mRNA_12386 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835YNS8_9STRA (Putative flagellar basal body protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS8_9STRA) HSP 1 Score: 558 bits (1437), Expect = 3.640e-200 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVRKL 843
MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVRKL
Sbjct: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVRKL 281
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: D8LF14_ECTSI (Putative: flagellar basal body protein [Chlamydomonas reinhardtii] n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF14_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 1.780e-138 Identity = 197/284 (69.37%), Postives = 235/284 (82.75%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSK------AAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGV 834
MVV+ +KRSDTD FL E+T +ESNDALVRRL ++WNTR+RLM LV + R++ ++GP KP AEHG+DE+KE+YEG ++KG +Y PDPTGKRTGNGV PQL ET+E VC DAE + K A ++E LDEK+DNIRGAVTMA+PMGLP FDPVRL IEG EGL+GT A E++DE+TAGLWMAGKEFRRDQ V DR+GKNEKT+ CKLQ+ G+GPP REP VSE+ERKAMMAFYFKRQEE+K+LAEANDDDYL SAWADP+QLQ+SLRGTG + APGV
Sbjct: 1 MVVVQVKRSDTDVFLVESTITESNDALVRRLVKIWNTRLRLMQLVESARDMGKYGPSKPPAEHGLDEVKEEYEGASIDKGPYYHPDPTGKRTGNGVGPQLCETLEGVCVDAEALLGKEQAQRRVAVTQEALDEKMDNIRGAVTMAFPMGLPEFDPVRLTIEGG--EGLEGTQAGTEILDEETAGLWMAGKEFRRDQLVGDRVGKNEKTRIMCKLQKPGSGPPGREPGVSEDERKAMMAFYFKRQEELKRLAEANDDDYLASAWADPKQLQRSLRGTGTVRAPGV 282
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7S2UZF3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZF3_9STRA) HSP 1 Score: 344 bits (883), Expect = 8.980e-116 Identity = 176/286 (61.54%), Postives = 222/286 (77.62%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQV-NKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVS------KAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVR 837
MVV++IKRSDTD FL E TC+E+ND L+ +L + NTRV++ L GAVR L ++GP KP + G+DE+++++ + ++GEFY DPTG RTG GV PQL+ET+ERVC DAE A+S + AA++E LD+K+ NIRGAVTMAYPMGLP +D VR +E +G + L+GT QE++D +TA LW AGKEFRR Q V+DR+G NEKTK KLQ+SGAG P REPAVSE+ERKAMMAFYFKRQEE+KKLAEANDDDYL SAWADP+ LQ+ LRG G+I APGV+
Sbjct: 1 MVVIHIKRSDTDQFLFETTCTETNDNLIAKLVAIQNTRVKIRALAGAVRALGKYGPMKPPDQQGLDEVEDKFGEKPIPDRGEFYEADPTGIRTGEGVGPQLVETLERVCADAEQAISVNQVQLRIAATQENLDDKVANIRGAVTMAYPMGLPDYDVVRQLLE-EGAQALEGTQPGQEVLDPETAQLWGAGKEFRRGQCVSDRLGMNEKTKMVAKLQQSGAGAPAREPAVSEDERKAMMAFYFKRQEEIKKLAEANDDDYLASAWADPKSLQRGLRGVGSIKAPGVK 285
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7S2C740_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C740_9STRA) HSP 1 Score: 340 bits (871), Expect = 5.560e-114 Identity = 174/285 (61.05%), Postives = 216/285 (75.79%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVS------KAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVR 837
MVV IK+S+ D FL EA+ E+ND L+ LAR+WN R+RL LVGA+REL+++GP KP+ E GID +KEQYEG + K E Y+ DP G RTGNG PQL ET+ERVC DAE A+S + S + LD+KL N++GAV MAYPMGLP +D V LA+ G EGLDGT A ELMD +TA LW+A ++F+R Q V DR+G NEKTK KLQ++G+GPP REP VSEEERKAMMA YFKRQE++KKLAEA+DDDYL S+WADP+ ++KSL+GTGAI APG+R
Sbjct: 1 MVVFVIKKSNDDQFLYEASVQETNDDLIAGLARVWNKRLRLGLLVGAIRELSKYGPMKPQDEAGIDTLKEQYEGAAMEKSEHYQADPAGVRTGNGPGPQLAETLERVCSDAEAALSANLVKQRTPVSMDLLDDKLANMQGAVMMAYPMGLPAWDTVALALAGD--EGLDGTQASAELMDPETATLWVASRDFQRGQKVGDRLGWNEKTKVVAKLQKTGSGPPAREPVVSEEERKAMMAHYFKRQEDLKKLAEASDDDYLASSWADPKAMKKSLQGTGAIKAPGLR 283
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7S2WGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGM0_9STRA) HSP 1 Score: 333 bits (854), Expect = 2.120e-111 Identity = 171/285 (60.00%), Postives = 213/285 (74.74%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVS------KAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVR 837
