mRNA_12052 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A835YHM4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHM4_9STRA) HSP 1 Score: 1333 bits (3450), Expect = 0.000e+0 Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 1 Query: 1 MSPYPAHDASLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRCGLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTSMANVLEQLAQMKAKANLTDVMDFAELQVRIKRSWLVPATTDTTSTISGMLSLKDLKIGTRVKGVKVQIVSVGTDKAIKDPRLSWRDVRLEMSGGAGLIVEGDLTWSWRAHQAKDVNDDQLYCGAWYTLAARVKKVIAETRTVWVHHCRLELCDDER 2034 MSPYPAHDASLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRCGLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTSMANVLEQLAQMKAKANLTDVMDFAELQVRIKRSWLVPATTDTTSTISGMLSLKDLKIGTRVKGVKVQIVSVGTDKAIKDPRLSWRDVRLEMSGGAGLIVEGDLTWSWRAHQAKDVNDDQLYCGAWYTLAARVKKVIAETRTVWVHHCRLELCDDER Sbjct: 1 MSPYPAHDASLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRCGLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTSMANVLEQLAQMKAKANLTDVMDFAELQVRIKRSWLVPATTDTTSTISGMLSLKDLKIGTRVKGVKVQIVSVGTDKAIKDPRLSWRDVRLEMSGGAGLIVEGDLTWSWRAHQAKDVNDDQLYCGAWYTLAARVKKVIAETRTVWVHHCRLELCDDER 678
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A6H5L6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G6_9PHAE) HSP 1 Score: 300 bits (769), Expect = 4.850e-92 Identity = 195/448 (43.53%), Postives = 247/448 (55.13%), Query Frame = 1 Query: 28 SLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNI----IVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRP 1353 S AA +T +LRPYQ V+ + LY QGT R+LVP+ATG+GKT VF+H+P AFPEL +RGTLVLVHR+ELV+QA A + L VG+E E + A D VVASVQTLG RRG+G ARLR+ G+V+VDEAHH+ G+Y+ +LNG LG+GS C G+TRGG L+AGFTATP RADG +L PFFD LDL WGI G+LV+I + T +A L R Q DF + LS AVN RNEA RA+ L G E ++ ++ + FC V HAHDLARVL++ + A AVDG ++R + FR+G+++ +TN GV TE GFDAP +T+VM RPT S PL+MQMIGRGTRP Sbjct: 7 SSAAAGSTSVLRPYQSSVIDRAVELYGQGTRRLLVPLATGLGKTVVFTHLPQAFPELCRRGTLVLVHRDELVQQAVASFGKFLPHLSVGVEKGNETAHAGLDVVVASVQTLG-RRGSGA-ARLRKFANYG-GVVVVDEAHHVKAGGMYDDVLNG-----------------LGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQ-------------------------------DFSAGALSTAVNNDVRNEAAARAM---------------LEFGAG-------------EPLSSRKKKSPRGIAFCVDVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTE--------GFDAPSCDTIVMCRPTQSAPLYMQMIGRGTRP 367
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI) HSP 1 Score: 206 bits (524), Expect = 7.570e-55 Identity = 148/381 (38.85%), Postives = 190/381 (49.87%), Query Frame = 1 Query: 535 LGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNI----IVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRP----APGVLDSLYSAEGPMS-AELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTSMANVLEQLAQMKAKA-NLTDVMDFAELQ 1647 LG+GS C G+TRGG L+AGFTATP RADG +L PFFD LDL WGI G+LV+I + T +A L R Q DF + LS AVN RNEA RA+ P S+G G + FCA V HAHDLARVL++ + A AVDG ++R + FR+G+++ +TN GV TE GFDAP+ +T+VM RPT S PL+MQMIGRGTRP P V + + G S A RRS I S KP M ++D+VDNCGKHKV + + LGL F G D + A +E + + A+A +L D AE++ Sbjct: 9 LGVGSACRGETRGGRLLAGFTATPRRADGLSLRPFFDHSIGGLDLHWGIANGYLVDIHAFAVRTTTDIAALPTRMQ-------------------------------DFSAGALSTAVNNDVRNEAAARAMLEFGAGEPSSSGKKKSPRG----------------------------IAFCADVRHAHDLARVLNEHNISAMAVDGGMNKKDRGRALAAFRSGEVSTLTNCGVLTE--------GFDAPYCDTIVMCRPTQSAPLYMQMIGRGTRPWLSPTPQVRPANNADAGADSTASRRRSDIAASPKPRMHVIDLVDNCGKHKVMSMSAALGLSSGFRG-DDAGTDGMGGAFSVEHVGSLAAEAMSLVDADGAAEVE 321
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A2R6Y0D7_9BACL (Uncharacterized protein n=1 Tax=Candidatus Carbobacillus altaicus TaxID=2163959 RepID=A0A2R6Y0D7_9BACL) HSP 1 Score: 170 bits (430), Expect = 1.070e-41 Identity = 145/493 (29.41%), Postives = 211/493 (42.80%), Query Frame = 1 Query: 52 VMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRG--TLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGL 1518 + LRPYQ+E L ++ Y +G R +V +ATG+GKT VFS + L +RG +V+ HR+EL+RQA ++ ++GI ++ E + VVAS+Q+L +R LRQ + +++DEAHH P Y R+ P+ ++ G TATP R D L FD V + GI G+L +I + TDI + DF EL A+NT RN+ +V A +H +DG T+ F A V HA L G+PA AV G TP++ERR+I+ERFR G + V+ N GV TE GFD P V V++ARPT S+ L+ QM+GRGTR +PG K + L+DVVD+ +H++ + ++G+ Sbjct: 13 ITLRPYQEEALSAIEEAYTRGIRRPVVALATGLGKTIVFSEL------LRRRGDTAMVIAHRDELIRQAVEKIRFVIPHAEIGI-VKAEENQKDAQIVVASIQSLHEKR-------LRQWMPDRFATIVIDEAHHAIAPS-YRRVAE----------YFRPD------------------ILLGVTATPFRGDRITLAEVFDDVVYSFGIVDGIRSGYLADIEA---------------------------YRIETDINLDHVRTMAGDFSEKELIQAINTEERNQIVVHAYQHH-----------------ADGKK---------------------TIIFAAGVPHAMQLVDRFRAVGIPADAVFGHTPVQERRSILERFRTGLVPVLVNVGVLTE--------GFDEPSVEAVILARPTKSRVLYTQMVGRGTRLSPG-------------------------KDRLILIDVVDSTTRHRLISISELIGV 364
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A2W6C6V9_9ACTN (ATP-dependent helicase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A2W6C6V9_9ACTN) HSP 1 Score: 161 bits (408), Expect = 4.580e-39 Identity = 155/513 (30.21%), Postives = 208/513 (40.55%), Query Frame = 1 Query: 40 CTATVM-LRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRA-LKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTS 1566 CT + LRPYQ+E L ++A +G R LV + TG GKT VF+ + P A LVL HR+EL+ QA A+LTR GL VG+ ++ ER + VVASVQTL R RL +L V+VDEAHH G Y RIL + GG L+ G TATPDR DG+ L F+ + L + G L + L ++ R + L V DF E A+ E + A +KH R L F +V AH + LS AG+PA A+D +TP +ERRA +ER AG+ V N GV E G+D P ++ VV+ARPT ++ L++QMIGRGTR PG D L ++DV +H + T + GL P + PT+ Sbjct: 3 CTNSAFTLRPYQEETLAAIEAAENRGVRRQLVNLPTGTGKTVVFAELIRRRPGRA----LVLAHRDELIGQAAAKLTRSAPGLSVGV-VKAERDEVGAEVVVASVQTLAQRH------RLERLGTNFT-TVVVDEAHHSAAAG-YLRILGHVHAGEP-----------------------GGPLLVGVTATPDRGDGRGLESVFEEIVFQRSLPEMVAAGFLCD-------LRAIQIRTRADLA--------------------SLHVSHGDFSEGEAGEALMRGRAPELVAEAYVKHAADRR---------------------------------------ALVFTPTVALAHAMTAALSTAGVPAEALDASTPTQERRATLERLHAGETTAVANCGVLIE--------GYDEPAIDCVVIARPTRARSLYVQMIGRGTRRHPGKADCL-------------------------VLDVTGATSRHDLVTLAGLAGLDPEQVTSQGVTEAPTT 380
