mRNA_12270 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|173004
Unique NamemRNA_12270
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A835YI94_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI94_9STRA)

HSP 1 Score: 912 bits (2358), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 1
Query:    1 MPSADSEEGPREGSDEESQEQQRDPLLDNHHLDDIDWQAVLSSPARVLGLVAALCALLLLGDAGTASKIWSAVLPQYNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDLAKLPTPSTRTLCRVD 1353
            MPSADSEEGPREGSDEESQEQQRDPLLDNHHLDDIDWQAVLSSPARVLGLVAALCALLLLGDAGTASKIWSAVLPQYNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDLAKLPTPSTRTLCRVD
Sbjct:    1 MPSADSEEGPREGSDEESQEQQRDPLLDNHHLDDIDWQAVLSSPARVLGLVAALCALLLLGDAGTASKIWSAVLPQYNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDLAKLPTPSTRTLCRVD 451          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A835ZBJ0_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ0_9STRA)

HSP 1 Score: 341 bits (874), Expect = 6.720e-111
Identity = 193/387 (49.87%), Postives = 241/387 (62.27%), Query Frame = 1
Query:  193 TASKIWSAVLPQYNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPES---------DGAAGTQGVSKHYVAELQL--GEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDLAKLP 1320
            +A+ + SA  P+     YCP  P    DRRP+P RLRIVALNAEYLM+D   GC++ WHGCPW  A  A  HL NVA A+A L+AD+ISL+EVRSC ELR LA+LL   YAPYMV G DTYT QN+GLL+RVDPV D+WR++ARA +P+  S CG  S         DG+  T GVSK+YVA+L L  G+ K+A+VG H LA     +     RCA+REAQA+V+R TV  LA+ GA V+ LGDFNDFD   P  ++             GD           +     G       L ++  +V    R S W D ++DC I G AELSL+DHVLVTEGL GAVA   I   YGP +G QK C +  +YVSDHWP+VVDFDL+++P
Sbjct:   15 SAAVLSSAADPK----AYCPKVPREPGDRRPNPDRLRIVALNAEYLMYDVDSGCQEAWHGCPWMDAQHAKHHLENVAKAIASLDADIISLAEVRSCAELRALAALLPGGYAPYMVDGRDTYTAQNVGLLTRVDPVADVWRTNARAAYPIEGSVCGYSSSXXXXXXXXDGS--TYGVSKNYVAQLALFGGDLKIAVVGLHLLAHPGSVE-----RCARREAQASVLRATVEALAAGGAEVIALGDFNDFDAIAPGESA-------------GDACSG------GIGGGGSGCGGGAAQLYNLCARVPARTRFSAWWDKDQDCTIDGAAELSLLDHVLVTEGLAGAVAGVRIAHEYGPFRG-QKACVNSDAYVSDHWPIVVDFDLSRVP 370          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0DLD7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DLD7_9ZZZZ)

HSP 1 Score: 228 bits (582), Expect = 1.350e-67
Identity = 135/363 (37.19%), Postives = 198/363 (54.55%), Query Frame = 1
Query:  229 YNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFD--ASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELV-LQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDL 1308
            Y     C  AP+   DRR +   LRIV  N E+L  D  AS  C    +GC W  ++ A  HL  V+  ++ L  D+I++ E+  CDEL  L + +  +Y PY+++G+DT T QN+G+L+++DPV +L+RSDAR T+P+  S CG    G   T GVSKHYV E  + +  +AL+GAH LA    +     +RC+QREAQA V++  V G       V++LGDFND+D  + DS  + P SQ L +++  ++  N                 S L  L ++  K+    R++ W D N DC  S   E S++DH+LVT+ L   V+ A I   Y       + C    +Y SDH+PV++D DL
