mRNA_12081 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A836C8G5_9STRA (Gamma-glutamylcyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G5_9STRA) HSP 1 Score: 589 bits (1518), Expect = 1.440e-212 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 1
Query: 1 MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL 888
MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL
Sbjct: 1 MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLVVKPEGTALAGAAVTATEDVTAL 296
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: D7FS26_ECTSI (Gamma-glutamylcyclotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS26_ECTSI) HSP 1 Score: 223 bits (569), Expect = 6.720e-69 Identity = 128/261 (49.04%), Postives = 158/261 (60.54%), Query Frame = 1
Query: 64 LTEGFTPPKMTAASAAPHAAEGITATAAPAEIVTTKVVRTWDADNGVWVGSLEE-EHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQ---------ALLYTGTTDNPNFWLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLS 816
+T+ TPP + A A A ATAAPA WDAD GVWVG + +P PLWIFGYGSLCWRPE S++ +E+ G + G +R+FAQ+SMDHRGTP PGLV TLV D LE+LG R S PS T G Y +P++ + VLA LD REKGGYTR VDV GG +E+ ALLYTGTT NPNF + S +AA IA A GPSG N EYLF+L+ +L G D H++E+ ++V S
Sbjct: 1 MTKTATPP-VPPADATAGGATANPATAAPA---------VWDADAGVWVGDRAAGQEGSVPSPLWIFGYGSLCWRPEASFAGFERFNGEVVGWKRLFAQKSMDHRGTPEFPGLVATLVSDADLEALGQRSASDPPSRTHGVAYLIPENKAEEVLAGLDFREKGGYTRATVDVLPAGGEGGQKEDTTSSEDTAVPTPALLYTGTTSNPNFHVPSIDEAADTIALAVGPSGPNYEYLFSLSQYLEKVGTPDPHLMELSDMVRS 251
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A7S4A4B5_9STRA (Gamma-glutamylcyclotransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4B5_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.190e-55 Identity = 108/208 (51.92%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWLASAAD---AAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
WDA NGV+VG+ +P PLWIFGYGSLCW+ E + EK G ++G R FAQRS DHRGTPAAPGLV T+V D+ L L ++D S G YRV D D + VL DLD REKGGYTR +V V +GG L ALLY GT DNPNF ++ D AA I A GPSG N +YL NLATWL G D HV +
Sbjct: 7 WDAKNGVYVGNRAAGSDDVPSPLWIFGYGSLCWKTE--FPHVEKCTGRVRGLTRYFAQRSQDHRGTPAAPGLVATVVRDEDLVKLALQDEGYTGS-CVGTAYRVADADARQVLDDLDFREKGGYTREVVSVV---HAGGT----LDALLYRGTVDNPNFDASAIKDLDAAALTIKDAVGPSGPNRDYLLNLATWLSEVGEEDAHVAAL 204
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A7S2FBV1_9STRA (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBV1_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.370e-50 Identity = 99/209 (47.37%), Postives = 127/209 (60.77%), Query Frame = 1
Query: 184 WDADNGVWVGSLEEEHH-QLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNF--WLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIE 801
WD GVW G+ + ++P PL IFGYGSLCWRPE S+ + G R FAQRS DHRGTP +PGLV T++ D LE++G+R+ PS T G Y + + + VLADLD REKGGYTR +V V +GG E ++ALLY+ T DNPNF + AA +IA A GPSG+N EYL NL WLRS + + ++E
Sbjct: 32 WDEAAGVWRGNRAVDAGVEVPDPLVIFGYGSLCWRPEPSFGEGASYPCRVSGWGRFFAQRSTDHRGTPKSPGLVATMLSDAQLEAIGLREAGVPPSSTIGMGYEIATESAEGVLADLDFREKGGYTREVVLVQ--PLAGG---EPVKALLYSATPDNPNFDKTMLDPDAAATVIASAVGPSGSNAEYLSNLTEWLRSLEIEEPSLFDLE 235
