mRNA_1258 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161806
Unique NamemRNA_1258
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835Z592_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z592_9STRA)

HSP 1 Score: 540 bits (1391), Expect = 4.600e-192
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1
Query:  235 AVYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSPPLFQGDYWPGE 993
            AVYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSPPLFQGDYWPGE
Sbjct:   79 AVYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSPPLFQGDYWPGE 331          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835Z7S7_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S7_9STRA)

HSP 1 Score: 401 bits (1030), Expect = 3.930e-139
Identity = 187/202 (92.57%), Postives = 192/202 (95.05%), Query Frame = 1
Query:  241 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELG 846
            YSAEQLPRSD+GDYIEQRVKATQP GTS IAVRL+TNKQLAMVVPPPIRATFCAAARELPGGIV RDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAP CNR RAYIAYVDSIAHWQPCSRRSAAY+EMLVGYIDWVRLR FR VHLWSAPP +GDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIA+ CE LG
Sbjct:    1 YSAEQLPRSDIGDYIEQRVKATQPAGTSPIAVRLVTNKQLAMVVPPPIRATFCAAARELPGGIVQRDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPACNRARAYIAYVDSIAHWQPCSRRSAAYKEMLVGYIDWVRLRSFRRVHLWSAPPQEGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIARGCEALG 202          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835YIA2_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA2_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.030e-85
Identity = 146/287 (50.87%), Postives = 177/287 (61.67%), Query Frame = 1
Query:  238 VYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSEL-------------------------------------PVSPPLFQGDYWP 987
            VYSAE+LPRSDVGD++E RVK TQP     +AVRL++N +LAM+VPPP+ ATF AA    PG      PLP  I Y+SK LC+FQ++NGLWVL F++Y QEY  DAP CNRGRAYI+Y+DS AHWQP S R+AAY+E +V Y DWVR RGF W+HLWSAPP +G SYVLWC P+HQ  P P      LR+WYH++A RC+ LG VR+F  E      SNLY  SF  I +    +                                       PV PP F+GDYWP
Sbjct:  496 VYSAERLPRSDVGDFMELRVKNTQPADAPPLAVRLVSNTKLAMLVPPPVWATFRAA----PG-----QPLPHVIPYSSKALCMFQQINGLWVLCFVMYVQEYSGDAPACNRGRAYISYIDSAAHWQPSSARTAAYKEFVVAYADWVRRRGFGWIHLWSAPPQEGASYVLWCHPEHQATPEPDM----LRRWYHAVASRCQALGIVRNFTAER-----SNLYHASFQVIDNALNAAAADXXXXXXXXXXXXXXXXXXXXXXXXSDMEAAPISIAPPVLPPFFKGDYWP 764          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835YPS5_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS5_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.150e-66
Identity = 112/229 (48.91%), Postives = 146/229 (63.76%), Query Frame = 1
Query:  241 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPS--KGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGI 921
            YSAE+LPRSDVGDY+E+ V++  P G   IAVR ++N Q A  +PPP++ATFCAA    PG       LP +I YTSK LCLFQ ++G WV+ F++YT EYG DAP CNRGR Y++Y+DS+ + QP + RS  Y+ +L  Y DWVR RGF  VHLWSAP S  +  +Y+ WC PQH            LRQWY  IA +C+           GIV+A ++LY +SF  +
