mRNA_12714 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351992
Unique Name	mRNA_12714
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351992 vs. uniprot
Match: A0A835ZD73_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD73_9STRA)

HSP 1 Score: 1020 bits (2637), Expect = 0.000e+0
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 1

Query:   28 MRHCIIKVTFPLDDDGMHVFNDEILWDLLSDGAATALDFAITCARRYGLTAEQTAALAGDVQAQLDRHLARVPQSAQQRCPTLGTYGRTRTSGGGGFLERGVGARGSRPRTMEVEEYGPPLAEADLDSYVARLKIELQPLNRPAQYFSENTCHICHNRKKDVFNCCSTGKNKHNYCGFHVISKFGIPSVAALRADPSLWTECPACALVCPCTACNKLLRDSVRRDRKLNPHLYPETVEATPANAAAAXXXXXXXXXXXXXXXXXXPPXATAPPAXXXXXXXXXPQPLPPXXXXXXXXXXXXXSSAPRQQQPMVRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDEVWRDEGLQFCVVCDGSRAPNVRCCACPRAFHTRCAKPAPXXXXXXXXXGSGAWRCCDCEGPLRGGIAPPQFQGTNHLRACRALLSFMRDSAFANNVXXXXXXXXXXXXXXXXXXXXXXNFTHPVTADDFGAAAAAEWLRYERVVPPDKRMDLSTVLNKLNSHQYGVEGDGGAGMRHFVRDMRQIWVACWTFNEYGSALYRIAAILSHCVEAWIAKTLLPMLRPDCRAAIQALPPQPQHAWAPPALAAAAAEPIAKRMRHH 1854
            MRHCIIKVTFPLDDDGMHVFNDEILWDLLSDGAATALDFAITCARRYGLTAEQTAALAGDVQAQLDRHLARVPQSAQQRCPTLGTYGRTRTSGGGGFLERGVGARGSRPRTMEVEEYGPPLAEADLDSYVARLKIELQPLNRPAQYFSENTCHICHNRKKDVFNCCSTGKNKHNYCGFHVISKFGIPSVAALRADPSLWTECPACALVCPCTACNKLLRDSVRRDRKLNPHLYPETVEATPANAAAAXXXXXXXXXXXXXXXXXXPPXATAPPAXXXXXXXXXPQPLPPXXXXXXXXXXXXXSSAPRQQQPMVRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDEVWRDEGLQFCVVCDGSRAPNVRCCACPRAFHTRCAKPAPXXXXXXXXXGSGAWRCCDCEGPLRGGIAPPQFQGTNHLRACRALLSFMRDSAFANNVXXXXXXXXXXXXXXXXXXXXXXNFTHPVTADDFGAAAAAEWLRYERVVPPDKRMDLSTVLNKLNSHQYGVEGDGGAGMRHFVRDMRQIWVACWTFNEYGSALYRIAAILSHCVEAWIAKTLLPMLRPDCRAAIQALPPQPQHAWAPPALAAAAAEPIAKRMRHH
Sbjct:    1 MRHCIIKVTFPLDDDGMHVFNDEILWDLLSDGAATALDFAITCARRYGLTAEQTAALAGDVQAQLDRHLARVPQSAQQRCPTLGTYGRTRTSGGGGFLERGVGARGSRPRTMEVEEYGPPLAEADLDSYVARLKIELQPLNRPAQYFSENTCHICHNRKKDVFNCCSTGKNKHNYCGFHVISKFGIPSVAALRADPSLWTECPACALVCPCTACNKLLRDSVRRDRKLNPHLYPETVEATPANAAAAXXXXXXXXXXXXXXXXXXPPXATAPPAXXXXXXXXXPQPLPPXXXXXXXXXXXXXSSAPRQQQPMVRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDEVWRDEGLQFCVVCDGSRAPNVRCCACPRAFHTRCAKPAPXXXXXXXXXGSGAWRCCDCEGPLRGGIAPPQFQGTNHLRACRALLSFMRDSAFANNVXXXXXXXXXXXXXXXXXXXXXXNFTHPVTADDFGAAAAAEWLRYERVVPPDKRMDLSTVLNKLNSHQYGVEGDGGAGMRHFVRDMRQIWVACWTFNEYGSALYRIAAILSHCVEAWIAKTLLPMLRPDCRAAIQALPPQPQHAWAPPALAAAAAEPIAKRMRHH 609

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351992 vs. uniprot

BLAST of jgi.p|Trimin1|351992 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZD73_9STRA	0.000e+0	100.00	PHD-type domain-containing protein n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_105	contig	Contig_105:71152..81733 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351992\|estExt_Genemark1.C_Ctg_1050012
BRITE	ko00000,ko00001,ko01000,ko01001,ko04121
KEGG Pathway	ko05168,ko05203,map05168,map05203
KEGG ko	ko:K08881,ko:K08883,ko:K15413
EC	2.3.2.27