Sbjct:   21 YAADTQCYIAPVNSNDRRNNKTTLRIVQYNTEWLFIDYYASSDCPG--NGCTWKNSSQAEIHLSYVSKIVSELRPDIINICEIEGCDELNMLKTSISYEYLPYLIKGTDTSTGQNVGVLTKIDPVINLYRSDARETYPIYGSKCG--YSGTPSTTGVSKHYVTEYNINKINIALIGAHLLAFPTDS-----ARCSQREAQALVLQSIVLGYIKKNFEVILLGDFNDYDNEITDSNKDLPTSQVLDILKGKNIKTN-----------------SNLYKLNNIASKMPTQDRYTEWYDKNNDCKSSSN-EFSMIDHILVTDNLFNKVSNAFIYHIY------DEFCN---TYNSDHYPVIIDIDL 347          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0EDC0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EDC0_9ZZZZ)

HSP 1 Score: 227 bits (578), Expect = 5.330e-67
Identity = 133/356 (37.36%), Postives = 192/356 (53.93%), Query Frame = 1
Query:  247 CPHAPLWGQDRRPDPGRLRIVALNAEYLMFD--ASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDL 1308
            C   P    DRR +   LRIV  N E+L  D  AS  C    +GC W  +  A  HL  V+  +A L  D+I++ E+  CDEL  L + +  +Y PY+++G+DT T QN+G+LS++DP+ +L+RSDAR T+P+  S CG    G   T GVSKHY+ E  + +  + L+GAH LA    +     +RCA+REAQA V++  V G       V++LGDFND+D  + DS  + P SQ L +++  D+  N                 S   L S+  K+    R++ W D N DC  S   E S++DH+LVT+ L   V+ A I   Y       + C    +Y SDH+PV++D DL
Sbjct:   27 CYIVPSNSNDRRNNKTSLRIVQYNTEWLFIDYYASSDCPG--NGCTWKNSTEAEIHLSYVSKIIADLKPDIINICEIEGCDELNMLRTSISDEYLPYLIKGTDTSTGQNVGMLSKIDPLINLYRSDARETYPIYGSKCG--YSGTPSTTGVSKHYITEYVINKINIVLIGAHLLAFPTDS-----TRCAEREAQALVLQNIVLGYIKKQFEVILLGDFNDYDNEIMDSNKDIPTSQVLDILKGKDIKTN----------------SSFYKLNSIASKIPNHDRYTEWYDKNNDCKSSAN-EFSMIDHILVTDNLFNKVSNAFIYHVY------DEFCN---TYNSDHYPVIIDIDL 347          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0AQ34_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AQ34_9ZZZZ)

HSP 1 Score: 213 bits (541), Expect = 1.500e-61
Identity = 118/352 (33.52%), Postives = 186/352 (52.84%), Query Frame = 1
Query:  247 CPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDF 1302
            CP  P    DRR D  + RI+  N E+L  D +   K    GC W     A  H+  VA  +  L  D+I+  E+  CDEL  L+  L   YAPY+ QG+DT T QN+G+L+RVDP+T+L+R++ R ++P+P S CG      +GT GVSKHY+ E  +  +K+AL+ AHF+A           RCAQREAQA+V++  +    +    +++LGDFND+D  + D  SN P S+ L ++                 +   G   ++  L ++   +  + R+S W + + +C  +   + S++DH+LVT+ +   +  + I        G ++ C     Y SDH+PV++D 
Sbjct:   24 CPIVPTSLGDRRKDKNKFRIIQYNVEWLFIDYNSQSKCPGSGCTWVNQTEAQTHMDYVATIVNELEPDLINFCEIEGCDELNILSEYLDGSYAPYLKQGTDTATGQNVGMLTRVDPITNLYRTENRYSYPIPGSNCGYTG---SGTTGVSKHYITEFNINNNKIALIAAHFIAIPT-----DTQRCAQREAQASVLQEVIMNYINTNYEIIMLGDFNDYDSEILDMNSNKPKSKVLDIL-----------------KGIAGEFANKYELFNIAETITQNERYSDWYNSDNNCNTNTNNDFSMIDHILVTDYIKKNIINSSI------YHGYKEFCG---KYNSDHFPVIIDL 341          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0IJR9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IJR9_9ZZZZ)

HSP 1 Score: 208 bits (529), Expect = 8.480e-60
