mRNA_12554 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171099
Unique NamemRNA_12554
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A835YMY0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY0_9STRA)

HSP 1 Score: 788 bits (2036), Expect = 1.440e-287
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 1 
Query:    1 MADIDDILASGSYGASSKDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEGEGADVPEVGGVHTKVSLVWYYSWGYVYMYFEVR 1239
            MADIDDILASGSYGASSKDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEGEGADVPEVGGVHTKVSLVWYYSWGYVYMYFEVR
Sbjct:    1 MADIDDILASGSYGASSKDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEGEGADVPEVGGVHTKVSLVWYYSWGYVYMYFEVR 413
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A6G0XJ35_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ35_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.970e-58
Identity = 134/371 (36.12%), Postives = 206/371 (55.53%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEI-KSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEGEGADVPE 1161
            K KDV V+MLDYD+V  C D+  L+ I+  L+SG++G Y  L +  ESRLL+VLP  E AR++ M+  PS  +V +    L  W   +  T   + ++R+   R  +PPPR       G     AP  +      S+  +  ++ Q IS YD++AWEKFD +AAE ELD+EE     ++R ++E   +Q   ++ E  ++   +DV A+S  +R+V + RE+QKGNE FRA ++E A + Y+RS+                 D +      A+ + NRA+  +K+  L  AE+DC +A+ LDP+Y KAW RRG+AR RRG+Y  AV DF EA++L  +  +V++      L  K+ +    V+G  +   E
Sbjct:   17 KHKDVDVDMLDYDYVAKCSDVDTLKNILVVLRSGKEGRYPQLEEAVESRLLQVLPPSETARIMRMKATPSESDVHAEIQALAAWETQMAHTSEALDEARKLSNRSLLPPPR-----GGGHVACTAPVSSERQPKESTPATQKKSKQTISAYDWRAWEKFDVEAAERELDQEEINRRDEARRQQEAIAEQKAKKRLEAAAMPASVDVEAMSNAERQVCAHREKQKGNESFRAGDNEDAIIFYSRSLVF---------------DPTS-----AIVHANRALVHLKVKNLSSAEEDCTAAIELDPKYFKAWSRRGMARFRRGKYAEAVADFEEALRLDPSNREVQK------LLEKTKSKWASVDGTSSAAAE 356
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: H3GH21_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH21_PHYRM)

HSP 1 Score: 202 bits (514), Expect = 5.510e-57
Identity = 123/338 (36.39%), Postives = 198/338 (58.58%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKS----RQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKL 1053
            K K + VEMLDY FV+ C D+  L+GI+  L+SG++G Y  L K  E+R+L++LP +ER +++ MR+GP+ +E+ +    L  W     A + ++K+    RQ   ++++PP R      + +SE       R     +      + S+ I  YDF++WEK+D D A  ELD+E E+   ++R +RE+ ++++ +R+ E+ES+ + +++  L    R+V +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  +++     AEDDC  A+ LDP Y+K W RRG+ R+RRG+Y  +V DF EA++L
