCGGACAGCGAGGCGGAGGCGGAGGCGGC GCCGCCGGCGGGCCCGCCCGCGATGCGCACCGTGAAAGGGCCCGCCATGC CTCCGCTGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGGAGGCAGCAGCG CTCAGGCCAGAGTGGGCCGTCGAGAGCGCGGCGAAAGCGCAGCGGTACGG CGCGTCCTCCAGCGAATCAGAGTTAGAGTCTGACTCAGAGTCTGGCAAGT CGCGCACCAAGTCGGGTCCGGGGGAGCGGCGGCGCGAGCGAAGGCGCAGC AAGGAGCGATCCGGCAAAGAGCAGCGGCGGCGGCGCAGCAGCGGCAGCAG CAGCAAGAAGCACAAGTCGGAGTCCAAGTCGGGGCGGAAGGCGGAGCGCA GGGGGGACAGGCGCGACGAGCGTCGCGCCGATAAGAAGCGCAAGCACAAG AAGCGCTCTTCATCGCGGCGCAGCGATGGCGACGGCAGCGACGGCGGCGG CAGGGGGGTGTCGCGCCGCGCGGATGACGGCGGCGGCGGCAGCGACGGCG GCGGCGGCGGCGGGGGCAGTCGCAAGGACAGGAAGAAGAGTAGACACAAG TAGAGGCAGCCGAGCGCCCAGGTGTTGCCGTTGCGACGCATCTCTTGGGA CCCCTGTTGGTGTCGTACAGGTGCCGAGATGCGTTTTGGTGAGAACACCT GGGTGCACAGTACGATGCGCAGCAGTGGGCGCATGCCGAGCCCCAAGCAA GCGCGCCTTGCGGTGTGAGCGGCGCGTCTCAGTATGTAACGATGTGCGCG CAGAGTGCTATCATGTGTACATAGCAGTGTACAGTCGGCAGCTTGAGGCC ACCGGGCCTCCGGTGTCTGTGCTTTGCGCCATCACACGTGTCGTGAATAG ACACAGGTCAT back to topprotein sequence of jgi.p|Trimin1|351998 >Trimin1|351998|estExt_Genemark1.C_Ctg_1050026 ID=Trimin1|351998|estExt_Genemark1.C_Ctg_1050026|Name=jgi.p|Trimin1|351998|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1001bp
MEGKAAKRPERFHGAFTGGFSAGYFNTVGTAEGWAPSKFVSSRDRRAGGG EDGGAAAAAAAQQQRQRPEDFMDEEDGLLGRTLQEDGLLGRTLQAKEDFD TMGQTAAAAARQHAEAISKGSAIPGPAPLELIGPSSDPIGRRLLRAMGWR EGQGVGRRVRRRPAAAAAAAAAPRTGETEGAAPKRPRLGPLQHLEDECQQ QPQASLAAAGAGVPDGDSSRRRRQRAETQLEVEDEAPAAVRARFAGGPVT FAPDNAAAAVAVPPAKADAYGVGYDPYAHAPELAAALRAGSRRGAADAAA AGARPAVYRMSDAVRGGGGSAQQQQQRAPRGVPHERHGARPAVYRMSDAV RGSSRAQQRSGGGSAQQQRGLHGFAVDDEDDDAAFGDAAIEYDTTIVEDE VEVGGSGGAALSSAVAAWTKGVEVDAGEAAAALRRHARCPSDNRPPPVGF VVASIPLQKPTYWTPPEPPSTFVPRHQFSPEQDRARLEMVDMIWGKARGR VDAGQRGALLGEAPRVRGALLGEAPLVVTLQQGATAAAAAAAAPAAAPAA AAREVFMPAAFDGLKSAMASRFTGSSGTEAPPTGPIGLSMRAPKGLANSG TEAPPSGPIGLSMRAPKAQATAAQAQALPKARSKLFRGGEPEVLMPEARP AGLSTGGLSAATPKVDAEAEAAKERERLAALEPTRTVSVWRPSPLLCKRL NVPVPPASREVQWGTQAGRAQEKSTEIFHESIGKFAPSAAAAAKLPLLHG VGEGAPAAVTVGAGLVQRNGAAAAAAGGAQEPPAPPLDIEVAVKPPLDLF KRIFEPDSDSEAEAEAAPPAGPPAMRTVKGPAMPPLPPPQQQQQQQEAAA LRPEWAVESAAKAQRYGASSSESELESDSESGKSRTKSGPGERRRERRRS KERSGKEQRRRRSSGSSSKKHKSESKSGRKAERRGDRRDERRADKKRKHK KRSSSRRSDGDGSDGGGRGVSRRADDGGGGSDGGGGGGGSRKDRKKSRHK * back to topmRNA from alignment at Contig_105:168289..180597+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12726 ID=mRNA_12726|Name=jgi.p|Trimin1|351998|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12309bp|location=Sequence derived from alignment at Contig_105:168289..180597+ (Tribonema minus UTEX_B_3156 ) ATGGAGGGCAAGGCAGCCAAACGGCCTGAACGCTTTCATGGAGGTGGGTG