MVV +IK D FL EA+ +SND L+RRLA +WNTR+R+ LVGAVRELA+ GP KP+ + GID IKEQYEG V K Y DP+G RTGNG QL ET+ERVCQDAE ++S + A S E ++KL NI+GAV MAYPMGLP +D V LA+ G +EGLDGT A +++D +TA LW+A ++F+RDQ + DR+G NEKTK KLQ+ G+GPP REPAVSEEERKAMMA YFKRQEEMK++AEA DD+YL S+WADP+ LQ+SLRG G + APG++
Sbjct: 1 MVVFHIKNGQQDGFLIEASVQDSNDELIRRLAEVWNTRLRVGLLVGAVRELAKFGPMKPQEDQGIDGIKEQYEGAAVEKSAEYVADPSGLRTGNGPGAQLAETLERVCQDAEDSLSPNLVKQRTAVSMELFNDKLANIQGAVMMAYPMGLPSWDTVALALGG--LEGLDGTPAAADVVDPETATLWVASRDFQRDQKIGDRLGWNEKTKVVAKLQKEGSGPPAREPAVSEEERKAMMAHYFKRQEEMKRMAEAQDDEYLASSWADPKALQRSLRGQGQVRAPGLK 283
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A6V1QYW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYW4_HETAK) HSP 1 Score: 319 bits (818), Expect = 6.570e-106 Identity = 164/286 (57.34%), Postives = 207/286 (72.38%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVS------KAAASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGVRK 840
MVV+++K+S+TD FL E CSE+NDAL+ +L + NTRVRL L GA+R+LA++GP KP + G+DEIKE++EGV + KGEFY+PDPTG RTGNGV P L +T E+VC DAE A++ + A ++ LDEKL N RGAVTMAYPMGLP +D VRL +EG ++GL+G+ A E+++ A LW AGKEFRR Q VADR+G+NEKTK KLQ+ G GPP RE AVS +K+LAEA+DDDYL SAWADP+QLQK LRG GA+ APGVRK
Sbjct: 1 MVVIHVKKSETDQFLYETNCSETNDALIEQLVHISNTRVRLRCLAGALRQLAEYGPMKPMDQQGLDEIKEEHEGVAIEKGEFYKPDPTGMRTGNGVGPTLTQTFEQVCADAEAAINVEQVRRRVATTQAALDEKLANCRGAVTMAYPMGLPEWDTVRLLLEG--VQGLEGSQAGLEVLEPAAAELWGAGKEFRRGQLVADRVGRNEKTKLVAKLQKPGDGPPAREAAVSXXXXXXXXXXXXXXXXXLKRLAEADDDDYLNSAWADPKQLQKGLRGVGAVRAPGVRK 284
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A6U4FW40_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FW40_9STRA) HSP 1 Score: 310 bits (793), Expect = 4.060e-102 Identity = 158/287 (55.05%), Postives = 206/287 (71.78%), Query Frame = 1
Query: 1 MVVLNIKRSDT--DSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKA------AASKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAG-PPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAISAPGV 834
MV+++IK D F+ E++ +ND L+ ++ +WN R+RL L GA+ +LA HGP KP + G+DEI+E+Y G +++GEFY PDP G RTGNGV PQL +T E V DA A+ A A S E L+EKL N+RGAV MA+PMGLP FD V L +E +GL+GT+A Q ++D TA LW AG+EF+R Q V DR+G+NEKTK CKLQ+ AG PP REP +SEEERKAMMA YFK+QEEMKKLAEA++DDYL S+WADP+ LQ++LRG G++ APG+
Sbjct: 1 MVLVHIKTGGEAGDEFIVESSVENTNDELIAQIVHVWNLRLRLGQLCGAMMDLAAHGPMKPNDQQGLDEIQEKYSGASIDRGEFYAPDPNGMRTGNGVGPQLTQTFEAVVADARTALDPALARRRQACSAEDLEEKLANMRGAVVMAFPMGLPEFDTVALTLESA--DGLEGTAASQAVLDPATATLWCAGREFQRGQLVKDRVGRNEKTKVVCKLQKGDAGGPPGREPGISEEERKAMMAHYFKKQEEMKKLAEADEDDYLNSSWADPKALQRNLRGMGSVRAPGL 285
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7S3NND6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NND6_9STRA) HSP 1 Score: 302 bits (773), Expect = 4.360e-99 Identity = 161/287 (56.10%), Postives = 201/287 (70.03%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAASK------EQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRG-TGAISAPGVRK 840
MVV+++K D FL E CS D L++ L + N RV+L YL GA+R+LA++GP KP E GIDEIKE+ E + + K E Y DP+G RTGNGV Q+ E VC +AE+ +SK A E LD+KL N+RGAVTMAYPMGLP FDPV LA+E ++GL GT A++ L+D TA LW AGKEF R TV R+G+NEKTK KLQ+ GAGPP REP VSE ERKAMMA YFKRQEE+K LAEANDDDYL S+WA+P+ L+ SL+G + +I APG+ +
Sbjct: 1 MVVIHVKFGQEDEFLYETNCSVGCDELIKNLVLINNRRVQLAYLSGALRDLARYGPIKPNDEQGIDEIKEKMENIIIEKSENYTADPSGIRTGNGVGEQMTSVFEDVCTEAELYISKNQAKMRKALTIEGLDDKLANMRGAVTMAYPMGLPKFDPVYLALES--IDGLAGTQAEKALLDPTTAQLWCAGKEFNRATTVGQRLGQNEKTKVVAKLQKPGAGPPAREPVVSENERKAMMAHYFKRQEELKALAEANDDDYLASSWANPKALKSSLQGLSDSIVAPGIAR 285
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7R9U8T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8T6_9STRA) HSP 1 Score: 299 bits (765), Expect = 7.110e-98 Identity = 156/280 (55.71%), Postives = 201/280 (71.79%), Query Frame = 1