Sbjct:   18 KPKTIDVEMLDYGFVERCADLDELKGILATLRSGKEGRYPDLEKTTENRILDLLPDRERNKILRMRSGPTTNELTTEIDELSHW-----AAEMDLKNDALMRQAPIKRELPPVRGQQAPGDSESEL-----ARSPTKMAPDKCDQKKSKAIPAYDFRSWEKYDVDKALVELDEESERAKEQARKQREEQEKRVASRKRELESLPKSVELDMLQPETRKVYAGYEKQKGNDCFKANELEMALLHYTRSMAY------------DDTD--------AILYANRALVHLRMKNFAAAEDDCARAILLDPGYMKGWSRRGMTRYRRGKYAESVQDFKEALRL 325
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A024U721_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U721_9STRA)

HSP 1 Score: 201 bits (512), Expect = 8.930e-57
Identity = 136/372 (36.56%), Postives = 204/372 (54.84%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQR-ISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEME----SVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEGEGAD 1152
            K K+V V+MLDY++V SC DI LL+ I+  LKSG++G Y  L    E RL+EVLP  E+ R++ M+  PS  ++ +  A L  W   + A  AE+ + +    + VPPPR       G   +  PA    ++   ++   P+  ++ I  YD++AWEKFD +AAE ELD E+ +    +R    Q Q++L ARQA       ++   +DV A+S+ +R V +  E+QKGNE FR+ +++ A   Y+RS+A                D S      A+ + NRA+  +KL  L  AEDDC  AL  DP+Y KAW RRG+ R RRG+Y  A++DF  A++L        Q+ +++ L  K+     EV+G  AD
Sbjct:   17 KSKEVDVDMLDYEYVASCSDIDLLKNILVVLKSGKEGRYPQLEAAVEERLMEVLPPSEKQRILRMKARPSEADIHNETASLTTWEAQMAAKSAELDAARKMSHRSVPPPR-------GSEISGGPATAVRLSTKQAATPVPKREKKAIHAYDWRAWEKFDVEAAERELDMEDVRRKEMAR----QQQEELAARQARKRLDDAAMPASVDVDAMSSAERDVCAALEKQKGNEAFRSGDNDDAVRAYSRSLAF---------------DPSS-----AVVFANRALVHLKLKNLSSAEDDCTMALRRDPRYFKAWSRRGMTRFRRGKYEDAISDFEVALQLEP------QNREIQKLLQKTKEKWAEVDGTKAD 351
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: W2PRY6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PRY6_PHYPN)

HSP 1 Score: 196 bits (499), Expect = 5.970e-55
Identity = 123/335 (36.72%), Postives = 192/335 (57.31%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSE-APAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKL 1053
            K K + VEMLDY FV+ C D+  L+GI+  L+SG++G Y  L K  E R+L VLP +ER ++  MR GP+A+E+ +    L  W   +   +  +K RQ   ++++PP R        +SE   AP       + S+  +  + ++ I  YDF++WEK+D D A  E+D+E E+   ++R+++    ++  AR+ E+ES+ + +D+  L    R++ +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  +++     AEDDC  A  LDP Y+K W RRG+ R+RRG+Y  +V DF EA++L
Sbjct:   18 KPKTIDVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPDLEKATEDRILAVLPERERTKITRMRCGPTANELTTEIDELASWAAAMDVKNEALK-RQTPFKRELPPVRGQKSSREMQSEWVRAPT-----KLASTKKAEQKKAKTIPAYDFRSWEKYDVDKALDEIDQESERAREQARMQQXXXXKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAY------------DDTD--------AILYANRALVHLRMKNFATAEDDCTRATLLDPAYMKGWSRRGMTRYRRGKYAESVQDFEEALRL 326
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A3R7JAD7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JAD7_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.190e-54