Identity = 127/353 (35.98%), Postives = 186/353 (52.69%), Query Frame = 1
Query:  247 CPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLG-SDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDF 1302
            CP     G DRR D  +LR+V  NAE+L  D          GC WS A+ A  H+  V   +  LN D+I+  E+  CDEL  + S+L  + Y PY+ +G+D+ T QN+G+L+R+DP+  L+R++ +  +P+  S CG    G+ G   VSKHY+ E +LG   VA + AH LA          SRCAQRE QA+V++  +    S    V++LGD NDFD  V D  +N P SQ L++++ G+                 G    +  L SV   V  S R+S W D + +C      + S++DHVLV++G++  +   D   FY       + C    +Y SDH+PVV+DF
Sbjct:   22 CPIVTSSG-DRRQDKNKLRLVQYNAEWLFIDYYSSANCPGSGCSWSNASEAQTHMSYVTKVIHDLNPDIINFCEIEGCDELNMVKSMLNDATYTPYLKKGTDSATGQNVGMLTRIDPLVSLYRTEEKYDYPIQGSQCGYTGSGSTG---VSKHYITEFKLGNMNVAFIAAHLLAIPT-----ESSRCAQREGQASVLQPVIADYISRKYEVIILGDLNDFDGEVLDVNNNKPTSQVLNILK-GNF----------------GEYAGKYELTSVAESVTQSERYSDWYDSDDNCNTQSSKDYSMIDHVLVSQGVLNKI---DNVFFY---HAYPESCV---TYNSDHYPVVIDF 339          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: W7TCM2_9STRA (Endonuclease exonuclease phosphatase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCM2_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.190e-59
Identity = 145/407 (35.63%), Postives = 193/407 (47.42%), Query Frame = 1
Query:  229 YNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEG---CKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSD-------------------YAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAA------------------------GTQGVSKHYVAELQLGEH--KVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFD 1305
            Y     C  AP   +DRRP P RLRIV  N E+   D SEG   C      CPW  A  AH H L +A  L  L  D+++L EV  CDE+  LA+ L  +                   Y  ++++G DT+T QN  LL+R+DP TDL RS  R  +PLP S CG E+  A+                        G  GVSKHY     L E   K+A+VG H LA  R  D     RCA+REAQA V+RG V G  + G  VVVLGDFNDFD  VPD  +N P S+ + +++  D+                 +P +  + Q+         R++ W D N +C +    EL ++DHVL+T+GL   V A  +   Y    G         +  SDH+PVV+D +
Sbjct:   46 YRENYTCHFAPSIPEDRRPSPYRLRIVQFNVEFFFLDQSEGGLVCPGP--DCPWPDAETAHAHALRIANVLKELRPDIVNLCEVEGCDEINWLATRLNEEASERVQEEAGPDTPTQAFGYNYFLLKGQDTFTGQNTALLTRIDPSTDLDRSTDRVPYPLPGSQCGWETRRASAWAGGNFRQQFGDRTNGHIGGSADGQAGVSKHYFTTFHLQEVGVKIAIVGIHLLA--RPIDP---ERCAEREAQATVLRGVVDGFIAEGYEVVVLGDFNDFDGSVPDINNNLPTSRVMEILKGTDL-----------------FPTATFLPQA--------ERYTDWWDRNGNCQVDAPEELDMIDHVLLTKGLQERVIAVYVYHAYDEYCG---------TLDSDHYPVVIDLE 411          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0HDX1_9ZZZZ (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HDX1_9ZZZZ)

HSP 1 Score: 207 bits (527), Expect = 1.540e-59
Identity = 127/360 (35.28%), Postives = 193/360 (53.61%), Query Frame = 1
Query:  232 NGGLYCPHAPLWG-QDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDL 1308