Query: 1 MVVLNIKRS--DTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYEGVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAASKEQ------LDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGA 816
MV++++K + ++D F+ EA+ +SN+ L+ ++ +WN R+RL L GA+ +LA HGP KP E GIDEIKEQYE + KGEFY DP G R GNGV PQL +T ++V +DAE +S A K Q L EKL+ +RGAV MA+PMGLP FD V LA+E +GL GTS ++D +TA LW AG+EF+R + V DR+G+NEKTK CKLQR G G P REP +SE+ERKAMMA YFK+QEEMK+LAEA+DD+YL S+WADP+QLQKSLRG A
Sbjct: 9 MVLIHVKCTGENSDEFIVEASVEDSNEELIGKVVEIWNLRLRLGLLCGAMLDLAAHGPMKPSEEQGIDEIKEQYEEAVIEKGEFYSADPNGCRNGNGVGPQLSDTFQQVVRDAEAGLSPDLARKRQAVKIEDLKEKLETMRGAVMMAFPMGLPEFDIVALALESA--DGLAGTSVGNSVLDAETATLWCAGREFQRGEFVKDRVGRNEKTKVICKLQRPGGGAPGREPGISEDERKAMMAHYFKKQEEMKRLAEADDDEYLHSSWADPKQLQKSLRGMTA 286
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A7S2SFB0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SFB0_9STRA) HSP 1 Score: 287 bits (735), Expect = 3.820e-93 Identity = 149/283 (52.65%), Postives = 198/283 (69.96%), Query Frame = 1
Query: 1 MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVRELAQHGPYKPEAEHGIDEIKEQYE----GVQVNKGEFYRPDPTGKRTGNGVSPQLMETIERVCQDAEMAVSKAAA------SKEQLDEKLDNIRGAVTMAYPMGLPLFDPVRLAIEGKGMEGLDGTSAQQELMDEDTAGLWMAGKEFRRDQTVADRIGKNEKTKATCKLQRSGAGPPCREPAVSEEERKAMMAFYFKRQEEMKKLAEANDDDYLGSAWADPRQLQKSLRGTGAI 819
MVVL +KRSD D FL E +C SND ++R L ++WN RV+ L GA+ ELA++GP KPE+E G+DEI++Q + G + ++G+ Y PDPTG RTG SPQL E +++V +DA+ +S A ++E L+EKL I+GAVTM +PMGLP +DP+R+A+E E ++ ++ +TA LW AGKEF R+QT+ DR+GKNEK K KLQ G+G P REPAVSE+ERKAMMA YF++ EEMKKLAE N DDYL S+WAD QL++SL GTG I
Sbjct: 17 MVVLVVKRSDKDQFLFETSCGASNDVVIRTLVKIWNMRVKTELLAGALEELAKYGPAKPESEKGLDEIQDQAQVAEGGAKPDRGKGYTPDPTGNRTGEAPSPQLQEVLKKVAEDAKQCISNAQVRQKVPLTEELLEEKLQTIKGAVTMTFPMGLPAYDPIRMALED---EAHSKEIYGEQQLNPETAQLWFAGKEFLRNQTIGDRVGKNEKCKIIAKLQNPGSGAPAREPAVSEDERKAMMAQYFRKTEEMKKLAENNADDYLHSSWADSSQLKRSLNGTGDI 296
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A836CAL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL3_9STRA) HSP 1 Score: 1690 bits (4376), Expect = 0.000e+0 Identity = 876/876 (100.00%), Postives = 876/876 (100.00%), Query Frame = 1
Query: 1 MAQFEESFVERLYWEFGDSVLLPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWGQVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIMEGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPDNHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGLPAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQAPLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEPVAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPTGQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKPRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYPWEEGDGXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXLLLVLPPLAPVDNMDVDE 2628
MAQFEESFVERLYWEFGDSVLLPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWGQVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIMEGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPDNHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGLPAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQAPLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEPVAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPTGQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKPRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYPWEEGDGXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXLLLVLPPLAPVDNMDVDE
Sbjct: 1 MAQFEESFVERLYWEFGDSVLLPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWGQVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIMEGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPDNHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGLPAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQAPLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEPVAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPTGQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKPRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYPWEEGDGXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXLLLVLPPLAPVDNMDVDE 876
