mRNA_12051 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|172483
Unique NamemRNA_12051
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A835YH63_9STRA (Nucleoside phosphatase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH63_9STRA)

HSP 1 Score: 622 bits (1605), Expect = 1.150e-225
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 1 
Query:    1 AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVDTFNGLAPHERMLRVMTAALAPKVQGTTVEVGDKFNSEFNLLDAVDGDARMVRLTAPTGELAYFPMHPRDAETGM 903
            AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVDTFNGLAPHERMLRVMTAALAPKVQGTTVEVGDKFNSEFNLLDAVDGDARMVRLTAPTGELAYFPMHPRDAETGM
Sbjct:    1 AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVDTFNGLAPHERMLRVMTAALAPKVQGTTVEVGDKFNSEFNLLDAVDGDARMVRLTAPTGELAYFPMHPRDAETGM 301
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A835YPX1_9STRA (Nucleoside phosphatase GDA1/CD39 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPX1_9STRA)

HSP 1 Score: 313 bits (803), Expect = 3.300e-104
Identity = 145/220 (65.91%), Postives = 180/220 (81.82%), Query Frame = 1 
Query:    1 AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLR 660
            AHG+IIDAGSGGSR+HV++W  R F S PPPIS+P S N W  RL PGISSYA+HP D+G+ L+PL++FAK ILKDHE++++K+P+YLRAT GMRQL   +R  ++D IR +L   E PF+FEY + RV++GEEEG+Y WAA+NFL+G LL  S G+GTA S  TVGALDMGGASTQI+FFR DQDIMSNLFKLQ+G+QKHWNVY HSFL FGEA+ ++R
Sbjct:   41 AHGMIIDAGSGGSRLHVFRWGSRQFDSAPPPISYPFSNNDWCNRLRPGISSYADHPQDVGQSLKPLVDFAKTILKDHEEDWHKYPIYLRATAGMRQLEPTKRVAVLDAIRDYLGGPECPFHFEYHYVRVLAGEEEGVYGWAAVNFLRGDLLPSSDGAGTAASASTVGALDMGGASTQISFFRPDQDIMSNLFKLQIGSQKHWNVYTHSFLGFGEAAMRMR 260
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A835Z3X5_9STRA (Nucleoside phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X5_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.840e-103
Identity = 156/238 (65.55%), Postives = 192/238 (80.67%), Query Frame = 1 
Query:    4 HGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVDTFNGLAPHERML 717
            HGL+IDAGSGGSR+HVY+W+ R+F +LPP +S P S N+WT RL PGISS+A+ P  +GE L+ LI+FAK  LK H+++++K P+ L AT GMRQLP A+R  +M  IR +L+    PFYFE  FARV+SGEEEGI+AWA INFL+G+LLL+S G+G A S+ TVGALDMGGAS QIAFFR DQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEA+ +LR+ Q+ VD +NGL  HER +
Sbjct:   34 HGLLIDAGSGGSRLHVYRWKKRIFETLPPSVSHPLSHNSWTARLRPGISSFADDPEGVGESLQVLIDFAKEQLKKHKEDWHKMPIALGATAGMRQLPPAKRRAVMAAIRDYLHGPNCPFYFEDYFARVISGEEEGIFAWAGINFLRGNLLLESEGAGLAVSHETVGALDMGGASAQIAFFRSDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEAAMRLRLLQSLVDAYNGLHAHERSM 271
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A835ZFV4_9STRA (Nucleoside phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV4_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.500e-101
Identity = 151/192 (78.65%), Postives = 171/192 (89.06%), Query Frame = 1 
Query:   10 LIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQ 585