ATCTTTGCCTCGGTCTCCAAGTATTGAGCAAGCAGTCTGTCTCTAATGCG
CTATGTGGATGCTTGAGGTCGGAGCACTGAATCATCGAGCAACTTGCAGT
TGCAAACATGCACCAGAGTGTGTGTGTGTGAGTATATGCAGCATATTCTC
GGTGATTGCCTGGACAACGAGTGACTGTCTACCATCAGCTGCTTTGTGTG
TGGCGCTGGTGCAGCAACCCCCACGCGAGGTATGCTGGAGATGCACAGAC
ACTGCTTGCTCATGGCTGCCCGTAGGATTAGAAGTCTGTCGACATTGCAG
CACGAACTCGTCACCCGAATTGTGCTGCAGCGGTGCGCGGGCACATCTGC
CCGTGAAATAACTATGTGCCTGTATGAAGCACAATATCTTACTGCACACA
TCTATGGTAGACATTGCAACCTCATTTCCAATACTTCCACGACAAAACTT
TGGTTGAAGCGCTGTGCTCACTCGCCATCTTCAGCAGTGAGGGGGTGGTA
CATATGACGTGAGTGACATCGGAGTCGTCAGTCGTGCAGCGACGATCCTG
CTAGCCTGGCGGTGGCGTCTTGATGCGACAGTGCAACATGGCAAGTGCAG
CGATTGCAGATGTTCTCCGGGCGCCAACGGCCAGCGCATCACGCGCACGG
CGCTCGCTTTCGCCCGCGCCTCACCCCCTCGCGCGCCCGATGCGGTCGCG
CACAGGCGGTCTCTTTCAAAAACTTCAACGCAGACTACTTCAACGCGGTG
GGCACCGCGCCCTGGCACACCCCCTCCCCTCCCCAGGCCCTTTTTTCCCA
CTTCTAGTATTTACCATTCCAACTCAGCCTCGTAGGACGCGAACAGCGTC
ACTTCACCGCGCACCCGAGGCGGCGGCAGCAGCGCCTCCCCCACCTCCAT
GTGGCTCACCTCTACCTTGGCCCTGTAACCCACCTGTGCCCAATGCACTC
GCGTGCAGCCTTCACCGACGGCTTCAGCGCGGGCTACTTCAACACGGCGG
GCACTGTGCATGCCCCCCCCTCCCCTGCTAGTCCCCATTCTCAATATTCC
TCATTCCAACTCAGCCTCATAGGACGCGAACAATGCCTCCCTCACCTTCA
CGTTGCTCACCCCCACTTTGACCCCGTATCTCACCCTGTGCCCGCTGCAA
TCGCGCGCAGCCTTCACCGGCGGCTTCAGCGCGGGCTACTTCAACACGGT
GGGCACCGCGGAGGGGTGGGCGCCCTCCAAGTTCGTCTCATCGCGCGACA
GGCGGGCGGGAGGGGGTGAGGATGGCGGTGCTGCGGCGGCGGCGGCGGCG
CAGCAGCAGAGGCAGCGGCCGGAGGACTTCATGGACGAGGAGGACGGCCT
GCTCGGCCGCACGCTGCAGGTGTGTATGTACGTATGTGGATGGAAAATTT
GGCCATACCTACCTACCTACCCTTATCCTGAGCCCATTTGAGTTAGGTGT
AGGGGTATTGATAGGTAGGCGGCGAGGATGGTAGGCAGTGAGGATGGCGG
CGCTGCGGGAGGAGGACGGGCTGCTGGGCCGCACGCTGCAGGTATGTCTG
TATGTGGGTGTACGGCATGGCTATACCTACCCCTTGCGCCTGGGTCGATA
TATGTAGTCTGAAGTGTATAGTTTGTGGCGTATGCTCAACAGTGTGGGCG
CGCCGTCGCTGCCTGTGCCTGCCTAACTCAGCACATGTGTGTATAGTGAC
AATCTGTGCTGCAATGTATCTGGTGGACCTGCAGTGTTTGATGAACAGAA
GCAGCAACTTGAAGTTATCAGCGTCAAATGCTTTTGGCTTGATGAGTTGG
TCATGGGTCTTTGGTACCCGGCACCGACGTATGTGCACTGACTGTTGCTG
CTACTGCTGCTGCTGCTGGCTCTGCTGCTGCTGCTGGTTCTGCTGCTACT
GCTGCTGCGGCGGCTTCATCAGGCAAAAGAGGACTTCGACACTATGGGCC
AGACCGCTGCTGCCGCTGCCAGGTGACGCACCTTCATCAGATGCTCAGCA
GATGATGTGCTGTCACATCCAACCTCAATTTGTGTCAACTTCAAGTGCAA
