mRNA_12341 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352868
Unique NamemRNA_12341
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 6.270e-138
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 3
Query:   12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 629
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 7.280e-111
Identity = 168/184 (91.30%), Postives = 174/184 (94.57%), Query Frame = 3
Query:   12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 563
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V +  AK +A+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS 184          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 305 bits (781), Expect = 4.090e-103
Identity = 155/178 (87.08%), Postives = 165/178 (92.70%), Query Frame = 3
Query:   12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAA 545
            MSKRDYD LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF H+ DWL+EVNRYASEGT KLL+GNKSDR DK V+TE+AK FA  LGIPFLETSAK+ASNVEEAFLTMA ELIR REA+ A
Sbjct:    1 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGA 178          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.870e-101
Identity = 162/205 (79.02%), Postives = 171/205 (83.41%), Query Frame = 3
Query:   18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRA-DKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 629
            K DYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ+SF HVNDWL EVNRYASEGT KLL+GNKSDR  DK VT EQAK FA  +GIPFLETSAKSA+NVEEAFLTMASELI+ R AR     ++ G    VQL  G         CC
Sbjct:    8 KSDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGD--NVQLGGGKRAKEMMSNCC 210          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 300 bits (768), Expect = 3.060e-101
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = 3
Query:   12 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAE-SSGTAATVQLRPGASGGGSSGKCC 629
            MSKRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESF HV+DWL+EVNRYA+EGT KLL+GNK D  DK VTTE AK +A  LGIPFLETSAK+A+NVEEAFLTMA ELIR REA  +Q A+  +G A+ ++L  G+S    + KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREA--SQSAKPGAGGASGLKLSGGSS---RTKKCC 202          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.380e-100
Identity = 149/175 (85.14%), Postives = 166/175 (94.86%), Query Frame = 3
Query:   15 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539
            +KRDYDHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESF HV+DWL+EVNRYASEGT KLL+GNKSDRAD AV++E+AK +A+ LGIPFLETSAK+A NVE AFLTMASELI+ R+AR
Sbjct:    8 TKRDYDHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 296 bits (759), Expect = 9.140e-100
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 3
Query:   18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539
            +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESF HVNDWL EVNRYA+EGT KLL+GNKSDR ADK VT E+AK FA  LGI FLETSAKSA NVEEAFLTMA ELIR R+AR
Sbjct:   12 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDAR 186          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: B7FVL6_PHATC (Predicted protein n=5 Tax=Bacillariophycidae TaxID=33850 RepID=B7FVL6_PHATC)

HSP 1 Score: 295 bits (755), Expect = 3.350e-99
Identity = 152/177 (85.88%), Postives = 163/177 (92.09%), Query Frame = 3
Query:   18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAA 545
            +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMV+DVTS +SF HVNDWL EVNRYA+EGT KLL+GNKSDR AD+ VT EQA+ FA  LGIPF+ETSAKSA NVEEAFLTMA ELIR R AR+A
Sbjct:    9 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMAGELIRQRAARSA 185          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A7S4JIY9_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4JIY9_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.270e-98
Identity = 153/176 (86.93%), Postives = 161/176 (91.48%), Query Frame = 3
Query:   15 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 539
