mRNA_12621 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167047
Unique NamemRNA_12621
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 385 bits (988), Expect = 1.520e-135
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC 549
            MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC 183
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.490e-25
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRH-KTNPWERD 369
            M FYQ + T + RT P  LT ++RR    +LE+GG+VR V NHGV+ L YRF ++  +   ++R+ + GRW S Y+DA P    K++  L  +D  +R +T +P  KM+ I++ H ++NPW+ +
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDME 124
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.450e-20
Identity = 43/120 (35.83%), Postives = 78/120 (65.00%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 360
            M FY+ V + K  T  + LT L +++   V+E+GG+VR ++NHG++   +RF+A+     ++ RY+ +GR++S+Y+D+ P TL +++  L M D  LR   +K   K++WI+ +H+ NP+
Sbjct:    1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEKNPY 120
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2MDE9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDE9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.820e-19
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLP 387
            MP Y +V     R PP+++  +  R C  + + GG VR  ENHGV+DL YRFR+    +  E+RY  + R+ S+Y+DA   T   +D  L+M +  LRS T +P   ++ + ++ + N W   A   +P
Sbjct:   15 MPLYHSVIITLERMPPKEMLGMLHRTCFKIFDQGGWVRGCENHGVRDLPYRFRS--PFAPEEDRYQNKARFFSLYYDAPVATKADVDTSLRMNEMVLRSMTFRPKSVLDEVRSKKRGNVWNTMAGIEIP 141
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.730e-19
Identity = 45/121 (37.19%), Postives = 78/121 (64.46%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIS-TRHKTNPW 360
            M FY+ V T K   P   LT+L + + +TV+E+GG+VR V+NHG+++L +RF+A+       NRY+ +GR++S+++DA P  L K++ ++++ D  LR   +K   K+ +I+    K NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYP-DKEGNRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A1Z5JK56_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK56_FISSO)

HSP 1 Score: 89.0 bits (219), Expect = 2.790e-19
Identity = 45/120 (37.50%), Postives = 74/120 (61.67%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 360
            M FY+ V T K       LT L + + + ++E GG+VR V NHG++ L +RF+A T      NRY+++GR+ S+Y+DA P+T+ ++D  LKM +  LRS  ++    +++I+ R   NP+
Sbjct:    1 MVFYECVVTAKNTAHFHTLTNLVKLVSHEIVEGGGIVRAVHNHGIRTLPHRFKA-TYPDREGNRYYSKGRFFSIYYDANPDTMSQVDTILKMDEEVLRSTHLRARSTLDFINLREDRNPY 119
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A448Z259_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z259_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.610e-17
Identity = 36/91 (39.56%), Postives = 62/91 (68.13%), Query Frame = 1 
Query:   88 VLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 360
            V+E+GG++R ++NHG++   +RF+A+     ++ RY+ +GR++S+Y+DA P TL K++  L M D  LR   +K   K++WI+ RH  NP+
Sbjct:    8 VVENGGIIRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISVYYDANPATLKKVENILNMNDQVLRVTHLKSRSKLDWINYRHDKNPY 98
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.630e-17
Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIS-TRHKTNPW 360
            M FY+ V T K   P   LT L + +   V+E GG+VR V+NHG++DL +RF+A+       NRY+ +GR++S+++DA P   +++ A L + +  LR+  +KP  K+ + +    K NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYP-DKEGNRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.030e-16