            NG   CP+ P+    DRR +   + I+  N E+L  D  +      +GC W  ++ A+ H+  V+  +  +N D+I+L EV  CDEL+ L   L S Y P++ +G DT T QN+GL++R+DP+ DL+R++ R ++P+  S CG    G   T GVSKHY+ E ++G   +A +G HF+A    +      RCAQREAQA VI+  V         V++LGDFNDFD  V D+ S+ P S+ L +++ G+  +N             G+      LQ+   K+  S+R + W D N +C  S   E S++DH+L+T  L   V  A I       Q  ++ C    +Y SDH+PV++   L
Sbjct:   14 NGDTECPYVPISRVNDRRIEQSAVTIMQYNVEWLFVDYYKSSDCPGNGCSWKNSSEANTHIEYVSKIIKDINPDIINLCEVEGCDELKLLKDALDSTYNPFLKKGKDTSTGQNVGLITRIDPLVDLYRTEERISYPINGSNCG--YTGPTDTSGVSKHYITEYKIGNMNIAFIGVHFVAFPTDS-----VRCAQREAQAQVIQNVVYSYIKKNYEVILLGDFNDFDSEVLDANSDKPFSRVLDILK-GNYGLN------------KGF----FQLQNAAEKIPQSQRFTAWWDSNSNCK-STKTEFSMIDHILLTPTLREKVIEAYI------YQDYEEFCG---TYNSDHYPVIIKIAL 339          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0ET28_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ET28_9ZZZZ)

HSP 1 Score: 203 bits (517), Expect = 4.750e-58
Identity = 115/354 (32.49%), Postives = 181/354 (51.13%), Query Frame = 1
Query:  247 CPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQT--GDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDF 1302
            CP     G DRR D  + R+V  N E+L  D          GC W   + A  H+  V+  + +LN D+I+  EV  CDEL  L   L   Y PY+ +G+DT T QN+G+L+RVDP+  L+R++ +  +P+P S CG    G+ G+ GVSKHY+ E  +   K+A + AH LA    +     +RC+QREAQA++++  +    +    ++++GDFND+D  + D  +N P S  L +++   GD                      +  L ++   ++ + R+S W D + +C  +   + S++DH+LVT G+  ++  A I   Y    G          Y SDH+PVVVD 
Sbjct:   21 CPTITAIG-DRRKDKTKFRLVQYNVEWLFIDYYSNMDCPGDGCTWKNQSEAETHMNYVSDIVKKLNPDLINFCEVEGCDELNILKDKLDETYTPYLKKGTDTSTGQNVGMLTRVDPLKSLYRTEMKYNYPIPGSKCG--YTGSTGSTGVSKHYITEFTISNKKIAFIAAHLLAIPTDS-----ARCSQREAQASILQSIIYDYITRNYEIIMIGDFNDYDAEILDMNNNKPISYVLDILKGLYGDFK-------------------GKYTLNNIAANINQTSRYSDWWDSDNNCTTASNKDYSMIDHILVTTGIKNSIINAFIYHGYSEYCG---------KYNSDHYPVVVDL 338          
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Match: A0A6C0HHG6_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HHG6_9ZZZZ)

HSP 1 Score: 199 bits (506), Expect = 2.840e-56
Identity = 128/365 (35.07%), Postives = 179/365 (49.04%), Query Frame = 1
Query:  220 LPQYNGGLYCPHAPLWGQDRRPDPGRLRIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNADVISLSEVRSCDELRTLAS---LLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVTDLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVGAHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFNDFDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELVLQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAAADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFD 1305
            + Q +    CP  P+   DRRP     RIV  N E+L  D           C W   + A  H+  V+  +A L  D+++L EV  CDEL  L S   L    Y PY+ QG+DT T QN+G+L+R+DP+  L+R++ +  +PLP S CG    G+ GT GVSKHY+ E +     VA++G H LA          +RCA+REAQA VI+  +    +    +VVLGDFNDFD  V D   N P S+ L +++  D                 G    + +L +V   +  S R + W D N D V S   E S++DHVL+T  +   +    +   Y    G          Y SDH+PVV+D D
