mRNA_12357 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA) HSP 1 Score: 927 bits (2397), Expect = 0.000e+0 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1 Query: 1 MPASGGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 MPASGGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN Sbjct: 1 MPASGGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 463
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA) HSP 1 Score: 684 bits (1766), Expect = 1.010e-242 Identity = 342/463 (73.87%), Postives = 387/463 (83.59%), Query Frame = 1 Query: 1 MPASGGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 M ASGGVIQIAARG+QDA++NDSPTHTIWR+VHTRFTSCAMDDE Q+LSNSGFDTSSSATINRYGDLISRV+LEI LPPLAAP++ I G SP + AD AA++VN IG+ACWEDVQVEIGGSLVDQLYSDFA+I+EELAGRPG+RLEE IG+VQ+S VD+DLIEKA +QQ LYVPLPLW SKYQPAT+GLALPIVALTFHDVRIKIKTR I++CT V ++D + AW L E +PLN NT T LVN+DLKIRLM+TSVYLD TER AMSSV HSFLI+TAQRQ+ ++ AN S+K E KL+ NHP S++ W VRPL+WNT AGRRRFSCGFRDRYDF+ EA T S LPYG+A+ PI ASL+LNGH RWP DM S YF H PY WRTMP T I TYSFALEA QWQPTS LNFSRLDHVSLG+ F +++SE F EAYNLLVIRDGLGGLRFSN Sbjct: 135 MTASGGVIQIAARGSQDAILNDSPTHTIWRSVHTRFTSCAMDDEFQDLSNSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYKD--NAAWKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFTAHEASTDAS-LPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLDHVSLGWTFCPNIKSSEAFSFVEAYNLLVIRDGLGGLRFSN 594
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA) HSP 1 Score: 590 bits (1522), Expect = 2.380e-208 Identity = 296/424 (69.81%), Postives = 351/424 (82.78%), Query Frame = 1 Query: 121 MDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGAS-PAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 MDD+ QELSNSGFDTSSSATINRYGDLISR++LEI LPPLAAP++ + A+ P YA D AA++VN+IG+ACWEDVQVEIGGSLVDQLYSDFA+I+EELAGRPG+RLEE IG+V YSAEVD DLIEKA + Q LYVPLPLW SKYQP+T+GLALPIVALTFHDVR+KIKTR IADCT V +++ W L + L PLN +T T LVN+DLKIRLM++SVYLD TER AMS+VTHSFLINT QRQ+ ++ A S++ E KLY NHP S++ W+VRPL+WNT AGRRRFSCGF+DR+DF+ EA S + YGNA+ PI ++SLSLNGHQRWP DMPS+YF H PY +WRT+P+T I +YSFALEA+ WQPTS LNFSRLDHVSLG++F +++SE F EAYNLLVIRDGLGGLRFSN Sbjct: 1 MDDDFQELSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPATNPVTYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKE--DDVWHLTD-LAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDSLI-YGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLDHVSLGWSFAPGIKSSEAFSFVEAYNLLVIRDGLGGLRFSN 420
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA) HSP 1 Score: 571 bits (1472), Expect = 1.750e-200 Identity = 279/439 (63.55%), Postives = 346/439 (78.82%), Query Frame = 1 Query: 79 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 TIW++VHTRFTSCA+DDE QELS SGF ++S+ATI+RYGDL+SR++LEIVLPPL+AP+I A A AD A+YVN IG+A WED +EIGGS VDQL+SDF I+EELAGR G+RLEE IG+V +SA+VD+DLIEK++R+QTLYVPLPLW SKYQPATWGLALPIVAL+FH++++K+KTR IA+C V ++D+ W L + L P+N T T LVNSD+KIRL+++ VYLDVTER AMSSV HSFLIN QRQ+ V A SK+E KL+ NHPCS++ W +RPL+WNT GRRRFSCG++DRYDFSH++ G+V T LP+G+AI I ASLSLNGHQRWP D S+YF PY WRTMP T I TYSFAL+A WQPT+ LNFSR +HVSLG F A ++ASE++ E+YNLL+I +GLGGL+FSN Sbjct: 1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGD-WRLSD-LAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRYNHVSLGLTFAAGIKASELIAMVESYNLLIIANGLGGLKFSN 437