Identity = 43/121 (35.54%), Postives = 74/121 (61.16%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIST-RHKTNPW 360
            M FY+ V T K       LT   + + + V+E GG+VR V+NHG+++L +RF+AR       NRY+  GR++S+++DA P TL++++ ++++ D  LR   +K   K+ +I+    K NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYP-DKEGNRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120
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BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2V599_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V599_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.050e-16
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 1 
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWE 363
            MP Y    T K     + L +  +     + ++GG+VR VENHG++ L YRFR+R A  G E RY   GR++S +FDA P TL ++D  L + +  LR   +KP   M   +   K N WE
Sbjct:    1 MPLYHQFLTMKPEAASKDLLKTLKACIQVIQKNGGVVRQVENHGIRTLPYRFRSRHASPG-EGRYFYFGRFISTFFDASPTTLKELDDILGLDENMLRRTNLKPKSLME-AARASKHNLWE 119
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835Z0N7_9STRA1.520e-135100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLJ6_ECTSI1.490e-2539.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7FMF6_9STRA2.450e-2035.83Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2MDE9_9STRA1.820e-1934.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2IGM9_9STRA2.730e-1937.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JK56_FISSO2.790e-1937.50Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448Z259_9STRA3.610e-1739.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6T7JZ88_9STRA5.630e-1736.36Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A6S8YXD6_9STRA1.030e-1635.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2V599_9STRA5.050e-1638.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:621821..626028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167047|e_gw1.48.18.1
DescriptionRibosomal protein S6
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2E67R@1|root,2SCYQ@2759|Eukaryota
Evalue2.45e-26
Seed ortholog2880.D8LLJ6
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranslation elongation factor EF1B/ribosomal protein S6
Ec32 orthologEc-04_005610.1
TranscriptId167369
TrackFilteredModels1
ProteinId167047
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167047gene_12621Tribonema minus UTEX_B_3156 geneContig_48 621821..626028 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12621_1exon_12621_1Tribonema minus UTEX_B_3156 exonContig_48 621821..621838 +
exon_12621_2exon_12621_2Tribonema minus UTEX_B_3156 exonContig_48 622734..622883 +
exon_12621_3exon_12621_3Tribonema minus UTEX_B_3156 exonContig_48 623958..624101 +
exon_12621_4exon_12621_4Tribonema minus UTEX_B_3156 exonContig_48 625789..626028 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12621CDS_12621Tribonema minus UTEX_B_3156 CDSContig_48 621821..621838 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167047Trimin1|167047|e_gw1.48.18.1Tribonema minus UTEX_B_3156 polypeptideContig_48 621821..626028 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12621 ID=mRNA_12621|Name=jgi.p|Trimin1|167047|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=552bp|location=Sequence derived from alignment at Contig_48:621821..626028+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGTTTTATCAAAATGTGTTCACCTGCAAGTGGCGCACACCGCCAGA