GOs	GO:0000122,GO:0000723,GO:0000981,GO:0001101,GO:0001650,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0003713,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006974,GO:0006978,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010594,GO:0010596,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010632,GO:0010633,GO:0010646,GO:0010941,GO:0010942,GO:0012505,GO:0016043,GO:0016604,GO:0016605,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019900,GO:0019904,GO:0022603,GO:0023051,GO:0023052,GO:0030330,GO:0030334,GO:0030336,GO:0030522,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032386,GO:0032387,GO:0032507,GO:0032526,GO:0032879,GO:0032880,GO:0032897,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0033993,GO:0034097,GO:0034340,GO:0034341,GO:0034399,GO:0034504,GO:0034613,GO:0034641,GO:0035556,GO:0040012,GO:0040013,GO:0042221,GO:0042592,GO:0042770,GO:0042772,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043392,GO:0043433,GO:0043900,GO:0043901,GO:0043903,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045087,GO:0045185,GO:0045765,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046782,GO:0046822,GO:0046823,GO:0046825,GO:0046826,GO:0046983,GO:0048384,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048583,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051090,GO:0051091,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051271,GO:0051276,GO:0051457,GO:0051641,GO:0051651,GO:0051704,GO:0051707,GO:0051716,GO:0060249,GO:0060255,GO:0060333,GO:0060337,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070087,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071357,GO:0071704,GO:0071840,GO:0072331,GO:0072595,GO:0080090,GO:0090087,GO:0090304,GO:0090317,GO:0097159,GO:0140110,GO:1901342,GO:1901360,GO:1901363,GO:1901700,GO:1902041,GO:1902044,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903827,GO:1903828,GO:1904950,GO:2000026,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2001141,GO:2001233,GO:2001236
Preferred name	SP110
Description	zinc ion binding
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG2177@1\|root,KOG2177@2759\|Eukaryota
Evalue	1.12e-08
Seed ortholog	157072.XP_008866048.1
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Bromodomain and RING/FYVE/PHD-type zinc finger protein
Ec32 ortholog	Ec-00_010950.1
TranscriptId	352314
Track	FilteredModels1
ProteinId	351992

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351992	gene_12714	Tribonema minus UTEX_B_3156	gene	Contig_105 71152..81733 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351992	Trimin1\|351992\|estExt_Genemark1.C_Ctg_1050012	Tribonema minus UTEX_B_3156	polypeptide	Contig_105 71179..81733 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12714_1	exon_12714_1	Tribonema minus UTEX_B_3156	exon	Contig_105 71152..71199 +
exon_12714_2	exon_12714_2	Tribonema minus UTEX_B_3156	exon	Contig_105 72616..72794 +