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA) HSP 1 Score: 790 bits (2041), Expect = 3.470e-268 Identity = 456/848 (53.77%), Postives = 557/848 (65.68%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWK---------PRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYP 2451
VERL FG + + G PS TR + T+LRT+ER L + V LR+KT++C L VLHRH L I + +Q+ +DY+GKVRHLASLL+NYIC W L Q FP A + FF+ CL C+VQGAG G Q+P S RFQ+LC+ S LQAL P RL E+F YVA MATAA TYI H +RR IT WAL ALR HIM + PDT+VDM V P TR+VH+LA LVTTY G D LQ LN GFRG E+DD+G+VQEG DY I DICE VR LPD + A+ RRHLA LQ+ YV R +YQ++M LFE +PDD AAR +RDA+WGL P PKLTAPLPRF+ + AF R D+T +G L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q AP LV +F TDG+QLKLLLVTS S GPHGLT+LP G+QVGY + L DV+EG +GVFRL++VHRE+GAEP VA G AQERL A+D + VTGVDPGQVLA S V A G++WRR++AAD ++P G+ V A E+SG YR WALS+RNE+GE RR AN Y +A ALAD HTRTG +VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP RRQ PPGWK PRR+RR HR+WR R RR++FFG AR P+RGR SIP K +V QLACR P ++TPE +++ C CG TR GG + HRNRVC + C + +A G G+ V NRD + N+G+RGV A GV DIIPGYP
Sbjct: 5 VERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQP----FPDATQRFFMECLTCYVQGAGAGYTNGEGPGAAQLPPSTLQRFQDLCHNSNLQALQATWPPWRLHEVFLYVAKDMATAAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPLTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRHLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVLPKLTAPLPRFKPQPAFIRIDRTGLGELFPGLAAWMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTELPRRGHQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPEGEGVTAQEMSGADYREWALSVRNEEGEVQRRGANQAYGNALAALADRHTRTGHYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPFRRQHRPPGWKRVRSRGLRYPRRRRR--HRRWRDTHRRPRRIIFFGACARFPSRGRASIPIKKLVAQLACRCPTLITPEPYSSASCLVCGGPTRGGGDKLRHRNRVCKNE----DCALAQAAEG----GVAVINRDTNARANLGMRGVYATCGVADIIPGYP 838
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA) HSP 1 Score: 751 bits (1940), Expect = 1.940e-249 Identity = 438/820 (53.41%), Postives = 535/820 (65.24%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKPRRQR-RQKHRK------WRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRD 2373
VERL FG + + G PS TR + T+LRT+ER L + V LR+KT++C L VLHRH L I + +Q+ +DY+GKVRHLASLL+NYIC W L Q FP A + FF+ CL C+VQGAG G Q+P S RFQ+L N S LQAL P RL E+F YVA MAT A TYI H +RR IT WAL ALR HIM + PDT+VDM V PFTR+VH+LA LVTTY G D LQ LN GFRG E+DD+G+VQEG DY I DICE VR LPD + A+ RR LA LQ+ YV R +YQ++M LFE +PDD AAR +RDA+WGL P PPKLTAP+PRF+ + AF R D+T MG L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q AP LV +F TDG+QLKLLLV+S S GPHGLTKLP GYQVGY + L DV+EG +GVFRL++VHRE+GAEP VA AQERL A+D + VTGVDPGQVLA S V A G++WRR++AAD ++P G+ V A EV G YR WALS+R E+GE RR AN Y+DA ALAD HTRTG +VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP+R Q PPGWK R R RQ R+ WR RR RR++FFG AR P+ GR +IP K +V QLACR P +MTP+ +++ C CG+ TR GG E GHRNRVC + C + +A G G+ V +RD
Sbjct: 748 VERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQP----FPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFHALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVPPKLTAPVPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVSSHDSHQGPHGLTKLPRRGYQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADVTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPPPKGEGVTAQEVPGADYREWALSVRKEEGEAQRRGANQAYSDALAALADRHTRTGRYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPIRLQHRPPGWKRVRARGRQYPRRRXXXXXWRDTRRRPRRIIFFGACARFPSHGRAAIPIKKLVAQLACRCPTLMTPQPYSSASCLVCGQPTRGGGDEFGHRNRVCRNEN----CALAQAAEG----GVAVIDRD 1555