ACAGCTGACGCGCTTGTACCGGCGTTTATGCAACACGGTCCTAGAGGACG
GAGGCATGGTGCGATGCGTGGAGAACCATGGCGTCAAAGACCTGGCCTAC
CGCTTCAGGGCTAGAACAGCCATGAGCGGCTCGGAGAACCGGTATCACAC
ACGCGGGCGCTGGGTAAGTATGTATTTCGACGCGCGCCCGGAGACGCTGG
ACAAGATCGACGCCGATCTCAAGATGCAGGACTTCTACCTACGGTCAAAC
ACAATCAAGCCGGTGGTCAAGATGAACTGGATATCGACGCGCCACAAGAC
CAACCCCTGGGAGCGCGATGCCACCGACCCCCTCCCCTTCTACATGGTCC
CCTCCAATTCGCTCGCGTACCGTCCCGGCGAAGCGCCGAGCGCTGCTGCG
TACGCCGATTCCGTAACCGACGCGAGCGGTTTCAGGCACGCGGGCTACGT
GCGCATGGCGTCCGAATACCAGGACAGGGAGAAGGTTGAGGTGCGTTGTT
GA
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protein sequence of jgi.p|Trimin1|167047

>Trimin1|167047|e_gw1.48.18.1 ID=Trimin1|167047|e_gw1.48.18.1|Name=jgi.p|Trimin1|167047|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp
MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAY
RFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSN
TIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAA
YADSVTDASGFRHAGYVRMASEYQDREKVEVRC*
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mRNA from alignment at Contig_48:621821..626028+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12621 ID=mRNA_12621|Name=jgi.p|Trimin1|167047|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4208bp|location=Sequence derived from alignment at Contig_48:621821..626028+ (Tribonema minus UTEX_B_3156 )
ATGCCGTTTTATCAAAATGTGAGCAGCCGTGGCGAATGTGCCACAACAAG
GTCGATCACGCTTTGTGGGAGGCTCATGGTTGGAGCATGCTGCAGTACTT
CGCTTTGTACTCATCTGTGTAGTACAGGGAGCCTGGCATATTGATGCAAC
AGCTGCGCATCGTGACTTTGACTGATGCCATTGTTGATCACTGCTCCAGC
TCCTGGAGTTATCTTGTGGAACCTCGTCGAAATCACATCAACGTTAGGCC
TCAAAGTTTCGGCCTCGAGAGCACAATTTCTAAGTCACATGTTGTTGCTG
AAAGGATGGCGAAGCTTTCAGACCCTTTGCGCTGTCCTGCACCATCAAAG
CAGTTATTAAGGTTGCCGGACGGGCATTTCGTTTCTGCGGACACACCAAG
CTCCGCGTTGACGTGACCGAGTTCCCATGTCTTGTCAGATCATCTGAGGC
GATCATGTGCCTGTTGTGGTGATGCCGTGACAGGATCAGCAATTCTCTGT
GTGAAAATTGCATTCAAAGGCAGTTGACACAGTATTGTCATATTGCGGGC
GTAGTTGGTTGCCTTTGCTCCATTCTCTGCGCTGCCTAGACTGCCTGTAT
GCAGCCACAAAAGAACGTGCTTTGCTGCAATCGTGGCGTCAAAGTAAAAC
ACATCACTGCCTTCTGAACGTCTTCTCCACATCTGCTTGTGCTGCAGACA
TTCACGTGCCTCCCAGCTGCACATTTGCGCAATCCATGTTGACTGCGCCG
GTATCAGCTGCCGTCTGCTTCGCACCCTCTGCATCTCAACTCGCACACCC
TCCTCCGCCTCTCACAATCAAATTCATGATCTCAATTGATCATCACACCC
TCCACCCACGCTCACAATCAAATTCGTGATCTTCATTTCATGATTACAAA
CTCATGCTCTTAGGTGTTCACCTGCAAGTGGCGCACACCGCCAGAACAGC
TGACGCGCTTGTACCGGCGTTTATGCAACACGGTCCTAGAGGACGGAGGC
ATGGTGCGATGCGTGGAGAACCATGGCGTCAAAGACCTGGCCTACCGCTT
CAGGGCTAGAACAGTAAGTACTTGAAGTTGAATAAATGCCCTGCCGCGTC
AGCGCCAGGGCGGCAAGTTGCTTAGAGTGTGATTGAAGCACAGCGATTGA
AGTAATGTTTTGAAGTACACCATATGGACCTCATGCCCATCGCCTATGTA
GTGCTTGAGAGCTAGAACATGAGACGCCTGAAGTCACAACCGATGGGGCC
AGGCCTATAGGCCTAATGCCTCAGAGCTGGAATAACAAATGCAACAAGCA
TATGCCACAACAAATTCAGACCCCCACCCCACCCCTCCAGACAGCCCGCA
TTGCATTGCAATGCAGCAAGGGGGTCGCGTGTGTTTACGATGCTGCAGAG
ATCCCAGCGTCGCCCTTTTGTTCAAGCAGGCTCTTCGGCTGCGATACGCT
GAACATGCTAATTCTTCAACATGTTCGTTGCAGGCGTTGACCCTAACCTC
CAGTGGGTGCTGTTGCGTGCCATGTCTAACCCTAACCCTAAGATGGATTA
CTGCTTGCGAGCAAACACACAGGCGGCGTATGCAGACGGCACACGCTCAA
GGCTGGTCAAGCACTTCAGCACCAGGGTGTTTGAAGTTCAAGTATGCGTC
GTGCCGCGTGCTACCCCTGGCACTGCGCCACTCTCCCGTCATGCGGAACG
TGACACTCTTGCAACGCCGCCGCTGCGCAAAGTTGAAGTTCAGCACCTGA
GTTGGCGATCGGCAATCTGTGGCGCGCGCGCCTTGGTCCCAGCATCCGCT
TTCACCATTCAACGTGTACATCATGAAATCCGCCACTCACTTTCGACCCC