Identity = 122/335 (36.42%), Postives = 190/335 (56.72%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGT-RGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKL 1053
            K K + VEMLDY FV SC D+  L+GI+  L+SG++G Y  L K  E R+L +LP KER++++ MR+GP+  E  +    L  W   +   +  +K RQ   ++ +PP R           AP P  T   + V   S    + S+ I  YDF++WEK+D D A  E+D++  +   ++ ++RE+ +++  AR+ E+E++ + ++++ L    R+V +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  ++      AEDDC  A+ LDP Y+K W RRG+ R+RRG+Y  +  DF EA++L
Sbjct:   26 KKKTIDVEMLDYGFVKSCSDLDDLKGILAMLRSGKEGRYPELEKATEDRILTILPEKERSKIIRMRSGPTTSEKSTEIDELTSWSAVMDLKNEALK-RQAPIQRNLPPVRGQA--------APGPVQTDTELYVADKS---EKKSKAIPAYDFRSWEKYDVDKALEEIDEDSTRAREQAIIQREEQEKRAVARKKELEALPKSVELAKLEPETRKVYAAYEKQKGNDCFKANELEMALLHYTRSMAY------------DDSD--------AILYANRALVYLRTKSFAAAEDDCSRAIRLDPLYMKGWSRRGMTRYRRGKYAESAQDFEEALRL 328
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A6A3TEZ8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TEZ8_9STRA)

HSP 1 Score: 195 bits (495), Expect = 4.770e-54
Identity = 130/378 (34.39%), Postives = 209/378 (55.29%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPA-PAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAM----------KLAEAAGDVKQHAQLKALRNKSLASLREVEGEGAD 1152
            K K + VEMLDY FV+ C D+  L+GI+  L+SGR+G Y  L K  E R+L VLP +ERA+++ MR+ PS +E+ +    L +W   +   +  +K RQ   ++++PP R      + +S+    P+            S  + S+ I  YDF++WEK+D D A  E+D+E E+   +++ +RE+ +++  AR+ E+ES+ + +++  L    R++ +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  ++L     AEDDC  ++ L+P Y+K W RRG+ R+RRG Y  +V DF EA+          KL +AA D  +        N++L  ++   G+G +
Sbjct:   20 KPKTIDVEMLDYGFVERCSDLDELKGILATLRSGREGRYPDLEKATEDRILAVLPERERAKILRMRSEPSKNELTTETDELTNWAAAMDLKNEALK-RQTPIQRELPPVRGQKSSEDTQSKLVRDPSNVEK--------SEQKKSKAIPAYDFRSWEKYDVDKALGEIDEESERAREQAKHQREELEKRAAARKRELESLPKSVELQKLEPETRKLYAGYEKQKGNDCFKANELEVALLHYTRSMAY------------DDTD--------AILYANRALVYLRLKNFAAAEDDCTRSILLNPGYMKGWSRRGMTRYRRGNYAESVKDFQEALRLEPTNREVTKLLKAAMDKHEEVNGALSSNQTLLPVKNDPGDGEE 368
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A833RNG1_PHYIN (Tetratricopeptide repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RNG1_PHYIN)

HSP 1 Score: 194 bits (492), Expect = 9.940e-54
Identity = 121/335 (36.12%), Postives = 189/335 (56.42%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSE-APAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKL 1053
            K K + VEMLDY FV+ C D+  L+GI+  L+SG++G Y  L K  E R+L V P +ER +++ MR+GP+ +E+ +    L +W   +   +  +K +Q   ++++PP R        +S+ A APA    +               I  YDF++WEK+D D A  E+D E E+   ++R ++E+ +++  +R+ E ES+ + +D+  L    R++ +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  +K      AEDDC  A+ LDP Y+K W RRG+ R+RRG+Y  +V DF EA++L
