mRNA_12311 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A835ZGD5_9STRA (Inhibitor of apoptosis-promoting Bax1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD5_9STRA) HSP 1 Score: 456 bits (1173), Expect = 1.240e-158 Identity = 272/273 (99.63%), Postives = 272/273 (99.63%), Query Frame = 2 Query: 80 MASPATPEFSFPNWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEKXXXXXXXXXXXXXXXXXXXSRKSEMSAFATTTRR 898 MASPATPEFSFPNWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEKXXXXXXXXXXXXXXXXXX SRKSEMSAFATTTRR Sbjct: 1 MASPATPEFSFPNWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEKXXXXXXXXXXXXXXXXXXSSRKSEMSAFATTTRR 273
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: D8LM79_ECTSI (Putative BAX inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM79_ECTSI) HSP 1 Score: 197 bits (501), Expect = 3.220e-57 Identity = 107/218 (49.08%), Postives = 155/218 (71.10%), Query Frame = 2 Query: 143 SAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 796 SA K + +T +V++H+A+VY ALA T++A A G L + GGLL+ + GA++ L++ +N+ R+G+LL GLL+G+++G L+ + L ++P+I++ + T VF CFA AL AKRR+YLYLGG+L SV S++ + SLLN+FMR L +QL+GGL FCG+V+FDTQL++EKA G RD A HA ELF+DFV IFVRI II++RN +K Sbjct: 17 SALLKANDITLDVQRHLANVYAALAATVLACAFGAAADLWLHVGGLLTVVAGLGAMMWLAADQDKNNYPKRVGILLLFGLLKGLSLGPLIDMVLHVDPSILVTSLLATTTVFVCFAGTALFAKRRSYLYLGGLLSSVLSVLMVASLLNLFMRLEFLMSIQLYGGLAVFCGYVIFDTQLVVEKATLGDRDFAWHAAELFIDFVGIFVRICIILMRNKDK 234
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A1Y1HWI9_KLENI (BAX inhibitor 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWI9_KLENI) HSP 1 Score: 178 bits (451), Expect = 6.440e-50 Identity = 107/235 (45.53%), Postives = 163/235 (69.36%), Query Frame = 2 Query: 107 SFPNWTQSRNDSSA--ATKN-SPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALS-SGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLN-MFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 796 SF ++ + RN + + A KN + L+ V+KH+ VYI L ++ AA+GV H + N GG L+ LG G I L+ + A + RM LL+G LQG ++G LV V L+I+P+IVL+A GT VFACF+ AAL+A+RR+YLYLGGVL S S+M ++ L + +F RS +++L+L+ GL+ FC +V++DTQ+++E+AV G +D HA++LFVDFV+IFVR+++I+ +N +K Sbjct: 3 SFTSYFEGRNANVSFDALKNFNALSSGVQKHLQRVYITLTAAVLVAAVGVYAHTLLNLGGTLTHLGFIGLTIWLTMTPATPAQEGKRMSLLMGAAFLQGCSLGTLVQVILAIDPSIVLMAFLGTTAVFACFSGAALLAQRRSYLYLGGVLSSAVSVMMMLHLGSWLFGRSAAMFQLELYAGLLVFCAYVIYDTQVIVERAVRGEKDHIKHALDLFVDFVAIFVRLMVILAQNEQK 237
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A1V9ZSC7_9STRA (Bax inhibitor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC7_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.720e-48 Identity = 103/220 (46.82%), Postives = 145/220 (65.91%), Query Frame = 2 Query: 137 DSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 796 D A K + ++ V++H+ VY ALA T++ A +GV L M + GL S GS G +I L RMG+LL I G+ IG LV+VAL ++ +IV+ A TAV+F CF +AL+ KRRTY+YL V+ S T +M ++SL+N+F RS LY L+ GL+ FCG+V+FDTQ++IEKA G D HA+ELF+DF++IFVR+L+I++RNAEK Sbjct: 11 DLGALLKANDISIPVQQHLVRVYAALAATILVAGVGVALDAMLDLAGLTSTFGSLGLIIYLFF-VDKQLVAKRMGVLLTIAACMGINIGPLVSVALDVDASIVITAFLATAVIFLCFTGSALIEKRRTYMYLISVISSATLVMSMISLVNLFTRSIALYNAHLYMGLLVFCGYVLFDTQMIIEKASLGDLDFIGHALELFLDFINIFVRLLVILLRNAEK 229