AGTCAGGCAACACTCAACATCACTGCTTGCGTTGTGCTTGCGGCACACAG
AGTGTTGTTCGTGCTTCGGAGGACCTGAGAGCAGGTGGCATGGCACTCGC
TACGCACACTGCTGTAGGTCGTGTTGAAGTTGGTGCAGTGGACATACTTC
GAGTATCATCATGTTTTATACGACAGAAATCATGCTTTTCGAATGCATCA
GGGATGAGTGTCCCATGCACGTATACAATGCCAATATGTGAAAAGACAAG
GCAGCAGGGGGCATGAAGCATGTGATCAAAGCTTACATTCCCAGAACAAA
ACCAGCAAGTGGGTACGGCCATATCATGGTGACAGCACCAGCTCTCGTCC
GATCGCTGAAGTTAAGCACCCTTGAGCGGAGTTAGTACTACGGTGGGGGA
CCACGTGGGAAGCCTCCGTGCTGTACTCTTTTTTGTTCCCCCCTCTCTTT
AGCCTGGGAATGTAGCACACACATCCTTCTCTTTTCACCCGTTTTTGCTG
GGTGAGGAGGTCATGAACATAATTCATGTCATTAAAATAATTCATGACAT
CAGCACGATGTTTTCATGTGGTGCGTGGCGAGATCTTGCCGGAATGGATT
CGCTCTGGCAGCAGCATGCTGCAGAGCGCTGCTGCATAAATGAACAGGAA
CACGCATGATGAAGCGCACTAGCCCTCATGCCCCCTCCCGCCGCCGCCCT
CACGCATGCCATTTCCACAGGCAGCACGCGGAGGCCATGGCCAAGGGCAG
CGCGATCCCCAACTGTCGCGCCCTGCGCATCAACAACATCTAGCATACGT
GCAGGAGCAGACGTTGCGGAGCGTGCGCACCCTCGCCCCCCATCCCCGCC
CCCCCCTCACCCCTCCCCCCCCCCCCCCCGCCGCCACCCATCACACGCGC
AATTCTCATAGGCAGCACGCGGAGGCCATCTCTAAGGGCAGTGCCATCCC
CGGCCCCGCCCCCCTGGAGCTCATCGGCCCCTCTTCGGACCCCATCGGCA
GGCGCCTGCTGCGCGCCATGGGCTGGCGCGAGGGGCAGGGGGTCGGGCGC
CGCGTGCGCCGCCGCCCCGCAGCAGCAGCAGCGGCGGCAGCAGCGCCGCG
CACCGGCGAGACTGAGGGCGCCGCGCCCAAGCGCCCGCGGCTTGGCCCAC
TTCAACATCTTGAAGATGAATGCCAGCAGCAGCCCCAGGCGTCGTTGGCG
GCCGCTGGTGCCGGCGTCCCAGACGGGGACAGCAGCCGGCGGCGGCGGCA
GCGCGCAGAAACTCAACTTGAAGTTGAAGATGAGGCGCCGGCCGCGGTGC
GCGCGCGTTTCGCCGGCGGCCCGGTGACGTTCGCGCCCGACAACGCGGCG
GCGGCGGTTGCGGTGCCGCCGGCCAAGGCGGACGCGTACGGCGTGGGCTA
CGACCCCTACGCGCATGCGCCGGAGCTCGCCGCGGCGCTGCGCGCGGGCA
GCCGGCGCGGCGCCGCCGACGCCGCAGCAGCCGGTGAGCAGGGGCTGACT
CTGTGAGACGAGACGCGCGTACTTGAAGTGTACCCGTGTGTACTTTGGTG
GTGCACACATACGTGTTGCGGTGCTGCCGGCCAAGGCGGACGCGTACGGC
GTGGGCTGCAAACACAGTACTTGAAGCATACTTGTGTGTAATTTGGCAGG
TGAGTTTTGTATGCGCACCAGCAGCTGGAGCTCGCCGCGCGCACTGTGCG
CGGCAGCAGCAGCACCTCTGCGCAACCGCGGCAGTACCGGCGGCATTCAC
AGAGCACGGTACATGCGTACACAATGACACGCAGCGCAACCCCCACGCCT
TCACACCGCCCGCAGGCGTACTGCGTGCGCGAGGCGGTGCGCGGCGGCAG
CAGCAGCAGCAGCAGCAGTGATCAGCATCGCGGGGGCCTACTTGGCTTCT
GACCACAAACGTCAGGCGTACATGCCAAGGCAGACCAATAGGAACCCCAC
CTCTCTTAACACGGTACTGAGCCTCGATCCGCCTGCCTCTTTCCGCCAAA
CTTCTCCGCCGCGCTCAGGCGCGCGCCCCGCCGTGTACCGCATGAGCGAC
GCGGTGCGCGGCGGCGGCGGCAGCGCGCAGCAGCAGCAACAGTGCCCAGC
AGCAGCGCGGCCTGTATGGCTTTGCCATAGACGATGTGACGACGACGCTT
CCATACATACATACCTACTCAAAACAAATAGAACCCCCCCACTCTCAACC
CGGTACTCAAGCTCGATCGGTCTGGTAGCAAACCTCGATCCGTCTGTCTC