exon_12714_3	exon_12714_3	Tribonema minus UTEX_B_3156	exon	Contig_105 74055..74193 +
exon_12714_4	exon_12714_4	Tribonema minus UTEX_B_3156	exon	Contig_105 75439..75647 +
exon_12714_5	exon_12714_5	Tribonema minus UTEX_B_3156	exon	Contig_105 76967..77681 +
exon_12714_6	exon_12714_6	Tribonema minus UTEX_B_3156	exon	Contig_105 78369..78440 +
exon_12714_7	exon_12714_7	Tribonema minus UTEX_B_3156	exon	Contig_105 78756..78978 +
exon_12714_8	exon_12714_8	Tribonema minus UTEX_B_3156	exon	Contig_105 80101..80224 +
exon_12714_9	exon_12714_9	Tribonema minus UTEX_B_3156	exon	Contig_105 81586..81733 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_12714	UTR5_12714	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_105 71152..71178 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12714	CDS_12714	Tribonema minus UTEX_B_3156	CDS	Contig_105 71179..71199 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_105:71152..81733+
coding sequence from alignment at Contig_105:71152..81733+

spliced messenger RNA

>mRNA_12714 ID=mRNA_12714|Name=jgi.p|Trimin1|351992|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1857bp|location=Sequence derived from alignment at Contig_105:71152..81733+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGCGGCGGACAAAGCGGCGCAGGATATGAGGCACTGCATCATTAAGGT
GACGTTCCCCCTGGACGACGACGGCATGCACGTCTTCAATGACGAGATTC
TGTGGGACTTGCTGAGCGATGGCGCGGCCACAGCGCTGGACTTTGCAATA
ACGTGTGCGCGCCGCTACGGCCTCACCGCGGAGCAGACGGCGGCGCTCGC
GGGGGATGTACAGGCGCAGCTTGACAGGCACCTCGCGCGCGTCCCGCAGA
GCGCGCAGCAGCGCTGCCCCACGCTCGGCACGTACGGGCGCACGCGCACC
TCCGGCGGCGGCGGCTTCCTGGAGAGGGGGGTCGGCGCACGGGGGTCGCG
GCCGCGGACCATGGAGGTGGAGGAGTACGGGCCGCCACTGGCGGAGGCCG
ATCTTGACAGTTACGTAGCGCGCCTCAAGATCGAGCTGCAGCCCCTGAAC
CGCCCCGCGCAGTACTTCTCGGAGAACACGTGCCACATCTGCCACAACCG
CAAGAAGGACGTCTTCAACTGCTGCTCCACGGGCAAGAACAAGCACAACT
ACTGCGGCTTCCACGTCATCTCCAAGTTCGGCATTCCCTCCGTCGCGGCG
TTGCGCGCCGACCCCAGCCTCTGGACGGAGTGCCCCGCGTGCGCGCTCGT
GTGCCCGTGCACGGCGTGCAACAAGCTGCTGCGCGACTCGGTGCGCCGCG
ATCGCAAGCTCAACCCGCACCTCTATCCCGAAACCGTCGAAGCCACCCCC
GCCAACGCTGCCGCCGCTGCCCCTGCCGTCGCTGCCGCCGCCACCCCTGC
CGCCGCCGCCGCCGCCACCGCGCCTCCTGCCGCCACCGCGCCTCCTGCCG
CCGCTGCTGCCGCCCCTGCCGCGGCACCGCAGCCGCTGCCGCCGGCGCCG
GCGGCAGCGACGGCGCCACCTGCCGCTGCCAGCAGCAGCGCTCCGAGGCA
GCAGCAGCCGATGGTGCGCGGCGGCCGCGGGCGCGGGCGCGGGCGCGGCT
CCGGCAGGCCCCGCGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCGCTGCC
GCAGCTGCTGCGGAGCGGGACGAGGTGTGGCGCGACGAGGGCCTGCAGTT
CTGCGTCGTGTGCGACGGCAGCCGCGCGCCAAACGTGCGGTGCTGCGCGT
GCCCGCGCGCGTTCCACACGCGCTGCGCGAAGCCCGCGCCGCCGCCGCCG
GCGCTGCTGCTCGGCGGCGGCAGCGGCGCGTGGCGCTGCTGCGACTGCGA
GGGGCCGCTGCGCGGCGGCATCGCGCCGCCGCAGTTCCAGGGCACCAACC
ACCTGCGCGCGTGCCGCGCACTGCTGTCATTCATGAGGGACAGCGCCTTC
GCCAATAACGTGGGCACCAACCACCTGCGTGCGTGCCGGACGCTGTTGAA
GTTCATGACGGACAGCGCCCTCGCGGACAACTTCACGCACCCCGTAACGG
CCGACGACTTTGGCGCCGCCGCCGCTGCGGAGTGGCTGCGCTACGAGCGC
GTGGTGCCGCCGGACAAGCGCATGGACCTGAGCACTGTGCTGAACAAGCT
CAACAGCCACCAGTACGGCGTGGAGGGCGACGGAGGCGCCGGCATGAGGC