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A5DIK4_PICGU (Uncharacterized protein n=2 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) TaxID=294746 RepID=A5DIK4_PICGU) HSP 1 Score: 157 bits (396), Expect = 1.090e-36 Identity = 135/446 (30.27%), Postives = 197/446 (44.17%), Query Frame = 1 Query: 37 ACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHV-PSAFPELAKRGT--LVLVHREELVRQA--QAQLTRCGLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRIL---NGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTR 1350 A T+T LR YQ E + + A +G R V +ATG GKT VFSH+ P P + G+ LVL H+EEL++QA + Q L+V I+MR + +++ D +VASV TL R+ RL + +I+DE HH T +N+IL N +T + + V GFTAT +R+DG++L FD + DL I LV++ T + D+ + + D+DS +LS A+N+ N + R+ + +R ++ TL FC + H L VL G+ A V G T ERRAIIE F+ G + V+ N VFTE G D P+++++ +ARPT S+PL +QMIGRG R Sbjct: 20 ASTSTFTLRDYQNEAIDSVLAALNRGVKRPAVVLATGGGKTVVFSHLLPHIKPNVLSGGSKVLVLAHKEELIKQAADKIQFANPHLEVSIDMRRLKPTSTSDVIVASVPTL-IRQ-----TRLEKYNPDEFKAIILDECHHATARS-WNKILHYFNADTPNSDI-------------------------AVIGFTATMERSDGQSLGAMFDEIVFERDLLTMIKNEELVDVRFSTIDV---------------------------DVDLNSVAIKNNDYDSVDLSRAMNSFDVNLLVARSYSELRKRYSFAS-----------------------------------TLIFCVDINHCKTLCGVLQSQGINAQYVTGETAKHERRAIIEDFKNGTINVLCNVQVFTE--------GTDIPNIDSLFLARPTKSRPLLVQMIGRGLR 363
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A1W1VSQ2_9THEO (Helicase conserved C-terminal domain-containing protein n=2 Tax=Thermanaeromonas TaxID=202949 RepID=A0A1W1VSQ2_9THEO) HSP 1 Score: 154 bits (388), Expect = 3.350e-36 Identity = 152/499 (30.46%), Postives = 203/499 (40.68%), Query Frame = 1 Query: 58 LRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRCG--LKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRA-LKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKD 1545 LR YQ+E + + + Y G R LV + TG GKT VF+++ +L TLVL HR+ELVRQA + VGI E D V+ASVQTL RL + G ++VDEAHH P Y R+ + LG GG G L+ G TAT R DG L F+ + + I G+LV++ L R Q + + T+ G DF EL +NT RNE +V+A L+H R +A+A F A V+HA DLA D G+ A V G P ER ++ RF AG + VVTN GV TE G D P + ++MARPT S+ L+MQM+GRG R PG D L ++DV DNC ++ T ++ G+ G D Sbjct: 4 LRDYQQEAVNAVVSEYRNGVTRQLVVIPTGGGKTVVFAYIA----KLLGYPTLVLAHRDELVRQAADKFGMVWPEASVGIVKAQEDDHQGRDVVIASVQTLSREE------RLSRFSPERFGFLVVDEAHHAVAP-TYLRVFD-----------------RLGF---MGGDP--GKLLLGVTATGFRGDGIGLGRVFEKITFQRSVIALIRAGYLVDV-------KALAVRSQ--------------------VDISEVTIRGGDFGEKELGFILNTPTRNEMVVKAYLEHAAGR-----------------------------RAIA----------FTADVQHAKDLAAAFRDCGVEAEPVWGEMPYSERVEVLRRFAAGKVRVVTNCGVLTE--------GVDIPATDCIIMARPTRSRVLYMQMLGRGLRLYPGKEDCL-------------------------VIDVCDNCARNDALTLPTLFGVESARDGLLD 370