TTTCTGCTCGATTCTGCCGCCACTGCCCTCAGGCGCGCGCCCCGCGGTGT
TCCGCATGAGCGACACGGTGCGCGGCGGCGACAGCAGCAGCGCTTGACAT
GGCGGGGCCTGCTCGCCTCTGACCACACCCGTTCAGACATGAGAATCAAG
CCGTACATAGCATGCTCTAACCAACAGGAACCCTGCTCTCAACGCAGCAC
TCAGCCTCAATTTTTATTTTTCTGCCTCTTTCTGCTCAATTCTGCCCCCG
CGCTCCGGTCAGGCGCGCGCCCCGCCGTGTACCGCATGAGCGATGCGGTG
CGCGGCAGCAGCAGAGCTCAACAGCGCAGCGGCGGCGGCAGCGCTCAGCA
GCAGCGCGGCCTGCACGGCTTTGCCGTCGACGATGAGGACGACGACGCTG
CGTTCGGCGACGCTGCCATCGAGTATGACACCACGATAGTTGAAGATGAA
GTTGAAGTTGGAGGCAGCGGCGGCGCCGCGCTGTCGAGCGCCGTGGCGGC
GTGGACAAAGGGAGTTGAGGTGGATGCTGGTGAGGCGGCGGCGGCGCTGC
GGCGGCACGCGCGCTGCCCCTCTGACAACAGGTATGATAACTTGCTTCTT
GAAAGATGTGTTTTCTTGTGTGTGAGGACTGCGGCGGCTGTGTGGTGGCG
CTCGGCGTGTATGCTTTGGCCACTCGTTTCAACCATGGCGCAGTGGACAG
AGGGCGTTAGCCATCTGGGCGCGTGTGGGATGGAGTGTGATCATGATCAG
CGTATTGTGTCTGCATCAGCGCTCAGCGGATGAGGGCAGCGGGGGTATAC
TGCCCCCCCCTGCCTTTTGATCCTATCCACTCCCCTGCTGATTTCAGGCC
TGAGGGTTAGGGTTTGGGTTAGGGTTAGGCTCTTGTTGGCGGTCATACCT
GCACTTGCTGCTACTGCAGGCATTGCTTGGCATACCTACCTTGCCTGCAC
CTACATACCTACACACCTGTTGTTATGCATGCCTACCTACCTACCCTGCA
TACATCACCATACGTACTGTTGATGTGTACTTGTAGGCATCTGGTACGCA
TACCATACATGTGTACATGCCAGCCTGCGGACAAATGCACGCGTGCCTAC
CGGCCTGGTGCTACTTGTCCACATGTACACATCTGCGCAATTTGGTGCAT
GAATGCACGCATGTGCATTTGTGTAGACACACCCACAGACCGGCGCATGC
GTACATACCCATATGGTTGTTACATACCCTGCCTACCTCTCTGCAGGCCC
CCACCTGTCGGGTTTGGTGGTGGCGTCGATCCATACATACCCACATGATT
ATCACATACCCTACCTACCTACCTTCCTGCAGGCCCCCGCCCGTCGGTTT
CGTTGTGGCATCGATCCCCCTTCAGAAGCCCACATACTGGACCCCCCCGG
AACCCCCTAGCACCTTTGTCCCCCGGCACCAGTTCTCACCGGAACAGGAT
CGCGCGCGGTTGGAGATGGTTGATATGATCTGGGGGAAGGCGCGGGGGCG
CGTTGACGCAGGCCAGCGCGGAGCGCTGCTGGGCGAGGCGCCAAGAGTGG
TGACGCTCCAACAAGGTGAAGTTTGCAGTTAAATGCTGTGCTTAGTGATC
CGAAGTGTATTTGTAACAAGTAGGCGGGATTACATTGTGGAGTATGGATG
TACAGCACAACGAGGATAAACAGCACAACGAACACATGCACTGGAAGTAC
TCTGAAATATGTTGCTGTGGTTGATGGGCCAGCGCGGAGCGCTGCTGGGC
GAGGCGCCGCTAGTGGTGACGCTCCAGCAAGGTGAGTTTGTTTGCAGCGT
CACTTGTTGTATAGCATTAGTAGTCAGATGTATACCTTGAAGTATGGGTG
CGCAACGAACACAGGTACTCGATGTACTTTGAAATAGATTGCTGTGGTTG
ATGGGGCAACGCGGAGCGCTGCTGGGCGAGGCGCCGCGAGTGGTGACGCT
CCAGCAAGGTGAAGTTTGCAGTTGCGTGCTGTGTACGCGTAGTGGTCAGA
GCTATACGACGAAGTGCGGATACAGCACAAGAAGCACCGCGAGTGGTGAC
GCTCCAGCAAGGTGAAGTTTGCGGTTACGTGCTGTGCATACTTAGACTGG
TCCGCAGCTTATGCCTTGAGGTATGGTTGTGCAGCACAATGAGCACATCT
GCTCGCCCCCGAACCCGTAAGATAGAATCATCCATGCATCGTTTCCAGTG
GCATGTTGTCGAAAGGGTACTCGCAAGGTTGGATGCTGAGGGTACAGTCG