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: R1C337_EMIHU (Gamma-glutamylcyclotransferase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C337_EMIHU) HSP 1 Score: 172 bits (436), Expect = 7.150e-50 Identity = 99/185 (53.51%), Postives = 117/185 (63.24%), Query Frame = 1
Query: 253 WIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNF---WLASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
WIFGYGSLCWRP+ + E G G R FAQRS DHRGTP++PGLV T++ D LE+ G+R+P PS T G YRV DDV VLA+LD REKGGYTR +V V R G ++AL+Y+ T DNP F LA A AA IA AHGPSGAN +YL +LA WLR G D HV +
Sbjct: 1 WIFGYGSLCWRPD--FPHEETLVGRCSGWGRYFAQRSCDHRGTPSSPGLVATMISDAQLEAKGLREPGEPPSTTCGLCYRVGADDVPRVLANLDFREKGGYTREVVQVQ-PARPGAPP---VRALVYSATCDNPLFSPVMLADPAAAALTIASAHGPSGANRDYLESLAAWLREVGEEDAHVAAL 179
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: F0YJ10_AURAN (Gamma-glutamylcyclotransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ10_AURAN) HSP 1 Score: 166 bits (421), Expect = 2.500e-47 Identity = 104/217 (47.93%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQEEVLQALLYTGTTDNPNFWL------ASAADAAA-IIARAHGPSGANTEYLFNLATWLRSA----GAVDEHVVEIE 801
WDA GV+ + ++P PLWIFGYGSL WRPEE WS Y+ R ++G RR FAQ S DHRG P APGLV TL+ D + + T G YRVPD D AVL DLD REKGGYTR I V D E + AL+Y+ T DNPNF A+A D AA IIA A GPSG N YL NLA L A+ VVE++
Sbjct: 5 WDAAAGVYKNARAASSCEVPNPLWIFGYGSLVWRPEERWSDYDARPCAVRGWRRYFAQLSTDHRGVPGAPGLVCTLLED------------APEATTRGVAYRVPDADADAVLDDLDFREKGGYTRKIARVVFDDG------EAVDALVYSATRDNPNFVQGLDSDDAAAVDKAARIIATAVGPSGDNAAYLLNLADALEGTDPYLAALKARVVELQ 203
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: I7MAH6_TETTS (Gamma-glutamylcyclotransferase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MAH6_TETTS) HSP 1 Score: 156 bits (395), Expect = 1.370e-42 Identity = 88/221 (39.82%), Postives = 126/221 (57.01%), Query Frame = 1
Query: 184 WDADNGVWVGSLEEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHD---RSGGAQEEVLQALLYTGTTDNPNFWL-----ASAADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEHVVEIEEVVLSLV 822
WD + G+W S LP PLWIFGYGSLC++P + E+R G+IK R F Q+S DHRGTP PGLV TL+ ++ ++ G + +G V+R+ + D + VL +LD REKGGY++ I+DV+ D G Q + +QALLY G DNPNF A II+++ GPSG N EYL +L+S VD ++ E+ ++ ++
Sbjct: 48 WDENLGIWKNSKAAGQSTLPDPLWIFGYGSLCYKPGDM-KYVEERNGYIKHYTRRFWQKSCDHRGTPENPGLVCTLLSEEEWQTYGDNYENGI---VYGKVFRIDEKDKEEVLNELDFREKGGYSQIILDVYFQDFDENQSGNQVQKVQALLYKGNVDNPNFLQDKDIRGCIKKQAEIISKSIGPSGKNIEYLIKYYQYLQSIDKVDRYMEELVQLATQVI 264
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A0G4EU07_VITBC (Gamma-glutamylcyclotransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU07_VITBC) HSP 1 Score: 154 bits (389), Expect = 4.210e-42 Identity = 92/215 (42.79%), Postives = 120/215 (55.81%), Query Frame = 1
Query: 184 WDADNGVWVGSLE--EEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVH--CHDRSGGAQEEVLQALLYTGTTDNPNFWLASAADAAAIIARAH------GPSGANTEYLFNLATWLRSAGAVDEHVVEI 798
WD+ GVWVGS ++ +P PLW+FGYGSLCW+ + + E+ GFI+G R F Q SMDHRGTPA+PG VVTLV H S+ + S A G YR+PD+ V+ VL LD+REKGGY+R ++DV C D G + + AL Y G NP + + AH GPSG N EYL+ L +L + D HV E+
Sbjct: 15 WDSTLGVWVGSRARADDSFVVPSPLWLFGYGSLCWKADVPYE--EQFVGFIQGYERKFFQASMDHRGTPASPGRVVTLVKHAHPASVPL---SEAEGLVHGVAYRIPDERVEEVLDALDYREKGGYSRLLLDVTEWCADGKEGGRR--VTALAYCGNETNPAYDAFDDESDEGLQQAAHRIFSSTGPSGPNREYLYRLGDFLEAIKVHDRHVAEL 222