Sbjct:    1 YSAEKLPRSDVGDYVERCVQSVLPAGAPPIAVRFVSNCQKATSIPPPMQATFCAA----PGV-----DLPRSILYTSKALCLFQLIDGAWVMSFMLYTYEYGDDAPACNRGRVYLSYLDSVPYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASTLREFAYICWCHPQHHA----TLDQPALRQWYSDIAGQCQL---------RGIVSAVTDLYASSFRAL 207          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835YQL1_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQL1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 9.800e-65
Identity = 109/229 (47.60%), Postives = 143/229 (62.45%), Query Frame = 1
Query:  241 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPS--KGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGI 921
            YSAE+LP SDVGDYIE  V++  P G   IAVRL++N Q A  +PPP++ATFC A    PG       LP +I YTSK LCLFQ +NG WV+  ++Y+ EYG D+P CNRGR Y++Y+DS+ + QP + RS  Y+ +L  Y DWVR RGF  VHLWSAP S  K  +Y+ WC PQH            LRQWY  I ++C+           GI++A ++LY +SF  +
Sbjct:    1 YSAEKLPWSDVGDYIESCVQSVLPAGAPPIAVRLVSNCQKATSIPPPMQATFCTA----PGV-----DLPPSILYTSKALCLFQLINGAWVMSLMLYSYEYGDDSPACNRGRVYLSYLDSVTYIQPYTCRSVVYKTVLAAYFDWVRRRGFSTVHLWSAPASNVKEFAYICWCHPQHHA----TLDQTALRQWYGDIVEQCQR---------RGIISAVTHLYASSFRAL 207          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A835Z778_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z778_9STRA)

HSP 1 Score: 195 bits (495), Expect = 9.010e-59
Identity = 99/138 (71.74%), Postives = 109/138 (78.99%), Query Frame = 1
Query:  238 VYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREM 651
            +YSAEQL RSDV DYIE RVKATQP GTS IAVRL++NK+LAM VPPPI ATFCAA R         DPLP   + TS+ LCL QEVNGLWVLLFI YTQEY ADAP CNRGR YIAY+DS+AH QPCSRR AA++EM
Sbjct:   17 LYSAEQLARSDVSDYIEDRVKATQPAGTSPIAVRLVSNKELAMRVPPPIPATFCAAER---------DPLPARSKCTSQALCLSQEVNGLWVLLFIKYTQEYRADAPPCNRGRVYIAYIDSVAHSQPCSRRVAAHQEM 145          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A059LBA4_9CHLO (Histone acetyltransferase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LBA4_9CHLO)

HSP 1 Score: 150 bits (378), Expect = 3.040e-40
Identity = 87/239 (36.40%), Postives = 129/239 (53.97%), Query Frame = 1
Query:  313 PGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQP-----------CSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSP-PLFQGDYWPGE 993
            P  S   VR++ N    +     ++A F  A           +  P+A  Y  KV+ LFQ ++G+ V LF +Y QEYGADAP  N   AY++Y+DS+ +++P            + R+  Y E+LVGY+ W++ RGF  +++W+ PP  GD Y+L+C P  Q  P  R+    LR+WYH++         +R   +EG+V   SNLYDT FAG    ++L    +   P F+GDYWPGE
Sbjct:    3 PAASEFTVRVVNN----VTKKYDVQARFLEA--------FGPEGAPDAFCYKQKVMLLFQTLDGVDVCLFCMYVQEYGADAPAPNARTAYLSYLDSVKYFRPEDCVSLARPGNLALRTVLYHELLVGYLAWIKARGFLTMYIWACPPLAGDDYILYCHPGRQKTP--RSDR--LREWYHAM---------LRAARSEGVVRYVSNLYDTFFAG-GRDHRLDRPSILHLPYFEGDYWPGE 215          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A836CF44_9STRA (Histone acetyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF44_9STRA)

HSP 1 Score: 150 bits (379), Expect = 7.980e-40
Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  241 YSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDF 861