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A0F9S4V7_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9S4V7_9ZZZZ) HSP 1 Score: 147 bits (372), Expect = 5.010e-34 Identity = 145/537 (27.00%), Postives = 223/537 (41.53%), Query Frame = 1 Query: 58 LRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGTLVLVHREELVRQAQAQLTRC-GLKVGIEMRGERSSA----SDDAVVASVQTLGYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAA-VDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPGVLDSLYSAEGPMSAELRRSAIDKSHKPWMRLVDVVDNCGKHKVKTAGSVLGLHPLFFGRKDGDSTPTSMANVLEQLAQMKAKANLTDVMDFAELQV 1650 LR YQ + LQ + + Q +LV +ATG+GKT + SH+ + L K ++L HREEL+ QA L R G++ EM +++ D VV ++QT RG G + R+ + ++I+DE HH Y R++ + ++ + TATPDRAD KAL F D+V DL G+ G LV I + +++ ++ I+ + G+D A V + M T + + G TL F AS E A + +L+ +A V G TP EERR + + AG+ + N G+ TE G+D P V VVMARPT S+ L QM+GRGTR P +++ A+ R+ AI S K + ++D V NCG+HK+ T +LG G+ + D + N + AQ ++ + ++ AE Q+ Sbjct: 3 LRDYQAKALQGIHDQFEQNDSTLLV-LATGLGKTVIVSHLVKDY--LDKGRIMMLAHREELIGQAWRTLKRVTGIEPDTEMGDYHANSYGAFRSDIVVGTIQTQNAGRGMG-LKRMTKFDPSDFSLLIIDEGHHAAAAS-YRRVIEYYQRNPKLKVIY-------------------------LTATPDRADEKALGQFIDSVAYEYDLREGVDDGWLVPITQQS---------------------VYVDGLDYSSIRTTAGDLNGKDL----------------ARVLEFEEMLHGFCSPT----IEIAGDKK-----------------------TLIFAASCEQASRMTEILNRHKTGSARYVHGGTPKEERRELWPAYTAGEFQYLVNVGITTE--------GWDEPSVEVVVMARPTKSRSLMAQMLGRGTRALPNLIEDCAGADA------RKLAIAGSDKSELLVLDFVGNCGRHKLITPPDILG------GKYEDDIVDRAKKNAEKDSAQSGIPVDVIEQLELAEKQL 425
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A167PHV4_9PEZI (Dead deah box DNA helicase n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A167PHV4_9PEZI) HSP 1 Score: 148 bits (373), Expect = 1.200e-33 Identity = 137/440 (31.14%), Postives = 184/440 (41.82%), Query Frame = 1 Query: 52 VMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAF--PELAKRGTLVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTL--GYRRGAGGMARLRQLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDTDTLACLRRRGQTTLRCSGPAFLFLPFPSHTDI-KVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTR 1350 ++LR YQ++ ++ + A +G R+ + +ATG GKT +F+ + P TL+L HR ELV QA T+ G V IEM +S + D VASVQ+L G R +R + +V+VDEAHH+ PG Y R L G+ SK + G + G +AT R DG AL D + D + G L ++ LF S D+ +VR G+DF + +LS AVNT A NE VR A A TL FC V H DL R G+ A V G T ER A ++ F+ G V+ N GVFTE G D P+V+ VV+ARPT S+ L +QMIGRG R Sbjct: 39 LLLRDYQEDCIRSVLASLDRGQKRVGISLATGAGKTVIFTQLLDRVRPPGPGATQTLILAHRRELVEQAARHCTQAYPGKTVEIEMGALHASGAADVTVASVQSLTSGTRLAKFAASRFK--------LVLVDEAHHIVAPG-YMRAL-----------------AHFGLDSKAASQRAGAPALVGVSATFSRFDGLALGAAIDEIVYHRDYIDMMGAGWLSHV-------------------------LFTTVESTADLSRVRSGGGLGKDFQTGDLSRAVNTPAVNEVTVRTWL-----------------------------------AKAAAAGRRATLVFCVDVRHVVDLTRAFRAHGVDAQYVTGDTDKAERSARLDAFKQGAFPVLVNCGVFTE--------GTDLPNVDCVVLARPTKSRNLLVQMIGRGLR 384