CAAGGAACACAGATACAACAGAGTAGTATAACAGGGTCAGGGGTGCACCT
ATACCTACTCCCACCTGCGTAGCGTCACCACAGGTTTTTGACGTGAAGGA
GAGGCAGATGGAGCGTGCGACCCATGCTGCTGGCTAGGGTTAGGGCTACA
GGTACACGACTTGAAGAGGCAACCTCACTTTTGGCGACAGGCGGAACACA
TGTGCCCGGCAAACAGTACGTTAGGGTAGGGTTGCGGGCAGGGCGGACTT
TATACCTATACCTACTCTAGCTGCGCAGCGCGGTATGAGGTGCTTGACGT
GCAGGAGAGGCTGTGGAAGCGTATGGCCGTTGCTTGTGGCCACGCAACGT
GCAGTAGGACCGGAAGAAGCGACCTCACTTTGGGCGATAATCTTGCACGA
CATACAGCAGTGGCAGCGGTTTCGCAATGCGCATGTCAGACGTGCGACGG
AGCGATGCGCCGAAGCGAATCGTTCAGCGTCGTCGCCAACATCAACTTGA
GGTACTGAGGTACGATGCTCTGGTGCGCATGCGCCTTATGCCATTGCCAG
TCACCAGATTGGGGCTCTCTCACCGCTACGTGCTATGCTGATTTGGTGGA
AACGCATTGTTGCATTCAGACTCTCGCCGCGACGGCGCGGGGCCAGAGCC
TCCCATACATCAACTTCAACCGTACTTTTGAAGTACGGTCTGTGTGCGCC
ATGACCCGGCATGTCAGTTGGATCTTTTCCTCACCAGCACATGTTTGTGT
TTTCTGCATCACAGTAGCTGCAGGGGCGACAGCAGCAGCGGCGGCGGCGG
CGGCGCCAGCGGCAGCACCGGCGGCGGCGGCGCGCGAAGTGTTCATGCCC
GCCGCGTTCGACGGGCTCAAGTCAGCCATGGCGAGTCGTTTCACCGGCAG
GTATGTATGCATGAAGCTTTCTCACAAGCAAGTTGAAGCGACTTGAGTTG
CAGCTGCGGTAGACCTCAAAGCCCGGCCATTGCGCCTTAATTGCTTTGAG
AAATGGCATGTTTGTGGTGTGTTGGCATGCATGGGCAAAACCTAGTTCAA
CTGTGACTCTCACCTACTTGTACGCCTGCGGCCTGAGGTCACAGTGCCAC
TCGCTAAAGTGCGTACCTGGCCGCCAGCGGCTTCTTGAGTCGAGCCAGAC
TTGACCACAACACACTCTATGTAGCTGAACGTCACTCTGATACCTACGCC
CACTCTCGGGTACCTACGCATAACCCTCCCCCGATGAATAAATGGCATAC
CACCAGGAACTCTAGTTTAAGCAAAGAAAGTCGTGCCGCTACATACTGCT
GCACAACATCCATCTGGTCAACTTTGTGGCTGCATAGATTTGCCAACTTC
ACTTGTGAGCCTTAACTTCTCACCTGCCCGCTCAGCTCGGGCACGGAGGC
GCCGCCCGCAGGCGCCATAGGCCTCAGCATGCCGACTTTATAGGCAATGG
CAAATTCCATCACCACAGAAAACCTCACTGCTACTGCCTACATGACCCCC
CGTCCCTGTTTTTTCGAATACAAACCTTGACTTCGCAACTTCAATTATAA
CTCTCCCGTGTGTGCAGCTCTGGAACGGAGGTGCTGCCCTCAGGCCCCAT
CGGTGTCAGCATGCGAGCGCCAAAAGCACCGGTAAAGTCTATCACGCCTC
ACTATTACTGCTGACATGACCTCCCGTCCCTGTCGTTTGATTTAAACTTC
AACTTTTGAACTTCAAATGTTGCTCTCCCGTGTGCAGCTCCGGCACGGAG
GCGCCACCCACTGGCCCCATCGGTCTCAGCATGCGAGCGCCAAAGGGACT
GGCAAAGTCTATCAGGCCACAGAAAGCTTCACTACTGCCTACATACCCCC
CCAGCCCCTGCATTTTAACTACAAATTTCAGCTTGTAACTTCAATTATCA
CCCTCCCGTGCAGCTCTGGCACGGAGGCGCCGCCCTCAGGCCCCATAGGC
CTGAGCATGCGCGCGCCAAAGGCTCAGGCTACTGCGGCACAGGCGCAGGC
GTTGCCGAAGGCGCGATCAAAACTGTTCAGGGGTGGTGAACCAGAGGTGC
TCATGCCCGAGGCCAGGCCGGCAGGGCTCAGCACCGGCGGCCTGAGCGCT
GCAACACCCAAGGTATGTATGTATGTATGTGCAAACAACAGTACGAAGCG
GTGGTCAGAAGTACACTTTCAGCTGAAAAGGTGTTCACAGAGACGCATGT
ACATTCTGGTTGCAAGTCCATGGACATCCACCACCTGGGCTTTTTCGCGC
CCTGAGCGAGAATTGACAAAGAGTACACGGAGATGCCATTTGTCGGTGTC
