mRNA_12226 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A835YG93_9STRA (Ap4A_phos_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG93_9STRA) HSP 1 Score: 613 bits (1580), Expect = 1.130e-220 Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1 Query: 1 MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC 1008 MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC Sbjct: 1 MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASWGAC 336
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: UPI001A90AAD7 (DUF4922 domain-containing protein n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A90AAD7) HSP 1 Score: 134 bits (338), Expect = 9.100e-34 Identity = 74/164 (45.12%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 37 ERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHAD 528 ER R+TS+ ALA G+L + T ++ D PF V L AKK G V R R NPF N +PAL+V ++G+R+ C+LNKFNV++DH L++T FEPQ APL D + +PG+GFFN GP +GASQ HRH+QLVP +L L D Sbjct: 7 ERVRETSRRALASGALESIKTERLLIADPNWPFQVRILTS---LAKKHG---VSTRLARAQTQVHNPFL--NPEPALLVCEMGSRYRCVLNKFNVVEDHLLLVTRQFEPQQAPLEEADFDVLLKAIEQMPGLGFFNGGPGAGASQPHRHLQLVPEHSLGPLPVD 162
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158G0B8_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia humi TaxID=326474 RepID=A0A158G0B8_9BURK) HSP 1 Score: 132 bits (333), Expect = 5.020e-33 Identity = 85/205 (41.46%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLD 660 RQT A LA G+LRP+AT ++D G+PF V + ++A KK + + P NPF D LVV D+G RH +LNKFNV+D H LI+T FEPQ A L A D A FA +T + G+GF+NSGP++GASQ H+H+Q+VP R+ ALP+ L+ AA + T+P L HA LD Sbjct: 12 RQTQHA-LACGALRPIATIEKTIEDAGVPFLVRQVS--SVARKKEA-------RTMQTAAPSNPFF--PCDDNLVVADIGERHILLLNKFNVIDHHLLIVTREFEPQQALLDATDFDALFACLTQIDGLGFYNSGPEAGASQPHKHLQIVPLPLGRS------DSALPIEPLLAAACSG-----------TVPGLPFAHAFARLD 187
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158KEF6_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia terrestris TaxID=1226301 RepID=A0A158KEF6_9BURK) HSP 1 Score: 131 bits (330), Expect = 1.380e-32 Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTV---FSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAA 573 R+ ++ ALA G+LRP+AT ++D G+PF V S+ K A K R A P NPF +R+ LVV D+G RH +LNKFNV+D H LI+T FEPQ A L A D A FA + + G+GF+NSGP++GASQ H+H+Q+VP L PALP+ L+ AA Sbjct: 11 RRQTQHALACGALRPIATIGKTIEDAGVPFLVRQVSSVGRKDEAKKARDAA------------PSNPFLPCDRN--LVVADIGERHILLLNKFNVIDHHLLIVTREFEPQQALLDASDFDALFACLAQIDGLGFYNSGPEAGASQPHKHLQIVP------LPLGQPGPALPIEPLLAAA 169
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A2T4V0F9_VITXG (ATP adenylyltransferase n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4V0F9_VITXG) HSP 1 Score: 129 bits (324), Expect = 2.290e-31 Identity = 79/208 (37.98%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 40 RARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDP 663 R +T++ ALA G+L+P+AT +++ +PF V L L + ++++ P NPF EN DP +VVGDV HTC+LNKFNV++ H L++T FE Q +PLTA D A ++ L G+ F+NSG +GASQRH+H+QL+P + L A P+ TL+ A P G T+P L H + L P Sbjct: 20 RTLETTRNALATGALQPIATECQTLEEREVPFQVRVLGRAHLKDDRA-------KREKPRAAPFNPF--ENPDPVMVVGDVPPAHTCMLNKFNVVEHHLLLVTRIFEEQESPLTAADFEALAFCMSGLDGLAFYNSGEMAGASQRHKHLQLIPPLGPQGLRA-------PMETLLSAP-------PARGHVTTVPALNFLHVLTGLGP 204
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: UPI00194DE2BD (phosphorylase n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI00194DE2BD) HSP 1 Score: 129 bits (323), Expect = 2.930e-31 Identity = 106/320 (33.12%), Postives = 144/320 (45.00%), Query Frame = 1 Query: 49 QTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFT---LPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARAPRTPPPASTSTRWASW 999 QT+ ALA G+L P+AT + DGGIPF V +D A A ++ R S P NPF +PAL V D+ H C+LNKFNV++ H L+IT + Q + LT +D AA+ + A+ G+GF+NSGP SGASQ H+H+QLVP+ D T LP+ ++ P P T L L +H + L D ++GA L+ Y LL +G T P + YNL+LTRD+M VVAR+R P S +A W Sbjct: 18 QTTTQALASGALMPIATHTHTLADGGIPFVVRLVDSLARKAHHEKA-----QRDRPSRQPANPFL--PYEPALFVADLSPTHVCLLNKFNVVEHHLLVITRDYVAQESWLTLEDFAAWARCIQAIDGLGFYNSGPISGASQHHKHLQLVPFAD------DDGTATLPMAQIL----------PPPSTASTPAFLSSLPFQHRWQPLHLDWRQD----------HHSLGAQLRLTYRHLLAALG----------LTLTTPHPE----------------------QPYNLLLTRDWMMVVARSR-PGYADIGVNSLGYAGW 271