ACTTTGTGCGCGACATGCGCCAGATCTGGGTCGCGTGCTGGACGTTCAAC
GAGTACGGCAGCGCGCTGTACCGCATCGCTGCGATACTGAGCCACTGTGT
GGAGGCGTGGATCGCCAAGACGCTGCTGCCGATGCTGCGGCCCGACTGCC
GCGCCGCCATACAGGCGCTGCCGCCGCAGCCGCAGCACGCCTGGGCGCCG
CCCGCGCTAGCGGCAGCGGCCGCGGAGCCCATCGCGAAGCGCATGCGGCA
CCACTGA

protein sequence of jgi.p|Trimin1|351992

>Trimin1|351992|estExt_Genemark1.C_Ctg_1050012 ID=Trimin1|351992|estExt_Genemark1.C_Ctg_1050012|Name=jgi.p|Trimin1|351992|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=610bp
MRHCIIKVTFPLDDDGMHVFNDEILWDLLSDGAATALDFAITCARRYGLT
AEQTAALAGDVQAQLDRHLARVPQSAQQRCPTLGTYGRTRTSGGGGFLER
GVGARGSRPRTMEVEEYGPPLAEADLDSYVARLKIELQPLNRPAQYFSEN
TCHICHNRKKDVFNCCSTGKNKHNYCGFHVISKFGIPSVAALRADPSLWT
ECPACALVCPCTACNKLLRDSVRRDRKLNPHLYPETVEATPANAAAAAPA
VAAAATPAAAAAATAPPAATAPPAAAAAAPAAAPQPLPPAPAAATAPPAA
ASSSAPRQQQPMVRGGRGRGRGRGSGRPRAAAAAAAPAAAAAAAAERDEV
WRDEGLQFCVVCDGSRAPNVRCCACPRAFHTRCAKPAPPPPALLLGGGSG
AWRCCDCEGPLRGGIAPPQFQGTNHLRACRALLSFMRDSAFANNVGTNHL
RACRTLLKFMTDSALADNFTHPVTADDFGAAAAAEWLRYERVVPPDKRMD
LSTVLNKLNSHQYGVEGDGGAGMRHFVRDMRQIWVACWTFNEYGSALYRI
AAILSHCVEAWIAKTLLPMLRPDCRAAIQALPPQPQHAWAPPALAAAAAE
PIAKRMRHH*

mRNA from alignment at Contig_105:71152..81733+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12714 ID=mRNA_12714|Name=jgi.p|Trimin1|351992|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10582bp|location=Sequence derived from alignment at Contig_105:71152..81733+ (Tribonema minus UTEX_B_3156 )
GCGGCGGCGGACAAAGCGGCGCAGGATATGAGGCACTGCATCATTAAGGT
ATGTATTAGTCATGACATATACGTACTGCATAGACCTGTAGTATGACGCC
TACATACCATATACATAGCATCATCAGGGCATGGCGCATACATATCGTAT
CATAACACTCCAATACAGTACCATGTGTCACACAGCGGAGCTGGCGGCGG
CGGACAAAGCGGCGCAGGATATGAGGCACTGCATTATTAAGGTATGATGC
ATACATACCGTACCGTAGCAATGTAATCTAGACATTATCACGCATCATGC
AGCGGAGCAGGCGGCGGCGGACAAAGCGGCGCAGGATATGAGACTTGTCA
CCTAGAGCTCTACGATCTTTTGATTCGTTTTCATATGAGGCACTGCATCA
TCAAGGTATGTACGAGTCATGACATACACGTACTGCATAGACCTGTAGTA
TGACGCCTACATACCATATACATAGCATCATCAGGGCATGGCGCATACAT
ATCGTATCGTAGCACTCCAATACAATACCATGCGTCACACAGCGGAGCTG
GCAGCGGCAAACAGAGCGGCGCTGGATACGAGGCACTGCATGTGTATCAT
TACTGTGTGGCGCGCACCGCATGTATGTATGTATGTAAATCAATCGGGGC
AAACACCGCCGAGGCTACGAGCTTGTCAGTGCAAACTACTTGGCACGCCA
CCATATATATGTAGTGGTTTACTACACTTCAAAGTACCTTGCATGATGAC
CGACCGTATTGTAGTCGTTCAATACACTGCCACACCTCACACAGCGGAGC
CTGTCGGCGGCAGACAAAGCCGCGCAGGCTACGAGGCACTACACCATTAT
GGTTTGACGCATACGTGCTGTATAGACCTGTAGTATGAGGCCCACACATC
CCATACAGACACCATGTTTTTTTGCAGAATGGAGCTGGCGTGGCGGCGGA
CAGAGCGGCGGAGGATGGCACTGCATCATCAGGATGCGGCACACGCGCGT
GTATGTGTAGTTGTTTGCGACACGACATACCTTGCAAAACTGTTTTATTG
TAGCCAATGCACTACCTCACACAGCGGAGCTGTTGGTGTCGAGGCACCTT
TGTGAAGGTATACAATGCACCGTGGTGGGGTGCTTGCCGCAACCTCCATG
GCACGTTTATGTGACATCGAGCTAGAAATTTGCTGAGCAATGGCGTGCGT
GCGCTCCACGCGTCGGCGCAGCAGGCATCTTTGGGTAGGTATACTCTCAA
GCACAACACCGCAACGGGGTAATGGTCACTAACCCTAACCTCAACCTCAA
TTCAACCTGGGCTTCTGCAGGTGATGTTCCCCCTGGACAACGACGGCATG
CACGTCTTCAGCGTTGAAGTGTTGTGTGAAGATGGCGCGGCCACGGCAGC
ACTCAACTTCACCTCAATCAGCACTGTCCGCAACAATAACCTCAACTTCA