Sbjct:   20 ISQLSADTQCPIVPITPSDRRPSKNTFRIVQYNVEWLFVDYYAPMDCPGTHCTWVNQSEALIHMKYVSDVVATLQPDILNLCEVEGCDELNMLCSPNYLDDESYKPYLKQGTDTSTGQNVGMLTRLDPLISLFRTEEKVQYPLPGSNCG--YTGSPGTTGVSKHYITEYKWYGRPVAIIGLHLLAYPE-----DPTRCAEREAQAQVIQNVIVQYIAKEYEIVVLGDFNDFDAEVVDLNDNVPSSRVLRILKGLD-----------------GKYTGQYILHNVAADMPQSERWTDWWDQNADGV-SSPTEFSMIDHVLMTPFIQTKIINVGVYHGYDEFYG---------KYNSDHYPVVIDMD 350          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173004 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YI94_9STRA0.000e+0100.00Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A835ZBJ0_9STRA6.720e-11149.87Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A6C0DLD7_9ZZZZ1.350e-6737.19Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0EDC0_9ZZZZ5.330e-6737.36Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0AQ34_9ZZZZ1.500e-6133.52Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0IJR9_9ZZZZ8.480e-6035.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
W7TCM2_9STRA1.190e-5935.63Endonuclease exonuclease phosphatase n=2 Tax=Nanno... [more]
A0A6C0HDX1_9ZZZZ1.540e-5935.28Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6C0ET28_9ZZZZ4.750e-5832.49Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0HHG6_9ZZZZ2.840e-5635.07Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_99contigContig_99:377908..379384 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|173004|e_gw1.99.3.1
DescriptionEndonuclease exonuclease phosphatase. Source PGD
COG categoryS
Max annot lvl33154|Opisthokonta
EggNOG OGs2AJTD@1|root,2RZ7W@2759|Eukaryota,3AMVC@33154|Opisthokonta
Evalue9.4e-53
Seed ortholog192875.XP_004348379.1
Hectar predicted targeting categoryother localisation
TranscriptId173326
TrackFilteredModels1
ProteinId173004
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173004gene_12270Tribonema minus UTEX_B_3156 geneContig_99 377908..379384 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173004Trimin1|173004|e_gw1.99.3.1Tribonema minus UTEX_B_3156 polypeptideContig_99 377908..379384 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12270_2exon_12270_2Tribonema minus UTEX_B_3156 exonContig_99 377908..378795 -
exon_12270_1exon_12270_1Tribonema minus UTEX_B_3156 exonContig_99 378917..379384 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12270CDS_12270Tribonema minus UTEX_B_3156 CDSContig_99 378917..379384 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12270 ID=mRNA_12270|Name=jgi.p|Trimin1|173004|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1356bp|location=Sequence derived from alignment at Contig_99:377908..379384- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTTCGGCAGACTCTGAGGAGGGCCCTCGCGAAGGGTCTGACGAAGA
AAGCCAGGAACAACAACGCGATCCGCTTCTAGATAACCATCATCTTGACG
