mRNA_12111 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A836C987_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C987_9STRA) HSP 1 Score: 701 bits (1808), Expect = 2.330e-253 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 1 Query: 1 MNAVKEAPAAVGDAQTVDVLSAESPLAAAQAGNAGFRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENGEFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAFTA 1176 MNAVKEAPAAVGDAQTVDVLSAESPLAAAQAGNAGFRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENGEFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAFTA Sbjct: 1 MNAVKEAPAAVGDAQTVDVLSAESPLAAAQAGNAGFRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENGEFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAFTA 392
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: D7FNV1_ECTSI (Methyltransferase type 11 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV1_ECTSI) HSP 1 Score: 311 bits (798), Expect = 1.260e-99 Identity = 182/363 (50.14%), Postives = 221/363 (60.88%), Query Frame = 1 Query: 103 GFRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRI------QYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYT-ENGEFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 G ++ S A+D LF F PFF+ AR KIVKR+ LGV W VD ++R +YD L A V+ TP+YY +PFH Y EGNL WQAALEVEPSAI VHA+IYT + G +ER GDDKLR F R E+L+ P PKDI+D+GCSTGLSTL L+ TFP AR ITGVDLSPHML++ R L TR + R A R++Y++AA E TG+ DAS DLV L L +HELP ATR + EA RVLR GGA++FMDM+P SPAFQ++A NP AFAGFKSTEP+L +Y+SLD L GF +RSNS RHRT VA+ Sbjct: 108 GLKVVSKAIDTLFAFEPFFDYMVVEAREKIVKRSYTLGVGWAENVDGMRRNMDELQGEYDRLLDAKVS--TPSYYYAPFHCYPEGNLSWQAALEVEPSAICVHADIYTGKKGVYERHGDDKLRGNFHQRMKEMLK---GPEPKDILDIGCSTGLSTLKLAETFPLAR-ITGVDLSPHMLAVGRYFLRTREE----------------------------------------------QRHARGRVEYLHAAGEMTGMGDASMDLVSLSLTSHELPAEATREVFREAFRVLRPGGAISFMDMNPQSPAFQKLANNPFAFAGFKSTEPYLQEYISLDLGKELEAAGFRNPEVRSNSTRHRTCVAY 418
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: W7U5V8_9STRA (Methyltransferase type 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5V8_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.790e-83 Identity = 157/362 (43.37%), Postives = 197/362 (54.42%), Query Frame = 1 Query: 106 FRIASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQR------IQYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 +R+A + LF P F AR I+ R +GV W RV+ L+R +Y+ ++ V P YY+ PFHAY EGNL W A+E E +++SVHA YT E + DGD KLR F R E+L P IVD+GC+ G+ST L +FP+A + GVDLSP+ML++A+ L RP+ R+DYV+AA E GLPDAS DLV +CLV HELP A RA+ EA RVLR GGALAFMDMDP +PAFQR+ NPM FA FKSTEP+L +YV LD + LA GF + +R NSPRHRTVVAF Sbjct: 56 YRVADKVVGTLFSIDPIFNVLAKKARESIIARGEKIGVSWSERVEGLKRHMEELETEYEGVHRKRVVI--PEYYQKPFHAYKEGNLGWAPAIEFEAASLSVHAPTYTRGPTELQEDGDAKLRGNFHKRMKEMLAKFSF-VPSRIVDVGCAAGMSTFCLQASFPEAE-VLGVDLSPYMLAVAKYNLNARPEFAQVKR--------------------------------------------EGRVDYVHAAGEDLGLPDASVDLVSICLVNHELPNEAARAVFREAHRVLRPGGALAFMDMDPTAPAFQRIVKNPMLFALFKSTEPWLKEYVVLDLPSELARAGFSHMDVRGNSPRHRTVVAF 369