            +KRDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGII+VYDVTS +SF HVNDWL EVNRYASEGT KLLIGNKSDR +DK V  E+AK FA  LGI FLETSAKSA NVEEAFLTMA ELI+ REAR
Sbjct:   45 NKRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIILVYDVTSADSFDHVNDWLKEVNRYASEGTCKLLIGNKSDRTSDKVVAAEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQREAR 220          
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Match: A0A1Z5J904_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J904_FISSO)

HSP 1 Score: 293 bits (751), Expect = 1.360e-98
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:   18 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDR-ADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSG 566
            +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+DKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMV+DVTS ESF HVNDWL EVNRYA+EGT KLL+GNKSDR AD+ VTTEQA+ FA  LGIP++ETSAKSA NVEEAFLTMA ELIR R A    + E  G
Sbjct:    9 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRTADRVVTTEQAQEFAAELGIPYIETSAKSAKNVEEAFLTMAGELIRQRVASGTDKDEKKG 192          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352868 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z965_9STRA6.270e-138100.00Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
D7G118_ECTSI7.280e-11191.30Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
W7TI50_9STRA4.090e-10387.08Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3VAP6_9STRA1.870e-10179.02Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
F0YFR6_AURAN3.060e-10177.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2C3M2_9STRA1.380e-10085.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GR15_CYCTE9.140e-10088.00Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
B7FVL6_PHATC3.350e-9985.88Predicted protein n=5 Tax=Bacillariophycidae TaxID... [more]
A0A7S4JIY9_9STRA1.270e-9886.93Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A1Z5J904_FISSO1.360e-9882.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_134contigContig_134:361398..363063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352868|estExt_Genemark1.C_Ctg_1340043
BRITEko00000,ko00001,ko04031,ko04131,ko04147
KEGG Pathwayko05134,map05134
KEGG koko:K07874
DescriptionGTPase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0084@1|root,KOG0084@2759|Eukaryota
Evalue1.06e-111
Seed ortholog2880.D7G118
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRab1A, RAB family GTPase
Ec32 orthologEc-19_002140.1
TranscriptId353190
TrackFilteredModels1
ProteinId352868
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352868gene_12341Tribonema minus UTEX_B_3156 geneContig_134 361398..363063 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12341_1exon_12341_1Tribonema minus UTEX_B_3156 exonContig_134 361398..361425 +
exon_12341_2exon_12341_2Tribonema minus UTEX_B_3156 exonContig_134 361619..362078 +
exon_12341_3exon_12341_3Tribonema minus UTEX_B_3156 exonContig_134 362920..363063 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12341UTR5_12341Tribonema minus UTEX_B_3156 five_prime_UTRContig_134 361398..361408 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12341CDS_12341Tribonema minus UTEX_B_3156 CDSContig_134 361409..361425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352868Trimin1|352868|estExt_Genemark1.C_Ctg_1340043Tribonema minus UTEX_B_3156 polypeptideContig_134 361409..363063 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12341 ID=mRNA_12341|Name=jgi.p|Trimin1|352868|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=632bp|location=Sequence derived from alignment at Contig_134:361398..363063+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAGGCGGAGGATGTCCAAGCGCGACTATGATCACCTGTTCAAGCTGGTG
CTGATCGGGGACTCAGGCGTTGGAAAGAGCTGCCTTCTGCTGCGGTTCGC
CGATGATGCCTTCACCGACAGCTACATCAGCACCATCGGCGTTGACTTCA
GGTTTCGGACTGTTAAGATAGACAAGAAAACAGTCAAACTCCAGATCTGG
GACACAGCGGGGCAAGAGCGGTTCCGCACCATCACGAGCGCCTACTATAG
GGGCGCCGACGGTATCATCATGGTATACGATGTTACTAGTCAGGAGTCAT