ATCTAGAACTCTGGAGTGATCGGCAATGCGCAACGAGACACTTTCGAGGT
GTTCACAAGACACATGCAGATTCTGGTTGCAAGCAGGACAGCCACCATCT
GGGCTTTTTCGCGCCCTGAGCGAGAATTGATGTAAGTACAGGGAGAGAAG
TGCATGTGTACTGGCTGTCGTGCGCGGTGGTCTGTGGGCTCTGAAGACAC
TGACAAATGGTGCAAGAAGCGTCGGATAAAAACATGAGAAAGCATCCAAG
AGCAGGCCGGAACGGGCTCAGTGCCAGCGGGCTGAGTGCTGCTGCGCATC
AGGTATGTATGTATATACGCCTGTCCATGCATGCGACAGTACGCTGTGCT
CATCAGGAGTAAGGAGAGATACAAGTATGGTTTCTGGTCTGTGTGTGCTG
GCAGCTGTTGTCTGCACCCGCTGCTTGATGCAAGATGTAAGAGCAGAAGC
AACAATAAGAAGAAACCAAGCTTTTGAGCCTTATGAAATTGCAGCAGTGA
TAACAATCATCAATGTCCGCAGACATTTTGTTGCATGTCAATGCTGGCAG
GACATGGGAGTGGCATCGGTTGAATGGCATGATCTGCCAGCAGCTCATAT
TGAATGCCTGTGTACCGGCAATGCAGTGCTGTGAGTTCGATGATGTGATA
TAGAAGTCATGTGCAGCATCCTTATGCCTCACATCATGTATTTCGATGGT
GTGACATAGAAGTCATGTGCAGCATCCTTATACCTCAGAGCATGTGTGTC
ATCGTTGTCTGGAAGTTATGGGTGCCCATGTACTTGCAATGCAGTGCTGC
CAACTTGACGGTGCGATGTACTTTGTACATAGCATACTTCGGACCGAGAG
CACGATCGTTGCCTGGAAGGTAAAAGCGCTGAAACGCATACATGCGACTT
ATCAAGGGCCTGTCACATTGCATAAGAGCTCTGCCGCAGAAACAGCTGCA
GTCTGTAGTGTCACATCAGTACCCATTGGCAACCTTCATCACGCGTGACT
CTCTTGTGTCAAATCAGTATTCTGATTGGTGTCCTTCATCGTGCGTGACC
CAACCTTGTGAAAGCAGATACGGGCAGTCCGTGTATGATAGGGCTAGGGT
CAGGGTTAGGGTTGGGATTAACTATGCGGTATAACATCACGGCAGCTGTA
GCTGCGCATCTACTCAAGGGCGCATGGCAGTGCTACGATGGCACGTCACA
TGCAGCTGCACAGCTGTCGCCGCAACCACTTGCCAGTACCCCAATATGTG
CACAACAGCGGCGATCAGAGAACGGCGCTGAATAATGATCCTTTCATTTC
ACTGCGACAGGTGGATGCAGAAGTAGAGGCCCCAATGTGCATGTAGTGAC
GTGCCCACTGCAACTTCACTCACTGCGACAGGTGGATGCAGAAGCAGAGG
CGGCGAAGGAGCGAGAGCGCCTCGCAGCACTGGAGCCCACTCGCACCGTC
AGCGTCTGGCGCCCATCGCCGCTGCTATGCAAGAGGCTCAACGTGAGCTT
CGCGTACATTGCTGATTTTCGTGGCTGCTCTGTGTGTTCTGTTGTCAGAC
TCCGTAAAATCTGGCGTGTTCGCCCTGCAGTGTCGCGCTGTCTCGTCGCT
CTGTCTGGCAGATGCACTCGATCGCCCACGCACGCATCCCCGACAACCTC
TTCCAGCAGCAGTGCCCCAGCAGTCGTTTTCCATCCAACTTCAACCCATG
CGTCACTCCTTGAAGTTCACCCTTGCCCCCCCCCCCCTTGCGCGCCGCTC
GCAGGTGCCGGTTCCGCCGGCCTCGCGCGAGGTGCAGTGGGGGACGCAGG
CTGGCCGCGCACAGGAAAAATCCACGGAAATTTTCCATGAAAGCATTGGC
AAATTCGCCCCGTCCGCTGCCGCCGCCGCCAAGCTGCCGCTGCTGCACGG
CGTTGGTGAAGGGGCACCGGCAGCGGTGACGGTTGGGGCGGGCCTGGTCC
AGAGGAATGGCGCGGCGGCAGCGGCGGCGGGAGGGGCGCAGGAGCCCCCC
GCGCCGCCGCTTGATATTGAAGTTGCGGTAAAGCCGCCGCTGGACCTGTT
CAAGCGCATCTTCGAGCCCGACTCGGACAGCGAGGCGGAGGCGGAGGCGG
CGCCGCCGGGTATGTATGTATGCGTACGAATGAGCGCGGTGACGCTCAGT
TATGCATGTACTGTTTATCTTGATTCTCGCTCAGGGCGCGAAATAGCCCA
GATGGTGGATGTCCATGGACTTGCAGCCAGATTCTACATGTGGCTTTGTG