Sbjct:   37 KPKTIDVEMLDYSFVERCTDVDELKGILAVLRSGKEGRYPDLEKATEDRILAVFPERERTKILRMRSGPTDNELTTEIDALANWAVAMNVKNEALK-KQTPFKRELPPVRGRKSSIEMRSDLARAPAKLANVEKDEQK----MAKNAIPAYDFRSWEKYDVDKALEEIDHEGERARDQARKQQEEQEKRAASRKREFESLSKSVDLDKLQPETRKMYAGYEKQKGNDCFKANELEVALLHYTRSMAY------------DDTD--------AILYANRALVYLKTKNFAAAEDDCARAILLDPTYMKGWSRRGMTRYRRGKYAESVQDFEEALRL 346
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A329S0A8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S0A8_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.920e-53
Identity = 122/334 (36.53%), Postives = 194/334 (58.08%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKL 1053
            K K + VEMLDY FV+ C D+  L+GI+  L+SG++G Y  L K  E R+L VLP +ER++++ MR+GP+A+E+ +    L +W   +   +  +K RQ   ++++PP R        +SE    A T+   + S+  +  + ++ I  YDF++WEK+D D A  E+D+E E+   ++R       ++  AR+ E+ES+ + +D+  L    R++ +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  +++     AEDDC  A+ LD  Y+K W RRG+ R+RRG+Y  +V DF EA++L
Sbjct:   18 KHKSIEVEMLDYGFVERCTDLDELKGILAMLRSGKEGRYPGLEKATEGRILAVLPDRERSKILRMRSGPTANELTTEIDELANWAAAMDVKNEALK-RQTPIKRELPPVRGQKSSGEIQSEL-VRAPTK---LTSAEKAEQKKTKAIPAYDFRSWEKYDVDKALEEIDQESERAREQARKXXXXXXKRAAARKRELESLSKSVDLEKLQPETRKLYAGYEKQKGNDCFKANELEMALLHYTRSMAY------------DDTD--------AILYANRALVHLRMKNFAAAEDDCTRAILLDLTYMKGWSRRGMTRYRRGKYAESVQDFEEALRL 326
[Close]
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Match: A0A662XBT6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBT6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.170e-52
Identity = 125/363 (34.44%), Postives = 203/363 (55.92%), Query Frame = 1 
Query:   52 KDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKSGRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQDWHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAVGSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVEREQAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQESEQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMKLDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMKLAEAAGDVKQHAQLKALRNKSLASLREVEG 1140
            K K + V+MLDY FV+   D+  L+GI+  L+SG++G Y  L +  E RLL VLP +ER ++  MR+GPS+ E  +    L +W   +   +  +K RQ   ++++PP R     +   S     + T    V ++  S  + S+ I  YDF+AWEK++ D A  E+++ E Q  +++++++E+ ++++ AR+ E+E++ + + +  L +  R+V +  E+QKGN+CF+A E E A +HYTRS+A             DD D        A+ Y NRA+  ++      AEDDC  A+ LDP Y KAW RRG+ R+RRG+Y  +  DF +A++L   + +V Q      L  K+     EV G