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835Z9D2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D2_9STRA) HSP 1 Score: 716 bits (1849), Expect = 7.240e-242 Identity = 436/847 (51.48%), Postives = 533/847 (62.93%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGLPAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWK---------PRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYP 2451
VERL FG + + G PS TR + T+LRT+ER L + V LR+KT++C L VLHRH L I + +Q+ +DY+GKVRHLASLL+NYIC L Q FP A + F++ CL C+VQGAG G Q+P S RFQ+L + S LQAL P RL E+F YVA MAT A TY H +RR IT WAL ALR HIM + PDT+VDM V PFTR+VH+LA LVTTY G D LQ LN GFRG E+D++G+VQEG DY I DICE VR LPD + A+ RR LA LQ+ YV R +YQ++M LFE +PDD AAR +RDA+WG P K A+C P+LQA G + +R P A+ A++TT ++RTNHYARSE+GVM+AI A Q AP LV +F TDG+QLKLLLVTS S GPHGLTKLP GYQVGY + L DV+EG +GV RL++VHRE+GAEP VA G AQERL A+D + VTGVDPGQVLA S V A G++WRRENAAD ++P G+ V A EV G YR WALS+RNE+GE RR AN Y+DA ALAD HTRTG +VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP RRQ PPGWK PRR+RR HR+WR R RR++FFG AR P+RGR SIP K +V QLACR P ++TPE +++ C CG TR GG E GHRNRVC + C + +A G G+ V +RD + N+G+RGV A GV DIIPGYP
Sbjct: 5 VERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTRKLDLGQP----FPDATQRFYMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYTEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDNDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWG---PSK------------AYCPP---------PQLQAPAG---VHPHRP--NPWAKAANITTTRQRTNHYARSERGVMRAIERAGQPRYRILAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTKLPRRGYQVGYINEELGDVLEGEVAEGPNGVSRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEGEGVTAQEVPGVDYREWALSVRNEEGEAQRRGANQAYSDALAALADMHTRTGRYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPFRRQHRPPGWKRVRSRGREYPRRKRR--HRRWRDTHRRPRRIIFFGACARFPSRGRVSIPIKKLVAQLACRCPTLITPEPYSSASCLVCGGPTRGGGDEFGHRNRVCRNEN----CALAQAAEG----GVAVIDRDTNARANLGMRGVYATCGVADIIPGYP 808
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835YXL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL0_9STRA) HSP 1 Score: 635 bits (1639), Expect = 1.000e-213 Identity = 395/831 (47.53%), Postives = 487/831 (58.60%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWGQVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKPRRQR-------RQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGA-EHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGY 2448
VERL FG + + G PS TR + T+LRT+ER L + V LR+ T++C L VLHRH L I + +Q+ +DY+GK+ PAS RFQ+L + S LQAL P RL E+F YVA MAT A TYI H +RR IT WAL ALR HI + PDT+VDM V PFTR+VH+LA LVTTY G D LQ LN GFRG E+DD+G+VQEG D+ I DICE VR LPD + ++ RR LA LQ+ YV R +YQ++M LFE +PDD AR RDA+WGL P PPKLTAPLPRF+ + AF R ++T MG L L A M G W FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q AP LV + TDG+QLKLL VTS S GPHGLTKLP GYQ +VHRE+GAEP VA G AQERL A+D + VTGVDP QVLA S V A G++WRRENAAD V++P G+ V A EVSG YR WALS+RNEQGE RR AN Y++A ALAD HTRTG +VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP+R Q PPGWK R R +++HR+WR R RR++FFG AR PA GR +IP K +V QLACR P ++TPE +++ C CG R A G + R P+ +A G G+ V +RD + N+G+RGV A GV D I GY
Sbjct: 5 VERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGTDQGVQLRHNTVSCSLAKVLHRHPSLDITQTLQDAADYVGKL--------------------------------------------------PASTHQRFQDLRHNSNLQALQAPWAPWRLHEVFLYVAKDMATVAKTYIEVHFQRRRLAITYWALFQALRAHITNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGGLQARLNQLGFRGAELDDDGDVQEGADHLKILDICETVRHLPDGDSDSSKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDATARREHRDAVWGLLPVPPKLTAPLPRFKPQPAFIRINRTGMGELFSGLAARMAGRGPWWCAKFMQPWAKAANITTMRQRTNHYARSERGVMRAIERAGQPGYRILAPWLVDRTVMTDGHQLKLLPVTSHDSHQGPHGLTKLPRRGYQ----------------------RVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPDQVLAFSAVTALGQRWRRENAADFVANPPPEGECVTAQEVSGADYRVWALSVRNEQGEAQRRGANQAYSNALAALADRHTRTGRYQVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGREYPCRKRRHRRWRDTHRRPRRIIFFGACARFPAGGRAAIPIKKLVAQLACRCPTLITPEPYSSASCLVCGGGPRGAAAMSSGTETGFAGT----RTAPLAQAAEG----GVAVIDRDTNARANLGMRGVYATCGVNDSILGY 755