AACATCTTGAAAGCCTCATTGCGCATTGCCGATCACTTCGAAATGACATC
GGCATGTTCCTCAAAGTATGTCAGCGTCCAGCTGTGATGACGCTCCAGGA
CGCATCGCGAATGGCATCAATCAGGACTGGATAGCGCGCGCCCGTCCGCT
GCGCCAGGCAATTCTTGATTCCACCCGCGGCGGTCCGTCGAATGCGCTTT
GCTCAACGGCGACAAACCGTGCATCAATGCACTCTGCGAATCTCACTCAG
TGTCTGCTCGTACACTGCCTGCATCGCTGCTGTCGCAGCTGCGCCGCCTA
CTGCAGCGGGCCCGCCCGCGATGCGCACCGTGAAAGGGCCCGCCATGCCT
CCGCTGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGGAGGCAGCAGCGCT
CAGGCCAGAGTGGGCCGTCGAGAGCGCGGCGAAAGCGCAGCGGTACGGCG
CGTCCTCCAGCGAATCAGAGTTAGAGTCTGACTCAGAGTCTGGCAAGTCG
CGCACCAAGTCGGGTCCGGGGGAGCGGCGGCGCGAGCGAAGGCGCAGCAA
GGAGCGATCCGGCAAAGAGCAGCGGCGGCGGCGCAGCAGCGGCAGCAGCA
GCAAGAAGCACAAGTCGGAGTCCAAGTCGGGGCGGAAGGCGGAGCGCAGG
GGGGACAGGCGCGACGAGCGTCGCGCCGATAAGAAGCGCAAGCACAAGAA
GCGCTCTTCATCGCGGCGCAGCGATGGCGACGGCAGCGACGGCGGCGGCA
GGGGGGTGTCGCGCCGCGCGGATGACGGCGGCGGCGGCAGCGACGGCGGC
GGCGGCGGCGGGGGCAGTCGCAAGGACAGGAAGAAGAGTAGACACAAGTA
GAGGCAGCCGAGCGCCCAGGTGTTGCCGTTGCGACGCATCTCTTGGGACC
CCTGTTGGTGTCGTACAGGTGCCGAGATGCGTTTTGGTGAGAACACCTGG
GTGCACAGTACGATGCGCAGCAGTGGGCGCATGCCGAGCCCCAAGCAAGC
GCGCCTTGCGGTGTGAGCGGCGCGTCTCAGTATGTAACGATGTGCGCGCA
GAGTGCTATCATGTGTACATAGCAGTGTACAGTCGGCAGCTTGAGGCCAC
CGGGCCTCCGGTGTCTGTGCTTTGCGCCATCACACGTGTCGTGAATAGAC
ACAGGTCAT back to topCoding sequence (CDS) from alignment at Contig_105:168289..180597+ >mRNA_12726 ID=mRNA_12726|Name=jgi.p|Trimin1|351998|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3003bp|location=Sequence derived from alignment at Contig_105:168289..180597+ (Tribonema minus UTEX_B_3156 ) ATGGAGGGCAAGGCAGCCAAACGGCCTGAACGCTTTCATGGAGCCTTCAC CGGCGGCTTCAGCGCGGGCTACTTCAACACGGTGGGCACCGCGGAGGGGT GGGCGCCCTCCAAGTTCGTCTCATCGCGCGACAGGCGGGCGGGAGGGGGT GAGGATGGCGGTGCTGCGGCGGCGGCGGCGGCGCAGCAGCAGAGGCAGCG GCCGGAGGACTTCATGGACGAGGAGGACGGCCTGCTCGGCCGCACGCTGC AGGAGGACGGGCTGCTGGGCCGCACGCTGCAGGCAAAAGAGGACTTCGAC ACTATGGGCCAGACCGCTGCTGCCGCTGCCAGGCAGCACGCGGAGGCCAT CTCTAAGGGCAGTGCCATCCCCGGCCCCGCCCCCCTGGAGCTCATCGGCC CCTCTTCGGACCCCATCGGCAGGCGCCTGCTGCGCGCCATGGGCTGGCGC GAGGGGCAGGGGGTCGGGCGCCGCGTGCGCCGCCGCCCCGCAGCAGCAGC AGCGGCGGCAGCAGCGCCGCGCACCGGCGAGACTGAGGGCGCCGCGCCCA AGCGCCCGCGGCTTGGCCCACTTCAACATCTTGAAGATGAATGCCAGCAG CAGCCCCAGGCGTCGTTGGCGGCCGCTGGTGCCGGCGTCCCAGACGGGGA CAGCAGCCGGCGGCGGCGGCAGCGCGCAGAAACTCAACTTGAAGTTGAAG ATGAGGCGCCGGCCGCGGTGCGCGCGCGTTTCGCCGGCGGCCCGGTGACG TTCGCGCCCGACAACGCGGCGGCGGCGGTTGCGGTGCCGCCGGCCAAGGC