            Y A+ LP S +  ++E++     P G+ ++ VR++ N + A  VP  ++ATF   A           P P  I YT+K + +FQE++G+WVL F++   EYGADAPL NRGR YI+Y+DS+    PC  R+A ++ +L  Y+D  R RGF   HLW   P +G  Y+   RP HQ  P        L  W  ++A      G   DF
Sbjct:   56 YCAKSLPSSVLDRHLEEQANRLLPSGSPKVVVRMLANTRRAFYVPAQVQATFAVDA-------TGSSP-PPTIPYTAKTIGVFQELDGVWVLFFVLMAHEYGADAPLANRGRVYISYLDSVPFMWPCHARTALFQGVLHAYLDCSRRRGFTKAHLWVCAPGEGSQYLFLQRPPHQKTP----DQKGLEAWNGNMASGAVAAGIATDF 250          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A024TS18_9STRA (Histone acetyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TS18_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.590e-39
Identity = 85/262 (32.44%), Postives = 135/262 (51.53%), Query Frame = 1
Query:  238 VYSAEQLPRSDVGDYIEQRVKAT-----------QPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLPEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSPPLFQGDYWPG 990
            V++A+ LPRS + DY+E+RV              + P T ++ +R ++N +  ++V   +   +  A              P    + SK LC+FQE++G+ VLLF +Y  E+      CN  R Y++Y+DS+ + +P   R+  Y E+L+GY+D+V+ RGF   H+W+ PP KGD Y+L+C P+ Q  P    +   LRQWY  +  R +E G V D          +N+YD  ++           P+  P F+GDYW G
Sbjct: 1045 VWTAKSLPRSKLSDYLERRVAKVMEAEITAEMRKEVPSTDKLIIRQVSNIEKTLMVRDKMYQRYKDAK------------YPSEHRFKSKCLCMFQEIHGVSVLLFGMYVHEFDQQEAKCNSRRVYVSYLDSVNYLEPAYLRTKLYHEILIGYLDYVKQRGFHTAHIWACPPLKGDDYILYCHPETQKTP----KSDRLRQWYIQMLMRAKEEGIVVDI---------NNIYDEYWS------TAQASPMELPYFEGDYWVG 1275          
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Match: A0A485KNG3_9STRA (Histone acetyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNG3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.910e-37
Identity = 81/260 (31.15%), Postives = 134/260 (51.54%), Query Frame = 1
Query:  238 VYSAEQLPRSDVGDYIEQRVKATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPL---------PEAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDSIAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWCRPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLYDTSFAGIVHPYQLSELPVSPPLFQGDYWPG 990
            V++A+ LPRS + D++E+RV        +++    IT++ +     PP           +   ++ RD +         P    + SK +C+FQE++G+ VLLF +Y  E+      CN  R Y++Y+DS+ + +P   R+  Y E+L+GY+++V+ RGF   H+W+ PP KGD Y+L+C P+ Q  P    +   LRQWY  +  + +E G V D          +N+YD  ++        +  P   P F+GDYW G
Sbjct: 1072 VWTAKSLPRSKLSDFLERRV--------AKLLEEEITDEMMQSKDVPPPDKLIIRQVSNIEKNLMVRDKMFQRYKDTKYPSEHRFKSKCICMFQEIHGVSVLLFGMYVHEFDQQEAKCNSRRVYVSYLDSVNYLEPAYLRTKVYHEILIGYLEYVKQRGFHTAHIWACPPLKGDDYILYCHPESQKTP----KSDRLRQWYIQMLLKAKEEGVVVDI---------NNMYDEYWS------TAAASPTELPYFEGDYWVG 1304          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161806 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z592_9STRA4.600e-192100.00Histone acetyltransferase (Fragment) n=1 Tax=Tribo... [more]
A0A835Z7S7_9STRA3.930e-13992.57Histone acetyltransferase (Fragment) n=1 Tax=Tribo... [more]
A0A835YIA2_9STRA1.030e-8550.87Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A835YPS5_9STRA2.150e-6648.91Histone acetyltransferase (Fragment) n=1 Tax=Tribo... [more]
A0A835YQL1_9STRA9.800e-6547.60Histone acetyltransferase (Fragment) n=1 Tax=Tribo... [more]
