mRNA_11988 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA) HSP 1 Score: 766 bits (1977), Expect = 5.620e-278 Identity = 399/400 (99.75%), Postives = 399/400 (99.75%), Query Frame = 1 Query: 1 MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGGXGSSPK 1200 MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGG GSSPK Sbjct: 1 MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGGGGSSPK 400
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2YT17_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT17_9STRA) HSP 1 Score: 414 bits (1064), Expect = 1.180e-137 Identity = 223/378 (58.99%), Postives = 271/378 (71.69%), Query Frame = 1 Query: 55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLAR--AGLGAEEGLAPPA-------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143 FTVLGIE+SCDDTGAAVVRSDG ILGEALASQQ+IHE+WGGVVPGLAR+AH +ID +V+ AL AGM+SAA+VDA+ VTVGPGLEICLRVG KA LA E+ KPFV +HHLEAH+++AR + + EE L FPF ALLVSGGHCQ++ C GVG ++ILGGT DD+LGEAFDK ARLLGLP GGGGGPAVE AR G+ A LPIP+ +++D +FSYAGLK + R ER E + LPD AD+AASFQH AI H+EQR++ + A G+RTLAVVGGVAAN ++R RL +C++ E AW M VPP +LCTD G M AW+A+ER+ G S+ A+ QEV+AR P Sbjct: 126 FTVLGIESSCDDTGAAVVRSDGVILGEALASQQEIHEQWGGVVPGLARDAHQEQIDSVVSQALTNAGMSSAAEVDAIGVTVGPGLEICLRVGSTKAIQLASEYQKPFVGIHHLEAHILMARLPSSISNEEELIHITATEDTHASTRAIEFPFFALLVSGGHCQMMRCSGVGNYTILGGTTDDSLGEAFDKTARLLGLPVGGGGGPAVESLAREGNRTAIDLPIPLRYRRDYDFSYAGLKTAVRKAAERLATEHNVETSDKLPDSVKADIAASFQHRAIQHIEQRLKYGMEAMEAEGIRTLAVVGGVAANTELRTRLERMCSSREE-------AWTMFVPPPKLCTDQGAMSAWAAIERIMMGSSDEASTQEVFARYPF 496
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: W7TQK2_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQK2_9STRA) HSP 1 Score: 411 bits (1056), Expect = 8.930e-136 Identity = 238/403 (59.06%), Postives = 275/403 (68.24%), Query Frame = 1 Query: 55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLAR--------------AGLGAEEGLAPPA-FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALC-----AAAGERDGE-----------GGGA---------WRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143 FTVLGIETSCDDTG AVVRSDG ILGEALASQ IHE+WGGVVPGLAR+AH + ID +V AL +AGMAS A+V AV VTVGPGLEICLRVG E AKALA KPFVAVHHLEAH ++AR AG A + P FPFLALLVSGGHC LL C GVGR+ LGGT+DDALGEA+DK ARLL + TG GGPA+ER AR G+P+A LP+PM KK++NFSYAGLKN+FRM V R + L L + ADLAASFQH AI HLE+R+ A+ RGV TLAVVGGVA+N +RARL LC A E++ E GGG W +VVPP RLCTDNGVMVAW+A+E+LR G S+ G++V+AR P Sbjct: 148 FTVLGIETSCDDTGVAVVRSDGVILGEALASQYKIHEQWGGVVPGLARDAHASVIDSMVEEALKKAGMASVAEVGAVGVTVGPGLEICLRVGTETAKALATTFHKPFVAVHHLEAHCLMARFGQPLDSREPKEEAAGTSASSPIPPQTRFPFLALLVSGGHCMLLECWGVGRYRTLGGTLDDALGEAYDKAARLLKIGTGAAGGPAMERLAREGNPKAVVLPVPMRGKKNLNFSYAGLKNAFRMAVTRLKEALNLGEEEDFDPKTKADLAASFQHVAIQHLEERLTLAMKESERRGVHTLAVVGGVASNQAIRARLQVLCEKRSLARRLEKEQERIWDEANSENKGGGTMEVEAPLPPWELVVPPPRLCTDNGVMVAWAAIEKLRLGYSDVVEGRDVHARWPF 550