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A836BXJ9_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXJ9_9CHLO) HSP 1 Score: 262 bits (669), Expect = 2.460e-81 Identity = 150/354 (42.37%), Postives = 206/354 (58.19%), Query Frame = 1 Query: 124 ALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSA--DVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGAPAP--KDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 A++ LFKFPPFF+ AK +AR+ IVKR LG DW+ + +LQ ++A + A D A P+YY PFHAY++GNLCW+AALEV +A SVHA + G + + +GD +LRS++ +R E + + GA + IVDLGC++GLS+ L R FP A +TGVDLSP+ L++ R + R P + +V+ AAE+TGL ADLV +CLVAHELP AT+AI+ EA R+LR GG + M+M+P SP FQR+ +NP A+ FKSTEP+L +Y+SLD AL E GF +V R ++PRH+TV A Sbjct: 31 AVEALFKFPPFFDAAKKNARSMIVKRYESLGGDWEGAMRDLQAQDWEARFKAVEDPAVTYPSYYTQPFHAYSKGNLCWEAALEVTMAAQSVHALVMDPRGKQLDPNGDARLRSSYSARIHENMAELGADRSGVRRIVDLGCASGLSSRELLRAFPGAE-VTGVDLSPYFLAVGRYEQERRE----------------------------------------------AAGGRPEALRWVHGAAESTGLAAGGADLVSMCLVAHELPVEATKAIMREAHRLLRPGGVMCIMEMNPASPVFQRIFSNPFAYTAFKSTEPWLQEYISLDMPGALREAGFAQVVTRESTPRHKTVTAL 337
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: D8TUG1_VOLCA (Methyltransf_11 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TUG1_VOLCA) HSP 1 Score: 263 bits (671), Expect = 5.940e-81 Identity = 153/355 (43.10%), Postives = 205/355 (57.75%), Query Frame = 1 Query: 124 ALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSA--DVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGAPAP--KDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPI-NFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 A++ LF+FPPFF A +AR IVKRA LG+DW+ + +Q ++A A + A P YY PFHAY +GNLCW+AALEV +A SVHA + G E + +GD KLR+++ +R L+ L D G + I DLGC+TGLSTL L R FP A +TGVDLSPH++++ R + R ++ +P+ F ++ + ++ AAE T LP S DLV LCLV HELPQGATR I+ EA RVLR GG +A M+M+P S FQR+ NP A+ FKSTEP+L +Y++LD AL + GF V R +PRH+TVVA Sbjct: 66 AVEALFRFPPFFNAAAKNARRMIVKRAEALGLDWEGAMRGMQAQDWEARLKAVTNPAVTYPDYYTQPFHAYGKGNLCWEAALEVTMAAKSVHAAVMDPAGREMDPEGDAKLRASYSARLLQCLSDLGVDPGNIRTITDLGCATGLSTLELMRAFPSADRVTGVDLSPHLIAVGRYEQELR-----QLHAQPVPTFCIH----------------------------AANGGVPEGALTLLHGAAERTPLPAGSQDLVSLCLVCHELPQGATRNIMREAFRVLRPGGVMAVMEMNPQSATFQRIFGNPFAYTAFKSTEPWLQEYITLDMPGALRDAGFAAVVTREATPRHKTVVAL 387
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A150H1D1_GONPE (Methyltransf_25 domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H1D1_GONPE) HSP 1 Score: 258 bits (660), Expect = 4.880e-80 Identity = 150/354 (42.37%), Postives = 200/354 (56.50%), Query Frame = 1 Query: 124 ALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSA--DVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGAPAP--KDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 A++ LFKFPPFF A +AR I+KRA LG+DW+ + +L+ ++A A + A P+YY PFHAY GNLCW+AALEV +A SVHA + G + + +GD +LRS++ +R E L + G IVDLGC+TGLS+L L R FP A +TGVDLSPH L++ + + R AP + V+ AAEATGLP S DLV +CLV HELPQ AT+ I+ EA R+LR GG L M+M+P S FQR+ NP A+ FKSTEP+L +Y++LD ++ E GF RV R ++PRH+TVVA Sbjct: 26 AVEALFKFPPFFNAAAKNARGMIIKRAESLGLDWEGAMRDLKAQDWEARMKAVSNPAVQYPSYYTQPFHAYPSGNLCWEAALEVTMAAKSVHAIVMDPAGKQMDPEGDARLRSSYSARLGECLAELGVDPSGVSRIVDLGCATGLSSLELLRAFPSAA-VTGVDLSPHFLAVGKYEQERRVAANGG---------------------------------------------APEALTLVHGAAEATGLPAGSVDLVSMCLVCHELPQAATKDIMREAFRILRPGGVLCIMEMNPQSAVFQRIFGNPFAYTAFKSTEPWLQEYITLDMPGSMREAGFARVTQRESTPRHKTVVAL 333