ACACGCACAAGAGGCATTCGCGGCTAAGCACACCTTGTCACCTAGAGCTC
TGAGATCTTCTTATTCGTTTCCATGAGTGCGCGCGGCGATTGCGCGCGGG
AGGCATCCACCTTGTCTCTGTGTGCTGTTTTGCCCTCAGCATCAGCTGTG
CGCCTTCACAGTACTTTAAGTACGTGATGAAATGCACCACTCACCAGCGA
CCGAACACGCGCATGAGCGCGCACTGCAATTGCGCGTGGGAGGCACTGAG
TTTGTGTCTGTGTGTGCCGCGCGCGCCGCGTGCGCAGGCCATGAGCGGCT
CGGAGAACCGGTATCACACACGCGGGCGCTGGGTAAGTATGTATTTCGAC
GCGCGCCCGGAGACGCTGGACAAGATCGACGCCGATCTCAAGATGCAGGA
CTTCTACCTACGGTCAAACACAATCAAGCCGGTGAGAACGAAGTGCATTC
GCTGTGAGGTGAAACCGGCAACTCTCTCCTCCTGGGAGGCGACGGGTTCA
ATTTTAGCTGAAAATTGCTGCATGTAAACTTCAACTTGAACTTCAAGTGC
CCCGAGACGCTGGACAAGATCGACGCCGATCTCAAGCTGCAGGACTTCTA
CCTGCGCTCCACTACAAACAAGCCGGTGAGGAGCTGAACTTGAAGTAAAG
AATGGTCGCATGCAAACTTCAACAGACCATCTCAAGCTGCAGAACTCCTA
CCTGCGCTCCACCACAATCAAGCCGGTAAGAATGAAGTGCATAACTGTGT
GGTGAAACCGACAACTCTCGTGCGAGGTGCGCTCCATTACGATCAAGCCG
GTGAGAAGTTTAACTTCAAGTGAAGAGTGGCCGCGCATGTGAACTATAAC
TGACGATATCAAGCTGCAGAACTTCTACCTGCGCTCCACCACAATCAAGC
CGGTGTGGAGTGTAACTAACTTAAAGTGAAGAGTGGCCGCGCATGTGAAC
TTCAACTGAAAACCCAACTGTGCGCATCCACCTGTGTGATTGTCCACTGA
GTGTGTTGATGCAACGCTCCACCATGATCAAGCCCGTTGGTGTTGTGTTA
ACTTCAACTGCCATGAACTTTAACGGTGTCATCGCCTCCCCAAGACGATG
GTGAGAGAGTAGGCGCTCACGCAATTAGCGCATGATCACTCGCTACCGCC
CCGGCCTTCTCGCTATGGGCCAACAGTCTCGCGTTCGTACGCATTTATGT
AGAAAGATAGTAGGTATGTATGTATATTCCGCACATCGGACGCAGCGCTT
CGCTGCTGGTGGGTGCCGCGGTGCCATCGCTGCTGTGAAGTTTATGAAGG
TCTCATGTAGCGGTGTACAGCGGTGTGCGCAGCGTATGCCTGGTTTACAG
AAACGCGGCGGAGCGTGTTGTCGTTGTTGTGTCCTCTCGTGTTTCTGTCG
TGGCAGCAAAGTAGGCGCTGCTTCGCTGTTTATTGTACGATGCCGTTCAG
AGCCGCAGCATTGCCATCTAGTCACCGTGTATGGCCACAAGCAAGCAACA
GTGACATATGCTAGCATGCCCTCTATGGTTCTCATGCCACTCGTCGTTTC
ATGGCGTCTCTGCTGGTAGCCCTGGGGTCAGGGTTTCCTCAGCAAGACAT
TGAATACATCACTGCTGCACGAGTTCTGGTGGTGCTCTGCCCTGGCTGCC
GGCCAGAGGGCTTCCTGTGGGCTGAAAGGTTTTGTTTTTTTTTCCCCTTG
TTGCAACAACCTACCAAGACAACGCTTGTGTGGACCGTGGCATATACATA
CCGTATGCGTATGTATGTACACCGTGGCAACTGCATCGCCACGAGCTCCC
TTGTCCCAGCTTTTGACATCATTACTCTACCTGATGACTCATGACACCAG
CAGTGCCCGAGTGGTACTGAGCTCCCGAACGCTCTCCTCTTAGGGGTAGG
GTTACGGTTAGGGTTAGGGCTAGGGTTACCCTCGACCGCCTCGACGAACA
ACAAACCACATGCAAAAAACAAGCGCTGCAAACAGCACGTTTTCCAGTAA
CAGCGCTCATGCGACGCACGCCAAAAGCACCAAACAACAAAGCGCCATGC
GCAGCGCGCGTTCGCTCCGCCGTTCCCTCCCGCTCACCACCCGCTCCCCT
GCCTTTCCTGCACTGCAGGTGGTCAAGATGAACTGGATATCGACGCGCCA
CAAGACCAACCCCTGGGAGCGCGATGCCACCGACCCCCTCCCCTTCTACA
TGGTCCCCTCCAATTCGCTCGCGTACCGTCCCGGCGAAGCGCCGAGCGCT
GCTGCGTACGCCGATTCCGTAACCGACGCGAGCGGTTTCAGGCACGCGGG
CTACGTGCGCATGGCGTCCGAATACCAGGACAGGGAGAAGGTTGAGGTGC
GTTGTTGA
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Coding sequence (CDS) from alignment at Contig_48:621821..626028+

>mRNA_12621 ID=mRNA_12621|Name=jgi.p|Trimin1|167047|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=552bp|location=Sequence derived from alignment at Contig_48:621821..626028+ (Tribonema minus UTEX_B_3156 )
ATGCCGTTTTATCAAAATGTGTTCACCTGCAAGTGGCGCACACCGCCAGA
ACAGCTGACGCGCTTGTACCGGCGTTTATGCAACACGGTCCTAGAGGACG
GAGGCATGGTGCGATGCGTGGAGAACCATGGCGTCAAAGACCTGGCCTAC
CGCTTCAGGGCTAGAACAGCCATGAGCGGCTCGGAGAACCGGTATCACAC
ACGCGGGCGCTGGGTAAGTATGTATTTCGACGCGCGCCCGGAGACGCTGG
ACAAGATCGACGCCGATCTCAAGATGCAGGACTTCTACCTACGGTCAAAC
ACAATCAAGCCGGTGGTCAAGATGAACTGGATATCGACGCGCCACAAGAC
CAACCCCTGGGAGCGCGATGCCACCGACCCCCTCCCCTTCTACATGGTCC
CCTCCAATTCGCTCGCGTACCGTCCCGGCGAAGCGCCGAGCGCTGCTGCG
TACGCCGATTCCGTAACCGACGCGAGCGGTTTCAGGCACGCGGGCTACGT
GCGCATGGCGTCCGAATACCAGGACAGGGAGAAGGTTGAGGTGCGTTGTT
GA
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