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA) HSP 1 Score: 540 bits (1392), Expect = 2.220e-188 Identity = 270/436 (61.93%), Postives = 343/436 (78.67%), Query Frame = 1 Query: 79 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEI--AIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGG 1374 TI+++VHTRFTS A+DD+ QELS SGF ++S+AT++RYGDLISR++LEIVLP L AP+I AGAS A YA + AYYVN IG+A WED +EIGGS +DQL+SDF I+EE+AGR GLRLEE +G+V +S VDDDLIEK+SR+QTLYVPLPLW SKY PAT+GLALPIVAL+FH++++K+KTR IA+C V ++DA W L + L P+N T T LVNSDLK+RL+++ VYLDVTER AMSSV HS LIN QRQ+ +V A +K E KL++NHPC+ + W +RPL+WNT GRRRFSCG++DR+DFSH+E G+V T LP+G+++ I ASLSLNGHQRWP DM ++YF P+ WRTMP+TPI +YSFAL+A WQPTS LNFSRLDH+SLG F + ++ASE++ F E+YNLLVI +GLGG Sbjct: 1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYA--ETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGD-WRLSD-LAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHISLGLTFASGIKASELVAFVESYNLLVIANGLGG 432
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA) HSP 1 Score: 525 bits (1352), Expect = 1.370e-181 Identity = 264/428 (61.68%), Postives = 328/428 (76.64%), Query Frame = 1 Query: 88 RAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEI--AIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSL--GFNFNAELQASEMLVFAEAYNLLV 1353 RAVHTRFTSCA+DDE QELS SGF ++S+ATI+RYGDL+SR++LEIVLPPL+AP+I +GA A+YA D AAYYVNSI +A WEDV +EIGGS VDQL+SDF I+EELAGR G+RLEE IG+V +SA+VD+DL EK++R+QTLYVPLPLW SKYQPATWGLALPIVAL+FH++++K+KTR IA+C V ++D+ W L + L P+N T T LVNSD+K+RL+++ VYLDVTER AMSSV HSFLIN QRQ+ V A SK+E KL+ NHPCS++ W +RP +WN GRRRFSCG++DR+DFSH+E GTV T L +G+ + PI AS SLNGHQRWP D + YF PY WRTMP T I TYSFAL+A WQPT+ LN SRL L G F A ++ASE++ E+YNLL+ Sbjct: 40 RAVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYA--DTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGD-WRLSD-LAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDWNLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLKKTGLKNGLTFAAGIKASELIAMVESYNLLI 463
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC) HSP 1 Score: 364 bits (934), Expect = 5.050e-119 Identity = 191/442 (43.21%), Postives = 283/442 (64.03%), Query Frame = 1 Query: 79 TIWRAVHTRFTSCAMDDELQELSNS--GFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHR---DAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 T+++ VH R+TS A D E + S GF SA ++RYGDL++ + +E+ LPP+ A A + A AD AAY+VN+IGYA ++Q+EIGG+ VD LY ++ +E + RPG RL E IGK YSA+V++D+IE A + +TLYVPLP W +KY T GL++P++ALT+H++++K+ RP+++C V +R + + + L EG P+N + + LV+SD+ +L+I+ VYLD ER A +S HS+LI QRQ+ + + S+ + KLY NHP + + W VRP +W TN RRRFS G D +DFS T + +G+ I P+ +ASL+LNGH R+P MP +F QP + W + +SF+L+ WQPTSTLN SR+DHV L + + + S++ VFAE+YNLLV++DG+GG+R+SN Sbjct: 2 TLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEA--AATVTNAEGVEVADADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMET-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAEDETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTN--RRRFSVGHMDSFDFS---LHTDSDVSVWGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRIDHVQLELKYGSNIPTSDVFVFAESYNLLVVKDGMGGVRYSN 435
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC) HSP 1 Score: 363 bits (932), Expect = 1.010e-118 Identity = 193/443 (43.57%), Postives = 287/443 (64.79%), Query Frame = 1 Query: 79 TIWRAVHTRFTSCAMDDELQELSNS--GFDTSSSATINRYGDLISRVSLEIVLPPL-AAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRD---AVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 T+++ VH RFTS A D E + S GF SATI+RYGDL++ + +EI LPP+ AA + A + A+ AD AAY+VN+IG+A +VQ+EIGG+ VD LY ++ +EE+ RPG RL E IGK YSA+V++D+IE A + +TLYVPLP W +KY GL++P++ALT+H++++K+ RP+++C V +R + + L EG +P+N + + LV+SD+ +L+++ VYLD ER A ++ H++LI T QRQ+ + + SS + KLY NHP + +TW VRP +W TN RRR+S G D +D+S K V+ +G+ P+ ASL+LNGH R+P +MP +F QP + W + +SF+L+ WQPTSTLN SR+DHV L + + S + VFAE+YNLLV+++G+GG+R+SN Sbjct: 2 TLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVAD---ADKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEA-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTHGEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTN--RRRYSVGHMDLFDYSLKSTSDVSV---WGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRIDHVQLELKYGTSIPTSNVFVFAESYNLLVVKEGMGGVRYSN 435