AATCTGACCTGCAGGTGACGTTCCCCCTGGACGACGACGGCATGCACGTC
TTCAATGACGAGATTCTGTGGGACTTGCTGAGCGATGGCGCGGCCACAGC
GCTGGACTTTGCAATAACGTGTGCGCGCCGCTACGGCCTCACCGCGGAGC
AGACGGCGGCGCTCGCGGGGGATGTACAGGCGCAGCTTGACAGGTGTGTG
CATACATGCAAAGTTTGTGCATGCATGCAGAGGGTTTGCAGCCTGCTTTC
TACTGATAAGATGGTGGTAAGAAGTTGGTAGCTTGCGGGGACGTCCAGGC
GCAGCTCGCCAGGTGTGCGTTTTCGTGCATACATGCAAATTTTGCGCACT
ATGTTTTGTAGGCTAAACATACATGGTGTCACCATGTTCGGAAGGCTCAA
TGTAATGTTCTGTAGGTTGAACATAGCGGGGGATGTGCTGGCGCAACTCG
ACAGGTGTGTTTTCGTGTTTATACATGCAGAGTCGCTTTGTGCAGGTATG
ATATTTTGAAACAGTAGCTCGCGGGGGACGTCCAGGCGCAGCTCGACAGG
TGTGTGCATACATGCAGAATTTGGGTGCTTTGTTTTGTAGACGAACTTCA
ACGATGACCGGGGGTGTTTTGTGTTTGCATGATCACCGGGGTAACATGCG
GGCTGACCATAGCTCACGGGGGACGTGCAGGCGCAGCTCGACGGGTGCGT
ATTCGTGTGCATACATGCAGCATATCTGCACTTCATGTTTATCGACAGAA
GCAGTAATGAGACGCAAAAAAGTTACTGTATTTGTGCAGTTTCTAATACT
TCTAGTAGTCATGAATGTAAAGTAATTGATCCAGATCTTCGCCATATGTA
TGGAGCTCGTGCATACTTACCCCACTGTACGTCACCTACATGCCTGCCGT
GCCCTGAACGCTGCCCCACTGTTGCCATGCAGCGCGCATACGTACTTACC
AGCTTTACATACTGTGTAGCTGCATACCTGCTGTGCCCCGCAGGCACCTG
AGCGCTGCCCCATTGTCCCCATGCAGCGCGCTCAAATACTTGCCCATTGC
ACCCACATGCCCCCCGCCCCCGCAGGCGTCTCACACGCGTCCTGCAAGAG
CGCACAGCACGCATACGTACCGACCCGCTGCACCTATACCTACGTACCTG
GCCCCCGCCCCGCAGGCAGCTCGTGCGCGGCCCGCAGAGCATGCAGCGCA
CATAAGAACTGTACGATCTTTTGATTCGTTTCCACATGTACTAACCCGCT
CTATGTCTACAAACATACCTGCCCCCCCGCCGCCGCAGGCACCTCGCGCG
CGTCTCGCAGAGCGCGCTGTGTGCATGCGCACTTAACCGCAGTACCTATA
GTGGAAGTATGCATTTGCCGTGCCCCACAGGCACCTGAGCGCTGCCCCAC
TGTCCCGATACGTACTTACCCGCTTCATCTATACCTACTTACCGCCCCCG
CAGGCACCTCGCGCGCGTCCCGCAGAGCGCGCAGCAGCGCTGCCCCACGC
TCGGCACGTACGGGCGCACGCGCACCTCCGGCGGCGGCGGCTTCCTGGAG
AGGGGGGTCGGCGCACGGGGGTCGCGGCCGCGGACCATGGAGGTATGTGG
GATCGGGATTGGAGTTGGGATTTGAGCAAGGGTTAGGGCCAGGGTTTGGG
GTAGGGTTGGGTTAGGGTTAGGGTCGCAGTAAGGGTTGGGCACGCGCAAG
CGAGAGGGGGGTCGGCGCACTAGGGTTGCGGCCGCGAACCATGGAGGTAT
GTATGTACGGCCGGGGTTAAGACTAGGGTTAGGGCCATGGTTCAGGGTAG
GGTAATGGTATGTCAGGGTCAGGGTTAGGATAGGGCATGCGCACCTCTGG
CGGCGGCGGCGCCCTGGAAAGGGGGTTCGGCGCACGAGGGTCATGGCCGC
GGACCATGGAGGTATGCACAAGTGTAGCAGTGCGCCTCGCCGGCTAGTTT
TAGAGTAAGGGTTAGTGTCAGGGTTCCGGGGTAGAGGGGGGTCAGCGCGC
AAGGGTCGCGACCGCGGACCACGGAGCTATGTATGTAGCAGTGCATGCCG
CCGTTGTTAGACTTCGAAGCAACAGGCCACCTCTGGCCGACGCCGATCTC
GACAGTAGTTGCATATCTCAACAGTGTTATGACACGCTACGGCTAAGAAG
CACCTGCTAGTGTTCATAGTCACCAAAACCCAGTTTTCAAACTGCCAGTC
TGACACCCACAACCACTACATGCAGCAAGTACTGTATCACGATAATTGCT
GCTGAATCACAATGACGTATGCAGTGGAGGAGTACGAGCCGCCGCTCTCG
GAGTCCGATCTTGACGGTTACGATCTCGGCAGTCACGTCGAGCTACTGCG
TGATAAGCACCTGCTGGTGGTCAGAGCACAACAGGATGCTAATGAGACCT
ATGACCACTGTCATCGACCAGTACATACAGCAATCATTATAACAGCTGCC
GCTTAATGACAATGATATACATACAGGTGGTGGAGTACGGACCGCCTCTA
GCGGAGGCTGATCTCGACAGTTACGTAGCGCGCCTCAACGTGGAGCTGCA
GCCGCTCAACCGCCCCGTGCAGTACTTCTCGGAGAACACGTGTCACATCT
GCCAAGTAATACTTGATAATGCGCCTGTTGTGACGATTACGCAGGTGGAG
GAGTACAGGCCGCCGCTGGCGGAGGCGGATCTGACAGTTACGATCGTGGC
AGTTACGTGGCGCCGCGCTGCCGCGTAATAAGCCCTGTGCTAGTGCTAGT
CTGACACCCACAACAAGCACACACAGCAACTATCATGACAGTTGCTTGCT