A0A835Z778_9STRA9.010e-5971.74Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A059LBA4_9CHLO3.040e-4036.40Histone acetyltransferase (Fragment) n=1 Tax=Helic... [more]
A0A836CF44_9STRA7.980e-4037.20Histone acetyltransferase (Fragment) n=2 Tax=Tribo... [more]
A0A024TS18_9STRA3.590e-3932.44Histone acetyltransferase n=2 Tax=Aphanomyces inva... [more]
A0A485KNG3_9STRA1.910e-3731.15Histone acetyltransferase n=1 Tax=Aphanomyces stel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:165999..166991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161806|e_gw1.18.146.1
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
KEGG koko:K04498
EC2.3.1.48
Descriptionhistone acetyltransferase activity
COG categoryBK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5076@1|root,KOG1474@2759|Eukaryota,KOG1778@2759|Eukaryota
Evalue5.89e-40
Seed ortholog157072.XP_008874949.1
Hectar predicted targeting categoryother localisation
TranscriptId162128
TrackFilteredModels1
ProteinId161806
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161806gene_1258Tribonema minus UTEX_B_3156 geneContig_18 165999..166991 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1258_1exon_1258_1Tribonema minus UTEX_B_3156 exonContig_18 165999..166991 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1258CDS_1258Tribonema minus UTEX_B_3156 CDSContig_18 165999..166991 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161806Trimin1|161806|e_gw1.18.146.1Tribonema minus UTEX_B_3156 polypeptideContig_18 165999..166991 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1258 ID=mRNA_1258|Name=jgi.p|Trimin1|161806|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=993bp|location=Sequence derived from alignment at Contig_18:165999..166991- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGGCAGCGGCGGCGGCGGCGATGGCGGCCGCGACGGCGGCGACGG
CGGCGGCGGCGGAGGCAGCAGCGGCGGCAGCGGCAGCGGCGGCGGCGGCG
GCAGCGGCAGCGGCGGTGGCGGCGGCCACGGTGGCATCAGCGTCGGCGGC
GGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGCCGCTTCTGCCGCTGCTGC
TGCCAACGCCGCCGCCGCCGCCGCAGAAGCAGCAGCAGTCTACTCCGCAG
AGCAGCTGCCGCGCTCGGATGTTGGCGACTACATCGAGCAGCGCGTCAAG
GCCACCCAGCCACCGGGCACCTCTCGCATTGCCGTCAGGCTGATTACCAA
CAAGCAGCTGGCGATGGTCGTGCCGCCGCCCATCCGGGCGACGTTTTGCG
CAGCAGCAAGGGAGCTGCCGGGGGGCATCGTGGCGAGGGACCCGCTGCCA
GAAGCCATTGAGTACACCAGCAAGGTGCTCTGCCTCTTCCAAGAGGTCAA
CGGCCTGTGGGTCCTGCTGTTCATCGTGTACACGCAGGAGTACGGGGCGG
ATGCACCGCTGTGCAACCGTGGACGCGCGTACATCGCGTATGTCGACAGC
ATCGCCCACTGGCAACCGTGCAGCAGGCGCTCGGCCGCGTACCGGGAGAT
GCTGGTAGGCTACATCGACTGGGTCCGCCTACGCGGTTTCCGGTGGGTGC
ACCTGTGGAGTGCGCCGCCATCGAAGGGGGACAGCTACGTCCTTTGGTGC
CGCCCTCAGCACCAGCCCCCCCCCCCTCCCAGAACGCAGCACGCGTGGCT
GCGGCAGTGGTACCACTCCATCGCGCAGCGGTGCGAGGAGCTCGGCTGTG
TACGTGACTTCATAAATGAGGGCATCGTAAACGCCGGCAGCAACCTCTAT
GACACCAGCTTCGCAGGCATCGTCCACCCCTACCAGCTCTCGGAGCTGCC
GGTGTCGCCGCCCCTCTTTCAGGGCGACTACTGGCCCGGGGAG
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protein sequence of jgi.p|Trimin1|161806

>Trimin1|161806|e_gw1.18.146.1 ID=Trimin1|161806|e_gw1.18.146.1|Name=jgi.p|Trimin1|161806|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=331bp
MGGSGGGGDGGRDGGDGGGGGGSSGGSGSGGGGGSGSGGGGGHGGISVGG