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A8J4FAK5_9CHLO (Methyltransf_25 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FAK5_9CHLO) HSP 1 Score: 259 bits (661), Expect = 6.570e-80 Identity = 151/353 (42.78%), Postives = 205/353 (58.07%), Query Frame = 1 Query: 127 LDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSADV--AAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGA-PAP-KDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 ++ LFKFPPFF A +AR+ IVKRA LG+DWD + +++ +DA A + + PAYY PFHAY++GNLC +AALEV +A SVHA + G + + +GD KLR+++ +R E L D G PA +D+VDLGC+TGLS+L L R FP A + G+DLSP+ L++ R + R AP + V+AAAE+T LP S DLV +CLV HELPQ AT+ I+ EA R+LR GG +A M+M+P S FQR+ NP A+ FKSTEP+L +Y++LD AL E GF +V R ++PRH+TVVA Sbjct: 45 VEALFKFPPFFNAAAKNARSMIVKRAEALGLDWDGAMRDMKAQDWDARMKAVINPSVTYPAYYTQPFHAYSQGNLCLEAALEVTMAAKSVHAMVMDPAGKQMDPEGDAKLRASYSARIHECLADLGVDPASFRDVVDLGCATGLSSLELLRAFPGAS-VRGLDLSPYFLALGRYEQEQRQAANGG---------------------------------------------APEALTLVHAAAESTRLPSGSQDLVSVCLVCHELPQAATKDIMREAFRLLRPGGVMAIMEMNPQSATFQRIFGNPFAYTAFKSTEPWLQEYIALDMPGALREVGFSQVRTRESTPRHKTVVAL 351
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A8J4D8F9_9CHLO (Methyltransf_25 domain-containing protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D8F9_9CHLO) HSP 1 Score: 257 bits (657), Expect = 2.320e-79 Identity = 150/354 (42.37%), Postives = 203/354 (57.34%), Query Frame = 1 Query: 124 ALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDALYSADV--AAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENG-EFERDGDDKLRSTFLSRTLEILRDSGAPAP--KDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVAF 1170 A++ LFKFPPF A AR KIVKRA LG+DWD + +++ +DA A + + PAYY PFHAY++GNLC +AALE +A SVHA + G + + +GD KLR ++ +R E L D G A +D+VDLGC+TGLS+L L R FP A +TGVDLSP+ L++ R + R AP + +++ AAE+TGLP S DLV +CLV HELPQ AT+ I+ EA R+LR GG +A M+M+P S +QR+ NP+A+ FKSTEP+L +Y+ LD AL E GF +V R ++PRH+TVVA Sbjct: 44 AVEALFKFPPFSNAAAKIARGKIVKRAEALGLDWDGAMRKMKAQNWDARMKAAINPSVTYPAYYTLPFHAYSQGNLCLEAALEWTMAAKSVHAMVMDPAGKQVDPEGDAKLRDSYSARLHECLADLGVNADSIRDVVDLGCATGLSSLELLRAFPGAA-VTGVDLSPYFLAVGRYEQEQRQ----------------------------------------------ANGGAPEALTFIHCAAESTGLPSGSQDLVSMCLVCHELPQAATKDIMREAFRLLRPGGVMAIMEMNPQSAVYQRIFGNPLAYTAFKSTEPWLQEYIVLDMPGALREAGFGQVRTRESTPRHKTVVAL 350
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A835VU56_CHLIN (Methyltransf_25 domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A835VU56_CHLIN) HSP 1 Score: 256 bits (654), Expect = 7.360e-79 Identity = 148/355 (41.69%), Postives = 200/355 (56.34%), Query Frame = 1 Query: 124 ALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRIQYDA----LYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTENGE-FERDGDDKLRSTFLSRTLEILRDSGAPAPK--DIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATRPDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVA 1167 A++ LF+FPPFF A +AR I+KRA +G+DW + + ELQ ++A + + D+ PAYY PFHAY++GNLCW+AALEV +A SVHA + G+ + GD+ LRS++ +R E L G K IVD G +TGLS+L L R FP A +TG+DLSPH L++ + + R P R+ +V+ AE TGLP S DLV +CLV HELPQ AT+AI+ EA R+LR GGA+ M+M+P S FQR+ NP A+ FKSTEP+L +Y++LD AL E GF V R ++PRH+TVVA Sbjct: 46 AVEALFRFPPFFNAAAKNARGMIMKRAEAIGLDWGSAMAELQAQDWEAQMKEVTNPDITY--PAYYTQPFHAYSQGNLCWEAALEVTMAAKSVHAMVMDPAGKTMDPAGDEALRSSYSARMAESLAQLGVDRSKVKHIVDFGAATGLSSLELLRAFPGAERVTGLDLSPHFLAVGKWEQERRVAAAGG---------------------------------------------QPERLVFVHGLAEDTGLPAGSQDLVSMCLVCHELPQAATKAIIKEAYRILRPGGAMCIMEMNPESAVFQRIFGNPFAYTAFKSTEPWLQEYIALDMPGALREAGFAEVVTRESTPRHKTVVA 353
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Match: A0A0G4GZ14_VITBC (Methyltransf_11 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZ14_VITBC) HSP 1 Score: 256 bits (653), Expect = 1.450e-78 Identity = 150/360 (41.67%), Postives = 202/360 (56.11%), Query Frame = 1 Query: 115 ASAALDKLFKFPPFFETAKNSARTKIVKRAALLGVDWDARVDELQRI------QYDALYSADVAAATPAYYKSPFHAYAEGNLCWQAALEVEPSAISVHANIYTEN-GEFERDGDDKLRSTFLSRTLEILRDSGAPAPKDIVDLGCSTGLSTLALSRTFPDARHITGVDLSPHMLSIARLQLATR--PDLTSSVNFKPINFILNFNFTPRLXXXXXXXXXXXXXXXXXXXXXXXXXRAAPRRIDYVYAAAEATGLPDASADLVCLCLVAHELPQGATRAILAEARRVLRRGGALAFMDMDPLSPAFQRMATNPMAFAGFKSTEPFLLDYVSLDFKAALAETGFERVAIRSNSPRHRTVVA 1167 A+A L+ +FK P A +AR +VKR +G W VD L+R +Y+ L AD+ + P+YY PFHAY EGNL WQAA+E EP+A++VH+ +Y +N + DGD LR F + +L++ G P+ IVD+GCSTGLST+ L TFP A+ ITGVDLSP+M ++ +L R PD A I+Y +AA EATGL D S DLV +CLV HELP A + I EA R+L+ GG+LA MD++P+SP F ++ATNP+ FA F+STEP++ +Y+ +D + E GF V R NSPRHRTVVA Sbjct: 56 ATALLEGIFKVKPIMGFAAANARKMMVKRGESIGYSWSDEVDALKRAKEQLDAEYERLLDADLHSNYPSYYCVPFHAYDEGNLSWQAAMEAEPAAVTVHSPLYGDNPSDLRPDGDRMLRHRFHQEMVVMLKERGGMTPERIVDIGCSTGLSTMKLHETFPTAK-ITGVDLSPYMCAVGAYKLQQRGSPD-------------------------------------------------ALAHIEYRHAAGEATGLADGSVDLVTICLVHHELPTHAAKDIFREAYRLLKPGGSLAVMDVNPVSPTFVKLATNPLFFAAFRSTEPYITEYIQMDIAHEMQEAGFCDVESRENSPRHRTVVA 365 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336594 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12111 ID=mRNA_12111|Name=jgi.p|Trimin1|336594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1211bp|location=Sequence derived from alignment at Contig_84:234253..239101+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAACGCCGTCAAAGAAGCACCTGCTGCTGTTGGGGATGCGCAAACAGTback to top protein sequence of jgi.p|Trimin1|336594 >Trimin1|336594|MIX45357_14_60 ID=Trimin1|336594|MIX45357_14_60|Name=jgi.p|Trimin1|336594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=393bp MNAVKEAPAAVGDAQTVDVLSAESPLAAAQAGNAGFRIASAALDKLFKFPback to top mRNA from alignment at Contig_84:234253..239101+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12111 ID=mRNA_12111|Name=jgi.p|Trimin1|336594|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4849bp|location=Sequence derived from alignment at Contig_84:234253..239101+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_84:234253..239101+ >mRNA_12111 ID=mRNA_12111|Name=jgi.p|Trimin1|336594|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1179bp|location=Sequence derived from alignment at Contig_84:234253..239101+ (Tribonema minus UTEX_B_3156 )back to top |