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S4J610_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J610_9STRA) HSP 1 Score: 409 bits (1052), Expect = 1.310e-135 Identity = 224/379 (59.10%), Postives = 272/379 (71.77%), Query Frame = 1 Query: 52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGL-APPA------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR--GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143 PFTVLGIE+SCDDTGAAVVRSDG ILGEALASQ +IHE+WGG+VPGLAR AH +ID I+ AL AGM+S VDA+ VTVGPGLEICLRVGC KA+ LA ++ KPFV +HHLEAH+++AR G + L PA FPFLALLVSGGHCQLL C +G++SILGGT+DD+LGEAFDK ARLLGLP GGGGGPAVE AR GDP+A LPIP+ +KD +FSYAGLK + R+ E+ E L + L A++AASFQ+ AI H+EQR+ RA++ G+R+LAVVGGVAAN+++R+RL ++C E W M VPP RLCTD G M AW+A+ER+ G S+ A GQEVYAR P Sbjct: 150 PFTVLGIESSCDDTGAAVVRSDGVILGEALASQHEIHEEWGGIVPGLARTAHEEKIDGIIHEALQNAGMSSVEDVDAIGVTVGPGLEICLRVGCNKARDLAEKYGKPFVGIHHLEAHILMARLPYGDSDDLFISPATEDMHEAARAIEFPFLALLVSGGHCQLLKCLDIGKYSILGGTMDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGDPKAVKLPIPLQRRKDCDFSYAGLKTAVRIAAEKLVKERELESIDELSRDDKANIAASFQNVAIRHIEQRLERAMSMMETEEDGIRSLAVVGGVAANSELRSRLESICTNRSEP-------WNMFVPPPRLCTDQGSMSAWAAIERIVVGSSDKAEGQEVYARYPF 521
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A1Z5K725_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K725_FISSO) HSP 1 Score: 400 bits (1027), Expect = 1.240e-132 Identity = 217/368 (58.97%), Postives = 262/368 (71.20%), Query Frame = 1 Query: 55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR-GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQI 1155 FTVLGIE+SCDDTGAAVVRSDGTILGEALASQ IH WGGVVPGLA+EAH EIDRIV AL AGM SAA VDA+ VTVGPGLEICLRVG KA+ALA+E+ KPFV VHHLEAH+++AR L + FPFLALLVSGGHCQLL C G+G ++LGGT DD+LGEA+DK ARLLGLP GGGGGP VER AR GDP PL +P+ +KD++FSY+GLK++ R ER E + A L A++AASFQH AI H+EQR+RRA+ + +R+LA+VGGVAAN +R R+ LC +W + +PP RLCTD G M AW+AVER+R ++ +VYAR P ++ Sbjct: 112 FTVLGIESSCDDTGAAVVRSDGTILGEALASQSHIHAPWGGVVPGLAKEAHEAEIDRIVQEALEAAGMTSAADVDAIGVTVGPGLEICLRVGATKARALAIEYQKPFVGVHHLEAHILMAR--LPYDSASKQLEFPFLALLVSGGHCQLLKCTGIGDMAVLGGTFDDSLGEAYDKTARLLGLPVGGGGGPVVERLAREGDPTTIPLSVPLQSRKDLDFSYSGLKSNVRRVAERLAKEQGVETPADLSHSIKANIAASFQHVAIQHVEQRLRRAMILLEEKENIRSLALVGGVAANQVLRTRIEGLCRKR---------SWDLWIPPPRLCTDQGTMSAWAAVERMRVQSTDDPTIPDVYARYPFAQKL 468
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S1Z3R7_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3R7_9STRA) HSP 1 Score: 397 bits (1021), Expect = 2.620e-131 Identity = 216/384 (56.25%), Postives = 270/384 (70.31%), Query Frame = 1 Query: 52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLG-------------AEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCH-------ARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143 PF VLGIE+SCDDTGAAVVRSDG ILGE+LASQ DIHE+WGGVVPGLA+ AH +ID ++ AL A + + ++VDA+ VTVGPGLEICLRVGCE+AK LAL + KPFV VHHLEAH+++AR G E + +FPFLALLVSGGHCQL+ C G+GR+SI+GGT+DD+LGEAFDK ARLLGLP GGGGGPAVE A+ GDP++ LPIP+ +KD +FSYAGLK + RM ++ R E L + L A++AASFQ+ AI H+EQR+ RA+ +++LAVVGGVAAN ++R+RL +C + +W M VPP RLCTD G M AW+A+ER+ G S+ A GQEVYAR P Sbjct: 121 PFVVLGIESSCDDTGAAVVRSDGVILGESLASQHDIHEEWGGVVPGLAKTAHEEKIDLVIEEALQNANL-TMSEVDAIGVTVGPGLEICLRVGCERAKDLALRYKKPFVGVHHLEAHILMARLPFGNLERVEVQPATEEVHEAVHAMSFPFLALLVSGGHCQLMKCLGIGRYSIIGGTIDDSLGEAFDKTARLLGLPVGGGGGPAVEALAKEGDPKSIQLPIPLQRRKDCDFSYAGLKTAVRMAADKLRLERGLESIDDLCRQDKANIAASFQNVAIRHIEQRLNRAMDMIENEQEEEGGEKIQSLAVVGGVAANLELRSRLEKVC-------DDRSTSWNMFVPPPRLCTDQGSMSAWAAIERIMVGSSDQADGQEVYARFPF 496
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2RZ45_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZ45_9STRA) HSP 1 Score: 392 bits (1007), Expect = 5.370e-130 Identity = 212/380 (55.79%), Postives = 271/380 (71.32%), Query Frame = 1 Query: 52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARA------------GLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARG-VRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQ 1152 PFTVLGIE+SCDDTGAAVVRSDG ILGE+LASQ IHE+WGGVVPGLA+ AH +ID ++ A+ AG++S ++DA+ VTVGPGLEICLRVGC KA+ LA++ KPFVA+HHLEAH+++AR + + E FPFLALLVSGGHCQ+L C GVGR+SI+GGT+DD+LGEA+DK ARLLGLP GGGGGPA+E A+ GDP+A LPIP+ +KD +FSYAGLK + R T E+ E +++ L A++AASFQ+ AITH+EQR++RA+ ++TLAVVGGVAAN ++R+RL LC +W+M VPP RLCTD G M AW+A+ERL S++ Q+V+AR P Q Sbjct: 70 PFTVLGIESSCDDTGAAVVRSDGVILGESLASQHKIHEEWGGVVPGLAKLAHEEKIDVVIEEAIQNAGLSSIDEIDAIGVTVGPGLEICLRVGCNKARELAIQFQKPFVAIHHLEAHILMARLPPQKKEQQSTSIDIVSHESNCAIQFPFLALLVSGGHCQMLKCLGVGRYSIIGGTIDDSLGEAYDKTARLLGLPIGGGGGPAIEALAKEGDPKAVKLPIPLQKRKDFDFSYAGLKTAVRTTAEKLCIERNVTSIVELSHQDRANIAASFQNVAITHIEQRLKRAMDLLENDDQIKTLAVVGGVAANQELRSRLETLCTDQ---------SWQMFVPPPRLCTDQGSMSAWAAIERLMVCSSDSPENQKVHARFPFQQQ 440
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA) HSP 1 Score: 395 bits (1014), Expect = 5.970e-130 Identity = 217/395 (54.94%), Postives = 266/395 (67.34%), Query Frame = 1 Query: 52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPA--------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAG---ERDGEGGG---------AWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIA 1158 PFTVLGIETSCDDTG AVVRSDG ILGEA+ Q DIH +WGGVVP LA +AH + I V AL +AG+ S A VDA+ VTVGPGLE+CLRVG AKALALEH PFV VHHLEAH ++AR L PP +PFLALLVSGGHCQLLL EG GR+S++GGT+DDALGEA+DK ARLLG+ G GGGP +E AR GDP + P+ +PM+ +K +FS+AGLKN+FRM AE + + L + ADLAASFQH AI HLE R++RA+ C R + LA+VGGVAAN ++R R+ ALC +R +W++ VPP RLCTDNGVMVAW+A+ERL+ GVS++ +V+ R PLG +A Sbjct: 114 PFTVLGIETSCDDTGVAVVRSDGAILGEAVVGQADIHAEWGGVVPNLAMDAHKSAIQSTVQLALERAGLKSPADVDAIGVTVGPGLEVCLRVGAGAAKALALEHRLPFVGVHHLEAHCLMARI---PSSPLVPPTPYQDQKELVEDELVYPFLALLVSGGHCQLLLVEGAGRYSVVGGTLDDALGEAYDKAARLLGISVGIGGGPVLEALARGGDPESVPMTVPMLQRKGCDFSFAGLKNAFRMAANNKAAEFNVEDASLLEEPVKADLAASFQHTAIKHLEHRLKRAMQICEDRNIYNLAIVGGVAANQEIRERIQALCEKRSLILKRKASRSADPPPDFHCESWKLFVPPPRLCTDNGVMVAWAAIERLKLGVSDSPLENDVFPRWPLGKALA 505