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835YJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ56_9STRA) HSP 1 Score: 666 bits (1719), Expect = 5.540e-213 Identity = 384/699 (54.94%), Postives = 464/699 (66.38%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDI-TRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWKP 2028
VERL FG + + G PS TR + T+LRT+ER L + V LR+KT++C L VLHRH L + + +Q+ +DY+GKVRHLASLL+NYIC W L Q FP A + +F+ CL C+VQGAG Q+PAS RFQ+L N S LQAL RL E+F YVA MAT A TYI H +RR I T WAL ALR HIM + PDT+VDM V PFTR+VH+LA LVTTY G D Q LN GFRG E+DD+G+VQEG DY I DICE VR LPD + A+ R LA LQ+ YV R +YQE+M LFE +PDD AAR +RDA+WGL P PPKLTAPLPRF+ + AF R D+T MG L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q AP LV +F TDG+QLKLLLVTS S GPHGLT+LP GYQVGY + L DV+EG +GVFRL++VHRE+GAEP VA G AQ+RL A+D + VTGVDPGQVLA S V A G++WRR+NAAD ++P G+ V A EVSG YR WA S+RNEQGE RR AN Y+DA ALAD HT TG +VL +CT + +H DAM+ ELL+ R+ QRFS FRAQQ A A++AE +AP RRQ PPGWKP
Sbjct: 281 VERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEMAQTLQDAADYVGKVRHLASLLANYICTWKLHHGQP----FPDATQRYFMECLTCYVQGAGAAYTNGAGPGAAQLPASTLQRFQDLRNNSNLQALQATWAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAIITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGEPQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKHRLLAQLQQLYVETDRTDYQELMSGLFEQFPDDAAARRENRDAVWGLLPVPPKLTAPLPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVMRAIERASQPGYRVLAPWLVDRTFMTDGHQLKLLLVTSHDSHQGPHGLTELPRRGYQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVAGGTPAAQDRLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDNAADFAANPPPEGEGVTAQEVSGAEYRVWAQSVRNEQGEAQRRGANQAYSDALAALADRHTSTGRYQVLRAYCTTWGQHADAMWGELLNPARRHQRFSRFRAQQAAIAKMAEKLAPFRRQHRPPGWKP 975
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835ZEL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL6_9STRA) HSP 1 Score: 630 bits (1624), Expect = 7.010e-211 Identity = 397/886 (44.81%), Postives = 491/886 (55.42%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWGQVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQA------PLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIE-----------------------------------------------------VLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWK---------PRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGYP 2451
VERL FG + + + G PS T + T+LRT+ER L + V LR+KT++C L VLHRH L I + +Q+ +DY+GK A GA W RL E+F YVA MAT A TYI H +RR IT WAL ALR HIM + PDT+VDM V PFTR+VH+LA LVTTY G D LQ L+ GFRG E+DD+G+VQEG DY I DICE VR LPD + A+ RR LA Q+ YV R +YQE+M LFE +P+D AAR + DA+WGL P PPKLTAPLPRF+ + AF R D+T MG L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q P LV +F TDG+QLKLLLV G DV +V EG +GVFRL++VHRE+GAEP VA G AQERL A+D + VTGVDPGQ+LA S V A G++WRR++AAD ++P G+ + A EV G YR WALS+RNE+GE RR AN Y DA ALAD HTRTG + VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP+R Q PPGWK PRR+R KHR+WR R RR++FFG AR PARGR +IP K +V QLACR P +MTP+ +++ C CG+ TR GG E GHRNRVC + C + +A G G+ V +RD + N+G+RGV A GV DIIPGYP
Sbjct: 5 VERLINRFGQAAVNIAQGHEPSHTHRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGK---------------------------------------ALQAPGAPW------------------------------RLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLDQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQPQQLYVETDRTDYQELMSGLFEQFPNDAAARRENTDAVWGLLPVPPKLTAPLPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVMRAIERAGQPGYRILPPWLVDKTFMTDGHQLKLLLVGYINEELG-----------------DVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQMLAFSAVTALGQRWRRDSAADFAANPPPEGEGITAQEVPGADYREWALSVRNEEGEAQRRGANQAYGDALAALADRHTRTGRYQARIAGHCSSTGPCVVLSQHRGLLHECAYMHALALCCTGSTVRKGPLLSISMHNVLRAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAIAKMAEKLAPIRLQHRPPGWKRVRSRGREYPRRKR--KHRRWRDTHRRPRRIIFFGACARFPARGRAAIPIKKLVAQLACRCPTLMTPQPYSSASCLVCGQPTRGGGDEFGHRNRVCRNEN----CALAQAAEG----GVAVIDRDTNARANLGMRGVYATCGVADIIPGYP 794