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K) HSP 1 Score: 352 bits (903), Expect = 8.580e-114 Identity = 192/441 (43.54%), Postives = 280/441 (63.49%), Query Frame = 1 Query: 79 TIWRAVHTRFTSCAMDDELQELSNS--GFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATW---GLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAV---SQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFS-HKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGG 1374 T++++ H R+T+ A D E + S GF SA ++RYGDL+S V LE+ LP + A E + GA A AD AAY+VN+IGYA +V++EIGG+ VD LYS++ ++EEL RPG RL E IGK YSA+V++D+IE AS+++ LYVPLP W +KY W GL++P++ALT+H+++IK+ RP+ADC V +R++ W L +P+N + + + SD+ RL+++ VYLD ER A +SV H +LI T QRQ+ ++ + + + KLY NHP +A+ W VRP ++ RRRFS G +D +DFS KE TV+ +G+ +A+ASL+LNGH R+P +P +F QP + W PA ++FA W PTSTLN SR+DHV L + + S+++VF EAYNLLVI++G+GG Sbjct: 2 TLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAG--TEVADADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKY----WMEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYRESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNL--RRRFSVGHKDMFDFSLQKEDATVSM---WGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRIDHVQLELKYGDNIPTSDVIVFNEAYNLLVIKEGMGG 431
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Match: A0A6C0K9I3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0K9I3_9ZZZZ) HSP 1 Score: 197 bits (500), Expect = 8.700e-55 Identity = 144/460 (31.30%), Postives = 223/460 (48.48%), Query Frame = 1 Query: 13 GGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNSG-FDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTVTSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLDHVSLGFNFNAELQASEMLVFAEAYNLLVIRDGLGGLRFSN 1389 GG++Q+ A G QD + P T ++ V+ R T+ A++ Q + S S ++R GDL++ + LE+VLP L S Y PA +G+A + ++EIGG VD+ Y ++ I++EL E+ G Y V D + +TLY+PL W ++ GLALP++AL +H+V++ I+ RP AD V ++ +G V S+ + +L + VYLD ER + ++H +LI+ Q A + +S L +L NHP + WV + + DR++F K G + + +A+L LNGH+R+ P+SYF QPY H +PA PI YSFAL + QP+ T NFSR+D+ SL N + + +LV+A YN+L I G+GGL +SN Sbjct: 3 GGLMQLVAYGAQDIYLTGEPQITFFKVVYRRHTNFAIESIEQTFTGSDDLGKKVSCVVSRNGDLVNGIHLEVVLPVL----------SGTTAYTPA---------VGHALIQSAEIEIGGQKVDKHYGEWLEIWDELTASE----EKSSG---YMDMVAKDATVMHTGGETLYIPLQFWFNRNP----GLALPLIALQYHEVKVLIEFRPFADLLVENTGGTITGKGLTSDG------------VASEFQAKLYVDYVYLDTEERRRFAQMSHEYLIDQLQHTGAETVDSGNSSL--RLNFNHPVKELVWVFQS----------QADIDKNDRFNFGTK-----------GKGVEVLKDATLLLNGHERFS-SRPASYFRLMQPYQHHTRVPAKPIYVYSFALRPEEHQPSGTCNFSRIDNASLKINTESAFSGN-VLVYAVNYNVLRIVSGMGGLAYSN 395 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176230 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12357 ID=mRNA_12357|Name=jgi.p|Trimin1|176230|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1392bp|location=Sequence derived from alignment at Contig_134:413458..414849+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCCGCGTCAGGTGGAGTCATCCAGATCGCCGCCCGCGGCACCCAGGAback to top protein sequence of jgi.p|Trimin1|176230 >Trimin1|176230|e_gw1.134.58.1 ID=Trimin1|176230|e_gw1.134.58.1|Name=jgi.p|Trimin1|176230|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp MPASGGVIQIAARGTQDAVINDSPTHTIWRAVHTRFTSCAMDDELQELSNback to top mRNA from alignment at Contig_134:413458..414849+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12357 ID=mRNA_12357|Name=jgi.p|Trimin1|176230|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1392bp|location=Sequence derived from alignment at Contig_134:413458..414849+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_134:413458..414849+ >mRNA_12357 ID=mRNA_12357|Name=jgi.p|Trimin1|176230|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_134:413458..414849+ (Tribonema minus UTEX_B_3156 )back to top |