GACTCACGATGATTGACTCATGATGATATACGCACAGGTGGAGGAGTACG
GGCCGCCACTGGCGGAGGCCGATCTTGACAGTTACGTAGCGCGCCTCAAG
ATCGAGCTGCAGCCCCTGAACCGCCCCGCGCAGTACTTCTCGGAGAACAC
GTGCCACATCTGCCACAACCGCAAGAAGGACGTCTTCAACTGCTGCTCCA
CGGGCAAGAACAAGCACAACTACTGCGGCTTCCACGTCATCTCCAAGTGA
GTCAGTCAGTGAGGAAGTCAGTGAGTCGAGTGAGTGAGTCAGATGCTGAT
GATTGCACGGACGACCCTGGGATGCGCTCTCCAGTGCTTCGTGCAGCGCC
AGTTTTTGCCTGCATCAACGAATGGTGCACTTGACCACGTACTTGAGGTT
AGGTTTAGGGTGTACCATTCTTGGATACTGTAACGAATTGCTAAGTGCTG
GCTTCGGCGCTAGGGGTATCGGGCAGGTGTGAGCGTGGAAGTGGCGATTT
GAAGTATGTTGCTGTCGCTGTATGAAGTTTGTCGCTCGCTTGAGTATAGG
GTTAGGGTCAGGCGCAGCCACGTTCAAAGGCAGCGCCGCTTACGCCATCA
CCGTCAGAACTCAGCGGCAGCGCGCTGAGGCAGTGTACAGTGCTGAGCGC
TGAGTCAGTGCTCAGCGCTTCGCTCTGAGTCAGTGCTCAGCAACAGCGCT
GAGTCAGTGCTCAGCGGCAGGAACAGAGTCAGCGCTCAGTGCTCTGTTGT
CCATGCAAATGTCGCCGCGATGGCCGTAGGTAGTGGTGATTAGCCATCCG
CGTGGTGTTTCGCGCGCGCGAAGACAGCGATCCCTGCAGTATCGCGTCGC
GTTGCATGCAAGACTCACGTTGAAGCCATGCCGCGCAATGATTGTACACG
GTGGTTTGTAGGCAACCAGGAGTGTTACGTAGCTCTGGTGTAAGCTGGCG
TGCGGTCGCAGGTCTGGTGGGGAGCCTGAGGGGGTCTCAATGCGCACTCG
CTTTCGAAGCAGAAGCACGCACACCCTGCTGGTGCAGTTTGTGCCGCTGT
AGTGCCGTCGTTTCCGCGAGCTTGCGCAAGCGCCGGTGCCGTCCGCTTCG
TGGTCGCTTTGTCACCCACCCCAGCGGGGTAACCGGCTTGTCACTTGCAC
GGCCGTGCTGACCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCAAGT
ACCAGGTTCGGCGTCTGCGTTGTTGCGCAGCTCTCATCGAAAACCCTACT
TGCAACACCTAACCCTGGCCTTACTTCCCGCACATTCGCTCACGTGTATT
TGACACTGCTTCTATGATGTGTGCACGCTCTGCGATGTGCGCGCGCTCTG
CAATTCGTGCGCGCGTCACAATGAGGGCTCCTCACGGGCCTCTGTGGCGT
ATGACGCAGCAAGGTTGTCGCAGCGAACACGCAGTATCACGCGCAGACAA
GCAAGTAAATCTCATTCACCGCATACCCCCGCCGCCTTTATCCCCCTAAT
GCAGCGCCACTACCCCCCCCCCCCCCCCCCCCATCCCCCCCCGCACCGTG
CCCCCGCCGCGTCAGGTTCGGCATTCCCTCCGTCGCGGCGTTGCGCGCCG
ACCCCAGCCTCTGGACGGAGTGCCCCGCGTGCGCGCTCGTGTGCCCGTGC
ACGGCGTGCAACAAGCTGCTGCGCGACTCGGTGCGCCGCGATCGCAAGCT
CAACCCGCACCTCTATCCCGAAACCGTCGAAGCCACCCCCGCCAACGCTG
CCGCCGCTGCCCCTGCCGTCGCTGCCGCCGCCACCCCTGCCGCCGCCGCC
GCCGCCACCGCGCCTCCTGCCGCCACCGCGCCTCCTGCCGCCGCTGCTGC
CGCCCCTGCCGCGGCACCGCAGCCGCTGCCGCCGGCGCCGGCGGCAGCGA
CGGCGCCACCTGCCGCTGCCAGCAGCAGCGCTCCGAGGCAGCAGCAGCCG
ATGGTGCGCGGCGGCCGCGGGCGCGGGCGCGGGCGCGGCTCCGGCAGGCC
CCGCGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCGCTGCCGCAGCTGCTG
CGGAGCGGGACGAGGTGTGGCGCGACGAGGGCCTGCAGTTCTGCGTCGTG
TGCGACGGCAGCCGCGCGCCAAACGTGCGGTGCTGCGCGTGCCCGCGCGC
GTTCCACACGCGCTGCGCGAAGCCCGCGCCGCCGCCGCCGGCGCTGCTGC
TCGGCGGCGGCAGCGGCGCGTGGCGCTGCTGCGACTGCGAGGGGCCGCTG
CGCGGCGGCATCGCGCCGCCGCAGTTCCAGGTGCGCGTTTGTGTGTGTGT
GTGTGTGTGTGGGGGGGGGGGTTGGTAGGGGTACGGGGAGCAGACGCGTC
GGAGCGCATCATGCAGTCAGGGTTACATAAAGTACTATGTAGTAGGGTAG
GTGCGCCAGTATGCATCTTATTTGCTTGTGTAGATGATGTCAGGGTCGGT
GTAGCTGGCTCAGCATGTTTTGTGTGCGCCGCGCGGGCACGCTGTCAGGC
ATCAGAACCTCAAGCATCATAAGTTTGACACATTGAATCAGCCAGACGGG
CCGTTCGACCGTAGCGGCGCGTTGAGCCGTCATTTTATTTGCACTTTCCT
TACCTACGAATGTGCCTACGAATGTACCTACAATTCGAAACTAGGGCCAG
GGCAGACCCACTTCTACATCCGCTCCTGACTTGGACCTACTTAGCTCTTG
AGGCTAGGGTCAGGGCAAACCTACATATCCTATGTTCGGGCAGCGAAGCG
CCGCAGCGGCGGCAGCTGCGTGGCCTACTGCGCAGCACAGGTTTCAAGCC