            +IIDAGSGGSRMHVY W PRLF +LPPPISFPES N WTGR SPGISSYA+HP DIGEHL PLI+FA +IL D + +F+KFP++L+ATGGMRQLP AQR  IM  IR +LY ++ PFYFE+++ARV+SGEEE IYAWAAINFL+GHLLLDSGG+GTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQ
Sbjct:    1 MIIDAGSGGSRMHVYTWSPRLFDTLPPPISFPESSNAWTGRFSPGISSYADHPEDIGEHLGPLIDFAIDILADKKGDFWKFPIFLKATGGMRQLPFAQRDAIMTAIRQYLYGDDCPFYFEFEYARVISGEEESIYAWAAINFLRGHLLLDSGGAGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQ 192
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: D7FI36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI36_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.710e-91
Identity = 145/236 (61.44%), Postives = 179/236 (75.85%), Query Frame = 1 
Query:    1 AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEES-PFYFEYDFARVVSGEE-------EGIYAWAAINFLKGHLLLDSGGSGTANS--NVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACV 678
            AHG+IIDAGS GSRMHVYQWEPR+F +LPPPIS P S N WT R+ PGISSY  H  DI E L PL++FAK+ILKD+E+++ +FP+YL+AT G+RQLP   R  ++  +R FL + E+ PFYF++D ARV+SGEE       EGIY WAA+NFL+G LL  S G GTA S  N+TVG LD+GGASTQI+FF+ DQDI++NLFKLQ+GA+KHWNVY HSFL FG  S + RM    V
Sbjct:   33 AHGMIIDAGSSGSRMHVYQWEPRMFTTLPPPISIPGSTNQWTHRMEPGISSYITHLEDIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLPYGDREALLSAVRDFLGNPETCPFYFQFDHARVISGEERLRAFLQEGIYGWAAVNFLRGELLALSEGVGTAVSSGNMTVGTLDLGGASTQISFFKSDQDILANLFKLQIGAEKHWNVYTHSFLQFGLNSARARMHTKVV 268
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A7S1TZX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZX0_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.130e-90
Identity = 133/227 (58.59%), Postives = 169/227 (74.45%), Query Frame = 1 
Query:    4 HGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEES-PFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVD 681
            HG+IIDAGS GSRMHVYQW PRLF+ +PPP++FP++ + WT R +PG+S+    P  +GE L PL+EFAKN+LKD  D ++ +P+YL+ATGGMR+LP   R ++M  +R +L    + PFYF  DFARV+SGEEE IY W A+NFL G LL  + G GTA  N T GALD+GGASTQI+FFR DQD+++NLFKLQ+G QKHWNVY HSFLYFG  S + R  +   D
Sbjct:   49 HGMIIDAGSTGSRMHVYQWAPRLFSEIPPPLTFPKTNSRWTERQAPGLSTLGLDPDAVGEALFPLVEFAKNVLKDKADRWHNYPIYLKATGGMRELPNNLREQVMGWVRAYLEDNSTCPFYFRRDFARVISGEEEAIYGWTAVNFLMGTLLPQTAGLGTAEPNTTWGALDLGGASTQISFFRPDQDVLANLFKLQIGDQKHWNVYAHSFLYFGRHSARDRFLEGLAD 275
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A7S1XQJ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQJ9_9STRA)

HSP 1 Score: 285 bits (728), Expect = 3.270e-88
Identity = 133/227 (58.59%), Postives = 169/227 (74.45%), Query Frame = 1 
Query:    4 HGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEES-PFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVD 681
            HG+IIDAGS GSRMHVYQW PRLF+ +PPP++FP++ + WT R +PG+S+    P  +GE L PL+EFAKN+LKD  D ++ +P+YL+ATGGMR+LP   R ++M  +R +L    + PFYF  DFARV+SGEEE IY W A+NFL G LL  + G GTA  N T GALD+GGASTQI+FFR DQD+++NLFKLQ+G QKHWNVY HSFLYFG  S + R  +   D