GSGGGSGGGGAASAAAAANAAAAAAEAAAVYSAEQLPRSDVGDYIEQRVK
ATQPPGTSRIAVRLITNKQLAMVVPPPIRATFCAAARELPGGIVARDPLP
EAIEYTSKVLCLFQEVNGLWVLLFIVYTQEYGADAPLCNRGRAYIAYVDS
IAHWQPCSRRSAAYREMLVGYIDWVRLRGFRWVHLWSAPPSKGDSYVLWC
RPQHQPPPPPRTQHAWLRQWYHSIAQRCEELGCVRDFINEGIVNAGSNLY
DTSFAGIVHPYQLSELPVSPPLFQGDYWPGE
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mRNA from alignment at Contig_18:165999..166991-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1258 ID=mRNA_1258|Name=jgi.p|Trimin1|161806|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=993bp|location=Sequence derived from alignment at Contig_18:165999..166991- (Tribonema minus UTEX_B_3156 )
ATGGGCGGCAGCGGCGGCGGCGGCGATGGCGGCCGCGACGGCGGCGACGG CGGCGGCGGCGGAGGCAGCAGCGGCGGCAGCGGCAGCGGCGGCGGCGGCG GCAGCGGCAGCGGCGGTGGCGGCGGCCACGGTGGCATCAGCGTCGGCGGC GGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGCCGCTTCTGCCGCTGCTGC TGCCAACGCCGCCGCCGCCGCCGCAGAAGCAGCAGCAGTCTACTCCGCAG AGCAGCTGCCGCGCTCGGATGTTGGCGACTACATCGAGCAGCGCGTCAAG GCCACCCAGCCACCGGGCACCTCTCGCATTGCCGTCAGGCTGATTACCAA CAAGCAGCTGGCGATGGTCGTGCCGCCGCCCATCCGGGCGACGTTTTGCG CAGCAGCAAGGGAGCTGCCGGGGGGCATCGTGGCGAGGGACCCGCTGCCA GAAGCCATTGAGTACACCAGCAAGGTGCTCTGCCTCTTCCAAGAGGTCAA CGGCCTGTGGGTCCTGCTGTTCATCGTGTACACGCAGGAGTACGGGGCGG ATGCACCGCTGTGCAACCGTGGACGCGCGTACATCGCGTATGTCGACAGC ATCGCCCACTGGCAACCGTGCAGCAGGCGCTCGGCCGCGTACCGGGAGAT GCTGGTAGGCTACATCGACTGGGTCCGCCTACGCGGTTTCCGGTGGGTGC ACCTGTGGAGTGCGCCGCCATCGAAGGGGGACAGCTACGTCCTTTGGTGC CGCCCTCAGCACCAGCCCCCCCCCCCTCCCAGAACGCAGCACGCGTGGCT GCGGCAGTGGTACCACTCCATCGCGCAGCGGTGCGAGGAGCTCGGCTGTG TACGTGACTTCATAAATGAGGGCATCGTAAACGCCGGCAGCAACCTCTAT GACACCAGCTTCGCAGGCATCGTCCACCCCTACCAGCTCTCGGAGCTGCC GGTGTCGCCGCCCCTCTTTCAGGGCGACTACTGGCCCGGGGAG
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Coding sequence (CDS) from alignment at Contig_18:165999..166991-

>mRNA_1258 ID=mRNA_1258|Name=jgi.p|Trimin1|161806|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=993bp|location=Sequence derived from alignment at Contig_18:165999..166991- (Tribonema minus UTEX_B_3156 )
ATGGGCGGCAGCGGCGGCGGCGGCGATGGCGGCCGCGACGGCGGCGACGG
CGGCGGCGGCGGAGGCAGCAGCGGCGGCAGCGGCAGCGGCGGCGGCGGCG
GCAGCGGCAGCGGCGGTGGCGGCGGCCACGGTGGCATCAGCGTCGGCGGC
GGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGCCGCTTCTGCCGCTGCTGC
TGCCAACGCCGCCGCCGCCGCCGCAGAAGCAGCAGCAGTCTACTCCGCAG
AGCAGCTGCCGCGCTCGGATGTTGGCGACTACATCGAGCAGCGCGTCAAG
GCCACCCAGCCACCGGGCACCTCTCGCATTGCCGTCAGGCTGATTACCAA
CAAGCAGCTGGCGATGGTCGTGCCGCCGCCCATCCGGGCGACGTTTTGCG
CAGCAGCAAGGGAGCTGCCGGGGGGCATCGTGGCGAGGGACCCGCTGCCA
GAAGCCATTGAGTACACCAGCAAGGTGCTCTGCCTCTTCCAAGAGGTCAA
CGGCCTGTGGGTCCTGCTGTTCATCGTGTACACGCAGGAGTACGGGGCGG
ATGCACCGCTGTGCAACCGTGGACGCGCGTACATCGCGTATGTCGACAGC
ATCGCCCACTGGCAACCGTGCAGCAGGCGCTCGGCCGCGTACCGGGAGAT
GCTGGTAGGCTACATCGACTGGGTCCGCCTACGCGGTTTCCGGTGGGTGC
ACCTGTGGAGTGCGCCGCCATCGAAGGGGGACAGCTACGTCCTTTGGTGC
CGCCCTCAGCACCAGCCCCCCCCCCCTCCCAGAACGCAGCACGCGTGGCT
GCGGCAGTGGTACCACTCCATCGCGCAGCGGTGCGAGGAGCTCGGCTGTG
TACGTGACTTCATAAATGAGGGCATCGTAAACGCCGGCAGCAACCTCTAT
GACACCAGCTTCGCAGGCATCGTCCACCCCTACCAGCTCTCGGAGCTGCC
GGTGTCGCCGCCCCTCTTTCAGGGCGACTACTGGCCCGGGGAG
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