ACATCGATTGGCAGGCGGTGCTGTCTTCACCGGCTAGGGTTCTGGGGCTA
GTAGCAGCTCTGTGTGCCCTCCTGCTTTTGGGAGATGCTGGCACTGCCAG
CAAAATCTGGTCTGCTGTGCTTCCACAGTACAATGGCGGCCTCTACTGCC
CACATGCGCCGCTGTGGGGGCAAGACCGACGCCCTGACCCAGGTCGTCTA
CGCATTGTTGCGCTGAACGCGGAATACCTGATGTTCGACGCCTCAGAAGG
CTGCAAGCAGCAGTGGCATGGGTGTCCCTGGAGCACCGCTGCTGCTGCTC
ACCGCCACTTGCTAAACGTGGCCATAGCGCTGGCGCGATTGAATGCGGAT
GTGATAAGTCTGTCGGAGGTGCGGTCCTGCGATGAGCTGCGCACCCTCGC
CAGTCTGCTGGGCAGCGATTACGCGCCGTACATGGTGCAAGGGAGCGACA
CGTACACGCACCAGAACATGGGCCTTCTCAGCCGCGTCGACCCCGTTACC
GACCTCTGGCGCTCAGACGCGCGTGCCACGTGGCCGCTCCCCAGCAGCGC
CTGCGGCCCCGAAAGCGACGGCGCCGCGGGCACGCAGGGCGTGAGCAAGC
ACTACGTGGCGGAGCTGCAGCTCGGCGAGCACAAGGTGGCTCTGGTCGGG
GCGCACTTTCTGGCGGGCACCAGGGGCGCAGACGCGCGCAGCCGCAGCCG
CTGCGCGCAGCGCGAGGCGCAGGCGGCGGTGATCCGCGGCACGGTCACCG
GGCTGGCCTCGCACGGCGCGCACGTCGTCGTGCTCGGCGACTTCAACGAC
TTCGACCGCTTCGTGCCGGACTCCACGTCCAACGCGCCGCACTCGCAGGC
GCTGCACCTGATGCAGACGGGCGACGTCAGCGTGAACCCGTACGACGCGC
TGCCGCGGCTGCAGCGTAGCGCGCCGGGGTGGCCGTGCTCCGAACTCGTT
CTCCAGAGCGTGATGGGAAAGGTCGACTTCAGCAGGCGGCACAGCGTGTG
GAGCGATCTCAACAAAGATTGCGTCATAAGCGGGGGGGCGGAGCTGTCCT
TGGTCGATCATGTGCTGGTGACAGAGGGGCTTGTGGGTGCAGTAGCGGCA
GCCGACATTCCGCTGTTTTACGGGCCTGTTCAGGGAGGCCAGAAGATGTG
CAAGGACGATCCTAGTTACGTGAGTGACCATTGGCCGGTTGTAGTAGACT
TTGACCTTGCCAAATTGCCAACACCCAGCACTCGCACATTGTGCAGAGTG
GACTGA
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protein sequence of jgi.p|Trimin1|173004

>Trimin1|173004|e_gw1.99.3.1 ID=Trimin1|173004|e_gw1.99.3.1|Name=jgi.p|Trimin1|173004|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=452bp
MPSADSEEGPREGSDEESQEQQRDPLLDNHHLDDIDWQAVLSSPARVLGL
VAALCALLLLGDAGTASKIWSAVLPQYNGGLYCPHAPLWGQDRRPDPGRL
RIVALNAEYLMFDASEGCKQQWHGCPWSTAAAAHRHLLNVAIALARLNAD
VISLSEVRSCDELRTLASLLGSDYAPYMVQGSDTYTHQNMGLLSRVDPVT
DLWRSDARATWPLPSSACGPESDGAAGTQGVSKHYVAELQLGEHKVALVG
AHFLAGTRGADARSRSRCAQREAQAAVIRGTVTGLASHGAHVVVLGDFND
FDRFVPDSTSNAPHSQALHLMQTGDVSVNPYDALPRLQRSAPGWPCSELV
LQSVMGKVDFSRRHSVWSDLNKDCVISGGAELSLVDHVLVTEGLVGAVAA
ADIPLFYGPVQGGQKMCKDDPSYVSDHWPVVVDFDLAKLPTPSTRTLCRV
D*
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mRNA from alignment at Contig_99:377908..379384-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12270 ID=mRNA_12270|Name=jgi.p|Trimin1|173004|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1477bp|location=Sequence derived from alignment at Contig_99:377908..379384- (Tribonema minus UTEX_B_3156 )
ATGCCTTCGGCAGACTCTGAGGAGGGCCCTCGCGAAGGGTCTGACGAAGA AAGCCAGGAACAACAACGCGATCCGCTTCTAGATAACCATCATCTTGACG ACATCGATTGGCAGGCGGTGCTGTCTTCACCGGCTAGGGTTCTGGGGCTA GTAGCAGCTCTGTGTGCCCTCCTGCTTTTGGGAGATGCTGGCACTGCCAG CAAAATCTGGTCTGCTGTGCTTCCACAGTACAATGGCGGCCTCTACTGCC CACATGCGCCGCTGTGGGGGCAAGACCGACGCCCTGACCCAGGTCGTCTA CGCATTGTTGCGCTGAACGCGGAATACCTGATGTTCGACGCCTCAGAAGG CTGCAAGCAGCAGTGGCATGGGTGTCCCTGGAGCACCGCTGCTGCTGCTC ACCGCCACTTGCTAAACGTGGCCATAGCGCTGGCGCGATTGAATGCGGAT