Sbjct:   49 HGMIIDAGSTGSRMHVYQWAPRLFSEIPPPLTFPKTNSRWTERQAPGLSTLGLDPDAVGEALFPLVEFAKNVLKDKADRWHNYPIYLKATGGMRELPNNLREQVMGWVRAYLEDNSTCPFYFRRDFARVISGEEEAIYGWTAVNFLMGTLLPQTAGLGTAEPNTTWGALDLGGASTQISFFRPDQDVLANLFKLQIGDQKHWNVYAHSFLYFGRHSARDRFLEGLAD 275
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: W7TQ28_9STRA (Ectonucleoside triphosphate diphosphohydrolase 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ28_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.010e-87
Identity = 136/227 (59.91%), Postives = 173/227 (76.21%), Query Frame = 1 
Query:    4 HGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEES-PFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVD 681
            HGLIIDAGS GSRMHVYQW+ R F ++PPP SFP + N WT RL+PGIS++A+ P ++G  L  LI FA+ +L   E  F  FP+YL+ATGGMRQL  ++R  I+D +R ++ ++ + PFYFE+DFARVVSGEEEGIY W AINFL G LL  S G+GT ++N +VGALD+GGAS QI+FF  DQDI++N+FKLQ+GAQKHWNVYVHSFLYFG  S + R+     +
Sbjct:  123 HGLIIDAGSTGSRMHVYQWDARRFDTVPPPFSFPLTSNRWTNRLAPGISAFADCPQNVGTSLDSLISFAREVLAGKEHQFKYFPIYLKATGGMRQLSPSKREAIIDEVRKYMMNKTTCPFYFEHDFARVVSGEEEGIYGWTAINFLLGKLLPASAGTGTVDANSSVGALDLGGASAQISFFVPDQDILANMFKLQIGAQKHWNVYVHSFLYFGINSARDRLHDTLTE 349
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: A0A7S3H9R1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9R1_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.630e-76
Identity = 121/231 (52.38%), Postives = 159/231 (68.83%), Query Frame = 1 
Query:    1 AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGISSYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSE-ESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGTANS-NVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFGEASTKLRMQQACVDTF 687
            + G++IDAGSGGSR+HVY WEPR+F + PPP+SFP     WT R SPGI+++A+    I  HL PL+ FAK+ LKD  D F  FP+Y  ATGGMRQL   +R +I++ +R FL ++ + PF+F+ +FARV+SGEEE I++WAA NFL G LL  S G G  +  N T G +D+GGASTQIA+F   QDI+  L+K Q+G QK WNVY  SFL FG  S + R     VD++
Sbjct:   42 SRGIVIDAGSGGSRLHVYSWEPRIFKTSPPPLSFPNGNEKWTARRSPGIAAFADDINGIAGHLAPLMAFAKDALKDRADQFGDFPIYFYATGGMRQLSSKKREKIINAVRKFLKNDIQCPFFFKNEFARVISGEEEAIFSWAATNFLMGTLLPASAGEGVVSGVNSTYGTIDLGGASTQIAYFLPSQDILEGLYKFQIGNQKIWNVYTKSFLQFGIVSARQRHITGLVDSY 272
[Close]
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Match: B7FV38_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FV38_PHATC)

HSP 1 Score: 231 bits (590), Expect = 9.240e-68
Identity = 120/227 (52.86%), Postives = 155/227 (68.28%), Query Frame = 1 
Query:    4 HGLIIDAGSGGSRMHVYQWEPRLF--------ASLPPPISFPESRNTWTGRLSPGISSYAEHPWD-----IGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIR-WFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHLLLDSGGSGT-ANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQKHWNVYVHSFLYFG 639
            HG +IDAGS GSRMH+Y+WEPR+         A     +SFP +R+ WT RL PG+SS+ + P D     IGE+LRPL++FA+ +L   +++F  FP++LRAT GMR L    R RIM  +R  F  S   PF F  + ARV+SGEEE I+ W  +NFL G+LL  S G+GT +N  +T GALD+GG STQI F+ Q++DIMSNLFKLQ+G  KHWNVY HSFLY+G
Sbjct:  112 HGFMIDAGSTGSRMHIYEWEPRVLRDADDIQAAVSGEKLSFPGTRSRWTDRLRPGLSSFGDLPDDQLQGAIGEYLRPLLDFARTVLHSKQEHFKNFPIFLRATAGMRTLQPNDRLRIMQAVRSLFTNSTYCPFAFVDEQARVLSGEEEAIFDWTGVNFLMGNLLDQSRGAGTVSNPKLTHGALDLGGGSTQIGFYEQNEDIMSNLFKLQIGQAKHWNVYAHSFLYYG 338
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|172483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YH63_9STRA1.150e-225100.00Nucleoside phosphatase family-domain-containing pr... [more]
A0A835YPX1_9STRA3.300e-10465.91Nucleoside phosphatase GDA1/CD39 (Fragment) n=1 Ta... [more]
A0A835Z3X5_9STRA1.840e-10365.55Nucleoside phosphatase family-domain-containing pr... [more]
A0A835ZFV4_9STRA1.500e-10178.65Nucleoside phosphatase family-domain-containing pr... [more]
D7FI36_ECTSI2.710e-9161.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TZX0_9STRA2.130e-9058.59Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XQJ9_9STRA3.270e-8858.59Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TQ28_9STRA2.010e-8759.91Ectonucleoside triphosphate diphosphohydrolase 4 n... [more]
A0A7S3H9R1_9STRA1.630e-7652.38Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
B7FV38_PHATC9.240e-6852.86Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:321687..324366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|172483|e_gw1.93.74.1
Description8-oxo-dGTP phosphohydrolase activity
COG categoryGO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5371@1|root,KOG1386@2759|Eukaryota
Evalue4.44e-92
Seed ortholog2880.D7FI36
Hectar predicted targeting categoryother localisation
TranscriptId172805
TrackFilteredModels1
ProteinId172483
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172483gene_12051Tribonema minus UTEX_B_3156 geneContig_93 321687..324366 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|172483Trimin1|172483|e_gw1.93.74.1Tribonema minus UTEX_B_3156 polypeptideContig_93 321687..324366 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12051_3exon_12051_3Tribonema minus UTEX_B_3156 exonContig_93 321687..322007 -
exon_12051_2exon_12051_2Tribonema minus UTEX_B_3156 exonContig_93 322951..323206 -
exon_12051_1exon_12051_1Tribonema minus UTEX_B_3156 exonContig_93 324038..324366 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12051CDS_12051Tribonema minus UTEX_B_3156 CDSContig_93 324038..324366 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12051 ID=mRNA_12051|Name=jgi.p|Trimin1|172483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=906bp|location=Sequence derived from alignment at Contig_93:321687..324366- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGCACGGCCTCATCATCGACGCCGGCAGCGGCGGCTCGCGCATGCACGT
GTACCAGTGGGAGCCGCGCCTCTTTGCGTCGCTCCCCCCGCCCATCTCCT
TCCCCGAGAGCCGCAACACGTGGACGGGCCGGCTGAGCCCGGGCATATCG