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A5D6XIH1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIH1_9STRA) HSP 1 Score: 170 bits (430), Expect = 9.500e-47 Identity = 109/246 (44.31%), Postives = 149/246 (60.57%), Query Frame = 2 Query: 83 ASPATPEFSFPNWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGG--------LLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 796 AS ++P S W D S + +V++H+A VY L C ++ AA+ L G LL LGS G + L N T R+G+LL + G+++ LV +AL+++P IV+ A T +VF CF +A++A RR+YLYLG +L S S M L++ LN+F RS MLY L+GGLV FCG+VVFDTQ++IEKA G RDV HA+ELF+DFVSIFVRI+II+I+NA K Sbjct: 8 ASSSSPSASAVTW-----DLKTMFNASGIPADVQQHLARVYSTLTCCVLTAALAAGACLALGGGASDGSSWLPLLCFLGSTGGSVWLQLEP-TYNHTKRVGILLAVAATTGVSLAALVDLALAVDPTIVITAFLMTTLVFVCFTGSAMLATRRSYLYLGAILSSALSTMALLNFLNIFFRSTMLYSANLYGGLVIFCGYVVFDTQMIIEKATMGDRDVLRHALELFLDFVSIFVRIMIILIKNAAK 247
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A6G0WLI3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLI3_9STRA) HSP 1 Score: 167 bits (422), Expect = 8.130e-46 Identity = 94/226 (41.59%), Postives = 150/226 (66.37%), Query Frame = 2 Query: 116 NWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAE 793 ++T D +A K + ++ V+KH+A VY LA T++ AA GV +M + G++S + SF VIAL+ + T R+ +L+GI G+ +G L+++AL ++P IV+ A GTAVVFACF +A++ KRR+Y YL + S + L+ L+N+F++S +Y ++L+ GL+ FCG+V+ DTQ++IEKA G RD H +ELF+DFVS+FVR+L+I++ A+ Sbjct: 7 HFTTKSFDFAALLKTNDISASVQKHLAKVYTTLAITVLVAAAGVLADMMFDLVGIISSIASFALVIALAV-MDTRDVTKRLNVLMGIAFTTGVNLGPLISLALDVHPMIVVSAFLGTAVVFACFTGSAMLEKRRSYFYLYAAISSGVLCLTLLQLINIFVKSHAMYTMELYMGLLIFCGYVLVDTQMIIEKASLGDRDFVSHTLELFLDFVSLFVRVLLILLEKAK 231
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A024U0X3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0X3_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.400e-45 Identity = 92/219 (42.01%), Postives = 144/219 (65.75%), Query Frame = 2 Query: 137 DSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAE 793 D +A K + ++ V+KH+ +VY LA TL+ AA+GV + G LSGLG G + L + ++ R+ +L I G+ G LV++AL +NP +V A GT+V+FACF +A++ KRR+Y +L + S + L+ L+N+F+RS +Y ++L+ GL+ FCG+V+ DTQ++IEKA G RD LH+++LF+DFVSIFVRIL+++++NAE Sbjct: 17 DFAALLKTNDISAAVQKHLVNVYTTLATTLLVAAIGVVADIKFTLAGALSGLGVIGLLFYLHF-IHINDTPKRLSVLYAIAFATGVNTGPLVSIALDVNPMLVATALFGTSVIFACFTGSAMLEKRRSYFFLYSAISSAILCLSLIQLVNIFVRSSAVYTVELYAGLLIFCGYVLLDTQMIIEKASLGDRDFVLHSLDLFLDFVSIFVRILVVLLKNAE 234
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A9NKD2_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NKD2_PICSI) HSP 1 Score: 166 bits (421), Expect = 1.810e-45 Identity = 92/211 (43.60%), Postives = 147/211 (69.67%), Query Frame = 2 Query: 167 LTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVI-ALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLN-MFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAE 793 ++ V+ H+ VY++L+C L+AAA+GV LHL+ N GGLL+GL G+VI LS Y++N R LLL +G T+G L+ + I+P+I++ A GT++ FACF+AAA+ A+RR YL+LGG+L S SI+ + L + +F S +Y +++ GL+ F G+++FDTQ++IEKA G D H+++LF+DFV++FVR+++IM +N++ Sbjct: 33 ISPAVQSHLKKVYLSLSCALVAAAIGVYLHLLLNIGGLLTGLACIGSVIWLLSVPTYSNNEGKRATLLLAAAAFKGATLGPLIDAVIDIDPSILVSAFVGTSLAFACFSAAAITARRREYLFLGGLLASGVSILMWLQLASAIFGGSSAIYTFEIYFGLLVFLGYIIFDTQMIIEKADHGDYDYLKHSLDLFIDFVAVFVRLVVIMAKNSD 243