Sbjct:   21 KKKAIDVDMLDYRFVEQSSDVDELKGILAMLRSGKEGRYPDLERATEDRLLAVLPERERNKIQRMRSGPSSTECMTEGDELANWAAAMDLKNEALK-RQASVQREMPPVRGQAPSAVADSALLRASAT----VSAAEKSDQEKSKAIPAYDFRAWEKYNVDEALKEIEQGEAQARNQAKLQQEEQEKRVAARKKELEALPQSVVLEKLESETRKVYAGHEKQKGNDCFKANELEMALLHYTRSMAY------------DDSD--------AILYANRALVYLRTKSFAAAEDDCSRAILLDPLYTKAWSRRGMTRYRRGKYADSAQDFEKALQLEPGSREVMQ------LLKKAQEKHEEVNG 352
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171099 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMY0_9STRA1.440e-287100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0XJ35_9STRA1.970e-5836.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
H3GH21_PHYRM5.510e-5736.39Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A024U721_9STRA8.930e-5736.56Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W2PRY6_PHYPN5.970e-5536.72Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A3R7JAD7_9STRA2.190e-5436.42Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6A3TEZ8_9STRA4.770e-5434.39Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A833RNG1_PHYIN9.940e-5436.12Tetratricopeptide repeat n=1 Tax=Phytophthora infe... [more]
A0A329S0A8_9STRA1.920e-5336.53Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A662XBT6_9STRA5.170e-5234.44Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:541772..545568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171099|e_gw1.78.120.1
BRITEko00000,ko03036
KEGG koko:K19870
DescriptionTetratricopeptide repeat
COG categoryS
Max annot lvl4776|Peronosporales
EggNOG OGsCOG0457@1|root,KOG1124@2759|Eukaryota,3Q98A@4776|Peronosporales
Evalue9.03e-58
Seed ortholog164328.Phyra75184
Hectar predicted targeting categoryother localisation
TranscriptId171421
TrackFilteredModels1
ProteinId171099
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171099gene_12554Tribonema minus UTEX_B_3156 geneContig_78 541772..545568 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171099Trimin1|171099|e_gw1.78.120.1Tribonema minus UTEX_B_3156 polypeptideContig_78 541772..545568 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12554_1exon_12554_1Tribonema minus UTEX_B_3156 exonContig_78 541772..542332 +
exon_12554_2exon_12554_2Tribonema minus UTEX_B_3156 exonContig_78 542461..542525 +
exon_12554_3exon_12554_3Tribonema minus UTEX_B_3156 exonContig_78 542953..543018 +
exon_12554_4exon_12554_4Tribonema minus UTEX_B_3156 exonContig_78 543614..543890 +
exon_12554_5exon_12554_5Tribonema minus UTEX_B_3156 exonContig_78 545296..545568 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12554CDS_12554Tribonema minus UTEX_B_3156 CDSContig_78 541772..542332 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12554 ID=mRNA_12554|Name=jgi.p|Trimin1|171099|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1242bp|location=Sequence derived from alignment at Contig_78:541772..545568+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGATATCGACGACATCCTTGCATCTGGCAGCTACGGCGCCAGCTC