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A4U1IFM8_9BURK (Phosphorylase n=1 Tax=Trinickia sp. 7GSK02 TaxID=2571161 RepID=A0A4U1IFM8_9BURK) HSP 1 Score: 127 bits (320), Expect = 1.070e-30 Identity = 87/211 (41.23%), Postives = 114/211 (54.03%), Query Frame = 1 Query: 46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPAVAGD 678 +QTS A L G+L+P+A+ + D G+ F V + A ++ A + + +P NPF DP L V D+ H +LNKFNV+D H LI+T SF PQ PL A D AA+ A + G+GF+NS ++GASQ H+H+Q+VP L A LP+ LV AAA R GA TLP L RHA LDPA AGD Sbjct: 18 KQTSHA-LHCGALQPIASDERTIDDAGVRFIVRQVSSLA----RKNAAKTAPAARTVASVPVNPFL--PHDPNLFVADISETHFALLNKFNVIDHHLLIVTRSFIPQDTPLDAADFAAWLACLAEFDGLGFYNSCTEAGASQPHKHLQIVP------LPLGAAGLRLPIEPLV---AAAQWR----GAIGTLPGLPFRHAFAALDPA-AGD 207
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A836C9Y6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Y6_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.980e-30 Identity = 114/321 (35.51%), Postives = 153/321 (47.66%), Query Frame = 1 Query: 49 QTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLD-----EKALAAKKRGGASVCGRKQRFSGLPP----------NPFAGENRDPALVVGD-VGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPG----ATFTLPQLKLRHAVRLLDPAVAGDCGGSXXXXXXXXAVGAYLKRQYDELLRDVGYAFPVLRANSFTGQAPFDDIAGAAAXXXXXXXXXXXXXXXXAGYNLVLTRDYMFVVARARA 951 + + A+ A G L+P+ATS V DGGI F V ++ EKA + GA+ G +PFA E+RD +VV V H +LNKF L HAL++T++F Q+ PLTA D AA++A V A VGFFNS ++GASQRH+HMQLVP L + + LP+++ + A A A F LP K +H + LL P A G XXXXX G L Y LLR G +L + G F AG++ A +N++LT +M VV RARA Sbjct: 1180 RATHASAAAGLLKPIATSCRRVHDGGIDFIVSTVSAARQAEKAAKSNLTPGAADGGXXXXXXXXXXXXXXXXXXARDPFARESRDARMVVAPRVPPEHVLVLNKFPTLAGHALLVTDAFREQATPLTAGDFAAWYAVVAAADAVGFFNSAAEAGASQRHKHMQLVP---LASFAPCTQSRGLPIDSAISMATARTSTVTAANDSEAAIFRLPNFKFKHGLTLLPPESALLHGXXXXXXX----AGMPLLAIYSALLRRTG----LLDCAAAPGDCAFAGGAGSSGCGDSGGGSTVAPAAALAPHNVLLTTRWMLVVPRARA 1489
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A158GD20_9BURK (ATP adenylyltransferase n=1 Tax=Caballeronia choica TaxID=326476 RepID=A0A158GD20_9BURK) HSP 1 Score: 124 bits (312), Expect = 8.990e-30 Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 1 Query: 46 RQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAA 573 RQT A LA G+LRP+ T+ T V+D + F V + +K RK+R + P NPF + D LVV D+G+ H +LNKFNV+D H LI+T FEPQ A +T D AA F + G+GF+N GP++GASQ H+H+Q+VP R P+LP+ L+ AA Sbjct: 17 RQTQHA-LACGALRPIETTQTTVEDANVTFLVRQVSS---VVRKE-----ADRKKREAAPPVNPFLPCDAD--LVVADIGDSHILLLNKFNVIDQHLLIVTRHFEPQEALITLSDFAALFVCLDQFDGLGFYNGGPEAGASQPHKHLQIVPLPLGRP------GPSLPIEPLLAAA 175
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Match: A0A2N7WG82_9BURK (Phosphorylase n=1 Tax=Trinickia soli TaxID=380675 RepID=A0A2N7WG82_9BURK) HSP 1 Score: 124 bits (310), Expect = 2.080e-29 Identity = 84/201 (41.79%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 64 ALAGGSLRPLATSHTVVQDGGIPFTVFSLDEKALAAKKRGGASVCGRKQRFSGLPPNPFAGENRDPALVVGDVGNRHTCILNKFNVLDDHALIITNSFEPQSAPLTADDLAAFFAGVTALPGVGFFNSGPQSGASQRHRHMQLVPYDTLRALHADATTPALPLNTLVRAAAAAARRAPRPGATFTLPQLKLRHAVRLLDPA 666 ALA G+LRP+ T T + D GI F V + +L K+R S QRF +PF DP L V DV H +LNKFNV+D H LI+T +FEPQ A L DD AA+FA +T +GF+N G ++GASQ H+HMQ+VP L + +LP+ L+ AA+ G TLP L HA L+PA Sbjct: 22 ALACGALRPIETVQTTLDDSGIRFVVRQVS--SLVGKRRQETSA---PQRFV----DPFL--PHDPDLFVADVSATHFALLNKFNVIDHHLLIVTRAFEPQEALLDLDDFAAWFACLTEFDALGFYNGGREAGASQPHKHMQVVP------LPLGDSGQSLPIAPLIEAASF-------DGPVGTLPGLPFGHAFARLEPA 198 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|339811 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1011bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTGCATCGACACAACGCAAAAGTTCCCTCTGCGGGAGCGGGCAAGGCAback to top protein sequence of jgi.p|Trimin1|339811 >Trimin1|339811|MIX48574_4_26 ID=Trimin1|339811|MIX48574_4_26|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp MCIDTTQKFPLRERARQTSKAALAGGSLRPLATSHTVVQDGGIPFTVFSLback to top mRNA from alignment at Contig_99:24202..25771- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1570bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_99:24202..25771- >mRNA_12226 ID=mRNA_12226|Name=jgi.p|Trimin1|339811|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1011bp|location=Sequence derived from alignment at Contig_99:24202..25771- (Tribonema minus UTEX_B_3156 )back to top |