TCCTACGCGGAGCACCCCTGGGACATTGGCGAGCACCTGCGGCCGCTGAT
AGAGTTTGCCAAGAACATACTGAAGGACCACGAGGACAATTTCTACAAGT
TCCCGCTGTACCTGAGGGCGACGGGGGGGATGCGCCAGCTGCCCGTGGCG
CAGCGCGCGCGCATCATGGATCACATCAGGTGGTTCCTGTACAGCGAAGA
GAGCCCGTTCTACTTTGAGTACGACTTTGCGCGAGTCGTGTCCGGCGAAG
AGGAAGGCATCTACGCGTGGGCCGCCATCAACTTCCTCAAGGGCCACCTG
CTGCTCGACTCGGGCGGCAGCGGCACGGCGAATTCAAACGTAACTGTCGG
CGCGCTGGACATGGGCGGCGCTTCCACGCAGATTGCGTTCTTCCGCCAGG
ACCAGGATATCATGAGCAACCTCTTCAAGCTGCAGGTCGGCGCGCAGAAG
CACTGGAACGTCTACGTCCACTCCTTCCTGTACTTCGGGGAGGCCTCCAC
CAAGCTGCGCATGCAGCAGGCGTGCGTCGATACCTTCAACGGCCTCGCGC
CGCACGAGCGCATGCTGCGCGTGATGACCGCCGCCCTCGCGCCCAAAGTT
CAGGGCACTACAGTTGAAGTTGGTGACAAATTTAACTCTGAGTTCAACTT
GCTGGACGCCGTCGACGGCGACGCGCGCATGGTGCGCCTCACGGCGCCCA
CGGGGGAGCTCGCGTACTTCCCCATGCACCCGCGCGATGCGGAGACAGGT
ATGTGA
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protein sequence of jgi.p|Trimin1|172483

>Trimin1|172483|e_gw1.93.74.1 ID=Trimin1|172483|e_gw1.93.74.1|Name=jgi.p|Trimin1|172483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=302bp
AHGLIIDAGSGGSRMHVYQWEPRLFASLPPPISFPESRNTWTGRLSPGIS
SYAEHPWDIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVA
QRARIMDHIRWFLYSEESPFYFEYDFARVVSGEEEGIYAWAAINFLKGHL
LLDSGGSGTANSNVTVGALDMGGASTQIAFFRQDQDIMSNLFKLQVGAQK
HWNVYVHSFLYFGEASTKLRMQQACVDTFNGLAPHERMLRVMTAALAPKV
QGTTVEVGDKFNSEFNLLDAVDGDARMVRLTAPTGELAYFPMHPRDAETG
M*
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mRNA from alignment at Contig_93:321687..324366-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12051 ID=mRNA_12051|Name=jgi.p|Trimin1|172483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2680bp|location=Sequence derived from alignment at Contig_93:321687..324366- (Tribonema minus UTEX_B_3156 )
GCGCACGGCCTCATCATCGACGCCGGCAGCGGCGGCTCGCGCATGCACGT
GTACCAGTGGGAGCCGCGCCTCTTTGCGTCGCTCCCCCCGCCCATCTCCT
TCCCCGAGAGCCGCAACACGTGGACGGGCCGGCTGAGCCCGGGCATATCG
TCCTACGCGGAGCACCCCTGGGACATTGGCGAGCACCTGCGGCCGCTGAT
AGAGTTTGCCAAGAACATACTGAAGGACCACGAGGACAATTTCTACAAGT
TCCCGCTGTACCTGAGGGCGACGGGGGGGATGCGCCAGCTGCCCGTGGCG
CAGCGCGCGCGCATCATGGATCACATCAGGTGCGGCGCGCACCGGGCGCA
GACCCCCCCTTGGGGCGCCATGTTGTTGATAGTTTTGCCCACTTTCTTTT
GTTTGATTCAGCAGGGTTTTTTGTGGTGCACCACTGAGCGGCCTAAGCAG
TTGCTGGGGGTCCGTGGTTGTAAGAACTTGACACAGTTTCTTGTGTTTGG
TTCAACAGGGGTTTTGTGGTGCTTCAGTGAGCTCAAGTTCGAGCGGCCTG
AGCAAGTACAGATCGCACAAAGTCGCCTCCTGCGATGCGGGCCAGCGCTG
CACCCGTCATGGGCCACATCAGGTGCGGCGCTTCTCGCTGCGAGCCCGTG
GCTTCTTATGCTGCGCATTTGGTGGCGTGTTGACATGGTGTTCCAATGGG
TCTTCCATGCATGAGGTGCAGGTGTGCGACCTGGATATCTGCAGGTCAGT
CAGCCACCTCGGGCCAGTGGAGCAGTGCAGCAGGCATCATACCTGGTACC
GTTTGTGTTACATTCATATTGTATGCATATGTCTCTCAGGTGGCTTCCTT
TACAGCGACGAGAGCCCGTTCAACTTCGATACGACTTTGCACGCTCTTCC
CTTGCCCCCCCCCCCCACCCCTGTGCCCCATGTCCCAGGTGGTTTCTATA
CAGCGACGAAAGCCCAATCTACTTTGAGTACGACTTTGCGCGCGTGAGGT
CCGGCGAAGAGGAAGGCATTTACGCGTGGGCCGCCATCAACTTCACATCT
CTATACTGTAATCCATACCAGTATGGTATGCTACTACTAGTGCATAACAG
TGCTCATGCGTATACTGAGGCAGCCCCCCCCCCCTTCCTCCCCCACGCGC