CAAGGACAAGGATGTTACCGTAGAAATGCTAGACTACGATTTCGTCGACA
GCTGCCAGGATATACAGCTGCTGAGAGGCATTATACGCCGCCTGAAGAGC
GGTAGGGACGGCCACTATGAGGCACTCACCAAACACGCCGAGAGCCGGCT
GCTGGAGGTTCTGCCTGTGAAGGAGCGTGCTCGTGTTGTCGCCATGCGAA
CTGGCCCCAGCGCCGATGAAGTGGAGAGTGCAGCAGCCGGATTGCAGGAC
TGGCATGACAATATACAAGCTACGGATGCTGAGATAAAGAGTCGTCAGGG
CCAGGGGCGACAGCAAGTGCCTCCACCACGGTTTGTGGTATGCGACAGCA
ATGGCAAGAGCGAAGCACCTGCACCCGCCGGCACTCGCGGAATTGCAGTT
GGCAGCAGCAGCGGCAGCACACCACAGACTTCGCAGCGGATAAGCGGTTA
CGACTTCAAGGCGTGGGAGAAGTTCGATCCTGACGCTGCAGAGGCAGAGC
TCGACAAAGAGGAGGAGCAGCTGCTGAGTAAAAGCAGGGTTGAACGCGAG
CAGGCACAGCAGCAGCTCGAAGCGCGGCAGGCAGAGATGGAGTCAGTGCT
CAGAGGCATGGACGTGTCAGCGCTGTCCGCCGTGCAGCGCAGAGTGTCCT
CCGAGCGCGAGCGGCAGAAGGGCAACGAGTGCTTCCGCGCGCAGGAGAGC
GAGCAGGCGTACGTGCACTATACGCGCAGCATCGCGCTGCTCGGCGATAT
AAACTTCAACTTGAAGTTGAGCGCTGACGACGGCGATGGCAGCGAGCAGC
GGCGGCTGCTGGCCATGGCCTACTGCAATCGGGCCGTTGCGGGCATGAAG
CTGGATAGGCTGCAGCAGGCGGAGGACGACTGCGGCAGCGCGCTTGGTCT
GGATCCGCAGTACCTCAAGGCCTGGATGCGACGCGGCGTGGCACGTCACA
GGCGGGGTAGGTATAGAGCGGCAGTTACCGACTTTGGTGAGGCAATGAAG
CTGGCAGAGGCTGCAGGAGATGTGAAGCAGCACGCACAGCTCAAGGCGCT
GAGAAACAAGAGCCTGGCCAGCCTGAGGGAGGTGGAAGGGGAGGGGGCAG
ACGTGCCAGAGGTGGGGGGGGTGCATACCAAGGTGAGTTTGGTCTGGTAC
TATAGTTGGGGATATGTATACATGTACTTTGAAGTTAGGTAG
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protein sequence of jgi.p|Trimin1|171099

>Trimin1|171099|e_gw1.78.120.1 ID=Trimin1|171099|e_gw1.78.120.1|Name=jgi.p|Trimin1|171099|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=414bp
MADIDDILASGSYGASSKDKDVTVEMLDYDFVDSCQDIQLLRGIIRRLKS
GRDGHYEALTKHAESRLLEVLPVKERARVVAMRTGPSADEVESAAAGLQD
WHDNIQATDAEIKSRQGQGRQQVPPPRFVVCDSNGKSEAPAPAGTRGIAV
GSSSGSTPQTSQRISGYDFKAWEKFDPDAAEAELDKEEEQLLSKSRVERE
QAQQQLEARQAEMESVLRGMDVSALSAVQRRVSSERERQKGNECFRAQES
EQAYVHYTRSIALLGDINFNLKLSADDGDGSEQRRLLAMAYCNRAVAGMK
LDRLQQAEDDCGSALGLDPQYLKAWMRRGVARHRRGRYRAAVTDFGEAMK
LAEAAGDVKQHAQLKALRNKSLASLREVEGEGADVPEVGGVHTKVSLVWY
YSWGYVYMYFEVR*
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mRNA from alignment at Contig_78:541772..545568+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12554 ID=mRNA_12554|Name=jgi.p|Trimin1|171099|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3797bp|location=Sequence derived from alignment at Contig_78:541772..545568+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATATCGACGACATCCTTGCATCTGGCAGCTACGGCGCCAGCTC
CAAGGACAAGGATGTTACCGTAGAAATGCTAGACTACGATTTCGTCGACA
GCTGCCAGGATATACAGCTGCTGAGAGGCATTATACGCCGCCTGAAGAGC
GGTAGGGACGGCCACTATGAGGCACTCACCAAACACGCCGAGAGCCGGCT