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A482T3C9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C9_9ARCH) HSP 1 Score: 161 bits (408), Expect = 8.130e-42 Identity = 95/222 (42.79%), Postives = 124/222 (55.86%), Query Frame = 1
Query: 181 TWDADNGVWVGSLEEEHHQ--LPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVHCHDRSGGAQE-EVLQALLYTGTTDNPNFWLASA-----------------ADAAAIIARAHGPSGANTEYLFNLATWLRSAGAVDEH 786
TWD++ GVWVGS H+ P PL++FGYGSL WRP E G RR+FAQRS DHRGT PG+V+ LV D LE +G ++ S G V+ VP D VQ V DLD+REKGGY+R + V D + ++ V+QAL+YTG +NPNF+L S + +I+ A GPSG NTEYLF L ++L VD++
Sbjct: 9 TWDSNLGVWVGSRASAIHEEDFPDPLYVFGYGSLIWRPGEFLEPLPSFHCIAHGYRRIFAQRSCDHRGTVEFPGVVLNLVSDGLLEKMGYILDANGDSGCQGLVWLVPQDKVQIVFEDLDYREKGGYSRHFISVVLKDSTPHHEQGSVVQALVYTGGENNPNFYLPSRLVRDRDEYADPFGLMRKSSVVDLISAAMGPSGPNTEYLFRLVSFLEDRQIVDDY 230
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Match: A0A0G4HY76_9ALVE (Gamma-glutamylcyclotransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HY76_9ALVE) HSP 1 Score: 153 bits (387), Expect = 1.410e-41 Identity = 93/223 (41.70%), Postives = 130/223 (58.30%), Query Frame = 1
Query: 184 WDADNGVWVGSL--EEEHHQLPQPLWIFGYGSLCWRPEESWSSYEKRQGFIKGRRRMFAQRSMDHRGTPAAPGLVVTLVPDDHLESLGMRDPSSAPSETFGAVYRVPDDDVQAVLADLDHREKGGYTRCIVDVH-CHDRSGGAQEEVLQALLYTGTTDNPNFWLASAAD-------AAAIIARAHGPSGANTEYLFNLATWLRSAGA----VDEHVVEIEEVV 810
W+++ G+W G +E ++P+PLWIFGYGSLCWR ++ +S EK+ G I+G R F Q S DHRGTP PG V T++P +R + S G YR+ D++ VLA LD REKGGYTR +VDV + G+ E ++A++Y GT DNP + +S D A I +A GPSG N +YL N+AT+L S GA +D H + + + V
Sbjct: 24 WNSELGIWEGGAPPHDEGFEVPKPLWIFGYGSLCWRNDD-FSFVEKKTGKIQGFCRRFFQLSTDHRGTPTFPGRVATVIP--------VRGDQADSSWVVGVAYRIADEEADKVLAYLDFREKGGYTRHLVDVSPLGGQESGSTEGPIRAVMYAGTEDNPAY--SSFPDEGEELEKAVRQIHKAVGPSGPNVDYLRNVATFLHSCGAEAEQLDHHTIGLADAV 235 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171662 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12081 ID=mRNA_12081|Name=jgi.p|Trimin1|171662|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=891bp|location=Sequence derived from alignment at Contig_84:8242..11038- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACTAGGGGATCTAAAGGAATCCTGCTGCCATTGCTTATACTTTCATAback to top protein sequence of jgi.p|Trimin1|171662 >Trimin1|171662|e_gw1.84.85.1 ID=Trimin1|171662|e_gw1.84.85.1|Name=jgi.p|Trimin1|171662|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=297bp MTRGSKGILLPLLILSYCYVSLTEGFTPPKMTAASAAPHAAEGITATAAPback to top mRNA from alignment at Contig_84:8242..11038- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12081 ID=mRNA_12081|Name=jgi.p|Trimin1|171662|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2797bp|location=Sequence derived from alignment at Contig_84:8242..11038- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_84:8242..11038- >mRNA_12081 ID=mRNA_12081|Name=jgi.p|Trimin1|171662|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=891bp|location=Sequence derived from alignment at Contig_84:8242..11038- (Tribonema minus UTEX_B_3156 )back to top |