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835Z8U0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U0_9STRA) HSP 1 Score: 628 bits (1620), Expect = 2.880e-210 Identity = 401/877 (45.72%), Postives = 492/877 (56.10%), Query Frame = 1
Query: 25 VERLYWEFGDSVLLPNGDF-PSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTR-----------------------------------SVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGGDGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWK---------PRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGY 2448
VERL FG + + + P TR + T+LRT+ER L + V LR+KT++C + VLHRH L I + +Q+ +DY+GKVRHLASLL+NYIC W L Q FP A + FF+ CL C+VQGAG G Q+P S RFQ+L + S LQAL P RL E+F YVA +AT A TYI H +RR IT WAL ALR HIM + PDT+VDM V PFT +VH+LA LVTTY G D LQ LN GFRG E+DD+G+VQEG + I DICE VR LPD + A+ RR LA LQ+ YV +YQ++M ELF YPDD AAR +RDA+WGL P PPKLT PLPRF+ + AF R D+T MG L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GV++A A Q AP LV +F TDG+QLKLLLV G DV +V EG +GV RL++VHRE+GAEP VA G AQERL A+D + VTGVDPGQVLA S V A G++WRR+NAAD ++P G+ V A EVSG YR WA S+RNEQGE RR AN Y+DA AL D H RTG R+ H PPGWK PRR+RR HR+WR R RR++FFG AR PA GR +IP K +V QLACR P +MTP+ +++ C CG TR GG E GHRNRVC + C + +A G G+ V +RD + N+G+RGV A GV DIIPGY
Sbjct: 5 VERLINRFGQAAVNTAQEHEPLHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSIAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQP----FPDATQRFFMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDIATVAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTSQAWMWPASTVRATVLVCHPTYELPLAKLIARVAPTAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGANCLMILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDCTDYQDLMSELFGQYPDDTAARRENRDAVWGLLPVPPKLTVPLPRFKPQPAFIRIDRTGMGQLFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVVRANERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVGYINEELG-----------------DVLEGEVAEGPNGVLRLQRVHREIGAEPATVADGTPAAQERLHALDHVVVTGVDPGQVLAFSAVTALGQRWRRDNAADFAANPPPEGEGVTAQEVSGADYRIWAQSVRNEQGEAQRRGANQAYSDALAALVDRHMRTG-------------------------------RYQH----------------------RPPGWKRVRSRGLQYPRRRRR--HRRWRDTHRRPRRIIFFGACARFPAGGRAAIPNKKLVAQLACRCPTLMTPQPYSSASCLVCGGATRGGGDEFGHRNRVCRNEN----CALAQAAEG----GVAVIDRDTNARANLGMRGVYATCGVADIIPGY 797
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A836CQS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQS9_9STRA) HSP 1 Score: 546 bits (1407), Expect = 1.830e-178 Identity = 317/582 (54.47%), Postives = 381/582 (65.46%), Query Frame = 1
Query: 25 VERLYWEFGDSVL-LPNGDFPSTTRSVLRTVLRTYEREAGRLPQGEDVFLRYKTITCCLQDVLHRHGQLHIQERMQEISDYIGKVRHLASLLSNYICDWHLAQAQAAHQQFPVADRDFFLACLACFVQGAGWG----------QVPASVAARFQELCNASGLQALPPPVPRPRLFEMFKYVATQMATAAGTYINEHGDQRRHDITRWALLWALRGHIM--EGFPDTEVDMNVGPFTRSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPTGQ 1686
VERL FG + + G PS TR + T+LRT+ER L + V LR+KT++C L VLHRH L I +Q+ +DY+GKVRHLASLL+NYIC W L Q FP A + FF+ CL C+VQGAG G Q+P S RFQ+L N S LQAL P RL E+F YVA MAT A TYI H +RR IT WAL ALR HIM + PDT+VDM V PFTR+VH+LA LVT Y G D LQ LN GFRG E+DD+G+VQEG DY I DICE VR LPD + A+ RR LA LQ+ YV R +YQ++M ELFE +PDD AAR +RDA+WGL P PPKLTAPLPRF+ + AF R D+T MG L L A M G WY FM+P A+ A+ TTM++RTNHYARSE+GVM+AI A Q AP LV +F TDG+QLKLLLV+S GPHGLTKLP GYQVGY + L DV+EG +GVFRL++VHRE+GAEP VA G AQERL A D + VTGVDPGQVLA S V A G++WRR++AAD ++P +