GCTGGAGGTTCTGCCTGTGAAGGAGCGTGCTCGTGTTGTCGCCATGCGAA
CTGGCCCCAGCGCCGATGAAGTGGAGAGTGCAGCAGCCGGATTGCAGGAC
TGGCATGACAATATACAAGCTACGGATGCTGAGATAAAGAGTCGTCAGGG
CCAGGGGCGACAGCAAGTGCCTCCACCACGGTTTGTGGTATGCGACAGCA
ATGGCAAGAGCGAAGCACCTGCACCCGCCGGCACTCGCGGAATTGCAGTT
GGCAGCAGCAGCGGCAGCACACCACAGACTTCGCAGCGGATAAGCGGTTA
CGACTTCAAGGCGTGGGAGAAGTTCGATCCTGACGCTGCAGAGGCAGAGC
TCGACAAAGAGGTACTACAAATATTGTGTAGTAACACCCGGCTTCCTGTC
ACTTCGCAACGATCGCCTTCACATGGGTGATCCCTATACTGTTTCTGATC
GAGTCTGACTCGCTGCTTTTCTACTTGCAGCAACATGAGGAGGAGCAGCT
GCTGAGTAAAAGCAGGGTTGAACGCGAGCAGGCACAGCAGCAGCTCGAAG
CGCGGTAAGTGGTATGGGTGTGTACTGTGTGTACTGTTCACTGTGCTGTG
CTGTCTGTACTGTTCACTGTGCCCCCTGTAGTGTAATTGCTGGTGTGCTG
CCGCTGCCGCCCGTTTGCGCCTACCAGGTAGCACCCGTCCAAGCCGCAAA
ATACTTTTCAAGTCGCGATTTCCTGTGTACTTTGAATTCGGTTTTTGTGC
GCATTTAGTGCATTAAACATTTGAATTAGGGATATGAACTTCGAAACTAC
TTGGAGGGTTAGGGCTAGGGTTAGGGCTAGCAGATGGCGCCATTCACATG
TGTGAGTTTAATGCCTGCGGATCTGAATCTACTTGCAGTGGCAACCGCCA
ATGCGCCAAGCGGTTGACTCACCAAGCACCCCCTTCAAACGCACTTGTTG
GTGCTCATGGAACCAGGCGGCAGCAGCGCAGGCAGGCAGAGATGGAGTCA
GTGCTCAGAGGCATGGACGTGTCAGCGCTGTCCGCCGTGCAGCGCAGGTA
CAGATTCATGACTTGTTGAAGTTGGATGAGCGTTGAAGTTTATGGGGCTG
TTGAAGTTGCGCTTTCTGGCGCAGTGTGCATGAGCTGCTGACACACTGCA
ACCACTGCATTGGAGAATTGCTGCCTGGTTGCAGTGCATATATATGCTGT
CTTTGTGCCCGCCAGACGTGACTTTTCTTTGAATGCAAGTTTCTTGTATG
CATGGATGAGATGTGCACATGAGTGCAAATTGATGCTTGCTGACCTGGTG
CAGACAGTGCCATGCATAACAGCGCACTTGCGGAGGTATGTGTGCGTCTT
TCTTACGTGAACGCATTCATCTGCCTTGGGAGCAAACTCATAGGTCGGGG
CCTCTAGTACACGCCAGCTGCAAGTGCAGTATGCATTGCATGTAAGCGCC
CTCATCCGTACGGCACAGCAAACCTGACTCCCAATGTGACGGCTCTCTCA
CTCACCTGAACTATGCATGTACTTATGTATGCAGAGCGTTGTTCTGACCA
ATTGTGACAGCTCATTCATCATCAACACTTTTGAAGTATATACTAGAGGT
GCACCCGTGTACTTGTTATCACCCGTGTACTCATGTATGCAGAGTGTCCT
CCGAGCGCGAGCGGCAGAAGGGCAACGAGTGCTTCCGCGCGCAGGAGAGC
GAGCAGGCGTACGTGCACTATACGCGCAGCATCGCGCTGCTCGGCGATAT
AAACTTCAACTTGAAGTTGAGCGCTGACGACGGCGATGGCAGCGAGCAGC
GGCGGCTGCTGGCCATGGCCTACTGCAATCGGGCCGTTGCGGGCATGAAG
CTGGATAGGCTGCAGCAGGCGGAGGACGACTGCGGCAGCGCGCTTGGTCT
GGATCCGCAGTACCTCAAGGTATGTACGTATACGTAGGCAGGAGTACCTT
AAGGTATGTACGTATATGCAAGGCATGAAGCTGGACAGGCTGCAGCAGGC
GGAGGACGACTGCGGCAGCGCTCTGAGTCGAGATCTGCAGTACCCTAAGG
TATGTATGTATATAAAGGCAGAAGGTATGTACGTATATGTAGGCGGAGGA
CGACTGCGGCAGCGCTCTGAGTCTGGATCCGCAGTACCTCAAGGCATGTA
TGCAATACTATGCATGTACATGTATGCGCGTGCTACTGGGGGTATGGGTT
GAGTAGATAGGTAGGTGCTACAGGCGGCGGTAACTGCGGCAATGCGCTTT
CAGGATAATGAAGGTCGGCCTCTGAATGTGTCAGCGAGTGCAGTAGCAAA
TGGTGGCACTTACCCTAACCCTAGTCCTAAGCGGCGCTTGCCACCCTAGC
GCAAGTTGAAGGTGAGCGCTGGTGTACGAAACGAGCAGGCGCTGAATCCG
GCCTCACTGTAACAGTGTAACTCACAGATATGCTGACAGTATGCATGCAA
GATTTGCAGTTGCGTTGACAAGACAACTCATCTAATTTGATTGAGGTTCA
AATGCCGTAAAGTAATCACGAGACAGATGTTCACAAGACAACTCATCTAA
TTTGATTGAGGTTCAAATGCCGCAGAGTAATCACGAGACAGACGTTCACA