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A485KSM5_9STRA (Aste57867_10871 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSM5_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.920e-45 Identity = 95/220 (43.18%), Postives = 145/220 (65.91%), Query Frame = 2 Query: 137 DSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTA-RMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAE 793 D +A K + ++ V+KH+ +VY LA T++ AA+GV + N G LSG+G G + L N T R+ +LLGI G+ G LV++AL +NP +V A GT+V+FACF +AL+ KRR+Y +L + S + L+ L N+F+RS LY ++L+ GL+ FCG+V+ DTQ++IEKA G RD LH+++LF+DFVSIFVR+L+++++NA+ Sbjct: 18 DFAALLKTNDISAPVQKHLVNVYSTLAATVLVAAVGVAADVAFNLAGALSGIGVIGLIFYLMF--IDRNATPKRLAVLLGIAFTMGVNTGPLVSLALDVNPWLVATAFFGTSVIFACFTGSALLEKRRSYFFLYSAMSSAVLCLSLVQLANIFVRSASLYSVELYMGLLLFCGYVLVDTQMIIEKASLGDRDFVLHSLDLFLDFVSIFVRLLVVLLKNAD 235
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Match: A0A067CKP9_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKP9_SAPPC) HSP 1 Score: 164 bits (415), Expect = 9.030e-45 Identity = 96/226 (42.48%), Postives = 146/226 (64.60%), Query Frame = 2 Query: 119 WTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIAAAMGVTLHLMTNCGGLLSGLGSFGAVIALSSGAYASNFTARMGLLLGIGLLQGMTIGELVAVALSINPAIVLLAAAGTAVVFACFAAAALVAKRRTYLYLGGVLGSVTSIMCLMSLLNMFMRSPMLYELQLFGGLVAFCGFVVFDTQLMIEKAVGGSRDVALHAMELFVDFVSIFVRILIIMIRNAEK 796 +T+S + A K + ++ V++H+ VY ALA TL+AAA GV L + + G+ + S G + L R+G+L+ I G+ IG LVA AL+++PAIV+ A T V+F CF +AL+ KRR+Y+Y+ + S T +M L+SL+N+F RS LY L+ GL+ FC +V+FDTQ++IEKA G D LHA++LF+DFV+IFVR+++I++RN E+ Sbjct: 7 FTRSAWNMEALFKANDISVPVQQHLVRVYTALAATLLAAAAGVGLDMAYDLAGITTVCASVGFIFGLFF-VEKHLVMKRLGMLMAIATCTGINIGPLVATALNVDPAIVVTACLATTVIFLCFTGSALIEKRRSYMYMMSFISSATMVMSLISLVNIFSRSIALYNAHLYMGLLVFCAYVLFDTQMIIEKATMGDMDFVLHALDLFLDFVNIFVRLVVILLRNKEQ 231 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352861 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12311 ID=mRNA_12311|Name=jgi.p|Trimin1|352861|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1206bp|location=Sequence derived from alignment at Contig_134:143549..145376- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACCATACCTGCGAAGAGAAGACAGCTTTTCAGCAGTTATACGCAAGCAGCback to top protein sequence of jgi.p|Trimin1|352861 >Trimin1|352861|estExt_Genemark1.C_Ctg_1340023 ID=Trimin1|352861|estExt_Genemark1.C_Ctg_1340023|Name=jgi.p|Trimin1|352861|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp MASPATPEFSFPNWTQSRNDSSAATKNSPLTEEVRKHVADVYIALACTLIback to top mRNA from alignment at Contig_134:143549..145376- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12311 ID=mRNA_12311|Name=jgi.p|Trimin1|352861|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1828bp|location=Sequence derived from alignment at Contig_134:143549..145376- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_134:143549..145376- >mRNA_12311 ID=mRNA_12311|Name=jgi.p|Trimin1|352861|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_134:143549..145376- (Tribonema minus UTEX_B_3156 )back to top |