GGACGCGTACGGCGTGGGCTACGACCCCTACGCGCATGCGCCGGAGCTCG CCGCGGCGCTGCGCGCGGGCAGCCGGCGCGGCGCCGCCGACGCCGCAGCA GCCGGCGCGCGCCCCGCCGTGTACCGCATGAGCGACGCGGTGCGCGGCGG CGGCGGCAGCGCGCAGCAGCAGCAACAGCGCGCGCCCCGCGGTGTTCCGC ATGAGCGACACGGCGCGCGCCCCGCCGTGTACCGCATGAGCGATGCGGTG CGCGGCAGCAGCAGAGCTCAACAGCGCAGCGGCGGCGGCAGCGCTCAGCA GCAGCGCGGCCTGCACGGCTTTGCCGTCGACGATGAGGACGACGACGCTG CGTTCGGCGACGCTGCCATCGAGTATGACACCACGATAGTTGAAGATGAA GTTGAAGTTGGAGGCAGCGGCGGCGCCGCGCTGTCGAGCGCCGTGGCGGC GTGGACAAAGGGAGTTGAGGTGGATGCTGGTGAGGCGGCGGCGGCGCTGC GGCGGCACGCGCGCTGCCCCTCTGACAACAGGCCCCCGCCCGTCGGTTTC GTTGTGGCATCGATCCCCCTTCAGAAGCCCACATACTGGACCCCCCCGGA ACCCCCTAGCACCTTTGTCCCCCGGCACCAGTTCTCACCGGAACAGGATC GCGCGCGGTTGGAGATGGTTGATATGATCTGGGGGAAGGCGCGGGGGCGC GTTGACGCAGGCCAGCGCGGAGCGCTGCTGGGCGAGGCGCCAAGAGTGCG CGGAGCGCTGCTGGGCGAGGCGCCGCTAGTGGTGACGCTCCAGCAAGGGG CGACAGCAGCAGCGGCGGCGGCGGCGGCGCCAGCGGCAGCACCGGCGGCG GCGGCGCGCGAAGTGTTCATGCCCGCCGCGTTCGACGGGCTCAAGTCAGC CATGGCGAGTCGTTTCACCGGCAGCTCCGGCACGGAGGCGCCACCCACTG GCCCCATCGGTCTCAGCATGCGAGCGCCAAAGGGACTGGCAAACTCTGGC ACGGAGGCGCCGCCCTCAGGCCCCATAGGCCTGAGCATGCGCGCGCCAAA GGCTCAGGCTACTGCGGCACAGGCGCAGGCGTTGCCGAAGGCGCGATCAA AACTGTTCAGGGGTGGTGAACCAGAGGTGCTCATGCCCGAGGCCAGGCCG GCAGGGCTCAGCACCGGCGGCCTGAGCGCTGCAACACCCAAGGTGGATGC AGAAGCAGAGGCGGCGAAGGAGCGAGAGCGCCTCGCAGCACTGGAGCCCA CTCGCACCGTCAGCGTCTGGCGCCCATCGCCGCTGCTATGCAAGAGGCTC AACGTGCCGGTTCCGCCGGCCTCGCGCGAGGTGCAGTGGGGGACGCAGGC TGGCCGCGCACAGGAAAAATCCACGGAAATTTTCCATGAAAGCATTGGCA AATTCGCCCCGTCCGCTGCCGCCGCCGCCAAGCTGCCGCTGCTGCACGGC GTTGGTGAAGGGGCACCGGCAGCGGTGACGGTTGGGGCGGGCCTGGTCCA GAGGAATGGCGCGGCGGCAGCGGCGGCGGGAGGGGCGCAGGAGCCCCCCG CGCCGCCGCTTGATATTGAAGTTGCGGTAAAGCCGCCGCTGGACCTGTTC AAGCGCATCTTCGAGCCCGACTCGGACAGCGAGGCGGAGGCGGAGGCGGC GCCGCCGGCGGGCCCGCCCGCGATGCGCACCGTGAAAGGGCCCGCCATGC CTCCGCTGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGGAGGCAGCAGCG CTCAGGCCAGAGTGGGCCGTCGAGAGCGCGGCGAAAGCGCAGCGGTACGG CGCGTCCTCCAGCGAATCAGAGTTAGAGTCTGACTCAGAGTCTGGCAAGT CGCGCACCAAGTCGGGTCCGGGGGAGCGGCGGCGCGAGCGAAGGCGCAGC AAGGAGCGATCCGGCAAAGAGCAGCGGCGGCGGCGCAGCAGCGGCAGCAG CAGCAAGAAGCACAAGTCGGAGTCCAAGTCGGGGCGGAAGGCGGAGCGCA GGGGGGACAGGCGCGACGAGCGTCGCGCCGATAAGAAGCGCAAGCACAAG AAGCGCTCTTCATCGCGGCGCAGCGATGGCGACGGCAGCGACGGCGGCGG CAGGGGGGTGTCGCGCCGCGCGGATGACGGCGGCGGCGGCAGCGACGGCG GCGGCGGCGGCGGGGGCAGTCGCAAGGACAGGAAGAAGAGTAGACACAAG TAG back to top
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