GTGATAAGTCTGTCGGAGGTGAGCAACGCCACGAATCGCTGTTTCTGCGC ACCGCTAGGTATATCATGACTGCATTTCGGCTTGATGCGCAACGCAGCGC CCACCGTACTCCTCCCCGCCTCTGTCCTGATGGCCGCAGGTGCGGTCCTG CGATGAGCTGCGCACCCTCGCCAGTCTGCTGGGCAGCGATTACGCGCCGT ACATGGTGCAAGGGAGCGACACGTACACGCACCAGAACATGGGCCTTCTC AGCCGCGTCGACCCCGTTACCGACCTCTGGCGCTCAGACGCGCGTGCCAC GTGGCCGCTCCCCAGCAGCGCCTGCGGCCCCGAAAGCGACGGCGCCGCGG GCACGCAGGGCGTGAGCAAGCACTACGTGGCGGAGCTGCAGCTCGGCGAG CACAAGGTGGCTCTGGTCGGGGCGCACTTTCTGGCGGGCACCAGGGGCGC AGACGCGCGCAGCCGCAGCCGCTGCGCGCAGCGCGAGGCGCAGGCGGCGG TGATCCGCGGCACGGTCACCGGGCTGGCCTCGCACGGCGCGCACGTCGTC GTGCTCGGCGACTTCAACGACTTCGACCGCTTCGTGCCGGACTCCACGTC CAACGCGCCGCACTCGCAGGCGCTGCACCTGATGCAGACGGGCGACGTCA GCGTGAACCCGTACGACGCGCTGCCGCGGCTGCAGCGTAGCGCGCCGGGG TGGCCGTGCTCCGAACTCGTTCTCCAGAGCGTGATGGGAAAGGTCGACTT CAGCAGGCGGCACAGCGTGTGGAGCGATCTCAACAAAGATTGCGTCATAA GCGGGGGGGCGGAGCTGTCCTTGGTCGATCATGTGCTGGTGACAGAGGGG CTTGTGGGTGCAGTAGCGGCAGCCGACATTCCGCTGTTTTACGGGCCTGT TCAGGGAGGCCAGAAGATGTGCAAGGACGATCCTAGTTACGTGAGTGACC ATTGGCCGGTTGTAGTAGACTTTGACCTTGCCAAATTGCCAACACCCAGC ACTCGCACATTGTGCAGAGTGGACTGA
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Coding sequence (CDS) from alignment at Contig_99:377908..379384-

>mRNA_12270 ID=mRNA_12270|Name=jgi.p|Trimin1|173004|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1356bp|location=Sequence derived from alignment at Contig_99:377908..379384- (Tribonema minus UTEX_B_3156 )
ATGCCTTCGGCAGACTCTGAGGAGGGCCCTCGCGAAGGGTCTGACGAAGA
AAGCCAGGAACAACAACGCGATCCGCTTCTAGATAACCATCATCTTGACG
ACATCGATTGGCAGGCGGTGCTGTCTTCACCGGCTAGGGTTCTGGGGCTA
GTAGCAGCTCTGTGTGCCCTCCTGCTTTTGGGAGATGCTGGCACTGCCAG
CAAAATCTGGTCTGCTGTGCTTCCACAGTACAATGGCGGCCTCTACTGCC
CACATGCGCCGCTGTGGGGGCAAGACCGACGCCCTGACCCAGGTCGTCTA
CGCATTGTTGCGCTGAACGCGGAATACCTGATGTTCGACGCCTCAGAAGG
CTGCAAGCAGCAGTGGCATGGGTGTCCCTGGAGCACCGCTGCTGCTGCTC
ACCGCCACTTGCTAAACGTGGCCATAGCGCTGGCGCGATTGAATGCGGAT
GTGATAAGTCTGTCGGAGGTGCGGTCCTGCGATGAGCTGCGCACCCTCGC
CAGTCTGCTGGGCAGCGATTACGCGCCGTACATGGTGCAAGGGAGCGACA
CGTACACGCACCAGAACATGGGCCTTCTCAGCCGCGTCGACCCCGTTACC
GACCTCTGGCGCTCAGACGCGCGTGCCACGTGGCCGCTCCCCAGCAGCGC
CTGCGGCCCCGAAAGCGACGGCGCCGCGGGCACGCAGGGCGTGAGCAAGC
ACTACGTGGCGGAGCTGCAGCTCGGCGAGCACAAGGTGGCTCTGGTCGGG
GCGCACTTTCTGGCGGGCACCAGGGGCGCAGACGCGCGCAGCCGCAGCCG
CTGCGCGCAGCGCGAGGCGCAGGCGGCGGTGATCCGCGGCACGGTCACCG
GGCTGGCCTCGCACGGCGCGCACGTCGTCGTGCTCGGCGACTTCAACGAC
TTCGACCGCTTCGTGCCGGACTCCACGTCCAACGCGCCGCACTCGCAGGC
GCTGCACCTGATGCAGACGGGCGACGTCAGCGTGAACCCGTACGACGCGC
TGCCGCGGCTGCAGCGTAGCGCGCCGGGGTGGCCGTGCTCCGAACTCGTT
CTCCAGAGCGTGATGGGAAAGGTCGACTTCAGCAGGCGGCACAGCGTGTG
GAGCGATCTCAACAAAGATTGCGTCATAAGCGGGGGGGCGGAGCTGTCCT
TGGTCGATCATGTGCTGGTGACAGAGGGGCTTGTGGGTGCAGTAGCGGCA
GCCGACATTCCGCTGTTTTACGGGCCTGTTCAGGGAGGCCAGAAGATGTG
CAAGGACGATCCTAGTTACGTGAGTGACCATTGGCCGGTTGTAGTAGACT
TTGACCTTGCCAAATTGCCAACACCCAGCACTCGCACATTGTGCAGAGTG
GACTGA
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