AAGGTGAGGTTATGGCGCTCGATTGCTGCCTTGCGAGTACTGTGCAAATA
TCTTGGGTTAGGGTCAAGGTTTCATACTTTTGAAGCAAGAACGTGCAAGT
GCGCCGCCCAATGTTCTCTGCAGGAGTTAACAAATTCGCTGCTACTCTCC
CCCTGCACATTGCGCAGGGCACCAACCACCTGCGCGCGTGCCGCGCACTG
CTGTCATTCATGAGGGACAGCGCCTTCGCCAATAACGTGGTGCCACCGCC
ACGTCAAAGCTGAAGTTGACTAACATCAACCTACAACTTCAACAACAACT
TCAAGGATGCCACCCCGCTCTCTCTTCAGGAGCCAACAACTGCGCTGCGA
TCCCCACCTCGTTTGTCACGCAGGGCACTATACCTGCACACGTGCCGCGT
GCTGCTCGACTTCATGACAGCGCCCTCGCGGAACTTCGCGCGCCACCGCC
ACATCAAAGTTGAAGTTGATCAACTTCAACTTCAACAAAAACTTCAACAA
AACTTCAAGTATACTCACAGCTGCGGTGTCGACCCCTTCGCGTTCTTCAC
GCAGGGCACCAACCACCTGCGTGCGTGCCGGACGCTGTTGAAGTTCATGA
CGGACAGCGCCCTCGCGGACAACTTCACGCACCCCGTAACGGCCGACGAC
TTTGGCGCCGCCGCCGCTGCGGAGTGGCTGCGCTACGAGCGCGTGGTGCC
GCCGGACAAGCGCATGGACCTGAGCACTGTGCTGAACAAGCTCAACAGCC
ACCAGTACGGCGTGGAGGGCGACGGAGGTATGTATGTATGTAGACTCTGT
GTGTGTACGTTCGTACTTACCTTAGGTTACTGCCATGTATGTTTTTTTAT
GGCAAGCGTAATTTACTGCCATGTGTGTTTTTTGTTGGCAAGCACATGGA
CCTGAGCACGGTGCTGGCTAAGCTCAACAGCCACCAGTACGGCGTGGATG
GTGACGGAGGTATGTATGTATGTGTGCGTACGTTCGTACTCGCCTTAGGT
TACTGCAGTGTGTTTTTTTATGACAAGTGCATGGAACCTGACCACTGTGC
TCCGTAAGCTATTTCGGAGAGTGTACATCGTGCTTCATGCGTACTTACTT
ACTCTGTAGTCTAGTCCTACTTGGCTGTGCGCCAGTTTCGTGGTGGTGCT
TTCTAAGCTCAACGGCCACCAGTACGGCGTGGAGGGCAACGGAGGTACAT
ACCTACATCCCTGCGTATCTTTGAGAGGCTACCCCATGCTTCATGCGTAC
TTTTGTGGTGTGCCCCAGTCTTGTGGTGGCTTCAAAAGTCACAGCAGCTT
ATCAGGGGCACACGGGTACACCGGAGAGGGGGGGGGGGGCAGGGGTTTAA
AAGGGCAACTGATGTCGCAAAACAGACCATGATGTGTGAGATACATATAT
ACCTCCAGCGCCCTCAATGCCGTACTTATGCCTGCTGAGCTCGGCTTAAG
AATGCAAATACCGCACTCATGCAAACGCTGGAGCGCAAGGACCCACTTCA
CGAAGCACAGCGTGCACGTCCCCCTGCAGGGACTTGTTGCCGTTGCAAGT
GCTATATTTGCTTCCGCTTGAGGGGCGGAAGCCCCCATGACCGCACACCG
TACACAACACATATGCCCCTATTTAGCTCGTGTGTTCCTTAGGGTTAGGG
TTAGGATTAGGGTTAGTTCCTAAGGGTTAGGGTTAGGGTTAGGGTTAAGG
TTAGTTAGGGTTAGGGTTAGGGTTAAGGTTAGTTCCTAACCTTAACCCTG
ACCCTAACCCTAACCCTAACCCTAAGTGTGTTCCGCGCTGAGATAGCTCG
AGCACACACAACCACTCACAAAGCTATCTACAGACAGGGCTCACACGGGG
CCTCCTCCGCCGCTGCCTCCGATTCCACTGCCCGTTCTGCGCTGCGCAGG
CGCCGGCATGAGGCACTTTGTGCGCGACATGCGCCAGATCTGGGTCGCGT
GCTGGACGTTCAACGAGTACGGCAGCGCGCTGTACCGCATCGCTGCGATA
CTGAGCCACTGTGTGGAGGCGTGGTGAGCCCTTCACGAGCGTACCCACAT
ACCTGCACTTCGAGATGCGCTCGAGCACGTGTCGTTAGGAGTGTGCGCGC
ATGTTGTCAAGGAGAACAAGTTCCTGAAGTACGGCAGTGCTCTGTATCGC
ATCGCCGCGATACTGAGACACTGCACTGAGGCATGGTGAGCCCATGTTGT
TCACGAGCATACCTACATACCTTGCGCGCTGAACGTTCAACGAGTACGGC
AGTGCTCTTTATCGCATCGCCGCGATACTGAGCCACTGCACTGAGGCATG
GTAGGCCATGTTGTTCACGAGCATACCTACATACCTCCACTTCAAGATGC
GCTTGAGCTTATGTCTCGAGGGCGCGTGCGTGCATGTCGTCAAGGCCAGC
TTTGCAGGGGGCACAGCCAGATTCTGGCACCAGACTTGAACACCATCGTC
AGAATGTGGGAATGCAGCAACACCAGCCGTATAGGGAGCATGTAACTGAA
CTTAAAACAGCATCTCTATACGCCACTGAACCGCGCACTGCCTTCAATTC
ATGGATGGCCTGCTTCGCACCGGGCTGTGCGCGCTGGCATGCGCAGAATT
CACTGGTAGAGCAGAGAGGAAGGCGACATAGCAGCAGCAGCAGCAGCAGC
ACCATGCAATGCATGTGACCATATCTTTCAGCAGCATCGCCTTATGTGAG
ATACCTCTGTACCAATCTTGCGACCGCCCCGGTCCGCATCGTAGGTACAT
CAGAGGGGGGGGGGCACATGGAGGAGGACGTAGGGGAGGATCCCGAGATG