Sbjct: 236 VERLINRFGQAAVNTAQGHEPSHTRQLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIARTLQDATDYVGKVRHLASLLANYICTWKLDLGQP----FPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTIYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSELFEQFPDDAAARRENRDAVWGLLPVPPKLTAPLPRFKPQPAFIRIDRTGMGELFSGLAARMAGRGPWWYAEFMQPWAKAANSTTMRQRTNHYARSERGVMRAIERAGQPGYRILAPWLVDRTFMTDGHQLKLLLVSSHDLHQGPHGLTKLPRRGYQVGYINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHAQDHVVVTGVDPGQVLAFSAVTALGQRWRRDSAADFAANPLSE 813
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Match: A0A835ZFR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR8_9STRA) HSP 1 Score: 530 bits (1364), Expect = 4.420e-172 Identity = 318/611 (52.05%), Postives = 385/611 (63.01%), Query Frame = 1
Query: 694 RSVHELATLVTTYDGPDFDSALQEALNDWGFRGTEVDDEGEVQEGTDYSNIADICEAVRDLPD-NHHATWRRHLAVLQEDYVVQQRLEYQEIMGELFEAYPDDPAARAADRDALWGL-PAPPKLTAPLPRFEMKAAFCRYDKTAMGTLVPELQAEMGRLGICWYRAFMKPEARKAHVTTMQRRTNHYARSEKGVMKAIRHARQ------APLLVASSFETDGYQLKLLLVTSTLSRPGPHGLTKLPLAGYQVGYEDVTLEDVIEGG-----DGVFRLEKVHREVGAEP--VAYGPADAQERLAAMDGIAVTGVDPGQVLAVSGVGARGEQWRRENAADLVSDPT--GQEVAAFEVSGHIYRTWALSIRNEQGETARRVANDEYNDACTALADEHTRTGDIEVLTDHCTAYAEHGDAMYEELLHAVRKIQRFSHFRAQQRAAARVAEVIAPMRRQRMPPGWK---------PRRQRRQKHRKWRSNRRAGRRVVFFGVAARTPARGRPSIPTKAVVWQLACRAPVVMTPEAHTTVCCPGCGERTRPGGAEHGHRNRVCDSNLPHRICPIQEAVHGVGVRGLVVFNRDRSGATNIGVRGVCAVSGVEDIIPGY 2448
R+VH+LA LVTTY G D LQ LN GFR E+DD+ VQEG DY I DICE VR LPD N A+ RR LA LQ+ YV R +YQ++M LFE +PDD AAR +RDA+WGL P PPKLTAPLPRF+ + AF R D+T MG L P L A M G WY FM+P A+ A++TTM++RTNHYARSE+GVM+AI A Q +P LV +F TDG+QL+LLLVTS +S GPHGLT+LP GYQVG+ + L DV+EG +GVFRL++VHRE+GAEP VA G AQERL A+D VTGVDPGQVLA S V A G++WRRENAAD ++P G+ A EVSG YR WA S+RNEQGE RR AN Y+DA ALAD HTR G +VL +CT + H DAM+ ELLH R+ QRFS FRAQQ A A++AE +AP RRQ PPGWK P R+RR HR+WR R RR++ FG + G P + A + C CG+ TR GG E GHRNRVC + C + +A G + V +RD N+G+RGV A GV DIIPGY
Sbjct: 207 RAVHDLAELVTTYAGNDLHGELQARLNQLGFRYAELDDDRYVQEGADYLKILDICETVRHLPDGNSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVPPKLTAPLPRFKPQPAFIRIDRTGMGELFPGLAARMAGRGPWWYAEFMQPWAKAANITTMRQRTNHYARSERGVMRAIERAGQPGYRILSPWLVDRTFMTDGHQLELLLVTSHVSHQGPHGLTELPRRGYQVGFINEELGDVLEGEVAEGPNGVFRLQRVHREIGAEPATVADGTPAAQERLHALDHNVVTGVDPGQVLAFSAVTALGQRWRRENAADFAANPPPEGEGATAQEVSGADYRVWAQSVRNEQGEAQRRGANQAYSDALAALADWHTRAGRYQVLHAYCTTWGHHADAMWGELLHPARRHQRFSRFRAQQAAVAKMAEKLAPFRRQHRPPGWKRVRSRGCEYPHRKRR--HRRWRDTHRRPRRIILFGAS------GMP--------------VSDIEDATAIQSASCLVCGQPTRGGGDEFGHRNRVCRNE----DCALAQAAEG----RIAVIDRDTHARANVGMRGVYATCGVADIIPGY 787 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350755 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|350755 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12386 ID=mRNA_12386|Name=jgi.p|Trimin1|350755|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=943bp|location=Sequence derived from alignment at Contig_71:231495..238515- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGGTGCTGAACATCAAGCGGTCTGACACTGACAGCTTCCTGTGCGAback to top protein sequence of jgi.p|Trimin1|350755 >Trimin1|350755|estExt_Genemark1.C_Ctg_710027 ID=Trimin1|350755|estExt_Genemark1.C_Ctg_710027|Name=jgi.p|Trimin1|350755|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=282bp MVVLNIKRSDTDSFLCEATCSESNDALVRRLARMWNTRVRLMYLVGAVREback to top mRNA from alignment at Contig_71:231495..238515- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12386 ID=mRNA_12386|Name=jgi.p|Trimin1|350755|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7021bp|location=Sequence derived from alignment at Contig_71:231495..238515- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_71:231495..238515- >mRNA_12386 ID=mRNA_12386|Name=jgi.p|Trimin1|350755|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=846bp|location=Sequence derived from alignment at Contig_71:231495..238515- (Tribonema minus UTEX_B_3156 )back to top |