CGTCCCCCAGGTGGTTCCTGTACAGCGAAGAGAGCCCGTTCTACTTTGAG
TACGACTTTGCGCGAGTCGTGTCCGGCGAAGAGGAAGGCATCTACGCGTG
GGCCGCCATCAACTTCCTCAAGGGCCACCTGCTGCTCGACTCGGGCGGCA
GCGGCACGGCGAATTCAAACGTAACTGTCGGCGCGCTGGACATGGGCGGC
GCTTCCACGCAGATTGCGTTCTTCCGCCAGGACCAGGATATCATGAGCAA
CCTCTTCAAGCTGCAGGTGGGCAATGCGTCTGCTGCTCCTTTATGCAAGC
TGCTCCGTAAATATATATACCTCGAAGTATATTTTTTTGAGTGACAGTTC
ATATAGTTGTAGTCGCAATTGAACATAGGCGGCGCGTTTAGGCGAATTGG
GGTTCTTCCGCCAGGATCAGGACATCATGAGCAACCTCTTCAAGCTGCAG
GTGAGCGCGTGTGTGCTACTCTTTACGGGCTGCTCCGTAAATATATACGT
GGATGTGCTTCGAAATGCAATCAATGTAACTGTCGGCGGGCTGGACATGG
CCAGCACGTCCATGCCTTGTTTCCGTGAGGTCTGCATGGAGCATTATGCC
GTAGGGGCGATGCCACATGGATGGCCACTGTGGAGCTGGTCAGCGGCGGC
ATCAAGCATGCATGTTGCTGAGTAAGGTGCGTTGGGTAGCCAGCCCTCCA
TGAGCGTGTGCTGTACCTGCAGGCACACTTCTTAATTTTCAGAGCTTTTT
ACACACCCGACAAAGCATCACCACTCTGTTTGATTACACTCATCGTCAAT
GGCACATCCGCAATGTACACGCCAATGCAGATCGGCAGAAGCACCAAAAC
GCGTACGTCCACTCCCTACTGTACTTGCGCCCATGCACAGCTGGCACTGT
GCTGGTGGTGTGCCAAGCTGTGCATATGTGCATCTATTAACACAGAAATA
CACGTGCAAGACCAGCTGTTTCATCCATTTTCGCGACGCAAGAATGTGAC
ACGAGTGCGTCCGCGGTGTGCGCGCCACCGCAGGTCGGCGCGCAGAAGCA
CTGGAACGGCTGCACTCACTCCCTACTGTACTTGAGCGAGACCGTTGTCC
GGTTGTGTATGCCGTGCATGGATGCACACACGAACATATGCGCAAGACCA
GCTGTTATATCGCGACGCGAGGTGACACAAGTGCGTCTGCGGCGTGCTTG
TCACTGCAGGTCGGCGCGCAGAAGCACTGGAACGTCTACGTCCACTCCTT
CCTGTACTTCGGGGAGGCCTCCACCAAGCTGCGCATGCAGCAGGCGTGCG
TCGATACCTTCAACGGCCTCGCGCCGCACGAGCGCATGCTGCGCGTGATG
ACCGCCGCCCTCGCGCCCAAAGTTCAGGGCACTACAGTTGAAGTTGGTGA
CAAATTTAACTCTGAGTTCAACTTGCTGGACGCCGTCGACGGCGACGCGC
GCATGGTGCGCCTCACGGCGCCCACGGGGGAGCTCGCGTACTTCCCCATG
CACCCGCGCGATGCGGAGACAGGTATGTGA
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Coding sequence (CDS) from alignment at Contig_93:321687..324366-

>mRNA_12051 ID=mRNA_12051|Name=jgi.p|Trimin1|172483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=906bp|location=Sequence derived from alignment at Contig_93:321687..324366- (Tribonema minus UTEX_B_3156 )
GCGCACGGCCTCATCATCGACGCCGGCAGCGGCGGCTCGCGCATGCACGT
GTACCAGTGGGAGCCGCGCCTCTTTGCGTCGCTCCCCCCGCCCATCTCCT
TCCCCGAGAGCCGCAACACGTGGACGGGCCGGCTGAGCCCGGGCATATCG
TCCTACGCGGAGCACCCCTGGGACATTGGCGAGCACCTGCGGCCGCTGAT
AGAGTTTGCCAAGAACATACTGAAGGACCACGAGGACAATTTCTACAAGT
TCCCGCTGTACCTGAGGGCGACGGGGGGGATGCGCCAGCTGCCCGTGGCG
CAGCGCGCGCGCATCATGGATCACATCAGGTGGTTCCTGTACAGCGAAGA
GAGCCCGTTCTACTTTGAGTACGACTTTGCGCGAGTCGTGTCCGGCGAAG
AGGAAGGCATCTACGCGTGGGCCGCCATCAACTTCCTCAAGGGCCACCTG
CTGCTCGACTCGGGCGGCAGCGGCACGGCGAATTCAAACGTAACTGTCGG
CGCGCTGGACATGGGCGGCGCTTCCACGCAGATTGCGTTCTTCCGCCAGG
ACCAGGATATCATGAGCAACCTCTTCAAGCTGCAGGTCGGCGCGCAGAAG
CACTGGAACGTCTACGTCCACTCCTTCCTGTACTTCGGGGAGGCCTCCAC
CAAGCTGCGCATGCAGCAGGCGTGCGTCGATACCTTCAACGGCCTCGCGC
CGCACGAGCGCATGCTGCGCGTGATGACCGCCGCCCTCGCGCCCAAAGTT
CAGGGCACTACAGTTGAAGTTGGTGACAAATTTAACTCTGAGTTCAACTT
GCTGGACGCCGTCGACGGCGACGCGCGCATGGTGCGCCTCACGGCGCCCA
CGGGGGAGCTCGCGTACTTCCCCATGCACCCGCGCGATGCGGAGACAGGT
ATGTGA
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