CCGTTTGGCGGCGGCGGCGTTTGAGTGGTTGTCGTTGAGACACTTTCAGA
CTGTCACACAACATGTAGATTCCGTACAGCAAGCTTCAAGTTAGATGCCA
CTCATCTGTGCTTTGCGACCGCCCCAGTCCGCGTTGTAAGTAGGTATAGC
AGCCTCGTATCTGCCTGGCAGAATTACCAAACACAATGGCCCTAGACTCG
AGGGTCTCCGATTTTCCGTTCATTCCGCATGTTCTTTGTCAAAGCTGCTC
TCGGTTCAGCACCGGGGAGTCGTCAGAGCAGCAGTTTTGTATTTTGAATG
ACTTGAAGTATCGTCGACCTGCACAGCAGCCCCACTCAGTTTCAAGGCAT
TGAGAACGCTGCACCCCCACAGCTACACGGAATGCACTACAGTATTGTTC
TGTCCACCCTTCCCATCAGCAAACAGAGACACCTCTCCGCAATCGCGCCA
GCACCTGCCTGTAAACCTCCCCCCCCCCCCCCCCCCCCCCGCCAAACGAC
CCCCCTCCCCCCTTCCCCCCCCCAATCAACAAAAAACACTACCCACCTTC
TACGCGCGCTTGCACCCACTCTCACGTCCTGCAGGATCGCCAAGACGCTG
CTGCCGATGCTGCGGCCCGACTGCCGCGCCGCCATACAGGCGCTGCCGCC
GCAGCCGCAGCACGCCTGGGCGCCGCCCGCGCTAGCGGCAGCGGCCGCGG
AGCCCATCGCGAAGCGCATGCGGCACCACTGA

Coding sequence (CDS) from alignment at Contig_105:71152..81733+

>mRNA_12714 ID=mRNA_12714|Name=jgi.p|Trimin1|351992|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1830bp|location=Sequence derived from alignment at Contig_105:71152..81733+ (Tribonema minus UTEX_B_3156 )
ATGAGGCACTGCATCATTAAGGTGACGTTCCCCCTGGACGACGACGGCAT
GCACGTCTTCAATGACGAGATTCTGTGGGACTTGCTGAGCGATGGCGCGG
CCACAGCGCTGGACTTTGCAATAACGTGTGCGCGCCGCTACGGCCTCACC
GCGGAGCAGACGGCGGCGCTCGCGGGGGATGTACAGGCGCAGCTTGACAG
GCACCTCGCGCGCGTCCCGCAGAGCGCGCAGCAGCGCTGCCCCACGCTCG
GCACGTACGGGCGCACGCGCACCTCCGGCGGCGGCGGCTTCCTGGAGAGG
GGGGTCGGCGCACGGGGGTCGCGGCCGCGGACCATGGAGGTGGAGGAGTA
CGGGCCGCCACTGGCGGAGGCCGATCTTGACAGTTACGTAGCGCGCCTCA
AGATCGAGCTGCAGCCCCTGAACCGCCCCGCGCAGTACTTCTCGGAGAAC
ACGTGCCACATCTGCCACAACCGCAAGAAGGACGTCTTCAACTGCTGCTC
CACGGGCAAGAACAAGCACAACTACTGCGGCTTCCACGTCATCTCCAAGT
TCGGCATTCCCTCCGTCGCGGCGTTGCGCGCCGACCCCAGCCTCTGGACG
GAGTGCCCCGCGTGCGCGCTCGTGTGCCCGTGCACGGCGTGCAACAAGCT
GCTGCGCGACTCGGTGCGCCGCGATCGCAAGCTCAACCCGCACCTCTATC
CCGAAACCGTCGAAGCCACCCCCGCCAACGCTGCCGCCGCTGCCCCTGCC
GTCGCTGCCGCCGCCACCCCTGCCGCCGCCGCCGCCGCCACCGCGCCTCC
TGCCGCCACCGCGCCTCCTGCCGCCGCTGCTGCCGCCCCTGCCGCGGCAC
CGCAGCCGCTGCCGCCGGCGCCGGCGGCAGCGACGGCGCCACCTGCCGCT
GCCAGCAGCAGCGCTCCGAGGCAGCAGCAGCCGATGGTGCGCGGCGGCCG
CGGGCGCGGGCGCGGGCGCGGCTCCGGCAGGCCCCGCGCCGCCGCCGCCG
CCGCCGCTCCCGCCGCCGCTGCCGCAGCTGCTGCGGAGCGGGACGAGGTG
TGGCGCGACGAGGGCCTGCAGTTCTGCGTCGTGTGCGACGGCAGCCGCGC
GCCAAACGTGCGGTGCTGCGCGTGCCCGCGCGCGTTCCACACGCGCTGCG
CGAAGCCCGCGCCGCCGCCGCCGGCGCTGCTGCTCGGCGGCGGCAGCGGC
GCGTGGCGCTGCTGCGACTGCGAGGGGCCGCTGCGCGGCGGCATCGCGCC
GCCGCAGTTCCAGGGCACCAACCACCTGCGCGCGTGCCGCGCACTGCTGT
CATTCATGAGGGACAGCGCCTTCGCCAATAACGTGGGCACCAACCACCTG
CGTGCGTGCCGGACGCTGTTGAAGTTCATGACGGACAGCGCCCTCGCGGA
CAACTTCACGCACCCCGTAACGGCCGACGACTTTGGCGCCGCCGCCGCTG
CGGAGTGGCTGCGCTACGAGCGCGTGGTGCCGCCGGACAAGCGCATGGAC
CTGAGCACTGTGCTGAACAAGCTCAACAGCCACCAGTACGGCGTGGAGGG
CGACGGAGGCGCCGGCATGAGGCACTTTGTGCGCGACATGCGCCAGATCT
GGGTCGCGTGCTGGACGTTCAACGAGTACGGCAGCGCGCTGTACCGCATC
GCTGCGATACTGAGCCACTGTGTGGAGGCGTGGATCGCCAAGACGCTGCT
GCCGATGCTGCGGCCCGACTGCCGCGCCGCCATACAGGCGCTGCCGCCGC
AGCCGCAGCACGCCTGGGCGCCGCCCGCGCTAGCGGCAGCGGCCGCGGAG
CCCATCGCGAAGCGCATGCGGCACCACTGA