TTGGGCACGTGAACGACTGGCTCAGTGAAGTGAACCGCTATGCCAGCGAG
GGGACCAGCAAGCTGCTGATTGGCAACAAGAGCGACAGGGCCGATAAGGC
GGTCACCACGGAGCAAGCAAAGTCATTTGCTCAGTCATTGGGGATACCTT
TTTTGGAGACAAGCGCGAAGAGCGCCAGTAATGTGGAGGAAGCATTCTTG
ACAATGGCCAGTGAGCTGATCAGGACAAGGGAGGCACGGGCAGCTCAGCA
GGCGGAGTCTTCAGGAACTGCCGCTACGGTGCAGCTACGGCCTGGGGCGT
CGGGGGGGGGAAGCAGTGGCAAGTGCTGCTAG
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protein sequence of jgi.p|Trimin1|352868

>Trimin1|352868|estExt_Genemark1.C_Ctg_1340043 ID=Trimin1|352868|estExt_Genemark1.C_Ctg_1340043|Name=jgi.p|Trimin1|352868|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=207bp
MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRT
VKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHV
NDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLET
SAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGG
SSGKCC*
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mRNA from alignment at Contig_134:361398..363063+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12341 ID=mRNA_12341|Name=jgi.p|Trimin1|352868|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1666bp|location=Sequence derived from alignment at Contig_134:361398..363063+ (Tribonema minus UTEX_B_3156 )
GGAGGCGGAGGATGTCCAAGCGCGACTAGTAAGTGCATCATTCGATCAGC GGAAGTTCTGCTATCATATACACGCAAGATGTACCACTGCCGTCGCTCGT CAGTTGCAAAGCCTCTGCTGCCTTCTCTTTGATGCGGAGGCCCAGTGTGG CCGGCAGTGGCGCAGCTGGCGGTCTGACGCAACGTACGCACCTTCATTGC CTGTCGTCTCTCCTCTTGCAGTGATCACCTGTTCAAGCTGGTGCTGATCG GGGACTCAGGCGTTGGAAAGAGCTGCCTTCTGCTGCGGTTCGCCGATGAT GCCTTCACCGACAGCTACATCAGCACCATCGGCGTTGACTTCAGGTTTCG GACTGTTAAGATAGACAAGAAAACAGTCAAACTCCAGATCTGGGACACAG CGGGGCAAGAGCGGTTCCGCACCATCACGAGCGCCTACTATAGGGGCGCC GACGGTATCATCATGGTATACGATGTTACTAGTCAGGAGTCATTTGGGCA CGTGAACGACTGGCTCAGTGAAGTGAACCGCTATGCCAGCGAGGGGACCA GCAAGCTGCTGATTGGCAACAAGAGCGACAGGGCCGATAAGGCGGTCACC ACGGAGCAAGCAAAGTCATTTGCTCAGTCATTGGGGATACCTTTTTTGGA GACAAGCGCGAAGAGCGCCAGTAATGTGGAGGTGAGTCACCTGCTGAGAT ACAATGTCTCATTTGCATACATCCGCTCTATTGGTCCAATGAGGACCTGA TATCTGCCTCGTCAAGCGCAGTGAGTGTTGTGTTCACGGCTGCTGACTTG TGTAAGTGGATGGCAGCATAGAGGTGCGATACATAACAATTTTTACGGTG TATACCATATCTTGCTGTACATGATGTTTATGCCAGCAAAGCGGCATGCA CCAGCTACATGCATTTTCTATGTTTTACGGCCGCAATCCAGCAGCTCCCT GTGCTAATTAGGGATTCATGACACAGGGTATTTGATGCACAAGTTGTGGA AACCTTCGCAGCAGCATTGATGATGATTTTCTCATAAGCAATCCACCTGC AGGGTGCGAACGCGTGTGAAATTGTGTGGCTCGTGCAAGAAAGCGAGCCG AGCAACACACGTCTGCAGCAGAGGATATCGCAATGCGTCGTACTTATTAT AGCTTGTGTAACCATGATGGTCGGCGGTCGACGTGGAGATCCCAACATGA CTACTGTTGTCTATAATGATTTGCTGTACTGCTGTCGCATGCACGGCTGT CGCGTGCACATGCGCCTTCCTAATGTACACGGCACCTGAACTGTAAACCT CACCCTAAGCGCCCTTTGCGCTGACGCGACCAAGCGGCATGAAGTCATTT ACGGTAATGATGCTGTTCCTGCTCAACTGCGCATGGAAGGCCTTTGAAGG ACGCATATGATGACGTGACATAACCCACACGGCTGTGCGTCTGCAGCCAC AGCATCAATAGCAATTGCCTAATGATGGTCAAATAACAGCCCATGTCCTG CTCTGCTCTGCCATGACCTCAGGAAGCATTCTTGACAATGGCCAGTGAGC TGATCAGGACAAGGGAGGCACGGGCAGCTCAGCAGGCGGAGTCTTCAGGA ACTGCCGCTACGGTGCAGCTACGGCCTGGGGCGTCGGGGGGGGGAAGCAG TGGCAAGTGCTGCTAG
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Coding sequence (CDS) from alignment at Contig_134:361398..363063+

>mRNA_12341 ID=mRNA_12341|Name=jgi.p|Trimin1|352868|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=621bp|location=Sequence derived from alignment at Contig_134:361398..363063+ (Tribonema minus UTEX_B_3156 )
ATGTCCAAGCGCGACTATGATCACCTGTTCAAGCTGGTGCTGATCGGGGA
CTCAGGCGTTGGAAAGAGCTGCCTTCTGCTGCGGTTCGCCGATGATGCCT
TCACCGACAGCTACATCAGCACCATCGGCGTTGACTTCAGGTTTCGGACT
GTTAAGATAGACAAGAAAACAGTCAAACTCCAGATCTGGGACACAGCGGG
GCAAGAGCGGTTCCGCACCATCACGAGCGCCTACTATAGGGGCGCCGACG
GTATCATCATGGTATACGATGTTACTAGTCAGGAGTCATTTGGGCACGTG
AACGACTGGCTCAGTGAAGTGAACCGCTATGCCAGCGAGGGGACCAGCAA
GCTGCTGATTGGCAACAAGAGCGACAGGGCCGATAAGGCGGTCACCACGG
AGCAAGCAAAGTCATTTGCTCAGTCATTGGGGATACCTTTTTTGGAGACA
AGCGCGAAGAGCGCCAGTAATGTGGAGGAAGCATTCTTGACAATGGCCAG
TGAGCTGATCAGGACAAGGGAGGCACGGGCAGCTCAGCAGGCGGAGTCTT
CAGGAACTGCCGCTACGGTGCAGCTACGGCCTGGGGCGTCGGGGGGGGGA
AGCAGTGGCAAGTGCTGCTAG
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