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Match: A0A5E8BPF5_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BPF5_9ASCO) HSP 1 Score: 145 bits (367), Expect = 9.360e-33 Identity = 136/458 (29.69%), Postives = 199/458 (43.45%), Query Frame = 1 Query: 22 DASLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMGKTTVFSHVPSAFPELAKRGT--LVLVHREELVRQAQAQLTRC--GLKVGIEMRGERSSASDDAVVASVQTLGYRRGAGGMARLR--QLVERPPGIVIVDEAHHMTEPGLYNRILNGETNSQAVRAVLTPEAFELGMGSKCGGKTRGGALVAGFTATPDRADGKALTPFFDAVCAPLDLAWGILGGHLVNIIVDT-----DTLACLRRRGQTTLRCSGPAFLFLPFPSHTDIKVRGSTVGGRDFDSAELSAAVNTSARNEAIVRALKHMPQRLPPSTGVHHLTLGGSDGXXXXXXXXSTAEQAMAQLERPTCTLCFCASVEHAHDLARVLSDAGMPAAAVDGTTPLEERRAIIERFRAGDLAVVTNFGVFTEVHITNVQQGFDAPHVNTVVMARPTMSQPLFMQMIGRGTRPAPG 1362 D+SL + + LR YQ E +++ +A G +RI V +ATG GKT +FSH+ S +G+ L+LVHR EL QA+ + R LKV IEM E + D +VASV TL + + RL Q + ++IVDEAHH P Y +IL TPE VAGF+AT R DG +L D V + I G L ++ + T D L + S + K++ + G D++S LS +NT+ NE +V+ K + LE+ TL FC ++HA DLA + + A + TP ER AI++RF+ + V+ N + TE G D P+++ +++ RPT S+ L +QM+GRG R PG Sbjct: 48 DSSLTQNSHKISLRSYQNECIKECLESFANGKNRIAVSLATGSGKTVIFSHLLSQITPQPGQGSCVLILVHRRELATQARDTVQRVCPHLKVQIEMGKECADVDADVIVASVPTLTTK----SLKRLEYPQFDPKRFKLIIVDEAHHAAAP-TYLKILK-------FFGAGTPETK---------------IYVAGFSATFSRLDGLSLKSAMDHVVYHRSMMEMIKDGFLSDLRLTTIKASYDLQPLLDEENAKWEEQERQRLMTNTLKSPSIRKIKPPSKRG-DYNSGLLSKILNTNEINELVVKIWKRIC------------------------------------LEKYLSTLIFCVDIKHAEDLATKFQEHNISAEYISSKTPDGERAAILKRFKNRETPVLINCAILTE--------GTDIPNIDAIMLLRPTRSESLLVQMVGRGLRLHPG 433 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338840 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12052 ID=mRNA_12052|Name=jgi.p|Trimin1|338840|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2037bp|location=Sequence derived from alignment at Contig_93:326497..339735+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGCCTTACCCAGCGCACGATGCATCGCTTGCTGCTTGCACGGCCACback to top protein sequence of jgi.p|Trimin1|338840 >Trimin1|338840|MIX47603_5_13 ID=Trimin1|338840|MIX47603_5_13|Name=jgi.p|Trimin1|338840|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=679bp MSPYPAHDASLAACTATVMLRPYQKEVLQQMKALYAQGTHRILVPMATGMback to top mRNA from alignment at Contig_93:326497..339735+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12052 ID=mRNA_12052|Name=jgi.p|Trimin1|338840|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13239bp|location=Sequence derived from alignment at Contig_93:326497..339735+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_93:326497..339735+ >mRNA_12052 ID=mRNA_12052|Name=jgi.p|Trimin1|338840|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2037bp|location=Sequence derived from alignment at Contig_93:326497..339735+ (Tribonema minus UTEX_B_3156 )back to top |