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: K0T4A1_THAOC (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4A1_THAOC) HSP 1 Score: 392 bits (1006), Expect = 4.640e-129 Identity = 213/370 (57.57%), Postives = 264/370 (71.35%), Query Frame = 1 Query: 52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPA-----FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR-GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143 PF VLGIE+SCDDTGAA++RSDG ILGE+LASQ IHE+WGGVVPGLA+ AH IDR+V +L +AGM VDA+ VTVGPGLEICLRVGCEKAK LA+++ KPFV VHHLEAH+++AR + P FPFLALLVSGGHCQ+L C G+G ++ILGGT+DD+LGEAFDK ARLLGLP GGGGGPAVE AR G+P++ LP+P+ ++DM+FSYAGLK + R+ E+ E + + L A++AASFQ+ + H+E R+ RA+ G+ TLAVVGGVAAN ++R+RL LC +RD W M VPP RLCTD G M AW++VERL G S+ A G EVYAR P Sbjct: 128 PFCVLGIESSCDDTGAAIIRSDGVILGESLASQHSIHEEWGGVVPGLAKTAHEQNIDRVVNESLQRAGM-QIQDVDAIGVTVGPGLEICLRVGCEKAKELAIQNKKPFVGVHHLEAHILMARLPKDHNQTDQPAEDRSMEFPFLALLVSGGHCQILKCIGIGSYTILGGTLDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGNPKSVKLPVPLQKRRDMDFSYAGLKTAVRLAAEKICVERGVESPDRLSHQDKANIAASFQNVSFKHVEVRLGRAMDKVQREDGISTLAVVGGVAANKELRSRLEVLCT---DRDHR----WEMHVPPPRLCTDQGAMSAWASVERLAVGSSDVAEGHEVYARYPF 489
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2IUQ1_9EUKA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IUQ1_9EUKA) HSP 1 Score: 386 bits (992), Expect = 8.660e-129 Identity = 216/348 (62.07%), Postives = 258/348 (74.14%), Query Frame = 1 Query: 118 GTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHA-----------RG-VRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEV 1125 GTILGEALASQ +HE WGGVVPGLAR+AHV +DR+V+ AL +A M+SA +VDAVAVTVGPGLEICLRVGCE AK LAL H KPFV +HHLEAHV++AR G A FPFL LL SGGHCQLLLC GVG+ +++G T+DDALGEAFDKVARLLGLP GGGGGPA+E AR GDP A LP+PM +KK+ +FS+AGLK + R+ VERA ++ S+ AD+AASFQHAA +HLEQR+R A+A+C A +G VRTL V GGVAAN ++R RL ALC + G G W++VVPP RLCTDNGVMVAW+AVE++R G S+ A GQEV Sbjct: 1 GTILGEALASQAALHEDWGGVVPGLARDAHVEALDRVVSEALRRANMSSADEVDAVAVTVGPGLEICLRVGCEGAKELALRHDKPFVGIHHLEAHVLMARLAAGP----ASVPFPFLTLLTSGGHCQLLLCTGVGKHAVIGSTLDDALGEAFDKVARLLGLPIGGGGGPALEALARTGDPNAIKLPVPMRNKKNFDFSFAGLKTAVRLAVERAPEDVRSSSSFH------ADVAASFQHAAFSHLEQRLRYAMAYCAAPQGAGEQGAEVQGTVRTLVVSGGVAANQELRTRLQALCDSTAAPGGSGE-PWQLVVPPPRLCTDNGVMVAWAAVEQMRSGQSHEAEGQEV 337 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1384bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGGAGGACGTAGGGGAGGATCCCGAGATGCCATTTGGCGGCGACGGback to top protein sequence of jgi.p|Trimin1|336417 >Trimin1|336417|MIX45180_160_70 ID=Trimin1|336417|MIX45180_160_70|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQback to top mRNA from alignment at Contig_83:484718..487219+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2502bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_83:484718..487219+ >mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1203bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )back to top |