AGACAACTCATCTCGATTTGATTGAGGTTCAAATGCCGTAGAGTAATCAT
GAGACAGACATTCATGACTGCTCTGATACAAACACATGACTCCAGCTGAT
CCCTGCATGTTTGTTTGCCGACTGCTCATAGAAGGCATGTTAAAACATAC
GTTTTGACAGCCATGGCGGCACCAGGCACAGAGAAGAAAGAACCGTGCAG
GGTTAGGGTTAGGGTTAGGGTTAGGGTTAAGGGTTAGGGTTAGGTTTAAG
CTTGCAGCTCAGCGCTTGCAGTGGCGCTCCGGTATACGCTCATGCGTGTA
CTCATGTTACATACCTACATACCAGGTGCCATTGACCACTGCACACTTGC
TTGTGCTAGAGCAACTTGAGGGTGAAGGTTTCAATGAGATTAAGGCGCAT
GGGCGTAGGGTTACAGTCAGGACAAGGTCGGTATAGTGCGCGGCGCAAAG
CAGCATTGGTGACTCTCCTTCTTCAAGTTCCTGCCTGGCACACATGCACA
GCACATGCACAGGTCCACTCACACCACTGATACTGTGCAATGTGCCGTCG
TCCCTGATGCTGACACCCCAACACCAATCCTGTATCCTTGCCCTAGGCCT
AGCTGCTACCCTAACACCGACCCCCCCTGTTTCAACTTGCAAACCCTAAC
ACCAATCCCAACACCAACCCTTAGTTTACCTAACCCTAACCCCACACTTA
ACCCTAACCCTAATTCTCTTCTAGGCCTGGATGCGACGCGGCGTGGCACG
TCACAGGCGGGGTAGGTATAGAGCGGCAGTTACCGACTTTGGTGAGGCAA
TGAAGCTGGCAGAGGCTGCAGGAGATGTGAAGCAGCACGCACAGCTCAAG
GCGCTGAGAAACAAGAGCCTGGCCAGCCTGAGGGAGGTGGAAGGGGAGGG
GGCAGACGTGCCAGAGGTGGGGGGGGTGCATACCAAGGTGAGTTTGGTCT
GGTACTATAGTTGGGGATATGTATACATGTACTTTGAAGTTAGGTAG
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Coding sequence (CDS) from alignment at Contig_78:541772..545568+

>mRNA_12554 ID=mRNA_12554|Name=jgi.p|Trimin1|171099|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1242bp|location=Sequence derived from alignment at Contig_78:541772..545568+ (Tribonema minus UTEX_B_3156 )
ATGGCTGATATCGACGACATCCTTGCATCTGGCAGCTACGGCGCCAGCTC
CAAGGACAAGGATGTTACCGTAGAAATGCTAGACTACGATTTCGTCGACA
GCTGCCAGGATATACAGCTGCTGAGAGGCATTATACGCCGCCTGAAGAGC
GGTAGGGACGGCCACTATGAGGCACTCACCAAACACGCCGAGAGCCGGCT
GCTGGAGGTTCTGCCTGTGAAGGAGCGTGCTCGTGTTGTCGCCATGCGAA
CTGGCCCCAGCGCCGATGAAGTGGAGAGTGCAGCAGCCGGATTGCAGGAC
TGGCATGACAATATACAAGCTACGGATGCTGAGATAAAGAGTCGTCAGGG
CCAGGGGCGACAGCAAGTGCCTCCACCACGGTTTGTGGTATGCGACAGCA
ATGGCAAGAGCGAAGCACCTGCACCCGCCGGCACTCGCGGAATTGCAGTT
GGCAGCAGCAGCGGCAGCACACCACAGACTTCGCAGCGGATAAGCGGTTA
CGACTTCAAGGCGTGGGAGAAGTTCGATCCTGACGCTGCAGAGGCAGAGC
TCGACAAAGAGGAGGAGCAGCTGCTGAGTAAAAGCAGGGTTGAACGCGAG
CAGGCACAGCAGCAGCTCGAAGCGCGGCAGGCAGAGATGGAGTCAGTGCT
CAGAGGCATGGACGTGTCAGCGCTGTCCGCCGTGCAGCGCAGAGTGTCCT
CCGAGCGCGAGCGGCAGAAGGGCAACGAGTGCTTCCGCGCGCAGGAGAGC
GAGCAGGCGTACGTGCACTATACGCGCAGCATCGCGCTGCTCGGCGATAT
AAACTTCAACTTGAAGTTGAGCGCTGACGACGGCGATGGCAGCGAGCAGC
GGCGGCTGCTGGCCATGGCCTACTGCAATCGGGCCGTTGCGGGCATGAAG
CTGGATAGGCTGCAGCAGGCGGAGGACGACTGCGGCAGCGCGCTTGGTCT
GGATCCGCAGTACCTCAAGGCCTGGATGCGACGCGGCGTGGCACGTCACA
GGCGGGGTAGGTATAGAGCGGCAGTTACCGACTTTGGTGAGGCAATGAAG
CTGGCAGAGGCTGCAGGAGATGTGAAGCAGCACGCACAGCTCAAGGCGCT
GAGAAACAAGAGCCTGGCCAGCCTGAGGGAGGTGGAAGGGGAGGGGGCAG
ACGTGCCAGAGGTGGGGGGGGTGCATACCAAGGTGAGTTTGGTCTGGTAC
TATAGTTGGGGATATGTATACATGTACTTTGAAGTTAGGTAG
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